Appendix 1. List of candidate genes in the mapped QTL intervals (for Chapter 3) Chromosome Gene Gene PFAM Gene Name Name Start (bp) End (bp) ID PFAM Description Glyma01g21480 Gm01 26542533 26543925 Glyma01g21500 Gm01 26596310 26599861 PF02617 ATP -dependent Clp protease adaptor protein ClpS Glyma01g21510 Gm01 26672736 26675940 PF01490 Transmembrane transporter protein Glyma01g21530 Gm01 26738538 26739700 Glyma01g21540 Gm01 26740712 26741148 Glyma01g21570 Gm01 26771298 26774049 Glyma01g21580 Gm01 26814404 26816960 Glyma01g21590 Gm01 26883579 26885938 Glyma01g21620 Gm01 26918445 26921076 Glyma01g21660 Gm01 27034015 27042113 PF08154 NLE (NUC135) domain Glyma01g21680 Gm01 27083934 27086891 Glyma01g21710 Gm01 27124069 27134363 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Glyma01g21900 Gm01 27377291 27379907 PF00249 Myb-like DNA-binding domain Glyma01g22120 Gm01 27654312 27655883 PF00096 Zinc finger, C2H2 type Glyma01g22160 Gm01 27743828 27745095 PF06351 Allene oxide cyclase Glyma01g22170 Gm01 27746482 27751523 PF00557 Metallopeptidase family M24 Glyma01g22180 Gm01 27781684 27784987 Glyma01g22200 Gm01 27830233 27835386 PF00665 Integrase core domain Glyma01g22250 Gm01 27953045 27958686 PF00098 Zinc knuckle Glyma01g22260 Gm01 27963671 27965271 PF00847 AP2 domain Glyma01g22470 Gm01 28104987 28116904 PF08263 Leucine rich repeat N-terminal domain Glyma01g22480 Gm01 28151479 28153189 PF01501 Glycosyl transferase family 8 Glyma01g22490 Gm01 28188838 28194453 PF00069 Protein kinase domain Glyma01g22500 Gm01 28205868 28206470 PF08137 DVL family Glyma01g22510 Gm01 28236528 28241614 PF02365 No apical meristem (NAM) protein Glyma01g22530 Gm01 28337014 28340169 PF00010 Helix-loop-helix DNA-binding domain Glyma01g22580 Gm01 28513352 28526490 Glyma01g22600 Gm01 28536124 28539838 PF04502 Family of unknown function (DUF572) Glyma01g22610 Gm01 28541133 28543329 Glyma01g22620 Gm01 28543695 28552570 Glyma01g22630 Gm01 28591512 28595227 PF00395 S -layer homology domain Glyma01g22650 Gm01 28639532 28642787 PF03188 Eukaryotic cytochrome b561 Glyma01g22670 Gm01 28699816 28704230 PF02668 Taurine catabolism dioxygenase TauD, TfdA family Glyma01g22680 Gm01 28708220 28714469 PF09532 DFDF motif Glyma01g22690 Gm01 28719098 28719831 PF04588 Hypoxia induced protein conserved region

101 Glyma01g22710 Gm01 28767074 28773420 PF02370 M protein repeat

Glyma01g22730 Gm01 28778276 28780308 PF00560 Leucine Rich Repeat Glyma01g22800 Gm01 28928541 28929437 PF04759 Protein of unknown function, DUF617

Glyma01g22830 Gm01 28986440 28987891 PF00293 NUDIX domain Glyma01g22840 Gm01 28991278 29004595 PF00311 Phosphoenolpyruvate carboxylase Glyma01g22850 Gm01 29076423 29082166 PF00005 ABC transporter Glyma01g22880 Gm01 29149920 29152076 PF00195 Chalcone and stilbene synthases, N-terminal domain Glyma01g22910 Gm01 29193664 29195557 Glyma01g22990 Gm01 29393584 29399494 PF03105 SPX domain Glyma01g23000 Gm01 29418211 29420480 Glyma01g23010 Gm01 29421451 29425787 PF05180 DNL zinc finger Glyma01g23040 Gm01 29470049 29471348 Glyma01g23060 Gm01 29472005 29481398 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Glyma01g23140 Gm01 29566975 29574565 PF00702 haloacid dehalogenase-like hydrolase Glyma01g23150 Gm01 29661017 29664579 PF01985 CRS1 / YhbY (CRM) domain Glyma01g23180 Gm01 29699126 29704099 PF00069 Protein kinase domain Glyma01g23210 Gm01 29809811 29812258 Glyma01g23230 Gm01 29844044 29846090 PF00010 Helix -loop-helix DNA-binding domain Glyma01g23240 Gm01 29852640 29862710 PF02992 Transposase family tnp2 Glyma01g27910 Gm01 37406846 37408224 PF12171 Zinc-finger double-stranded RNA-binding Glyma01g27970 Gm01 37458238 37460664 PF00230 Major intrinsic protein Glyma01g28020 Gm01 37580204 37582157 PF03754 Domain of unknown function (DUF313) Glyma01g28030 Gm01 37586845 37588009 PF03754 Domain of unknown function (DUF313) Glyma01g28040 Gm01 37594370 37596192 PF03754 Domain of unknown function (DUF313) Glyma01g28050 Gm01 37611773 37612250 PF03754 Domain of unknown function (DUF313) Glyma01g28310 Gm01 37913486 37916989 PF01490 Transmembrane amino acid transporter protein Glyma01g28370 Gm01 38010119 38011348 PF00415 Regulator of chromosome condensation (RCC1) repeat Glyma01g28430 Gm01 38199990 38200250 Glyma01g28440 Gm01 38205729 38207108 PF03140 Plant protein of unknown function Glyma01g28460 Gm01 38222787 38224224 PF03151 Triose-phosphate Transporter family Glyma01g28480 Gm01 38248792 38250334 PF03140 Plant protein of unknown function Glyma01g28500 Gm01 38308111 38309077 Glyma01g28510 Gm01 38309817 38310877 PF04488 Glycosyltransferase sugar-binding region containing DXD motif Glyma01g28520 Gm01 38386556 38390939 PF00686 Starch binding domain Glyma01g28550 Gm01 38422859 38424428 Glyma01g28780 Gm01 38596195 38598267 PF03140 Plant protein of unknown function Glyma01g28800 Gm01 38660940 38662321 PF03140 Plant protein of unknown function Glyma01g28810 Gm01 38692765 38695543 PF00504 Chlorophyll A-B binding protein Glyma01g28820 Gm01 38704215 38707247 PF00505 HMG (high mobility group) box Glyma01g28830 Gm01 38709420 38713188 PF01174 SNO glutamine amidotransferase family Glyma01g28850 Gm01 38758938 38772974 PF08240 Alcohol dehydrogenase GroES-like domain Glyma01g28880 Gm01 38811591 38819072 PF08240 Alcohol dehydrogenase GroES-like domain 102

Glyma01g28890 Gm01 38826851 38827930 PF00153 Mitochondrial carrier protein Glyma01g28990 Gm01 39088684 39091078 PF00560 Leucine Rich Repeat

Glyma01g29030 Gm01 39116800 39121119 PF08263 Leucine rich repeat N-terminal domain Glyma01g29150 Gm01 39250124 39254309 PF01661 Macro domain Glyma01g29170 Gm01 39261009 39265108 PF01453 D-mannose binding lectin Glyma01g29190 Gm01 39285280 39288636 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Glyma01g29280 Gm01 39350741 39358076 PF06694 Plant nuclear matrix protein 1 (NMP1) Glyma01g29320 Gm01 39388637 39393857 PF07727 Reverse transcriptase (RNA-dependent DNA polymerase) Glyma01g29330 Gm01 39403482 39412095 PF11721 Di-glucose binding within endoplasmic reticulum Glyma01g29350 Gm01 39423614 39425636 PF00560 Leucine Rich Repeat Glyma01g29360 Gm01 39444496 39457477 PF11721 Di-glucose binding within endoplasmic reticulum Glyma01g29380 Gm01 39507360 39516548 PF11721 Di-glucose binding within endoplasmic reticulum Glyma01g29410 Gm01 39591691 39594871 PF00638 RanBP1 domain Glyma01g29420 Gm01 39597825 39602930 PF00557 Metallopeptidase family M24 Glyma01g29470 Gm01 39787264 39797465 PF00962 Adenosine/AMP deaminase Glyma01g29480 Gm01 39799586 39801212 PF00477 Small hydrophilic plant seed protein Glyma01g29540 Gm01 39848415 39850992 PF00462 Glutaredoxin Glyma01g29570 Gm01 39880350 39882773 PF00560 Leucine Rich Repeat Glyma01g29580 Gm01 39899398 39902123 PF00560 Leucine Rich Repeat Glyma01g29600 Gm01 39918096 39921140 Glyma01g29620 Gm01 39936348 39938843 PF00560 Leucine Rich Repeat Glyma01g29630 Gm01 39945843 39949387 PF11960 Domain of unknown function (DUF3474) Glyma01g29670 Gm01 39989086 39990898 Glyma01g29720 Gm01 40031423 40032823 PF07712 Stress up-regulated Nod 19 Glyma01g29760 Gm01 40078051 40079897 Glyma07g15510 Gm07 15309155 15310277 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Glyma07g15520 Gm07 15310738 15314106 Glyma07g15530 Gm07 15315578 15316109 PF03208 PRA1 family protein Glyma07g15550 Gm07 15317893 15323056 PF00085 Thioredoxin Glyma07g15560 Gm07 15324888 15326660 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase Glyma07g15570 Gm07 15329261 15331503 PF00436 Single-strand binding protein family Glyma07g15580 Gm07 15333050 15334866 Glyma07g15590 Gm07 15343294 15347668 PF02386 Cation transport protein Glyma07g15610 Gm07 15354437 15355703 Glyma07g15620 Gm07 15359544 15363678 PF07496 CW -type Zinc Finger Glyma07g15640 Gm07 15378857 15384296 PF02362 B3 DNA binding domain Glyma07g15650 Gm07 15392741 15396175 PF00582 Universal stress protein family Glyma07g15670 Gm07 15406402 15410480 Glyma07g15680 Gm07 15412063 15414305 PF08263 Leucine rich repeat N-terminal domain Glyma07g15690 Gm07 15423677 15427806 PF08414 Respiratory burst NADPH oxidase Glyma07g15700 Gm07 15429199 15432060 PF01125 G10 protein 103

Glyma07g15710 Gm07 15434762 15435958 PF00046 domain Glyma07g15720 Gm07 15441826 15448343 PF04922 DIE2/ALG10 family

Glyma07g15730 Gm07 15448908 15451424 PF02150 RNA polymerases M/15 Kd subunit Glyma07g15750 Gm07 15460834 15470441 PF03283 Pectinacetylesterase Glyma07g15760 Gm07 15471201 15473936 PF01535 PPR repeat Glyma07g15780 Gm07 15477240 15480002 PF00481 Protein phosphatase 2C Glyma07g15790 Gm07 15484142 15484795 Glyma07g15800 Gm07 15490532 15491544 PF01439 Metallothionein Glyma07g15810 Gm07 15497230 15501156 PF00225 Kinesin motor domain Glyma07g15820 Gm07 15515207 15521092 PF00249 Myb-like DNA-binding domain Glyma07g15840 Gm07 15528978 15543370 PF00643 B-box zinc finger Glyma07g15850 Gm07 15553575 15556527 PF00249 Myb-like DNA-binding domain Glyma07g15890 Gm07 15586231 15589697 PF00069 Protein kinase domain Glyma07g15910 Gm07 15612661 15616781 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel Glyma07g15920 Gm07 15631223 15634256 PF01694 Rhomboid family Glyma07g15930 Gm07 15649297 15653554 PF01237 Oxysterol-binding protein Glyma07g15940 Gm07 15658959 15662391 PF00249 Myb-like DNA-binding domain Glyma07g15950 Gm07 15683191 15686232 PF03514 GRAS family transcription factor Glyma07g15960 Gm07 15689000 15694949 Glyma07g16010 Gm07 15712409 15714312 Glyma07g16020 Gm07 15722954 15726379 PF00702 haloacid dehalogenase-like hydrolase Glyma07g16030 Gm07 15744375 15745450 Glyma07g16040 Gm07 15750032 15752879 PF03106 WRKY DNA -binding domain Glyma07g16050 Gm07 15776306 15776816 Glyma07g16060 Gm07 15781881 15785894 PF07732 Glyma07g16070 Gm07 15787681 15791694 Glyma07g16080 Gm07 15793130 15796255 PF07732 Multicopper oxidase Glyma07g16100 Gm07 15834887 15836094 Glyma07g16120 Gm07 15865052 15869571 PF11708 Pre -mRNA splicing Prp18-interacting factor Glyma07g16130 Gm07 15870561 15871432 Glyma07g16170 Gm07 15911060 15916015 PF02362 B3 DNA binding domain Glyma07g16190 Gm07 15923870 15927442 PF03171 2OG-Fe(II) oxygenase superfamily Glyma07g16210 Gm07 15933251 15934880 PF00314 Thaumatin family Glyma07g16230 Gm07 15940208 15944502 Glyma07g16250 Gm07 15946529 15947728 Glyma07g16260 Gm07 15950527 15952852 PF00139 Legume lectin domain Glyma07g16270 Gm07 15959970 15962116 PF00139 Legume lectin domain Glyma07g16280 Gm07 15980027 15981295 PF11961 Domain of unknown function (DUF3475) Glyma07g16290 Gm07 15986430 15986964 PF00096 Zinc finger, C2H2 type Glyma07g16300 Gm07 16005374 16006805 PF00096 Zinc finger, C2H2 type Glyma07g16310 Gm07 16014946 16018219 PF00106 short chain dehydrogenase 104

Glyma07g16320 Gm07 16022876 16024480 PF00106 short chain dehydrogenase Glyma07g16340 Gm07 16039128 16043218 PF00106 short chain dehydrogenase

Glyma07g16390 Gm07 16060213 16061404 Glyma07g16400 Gm07 16066951 16078950 PF00415 Regulator of chromosome condensation (RCC1) repeat Glyma07g16410 Gm07 16087720 16090377 Glyma07g16420 Gm07 16137826 16138557 Glyma07g16440 Gm07 16144513 16149848 PF00069 Protein kinase domain Glyma07g16450 Gm07 16165469 16168663 PF00069 Protein kinase domain Glyma07g16490 Gm07 16182780 16185719 PF02330 Mitochondrial glycoprotein Glyma07g16500 Gm07 16187034 16188915 PF00248 Aldo/keto reductase family Glyma07g16510 Gm07 16191550 16197989 Glyma07g16530 Gm07 16211067 16213937 PF05056 Protein of unknown function (DUF674) Glyma07g16560 Gm07 16253549 16255085 Glyma07g16610 Gm07 16320464 16322025 Glyma07g16630 Gm07 16328333 16332300 PF03208 PRA1 family protein Glyma07g16640 Gm07 16339876 16344008 PF11891 Domain of unknown function (DUF3411) Glyma07g16660 Gm07 16357140 16358037 Glyma07g16680 Gm07 16369847 16370533 PF04759 Protein of unknown function, DUF617 Glyma07g16690 Gm07 16372264 16376537 PF01221 Dynein light chain type 1 Glyma07g16730 Gm07 16411007 16414389 PF00153 Mitochondrial carrier protein Glyma07g16740 Gm07 16417167 16424144 PF07690 Major Facilitator Superfamily Glyma07g16750 Gm07 16448427 16448986 Glyma07g16760 Gm07 16457513 16460168 Glyma07g16770 Gm07 16461981 16463673 PF00234 Protease inhibitor/seed storage/LTP family Glyma07g16790 Gm07 16472185 16476173 PF03759 PRONE (Plant-specific Rop nucleotide exchanger) Glyma07g16800 Gm07 16479810 16481083 PF02798 Glutathione S-transferase, N-terminal domain Glyma07g16810 Gm07 16488159 16489519 PF02798 Glutathione S-transferase, N-terminal domain Glyma07g16820 Gm07 16490598 16492957 PF03108 MuDR family transposase Glyma07g16830 Gm07 16494026 16495340 PF02798 Glutathione S-transferase, N-terminal domain Glyma07g16840 Gm07 16498984 16500048 PF02798 Glutathione S-transferase, N-terminal domain Glyma07g16850 Gm07 16504922 16506099 PF02798 Glutathione S-transferase, N-terminal domain Glyma07g16860 Gm07 16509775 16511731 PF02798 Glutathione S-transferase, N-terminal domain Glyma07g16870 Gm07 16514432 16515454 PF02798 Glutathione S-transferase, N-terminal domain Glyma07g16890 Gm07 16522592 16533572 Glyma07g16910 Gm07 16548611 16550293 PF02798 Glutathione S-transferase, N-terminal domain Glyma07g16930 Gm07 16556854 16557938 PF00043 Glutathione S-transferase, C-terminal domain Glyma07g16940 Gm07 16569606 16571003 PF02798 Glutathione S-transferase, N-terminal domain Glyma07g16950 Gm07 16578396 16579945 PF00582 Universal stress protein family Glyma07g16960 Gm07 16604309 16604967 Glyma07g16970 Gm07 16613073 16615608 Glyma07g16980 Gm07 16635563 16637065 PF00249 Myb -like DNA-binding domain 105

Glyma07g16990 Gm07 16640457 16640765 PF04145 Ctr copper transporter family Glyma07g17000 Gm07 16667098 16668318 PF00234 Protease inhibitor/seed storage/LTP family

Glyma07g17010 Gm07 16672071 16674201 PF00560 Leucine Rich Repeat Glyma07g17030 Gm07 16690359 16691699 PF00234 Protease inhibitor/seed storage/LTP family Glyma07g17060 Gm07 16702018 16703178 PF04145 Ctr copper transporter family Glyma07g17080 Gm07 16708898 16709323 PF00011 Hsp20/alpha crystallin family Glyma07g17100 Gm07 16755216 16758625 PF12043 Domain of unknown function (DUF3527) Glyma07g17110 Gm07 16786656 16791621 Glyma07g17130 Gm07 16818356 16823217 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma07g17140 Gm07 16836768 16840815 PF07732 Multicopper oxidase Glyma07g17150 Gm07 16843756 16848625 PF07732 Multicopper oxidase Glyma07g17160 Gm07 16887145 16887674 Glyma07g17170 Gm07 16890922 16895686 PF07732 Multicopper oxidase Glyma07g17180 Gm07 16897647 16900459 PF00316 Fructose-1-6-bisphosphatase Glyma07g17190 Gm07 16901168 16903966 Glyma07g17220 Gm07 16942989 16946412 PF00560 Leucine Rich Repeat Glyma07g17230 Gm07 16955791 16957091 PF00139 Legume lectin domain Glyma07g17240 Gm07 16961765 16966252 Glyma07g17250 Gm07 16974067 16974943 PF01612 3' -5' exonuclease Glyma07g17290 Gm07 17004171 17006362 PF00560 Leucine Rich Repeat Glyma07g17300 Gm07 17013188 17016417 PF00560 Leucine Rich Repeat Glyma07g17310 Gm07 17025901 17026514 Glyma07g17340 Gm07 17052114 17053243 Glyma07g17350 Gm07 17054608 17056712 PF00560 Leucine Rich Repeat Glyma07g17370 Gm07 17076322 17082916 PF00560 Leucine Rich Repeat Glyma07g17380 Gm07 17108120 17111038 PF00153 Mitochondrial carrier protein Glyma07g17390 Gm07 17113715 17117916 Glyma07g17410 Gm07 17123413 17124352 PF02544 3 -oxo-5-alpha-steroid 4-dehydrogenase Glyma07g17420 Gm07 17126980 17138782 PF00782 Dual specificity phosphatase, catalytic domain Glyma07g17430 Gm07 17141327 17143732 PF06127 Protein of unknown function (DUF962) Glyma07g17440 Gm07 17145889 17150201 PF07690 Major Facilitator Superfamily Glyma07g17470 Gm07 17165628 17176649 PF00400 WD domain, G-beta repeat Glyma07g17490 Gm07 17201065 17203120 PF05340 Protein of unknown function (DUF740) Glyma07g17580 Gm07 17323956 17325567 Glyma07g17600 Gm07 17362342 17364967 Glyma07g17620 Gm07 17372920 17374905 PF01535 PPR repeat Glyma07g17630 Gm07 17375688 17376796 Glyma07g17640 Gm07 17379036 17382523 PF07690 Major Facilitator Superfamily Glyma07g17660 Gm07 17412555 17413952 PF00249 Myb-like DNA-binding domain Glyma07g17680 Gm07 17425541 17428523 PF00534 Glycosyl transferases group 1 Glyma07g17690 Gm07 17432935 17433318 106

Glyma07g17700 Gm07 17439697 17442261 Glyma07g17720 Gm07 17502600 17506321 PF01553 Acyltransferase

Glyma07g17730 Gm07 17544800 17549192 PF00560 Leucine Rich Repeat Glyma07g17810 Gm07 17626752 17634515 PF01490 Transmembrane amino acid transporter protein Glyma07g17830 Gm07 17656653 17658115 PF03140 Plant protein of unknown function Glyma07g17870 Gm07 17674166 17676140 PF01535 PPR repeat Glyma07g17880 Gm07 17678220 17679178 PF04488 Glycosyltransferase sugar-binding region containing DXD motif Glyma07g17890 Gm07 17681725 17685076 Glyma07g17900 Gm07 17687830 17693681 PF10551 MULE transposase domain Glyma07g17910 Gm07 17700111 17703051 PF08263 Leucine rich repeat N-terminal domain Glyma07g17930 Gm07 17721488 17721822 Glyma07g17940 Gm07 17726660 17733829 PF00035 Double -stranded RNA binding motif Glyma07g17970 Gm07 17760000 17760869 PF00646 F-box domain Glyma07g18020 Gm07 17778075 17784485 PF00069 Protein kinase domain Glyma07g18030 Gm07 17800526 17804246 Glyma07g18040 Gm07 17811351 17812357 PF03226 Yippee putative zinc-binding protein Glyma07g18060 Gm07 17821598 17824991 PF00717 Peptidase S24-like Glyma07g18080 Gm07 17829150 17832455 Glyma07g18100 Gm07 17839836 17845799 PF00181 Ribosomal Proteins L2, RNA binding domain Glyma07g18110 Gm07 17850485 17851918 PF00118 TCP-1/cpn60 chaperonin family Glyma07g18120 Gm07 17855090 17861025 PF04884 Protein of unknown function, DUF647 Glyma07g18130 Gm07 17870814 17877332 PF08240 Alcohol dehydrogenase GroES-like domain Glyma07g18140 Gm07 17883227 17888525 PF00153 Mitochondrial carrier protein Glyma07g18150 Gm07 17891805 17896114 PF01699 Sodium/calcium exchanger protein Glyma07g18160 Gm07 17910468 17921840 PF04791 LMBR1-like Glyma07g18170 Gm07 17923978 17933886 PF00657 GDSL-like Lipase/Acylhydrolase Glyma07g18180 Gm07 17942248 17955108 PF02985 HEAT repeat Glyma07g18200 Gm07 17961975 17967753 PF00657 GDSL-like Lipase/Acylhydrolase Glyma07g18210 Gm07 17970292 17979855 PF00657 GDSL-like Lipase/Acylhydrolase Glyma07g18230 Gm07 17984790 17989484 PF00657 GDSL-like Lipase/Acylhydrolase Glyma07g18240 Gm07 18027562 18031435 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma07g18260 Gm07 18044102 18048515 PF00226 DnaJ domain Glyma07g18270 Gm07 18053719 18057605 PF12165 Domain of unknown function (DUF3594) Glyma07g18280 Gm07 18088997 18092965 PF03171 2OG-Fe(II) oxygenase superfamily Glyma07g18310 Gm07 18181067 18188799 PF00069 Protein kinase domain Glyma07g18320 Gm07 18213591 18214890 Glyma07g18340 Gm07 18244044 18246127 Glyma07g18350 Gm07 18262673 18265740 PF11960 Domain of unknown function (DUF3474) Glyma07g18370 Gm07 18300064 18304498 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Glyma07g18380 Gm07 18305185 18306194 Glyma07g18400 Gm07 18322932 18332542 PF00232 Glycosyl hydrolase family 1 107

Glyma07g18410 Gm07 18361046 18365059 PF00232 Glycosyl hydrolase family 1 Glyma07g18440 Gm07 18392053 18394696 PF03005 Arabidopsis proteins of unknown function

Glyma07g18450 Gm07 18396416 18399486 Glyma07g18460 Gm07 18402771 18406372 PF02630 SCO1/SenC Glyma07g18470 Gm07 18408168 18413639 PF01040 UbiA prenyltransferase family Glyma07g18480 Gm07 18414193 18414405 PF00477 Small hydrophilic plant seed protein Glyma07g18490 Gm07 18423979 18432173 PF03372 Endonuclease/Exonuclease/phosphatase family Glyma07g18500 Gm07 18500146 18504353 PF00557 Metallopeptidase family M24 Glyma07g18520 Gm07 18517174 18521782 PF00098 Zinc knuckle Glyma07g18530 Gm07 18522176 18535283 PF03810 Importin-beta N-terminal domain Glyma07g18540 Gm07 18534877 18538678 Glyma07g18550 Gm07 18543583 18547250 PF00226 DnaJ domain Glyma07g18570 Gm07 18594451 18597542 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Glyma07g18590 Gm07 18634559 18637753 PF08263 Leucine rich repeat N-terminal domain Glyma07g18630 Gm07 18673049 18676069 PF04765 Protein of unknown function (DUF616) Glyma07g18640 Gm07 18678721 18682896 PF08263 Leucine rich repeat N-terminal domain Glyma07g18650 Gm07 18688296 18688601 PF00010 Helix-loop-helix DNA-binding domain Glyma07g18660 Gm07 18694069 18698176 PF02179 BAG domain Glyma07g18670 Gm07 18699922 18704223 PF00909 Ammonium Transporter Family Glyma07g18870 Gm07 18829106 18831119 PF00249 Myb-like DNA-binding domain Glyma07g18880 Gm07 18847933 18848637 Glyma07g18890 Gm07 18852546 18854591 PF00139 Legume lectin domain Glyma07g18910 Gm07 18857314 18862743 PF02992 Transposase family tnp2 Glyma07g18950 Gm07 18893174 18895070 Glyma07g18960 Gm07 18903458 18905774 Glyma07g18970 Gm07 18905302 18905897 Glyma07g18980 Gm07 18907962 18910056 PF03227 Gamma interferon inducible lysosomal thiol reductase (GILT) Glyma07g19010 Gm07 18929938 18931064 Glyma07g19040 Gm07 18961980 18969987 PF08263 Leucine rich repeat N-terminal domain Glyma07g19050 Gm07 18972485 18973226 Glyma07g19060 Gm07 18973781 18976704 PF00210 Ferritin -like domain Glyma07g19080 Gm07 18981975 18988056 PF07842 GC-rich sequence DNA-binding factor-like protein Glyma07g19100 Gm07 18991540 18995287 PF04398 Protein of unknown function, DUF538 Glyma07g19120 Gm07 19024949 19025959 PF10604 Polyketide cyclase / dehydrase and transport Glyma07g19140 Gm07 19034605 19038888 PF03005 Arabidopsis proteins of unknown function Glyma07g19170 Gm07 19068472 19071465 PF10584 Proteasome subunit A N-terminal signature Glyma07g19180 Gm07 19074673 19077820 PF08263 Leucine rich repeat N-terminal domain Glyma07g19190 Gm07 19088058 19090129 PF00366 Ribosomal protein S17 Glyma07g19200 Gm07 19094104 19099026 PF08263 Leucine rich repeat N-terminal domain Glyma07g19210 Gm07 19101961 19109510 PF01554 MatE Glyma07g19220 Gm07 19112036 19112579 PF00847 AP2 domain 108

Glyma07g19230 Gm07 19117985 19118501 PF03650 Uncharacterised protein family (UPF0041) Glyma07g19240 Gm07 19124987 19125658 PF03208 PRA1 family protein

Glyma07g19250 Gm07 19128550 19130648 PF01187 Macrophage migration inhibitory factor (MIF) Glyma07g19290 Gm07 19165854 19172458 PF02985 HEAT repeat Glyma07g19300 Gm07 19175621 19177289 Glyma07g19310 Gm07 19180661 19182728 Glyma07g19340 Gm07 19190145 19193612 PF10539 Development and cell death domain Glyma07g19360 Gm07 19210670 19211464 PF03018 Dirigent-like protein Glyma07g19370 Gm07 19248485 19252591 PF01370 NAD dependent epimerase/dehydratase family Glyma07g19380 Gm07 19274485 19275271 PF02362 B3 DNA binding domain Glyma07g19420 Gm07 19345507 19347941 PF02182 YDG/SRA domain Glyma07g19450 Gm07 19399481 19403975 PF00160 type peptidyl-prolyl cis-trans isomerase/CLD Glyma07g19460 Gm07 19425818 19436651 PF00176 SNF2 family N-terminal domain Glyma07g19470 Gm07 19464432 19469315 PF12171 Zinc-finger double-stranded RNA-binding Glyma07g19540 Gm07 19569162 19577972 PF12171 Zinc-finger double-stranded RNA-binding Glyma07g19590 Gm07 19728164 19729080 PF00249 Myb-like DNA-binding domain Glyma07g19600 Gm07 19758077 19760203 PF03407 Nucleotide-diphospho-sugar transferase Glyma07g19620 Gm07 19791845 19795288 PF03924 CHASE domain Glyma07g19730 Gm07 19929580 19932875 PF07649 C1-like domain Glyma07g19750 Gm07 20015644 20018686 PF01535 PPR repeat Glyma07g19770 Gm07 20053351 20059462 PF03110 SBP domain Glyma07g19810 Gm07 20089670 20091033 PF00415 Regulator of chromosome condensation (RCC1) repeat Glyma07g19820 Gm07 20107745 20110614 PF10536 Plant mobile domain Glyma07g19850 Gm07 20189292 20194914 Glyma07g19860 Gm07 20192186 20194293 Glyma07g20070 Gm07 20330598 20335062 PF08311 Mad3/BUB1 homology region 1 Glyma07g20080 Gm07 20353915 20355733 PF00067 Cytochrome P450 Glyma07g20090 Gm07 20357172 20360032 PF00642 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Glyma07g20380 Gm07 20592321 20594053 PF01535 PPR repeat Glyma07g20400 Gm07 20597378 20603213 Glyma07g20430 Gm07 20663400 20666558 PF00067 Cytochrome P450 Glyma07g20500 Gm07 20848191 20854541 PF05903 PPPDE putative peptidase domain Glyma07g20530 Gm07 20939313 20940428 PF05055 Protein of unknown function (DUF677) Glyma07g20560 Gm07 20974422 20976263 Glyma07g20580 Gm07 21068227 21070315 PF01535 PPR repeat Glyma07g20820 Gm07 21230935 21232393 PF09685 import component protein (Tic20) Glyma07g20850 Gm07 21267190 21267885 PF00569 Zinc finger, ZZ type, Glyma07g20860 Gm07 21274677 21280658 PF00501 AMP-binding enzyme Glyma07g20870 Gm07 21299778 21309079 Glyma07g20960 Gm07 21361274 21362278 Glyma07g20990 Gm07 21384935 21385139 109

Glyma07g21040 Gm07 21458531 21460461 Glyma07g21100 Gm07 21493259 21498258

Glyma07g21110 Gm07 21552183 21558042 Glyma07g21120 Gm07 21560548 21560778 Glyma07g21150 Gm07 21583810 21584751 PF08041 PetM family of cytochrome b6f complex subunit 7 Glyma07g21160 Gm07 21619670 21625229 PF02362 B3 DNA binding domain Glyma07g21210 Gm07 21763730 21766791 PF08263 Leucine rich repeat N-terminal domain Glyma07g21440 Gm07 22674916 22679178 PF00293 NUDIX domain Glyma07g21640 Gm07 22806469 22811215 Glyma07g21660 Gm07 22836205 22845800 PF00270 DEAD/DEAH box helicase Glyma07g21670 Gm07 22847469 22849323 PF00271 Helicase conserved C-terminal domain Glyma07g21700 Gm07 22881718 22884484 PF01535 PPR repeat Glyma07g21920 Gm07 23211359 23217557 Glyma07g22340 Gm07 23714940 23719355 PF03547 Membrane transport protein Glyma07g22540 Gm07 23954848 23961541 Glyma07g22950 Gm07 24679312 24683066 Glyma07g22970 Gm07 24723641 24724552 Glyma07g23190 Gm07 24911673 24916190 Glyma07g23210 Gm07 24923927 24925040 Glyma07g23240 Gm07 25040205 25041830 PF00847 AP2 domain Glyma07g23250 Gm07 25040666 25043306 PF02383 SacI homology domain Glyma07g23260 Gm07 25043735 25047488 Glyma07g23470 Gm07 25449923 25455880 PF02485 Core -2/I-Branching enzyme Glyma07g23480 Gm07 25476431 25477054 Glyma07g23500 Gm07 25540508 25546629 PF03989 DNA gyrase C-terminal domain, beta-propeller Glyma07g23770 Gm07 25841780 25843128 PF00514 Armadillo/beta-catenin-like repeat Glyma07g23780 Gm07 25844221 25848842 PF00514 Armadillo/beta-catenin-like repeat Glyma07g23800 Gm07 25925434 25927997 Glyma07g24010 Gm07 26124252 26132679 PF00069 Protein kinase domain Glyma07g24030 Gm07 26178155 26179228 PF03328 HpcH/HpaI aldolase/citrate lyase family Glyma07g24480 Gm07 26954343 26961186 PF00996 GDP dissociation inhibitor Glyma07g24490 Gm07 26961792 26966752 Glyma07g24530 Gm07 26987780 26989013 Glyma07g24540 Gm07 27020018 27020487 Glyma07g24670 Gm07 27183749 27184096 Glyma07g24710 Gm07 27205774 27206597 PF00416 Ribosomal protein S13/S18 Glyma07g24730 Gm07 27230123 27231878 Glyma07g24950 Gm07 27388296 27395794 Glyma07g25390 Gm07 27756443 27759754 PF03171 2OG -Fe(II) oxygenase superfamily Glyma07g25400 Gm07 27824685 27830191 PF03732 Retrotransposon gag protein Glyma07g25430 Gm07 27896172 27897008 PF03634 TCP family transcription factor 110

Glyma07g25450 Gm07 27938135 27940676 PF00293 NUDIX domain Glyma07g25460 Gm07 27945474 27946945

Glyma07g25470 Gm07 27948905 27949668 Glyma07g25680 Gm07 28148096 28149644 PF06839 GRF zinc finger Glyma07g25710 Gm07 28178661 28180872 PF07676 WD40-like Beta Propeller Repeat Glyma07g25940 Gm07 28442340 28442765 PF00036 EF hand Glyma07g25970 Gm07 28452956 28453748 Glyma07g26010 Gm07 28530532 28534364 PF00023 Glyma07g26030 Gm07 28538409 28549933 PF02985 HEAT repeat Glyma07g26040 Gm07 28551912 28556465 Glyma07g26240 Gm07 28673766 28677919 PF11722 CCCH zinc finger in TRM13 protein Glyma07g26460 Gm07 29234864 29241566 Glyma07g26470 Gm07 29276801 29291011 Glyma07g26500 Gm07 29325697 29327580 Glyma07g26520 Gm07 29365031 29366311 Glyma07g26540 Gm07 29379434 29387300 PF07058 Myosin II heavy chain-like Glyma07g26550 Gm07 29391400 29393342 PF00012 protein Glyma07g26560 Gm07 29397256 29398250 PF07649 C1-like domain Glyma07g26790 Gm07 29589027 29590695 PF00118 TCP-1/cpn60 chaperonin family Glyma07g26870 Gm07 29639247 29649647 PF01031 Dynamin central region Glyma07g26890 Gm07 29691532 29696759 PF00072 Response regulator receiver domain Glyma07g26900 Gm07 29726460 29732127 PF05183 RNA dependent RNA polymerase Glyma07g26910 Gm07 29778146 29781820 PF00010 Helix-loop-helix DNA-binding domain Glyma07g26940 Gm07 29822230 29825310 Glyma07g26980 Gm07 29968877 29972052 PF00982 Glycosyltransferase family 20 Glyma07g27290 Gm07 30275774 30282967 PF02984 Cyclin, C-terminal domain Glyma07g27300 Gm07 30284151 30288445 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Glyma07g27310 Gm07 30296643 30298652 PF04640 PLATZ transcription factor Glyma07g27370 Gm07 30381833 30384554 PF01453 D-mannose binding lectin Glyma07g27390 Gm07 30392655 30396155 PF08263 Leucine rich repeat N-terminal domain Glyma07g27410 Gm07 30554248 30555781 PF01535 PPR repeat Glyma07g27450 Gm07 30632936 30649190 PF01095 Pectinesterase Glyma07g27530 Gm07 30899272 30899778 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma07g27540 Gm07 30900495 30906799 PF03924 CHASE domain Glyma07g27590 Gm07 30942828 30948961 PF08477 Miro-like protein Glyma07g27600 Gm07 30952506 30954185 PF01535 PPR repeat Glyma07g27800 Gm07 31223027 31223282 PF02892 BED zinc finger Glyma07g27820 Gm07 31345243 31348028 Glyma07g27830 Gm07 31358022 31360338 PF07227 Protein of unknown function (DUF1423) Glyma07g27850 Gm07 31388008 31388510 Glyma07g27950 Gm07 31517857 31520655 PF03188 Eukaryotic cytochrome b561 111

Glyma07g27990 Gm07 31628481 31631609 PF00722 Glycosyl hydrolases family 16 Glyma07g28020 Gm07 31656296 31659452 PF00117 Glutamine amidotransferase class-I

Glyma07g28040 Gm07 31815445 31817008 PF00107 Zinc-binding dehydrogenase Glyma07g28060 Gm07 31988928 31994943 Glyma07g28080 Gm07 32034631 32045326 PF00191 Annexin Glyma07g28310 Gm07 32378952 32390328 PF00249 Myb-like DNA-binding domain Glyma07g28520 Gm07 32594098 32594936 Glyma07g28550 Gm07 32626021 32633385 PF01585 G -patch domain Glyma07g28580 Gm07 32685372 32686060 Glyma07g28610 Gm07 32764484 32765371 PF07172 Glycine rich protein family Glyma07g28640 Gm07 32833381 32849796 PF03732 Retrotransposon gag protein Glyma07g28880 Gm07 33105103 33106352 PF02893 GRAM domain Glyma07g28910 Gm07 33150568 33155501 PF03171 2OG-Fe(II) oxygenase superfamily Glyma07g28940 Gm07 33238813 33241844 PF03181 BURP domain Glyma07g28970 Gm07 33358926 33362655 PF03171 2OG-Fe(II) oxygenase superfamily Glyma07g28990 Gm07 33415649 33424547 PF06454 Protein of unknown function (DUF1084) Glyma07g29000 Gm07 33425676 33427562 PF01535 PPR repeat Glyma07g29090 Gm07 33570396 33572427 PF00069 Protein kinase domain Glyma07g29110 Gm07 33634693 33641693 PF01535 PPR repeat Glyma07g29150 Gm07 33793573 33794695 PF07816 Protein of unknown function (DUF1645) Glyma07g29170 Gm07 33850368 33850594 PF01781 Ribosomal L38e protein family Glyma07g29210 Gm07 33946283 33947186 PF00168 C2 domain Glyma07g29270 Gm07 34018817 34020665 Glyma07g29280 Gm07 34040667 34041689 PF07651 ANTH domain Glyma07g29300 Gm07 34122381 34122541 PF08137 DVL family Glyma07g29380 Gm07 34172488 34173972 Glyma07g29400 Gm07 34205714 34206991 Glyma07g29410 Gm07 34216650 34217662 PF02298 -like domain Glyma07g29430 Gm07 34289343 34290222 Glyma07g29440 Gm07 34295951 34300462 PF00514 Armadillo/beta -catenin-like repeat Glyma07g29490 Gm07 34326459 34328567 PF00249 Myb-like DNA-binding domain Glyma07g29500 Gm07 34352535 34356221 PF00069 Protein kinase domain Glyma07g29520 Gm07 34365453 34369624 PF01535 PPR repeat Glyma07g29550 Gm07 34520562 34521538 PF05970 PIF1 helicase Glyma07g29560 Gm07 34570515 34574669 Glyma07g29610 Gm07 34608894 34613471 PF10536 Plant mobile domain Glyma07g29630 Gm07 34624502 34629907 PF01118 Semialdehyde dehydrogenase, NAD binding domain Glyma07g29640 Gm07 34635418 34639067 Glyma07g29650 Gm07 34640449 34652245 PF03171 2OG -Fe(II) oxygenase superfamily Glyma07g29660 Gm07 34653438 34659779 Glyma07g29670 Gm07 34679360 34685462 PF00108 Thiolase, N-terminal domain 112

Glyma07g29720 Gm07 34800210 34802905 PF00467 KOW motif Glyma07g29730 Gm07 34837225 34838006

Glyma07g29940 Gm07 35025068 35026954 PF03171 2OG-Fe(II) oxygenase superfamily Glyma07g29950 Gm07 35028559 35030320 Glyma07g29960 Gm07 35043830 35046952 PF03000 NPH3 family Glyma07g29970 Gm07 35065608 35066482 Glyma07g29980 Gm07 35066881 35068452 Glyma07g29990 Gm07 35081148 35081840 Glyma07g30030 Gm07 35099824 35101787 PF00226 DnaJ domain Glyma07g30040 Gm07 35111290 35116757 PF00319 SRF-type transcription factor (DNA-binding and dimerisation domain) Glyma07g30050 Gm07 35125343 35131610 PF00996 GDP dissociation inhibitor Glyma07g30060 Gm07 35132345 35136178 PF04483 Protein of unknown function (DUF565) Glyma07g30070 Gm07 35136112 35138685 Glyma07g30080 Gm07 35138884 35142357 Glyma07g30090 Gm07 35148665 35152306 PF00795 Carbon -nitrogen hydrolase Glyma07g30100 Gm07 35154923 35163796 PF12014 Domain of unknown function (DUF3506) Glyma07g30110 Gm07 35172701 35175703 PF00316 Fructose-1-6-bisphosphatase Glyma07g30120 Gm07 35177277 35184219 PF00013 KH domain Glyma07g30130 Gm07 35184512 35186143 Glyma07g30140 Gm07 35186721 35192725 PF06200 tify domain Glyma07g30150 Gm07 35197579 35206116 PF01031 Dynamin central region Glyma07g30160 Gm07 35207309 35210501 PF06747 CHCH domain Glyma07g30170 Gm07 35223311 35226178 PF00117 Glutamine amidotransferase class-I Glyma07g30180 Gm07 35234524 35236176 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase Glyma07g30190 Gm07 35247806 35249125 Glyma07g30200 Gm07 35251110 35252453 PF00201 UDP -glucoronosyl and UDP-glucosyl transferase Glyma07g30210 Gm07 35262395 35268952 PF00171 Aldehyde dehydrogenase family Glyma07g30230 Gm07 35272403 35273684 PF04576 Protein of unknown function, DUF593 Glyma07g30250 Gm07 35280698 35282905 PF00139 Legume lectin domain Glyma07g30260 Gm07 35285985 35288385 PF00139 Legume lectin domain Glyma07g30270 Gm07 35311371 35314107 Glyma07g30280 Gm07 35315425 35320922 PF03169 OPT oligopeptide transporter protein Glyma07g30290 Gm07 35323696 35327237 PF00012 Hsp70 protein Glyma07g30300 Gm07 35337293 35338886 PF00564 PB1 domain Glyma07g30320 Gm07 35343175 35347267 Glyma07g30330 Gm07 35348332 35351955 PF03005 Arabidopsis proteins of unknown function Glyma07g30350 Gm07 35354656 35357016 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Glyma07g30360 Gm07 35365421 35376666 PF00999 Sodium/hydrogen exchanger family Glyma07g30370 Gm07 35378448 35386066 PF07690 Major Facilitator Superfamily Glyma07g30380 Gm07 35390201 35400953 PF00023 Ankyrin repeat Glyma07g30390 Gm07 35401506 35402809 113

Glyma07g30400 Gm07 35405143 35406015 PF00248 Aldo/keto reductase family Glyma07g30410 Gm07 35427531 35430809 PF04749 PLAC8 family

Glyma07g30420 Gm07 35434675 35435934 PF00010 Helix-loop-helix DNA-binding domain Glyma07g30430 Gm07 35437880 35441602 PF00056 lactate/malate dehydrogenase, NAD binding domain Glyma07g30440 Gm07 35448732 35453022 PF08491 Squalene epoxidase Glyma07g30460 Gm07 35457961 35464623 PF00155 Aminotransferase class I and II Glyma07g30470 Gm07 35470898 35476304 PF01595 Domain of unknown function DUF21 Glyma07g30480 Gm07 35486627 35490705 PF03005 Arabidopsis proteins of unknown function Glyma07g30500 Gm07 35492961 35495455 PF01063 Aminotransferase class IV Glyma07g30510 Gm07 35500878 35503935 PF01063 Aminotransferase class IV Glyma07g30520 Gm07 35515389 35515837 PF00188 Cysteine-rich secretory protein family Glyma07g30530 Gm07 35517289 35517771 PF00188 Cysteine-rich secretory protein family Glyma07g30540 Gm07 35521734 35522187 PF00188 Cysteine-rich secretory protein family Glyma07g30550 Gm07 35525625 35526619 Glyma07g30570 Gm07 35541310 35544740 PF01925 Sulfite exporter TauE/SafE Glyma07g30580 Gm07 35545794 35562181 PF00225 Kinesin motor domain Glyma07g30620 Gm07 35577923 35579286 PF06749 Protein of unknown function (DUF1218) Glyma07g30630 Gm07 35581929 35584311 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) Glyma07g30640 Gm07 35586465 35589172 Glyma07g30650 Gm07 35590402 35592571 PF11326 Protein of unknown function (DUF3128) Glyma07g30660 Gm07 35600437 35601550 PF00646 F-box domain Glyma07g30670 Gm07 35609517 35614118 Glyma07g30700 Gm07 35639201 35642213 PF01397 Terpene synthase, N-terminal domain Glyma07g30710 Gm07 35668549 35672539 PF01397 Terpene synthase, N-terminal domain Glyma07g30720 Gm07 35676425 35678085 PF01535 PPR repeat Glyma07g30730 Gm07 35680441 35681105 PF00010 Helix-loop-helix DNA-binding domain Glyma07g30740 Gm07 35682640 35684062 PF04398 Protein of unknown function, DUF538 Glyma07g30750 Gm07 35704510 35707790 PF03358 NADPH-dependent FMN reductase Glyma07g30760 Gm07 35723868 35724920 PF04564 U-box domain Glyma07g30770 Gm07 35736566 35739537 PF07714 Protein tyrosine kinase Glyma07g30790 Gm07 35743550 35752548 PF01453 D-mannose binding lectin Glyma07g30800 Gm07 35759329 35762328 PF04749 PLAC8 family Glyma07g30810 Gm07 35765454 35767332 PF00564 PB1 domain Glyma07g30840 Gm07 35784862 35790406 PF08879 WRC Glyma07g30850 Gm07 35791714 35798498 PF03109 ABC1 family Glyma07g30860 Gm07 35810963 35812540 PF00249 Myb-like DNA-binding domain Glyma07g30870 Gm07 35819736 35823931 PF00635 MSP (Major sperm protein) domain Glyma07g30880 Gm07 35835601 35839366 PF07690 Major Facilitator Superfamily Glyma07g30890 Gm07 35858214 35858711 Glyma07g30900 Gm07 35865589 35867633 PF00514 Armadillo/beta -catenin-like repeat

1

Glyma07g30910 Gm07 35879602 35884568 PF00560 Leucine Rich Repeat 14

Glyma07g30920 Gm07 35898095 35903489 PF07992 Pyridine nucleotide-disulphide oxidoreductase Glyma07g30930 Gm07 35910977 35912445 PF01565 FAD binding domain

Glyma07g30940 Gm07 35916096 35917552 PF01565 FAD binding domain Glyma07g30950 Gm07 35924219 35925636 PF00646 F-box domain Glyma07g30960 Gm07 35929655 35935185 PF00400 WD domain, G-beta repeat Glyma07g30970 Gm07 35937045 35940607 PF00702 haloacid dehalogenase-like hydrolase Glyma07g30980 Gm07 35953189 35958639 Glyma07g30990 Gm07 35959654 35964987 PF07887 Calmodulin binding protein-like Glyma07g31000 Gm07 35969162 35970956 PF09805 Nucleolar protein 12 (25kDa) Glyma07g31030 Gm07 35979999 35981870 PF03997 VPS28 protein Glyma07g31040 Gm07 35988860 35991021 Glyma07g31050 Gm07 35993492 35997977 PF07992 Pyridine nucleotide-disulphide oxidoreductase Glyma07g31070 Gm07 36005462 36006118 Glyma07g31080 Gm07 36020541 36024439 PF00459 Inositol monophosphatase family Glyma07g31090 Gm07 36026468 36033712 PF04144 SCAMP family Glyma07g31100 Gm07 36035630 36041633 PF05212 Protein of unknown function (DUF707) Glyma07g31110 Gm07 36052090 36057382 PF05346 Eukaryotic membrane protein family Glyma07g31120 Gm07 36061210 36066326 PF00439 Bromodomain Glyma07g31130 Gm07 36074355 36081069 PF00400 WD domain, G-beta repeat Glyma07g31140 Gm07 36093085 36099207 PF08263 Leucine rich repeat N-terminal domain Glyma07g31150 Gm07 36104806 36105591 Glyma07g31160 Gm07 36115551 36115781 Glyma07g31180 Gm07 36143328 36148556 PF00176 SNF2 family N-terminal domain Glyma07g31200 Gm07 36160284 36167016 PF00450 Serine carboxypeptidase Glyma07g31210 Gm07 36178035 36180399 PF03936 Terpene synthase family, metal binding domain Glyma07g31220 Gm07 36191920 36193684 PF02365 No apical meristem (NAM) protein Glyma07g31230 Gm07 36196988 36199733 PF00005 ABC transporter Glyma07g31240 Gm07 36212656 36213653 PF01582 TIR domain Glyma07g31250 Gm07 36224753 36227762 Glyma07g31270 Gm07 36264797 36266044 PF00264 Common central domain of tyrosinase Glyma07g31280 Gm07 36277825 36279786 PF00264 Common central domain of tyrosinase Glyma07g31290 Gm07 36292993 36298291 PF00264 Common central domain of tyrosinase Glyma07g31300 Gm07 36308160 36309591 PF00264 Common central domain of tyrosinase Glyma07g31310 Gm07 36320692 36322806 PF00264 Common central domain of tyrosinase Glyma07g31320 Gm07 36340855 36347453 PF02096 60Kd inner membrane protein Glyma07g31330 Gm07 36353167 36357722 PF06749 Protein of unknown function (DUF1218) Glyma07g31340 Gm07 36361789 36363720 PF02701 Dof domain, zinc finger Glyma07g31350 Gm07 36377214 36382431 PF04037 Domain of unknown function (DUF382) Glyma07g31360 Gm07 36389006 36390177 Glyma07g31380 Gm07 36400692 36405314 PF00067 Cytochrome P450 Glyma07g31390 Gm07 36407590 36409711 PF00067 Cytochrome P450 115

Glyma07g31400 Gm07 36411027 36419713 PF07814 Wings apart-like protein regulation of heterochromatin Glyma07g31410 Gm07 36426004 36428203 PF10551 MULE transposase domain

Glyma07g31430 Gm07 36438838 36449547 PF00035 Double-stranded RNA binding motif Glyma07g31440 Gm07 36451956 36455024 PF01535 PPR repeat Glyma07g31450 Gm07 36458567 36461477 Glyma07g31460 Gm07 36466777 36471452 PF00069 Protein kinase domain Glyma07g31470 Gm07 36481833 36489225 PF06159 Protein of unknown function (DUF974) Glyma07g31500 Gm07 36495572 36497847 PF12481 Aluminium induced protein Glyma07g31510 Gm07 36507728 36511603 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma07g31520 Gm07 36523149 36529942 PF03849 Transcription factor Tfb2 Glyma07g31530 Gm07 36530779 36534348 Glyma07g31550 Gm07 36540882 36546037 PF01713 Smr domain Glyma07g31560 Gm07 36546673 36547297 Glyma07g31570 Gm07 36549116 36560997 PF02359 Cell division protein 48 (CDC48), N-terminal domain Glyma07g31580 Gm07 36564294 36567013 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma07g31590 Gm07 36577900 36579974 Glyma07g31600 Gm07 36581055 36585694 PF06943 LSD1 zinc finger Glyma07g31610 Gm07 36590751 36591687 PF04535 Domain of unknown function (DUF588) Glyma07g31620 Gm07 36592668 36594382 PF01535 PPR repeat Glyma07g31630 Gm07 36595304 36600501 PF00179 Ubiquitin-conjugating enzyme Glyma07g31650 Gm07 36611600 36616027 PF00829 Ribosomal prokaryotic L21 protein Glyma07g31660 Gm07 36627124 36630702 PF00305 Glyma07g31670 Gm07 36631847 36634088 PF08477 Miro-like protein Glyma07g31680 Gm07 36635023 36641209 PF04765 Protein of unknown function (DUF616) Glyma07g31690 Gm07 36653644 36656157 PF04720 Protein of unknown function (DUF506) Glyma07g31700 Gm07 36673665 36677198 PF07714 Protein tyrosine kinase Glyma07g31710 Gm07 36683232 36683929 PF00010 Helix-loop-helix DNA-binding domain Glyma07g31720 Gm07 36697183 36698842 PF01535 PPR repeat Glyma07g31730 Gm07 36700789 36701499 PF03087 Arabidopsis protein of unknown function Glyma07g31740 Gm07 36702880 36706897 PF00226 DnaJ domain Glyma12g01470 Gm12 884668 886718 Glyma12g01480 Gm12 891193 894050 PF00295 Glycosyl hydrolases family 28 Glyma12g01490 Gm12 895186 897034 PF00230 Major intrinsic protein Glyma12g01500 Gm12 899525 904873 Glyma12g01510 Gm12 910464 912351 Glyma12g01520 Gm12 913456 914037 Glyma12g01530 Gm12 915048 918734 PF04749 PLAC8 family Glyma12g01540 Gm12 919896 920877 PF05648 Peroxisomal biogenesis factor 11 (PEX11) Glyma12g01550 Gm12 923556 926259 PF03194 LUC7 N_terminus Glyma12g01570 Gm12 929266 935561 PF10191 Golgi complex component 7 (COG7) Glyma12g01580 Gm12 941609 942895 PF00011 Hsp20/alpha crystallin family 116

Glyma12g01590 Gm12 950775 954916 PF07690 Major Facilitator Superfamily Glyma12g01600 Gm12 959533 964209 PF04542 Sigma-70 region 2

Glyma12g01610 Gm12 965487 969626 Glyma12g01630 Gm12 975872 984383 PF02919 Eukaryotic DNA topoisomerase I, DNA binding fragment Glyma12g01640 Gm12 991985 993377 PF00067 Cytochrome P450 Glyma12g01650 Gm12 994119 997305 PF00561 alpha/beta hydrolase fold Glyma12g01660 Gm12 1005622 1010689 Glyma12g01670 Gm12 1013961 1017266 Glyma12g01680 Gm12 1020621 1024132 PF08241 Methyltransferase domain Glyma12g01690 Gm12 1028191 1032082 PF08241 Methyltransferase domain Glyma12g01700 Gm12 1034690 1036290 Glyma12g01710 Gm12 1038599 1040122 Glyma12g01720 Gm12 1041019 1052011 PF07034 Origin recognition complex (ORC) subunit 3 N-terminus Glyma12g01730 Gm12 1061284 1065127 PF08880 QLQ Glyma12g01740 Gm12 1066570 1073829 PF12537 Protein of unknown function (DUF3735) Glyma12g01750 Gm12 1075341 1084551 PF00628 PHD-finger Glyma12g01770 Gm12 1089643 1091926 PF08240 Alcohol dehydrogenase GroES-like domain Glyma12g01780 Gm12 1096325 1098472 PF08240 Alcohol dehydrogenase GroES-like domain Glyma12g01790 Gm12 1100942 1103232 PF08240 Alcohol dehydrogenase GroES-like domain Glyma12g01800 Gm12 1107405 1109390 PF08240 Alcohol dehydrogenase GroES-like domain Glyma12g01810 Gm12 1112484 1115111 PF00226 DnaJ domain Glyma12g01820 Gm12 1117599 1118585 PF06094 AIG2-like family Glyma12g01840 Gm12 1123840 1127691 PF02370 M protein repeat Glyma12g01850 Gm12 1132554 1135881 PF01145 SPFH domain / Band 7 family Glyma12g01860 Gm12 1137744 1138715 Glyma12g01880 Gm12 1139865 1143389 PF04049 Anaphase promoting complex subunit 8 / Cdc23 Glyma12g01890 Gm12 1148736 1151264 PF00643 B-box zinc finger Glyma12g01900 Gm12 1157668 1158762 PF00642 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Glyma12g01910 Gm12 1159649 1163457 Glyma12g01920 Gm12 1164715 1167936 PF00294 pfkB family carbohydrate kinase Glyma12g01930 Gm12 1170305 1174138 Glyma12g01940 Gm12 1179077 1182726 Glyma12g01950 Gm12 1188270 1192291 Glyma12g01960 Gm12 1194822 1196594 PF00249 Myb -like DNA-binding domain Glyma12g01970 Gm12 1201968 1203314 PF00407 Pathogenesis-related protein Bet v I family Glyma12g01980 Gm12 1207675 1212249 PF02466 Tim17/Tim22/Tim23 family Glyma12g01990 Gm12 1213526 1214947 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Glyma12g02000 Gm12 1218358 1220298 PF00790 VHS domain Glyma12g02010 Gm12 1221499 1225980 PF03016 Exostosin family Glyma12g02020 Gm12 1234630 1239590 PF12037 Domain of unknown function (DUF3523) Glyma12g02030 Gm12 1240963 1243533 117

Glyma12g02040 Gm12 1244641 1246150 PF00581 Rhodanese -like domain Glyma12g02050 Gm12 1247909 1251408 PF02319 E2F/DP family winged-helix DNA-binding domain

Glyma12g02060 Gm12 1260191 1262213 PF03514 GRAS family transcription factor Glyma12g02070 Gm12 1266313 1274668 PF00083 Sugar (and other) transporter Glyma12g02080 Gm12 1280318 1292051 PF09334 tRNA synthetases class I (M) Glyma12g02090 Gm12 1294561 1305684 PF03810 Importin-beta N-terminal domain Glyma12g02110 Gm12 1307941 1311631 PF00025 ADP-ribosylation factor family Glyma12g02120 Gm12 1313074 1315336 PF06101 Plant protein of unknown function (DUF946) Glyma12g02130 Gm12 1316512 1321581 Glyma12g02140 Gm12 1324452 1326486 Glyma12g02150 Gm12 1330020 1333585 Glyma12g02160 Gm12 1337610 1342232 PF03803 Scramblase Glyma12g02170 Gm12 1343558 1346583 PF06749 Protein of unknown function (DUF1218) Glyma12g02180 Gm12 1349206 1351863 PF05348 Proteasome maturation factor UMP1 Glyma12g02200 Gm12 1353852 1358620 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Glyma12g02210 Gm12 1368913 1371932 Glyma12g02220 Gm12 1372931 1375063 PF06432 Phosphatidylinositol N-acetylglucosaminyltransferase Glyma12g02230 Gm12 1376059 1380763 PF01370 NAD dependent epimerase/dehydratase family Glyma12g02240 Gm12 1383153 1385895 PF01370 NAD dependent epimerase/dehydratase family Glyma12g02250 Gm12 1389393 1395553 PF01370 NAD dependent epimerase/dehydratase family Glyma12g02260 Gm12 1404657 1408323 PF11891 Domain of unknown function (DUF3411) Glyma12g02270 Gm12 1409377 1417086 PF01513 ATP-NAD kinase Glyma12g02280 Gm12 1422579 1426737 PF00622 SPRY domain Glyma12g02290 Gm12 1427488 1434192 PF00005 ABC transporter Glyma12g02300 Gm12 1440777 1447405 PF00005 ABC transporter Glyma12g02310 Gm12 1451074 1455886 Glyma12g02320 Gm12 1459648 1463957 PF04055 Radical SAM superfamily Glyma12g02330 Gm12 1465195 1482318 PF00133 tRNA synthetases class I (I, L, M and V) Glyma12g02340 Gm12 1487926 1490790 PF00380 Ribosomal protein S9/S16 Glyma12g02350 Gm12 1495636 1496778 Glyma12g02380 Gm12 1507441 1514628 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Glyma12g02400 Gm12 1519605 1522329 Glyma12g02410 Gm12 1523091 1526023 PF00332 Glycosyl hydrolases family 17 Glyma12g02420 Gm12 1530872 1541596 PF00515 Glyma12g02430 Gm12 1542368 1547064 PF03435 Saccharopine dehydrogenase Glyma12g02440 Gm12 1549356 1556292 PF01602 Adaptin N terminal region Glyma12g02450 Gm12 1561621 1565824 PF00349 Hexokinase Glyma12g02460 Gm12 1568077 1569931 PF00179 Ubiquitin-conjugating enzyme Glyma12g02470 Gm12 1571996 1583649 PF02791 DDT domain Glyma12g02480 Gm12 1592251 1592533 PF00234 Protease inhibitor/seed storage/LTP family Glyma12g02490 Gm12 1596374 1599101 PF03514 GRAS family transcription factor 118

Glyma12g02500 Gm12 1602302 1610480 PF01529 DHHC zinc finger domain Glyma12g02510 Gm12 1615331 1624498 PF00202 Aminotransferase class-III

Glyma12g02520 Gm12 1634498 1644059 PF04508 Viral A-type inclusion protein repeat Glyma12g02530 Gm12 1648528 1649941 PF03514 GRAS family transcription factor Glyma12g02540 Gm12 1655863 1658091 PF02365 No apical meristem (NAM) protein Glyma12g02550 Gm12 1670873 1672739 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel Glyma12g02560 Gm12 1677079 1677377 PF02519 Auxin responsive protein Glyma12g02570 Gm12 1679749 1680174 PF02519 Auxin responsive protein Glyma12g02580 Gm12 1690657 1694597 PF01490 Transmembrane amino acid transporter protein Glyma12g02590 Gm12 1696797 1699561 PF03168 Late embryogenesis abundant protein Glyma12g02610 Gm12 1706756 1710658 PF07732 Multicopper oxidase Glyma12g02620 Gm12 1714159 1717538 PF03759 PRONE (Plant-specific Rop nucleotide exchanger) Glyma12g02630 Gm12 1724451 1728562 Glyma12g02640 Gm12 1729006 1730580 PF00230 Major intrinsic protein Glyma12g02650 Gm12 1731592 1732099 Glyma12g02670 Gm12 1736681 1738245 PF00195 Chalcone and stilbene synthases, N-terminal domain Glyma12g02680 Gm12 1738747 1742048 PF00810 ER lumen protein retaining receptor Glyma12g02690 Gm12 1743240 1751308 PF04853 Plant neutral invertase Glyma12g02720 Gm12 1758030 1759211 Glyma12g02730 Gm12 1759661 1760205 Glyma12g02740 Gm12 1763215 1765753 PF00010 Helix -loop-helix DNA-binding domain Glyma12g02750 Gm12 1768141 1772178 Glyma12g02760 Gm12 1778883 1783668 Glyma12g02770 Gm12 1786729 1798176 Glyma12g02790 Gm12 1802211 1803279 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Glyma12g02800 Gm12 1806337 1809518 PF01981 Peptidyl-tRNA hydrolase PTH2 Glyma12g02810 Gm12 1813565 1816027 PF01535 PPR repeat Glyma12g02820 Gm12 1818504 1821222 PF03587 EMG1/NEP1 methyltransferase Glyma12g02830 Gm12 1823174 1823632 PF00036 EF hand Glyma12g02840 Gm12 1826656 1828181 PF05743 UEV domain Glyma12g02850 Gm12 1832126 1833148 PF00542 Ribosomal protein L7/L12 C-terminal domain Glyma12g02860 Gm12 1834674 1835125 PF02966 Mitosis protein DIM1 Glyma12g02870 Gm12 1838032 1838422 Glyma12g02880 Gm12 1840118 1847991 PF00450 Serine carboxypeptidase Glyma12g02890 Gm12 1852155 1855802 PF00098 Zinc knuckle Glyma12g02900 Gm12 1858005 1864204 PF00400 WD domain, G-beta repeat Glyma12g02910 Gm12 1868178 1873699 PF00450 Serine carboxypeptidase Glyma12g02920 Gm12 1878260 1880770 Glyma12g02960 Gm12 1898730 1900287 PF00574 Clp protease Glyma12g02980 Gm12 1908619 1918767 PF00855 PWWP domain Glyma12g02990 Gm12 1925509 1926832 119

Glyma12g03000 Gm12 1928304 1932100 PF04427 Brix domain Glyma12g03020 Gm12 1933802 1937664 PF02012 BNR/Asp-box repeat

Glyma12g03030 Gm12 1940990 1942438 PF01485 IBR domain Glyma12g03040 Gm12 1947181 1950955 PF01582 TIR domain Glyma12g03050 Gm12 1957322 1961443 PF00759 Glycosyl hydrolase family 9 Glyma12g03060 Gm12 1961916 1967262 Glyma12g03070 Gm12 1973461 1979141 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Glyma12g03080 Gm12 1983810 2001077 PF00004 ATPase family associated with various cellular activities (AAA) Glyma12g03090 Gm12 2001887 2024133 PF00069 Protein kinase domain Glyma12g03120 Gm12 2027701 2029644 PF00702 haloacid dehalogenase-like hydrolase Glyma12g03130 Gm12 2031049 2049177 PF07719 Tetratricopeptide repeat Glyma12g03140 Gm12 2051132 2067880 PF01411 tRNA synthetases class II (A) Glyma12g03160 Gm12 2072161 2076033 Glyma12g03170 Gm12 2077067 2078327 Glyma12g03180 Gm12 2080643 2094871 PF00397 WW domain Glyma12g03200 Gm12 2096156 2103049 PF00168 C2 domain Glyma12g03210 Gm12 2106354 2109916 PF01565 FAD binding domain Glyma12g03220 Gm12 2119737 2123980 PF03167 Uracil DNA glycosylase superfamily Glyma12g03230 Gm12 2125885 2127937 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Glyma12g03250 Gm12 2132981 2140640 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma12g03260 Gm12 2143759 2147422 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Glyma12g03270 Gm12 2150616 2160062 Glyma12g03280 Gm12 2160601 2164257 Glyma12g03290 Gm12 2166396 2174525 Glyma12g03300 Gm12 2174676 2177765 PF03000 NPH3 family Glyma12g03320 Gm12 2192749 2200805 PF00169 PH domain Glyma12g03340 Gm12 2206394 2208120 Glyma12g03350 Gm12 2209090 2212068 PF03171 2OG -Fe(II) oxygenase superfamily Glyma12g03360 Gm12 2215447 2221678 PF12579 Protein of unknown function (DUF3755) Glyma12g03370 Gm12 2232006 2236263 PF00560 Leucine Rich Repeat Glyma12g03390 Gm12 2246302 2249581 PF05653 Protein of unknown function (DUF803) Glyma12g03400 Gm12 2250749 2253175 PF06273 Plant specific eukaryotic initiation factor 4B Glyma12g03410 Gm12 2254231 2256611 Glyma12g03420 Gm12 2259772 2260528 PF03018 Dirigent -like protein Glyma12g03440 Gm12 2267094 2268928 PF01535 PPR repeat Glyma12g03450 Gm12 2270412 2272064 Glyma12g03460 Gm12 2279754 2280547 PF00226 DnaJ domain Glyma12g03470 Gm12 2290858 2291808 PF00313 'Cold-shock' DNA-binding domain Glyma12g03490 Gm12 2303252 2307468 PF01490 Transmembrane amino acid transporter protein Glyma12g03500 Gm12 2317591 2320961 PF00314 Thaumatin family Glyma12g03510 Gm12 2327107 2329878 PF00314 Thaumatin family 120

Glyma12g03520 Gm12 2332954 2336801 PF06813 Nodulin-like Glyma12g03540 Gm12 2349948 2355775 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD

Glyma12g03550 Gm12 2357875 2362159 PF04515 Plasma-membrane choline transporter Glyma12g03560 Gm12 2370488 2371978 PF00241 Cofilin/tropomyosin-type -binding protein Glyma12g03570 Gm12 2383084 2386149 PF05922 Peptidase inhibitor I9 Glyma12g03580 Gm12 2387779 2391245 PF01490 Transmembrane amino acid transporter protein Glyma12g03600 Gm12 2412543 2413869 PF00249 Myb-like DNA-binding domain Glyma12g03610 Gm12 2416833 2422621 PF00141 Peroxidase Glyma12g03620 Gm12 2424830 2434945 PF00168 C2 domain Glyma12g03640 Gm12 2443960 2454583 PF00514 Armadillo/beta-catenin-like repeat Glyma12g03650 Gm12 2457168 2462319 PF01301 Glycosyl hydrolases family 35 Glyma12g03660 Gm12 2472483 2475390 PF00071 Ras family Glyma12g03670 Gm12 2475999 2477498 PF00179 Ubiquitin-conjugating enzyme Glyma12g03680 Gm12 2484113 2487310 PF00069 Protein kinase domain Glyma12g03690 Gm12 2490787 2493552 PF07716 Basic region leucine zipper Glyma12g03700 Gm12 2494992 2497821 PF12265 Histone-binding protein RBBP4 or subunit C of CAF1 complex Glyma12g03710 Gm12 2500077 2500811 PF00403 Heavy-metal-associated domain Glyma12g03730 Gm12 2508495 2510159 Glyma12g03740 Gm12 2517685 2521483 PF01066 CDP -alcohol phosphatidyltransferase Glyma12g03750 Gm12 2523768 2526090 PF03824 High-affinity nickel-transport protein Glyma12g03760 Gm12 2531358 2540934 PF01535 PPR repeat Glyma12g03770 Gm12 2542874 2543239 PF02519 Auxin responsive protein Glyma12g03780 Gm12 2556105 2556965 PF02519 Auxin responsive protein Glyma12g03800 Gm12 2561940 2562125 PF02519 Auxin responsive protein Glyma12g03810 Gm12 2563335 2563672 PF02519 Auxin responsive protein Glyma12g03820 Gm12 2564793 2565071 PF02519 Auxin responsive protein Glyma12g03830 Gm12 2567668 2567928 PF02519 Auxin responsive protein Glyma12g03840 Gm12 2569916 2570188 PF02519 Auxin responsive protein Glyma12g03850 Gm12 2571410 2571776 PF02519 Auxin responsive protein Glyma12g03860 Gm12 2581001 2581405 PF02519 Auxin responsive protein Glyma12g03870 Gm12 2582732 2583265 PF02519 Auxin responsive protein Glyma12g03880 Gm12 2583864 2584097 Glyma12g03890 Gm12 2585983 2586187 PF02519 Auxin responsive protein Glyma12g03900 Gm12 2587257 2587538 PF02519 Auxin responsive protein Glyma12g03910 Gm12 2590067 2590427 PF02519 Auxin responsive protein Glyma12g03920 Gm12 2591280 2591713 PF02519 Auxin responsive protein Glyma12g03930 Gm12 2593424 2593861 PF02519 Auxin responsive protein Glyma12g03950 Gm12 2595812 2596156 PF02519 Auxin responsive protein Glyma12g03960 Gm12 2597102 2597540 PF02519 Auxin responsive protein Glyma12g03980 Gm12 2601575 2604593 PF03366 YEATS family Glyma12g03990 Gm12 2610329 2611247 PF02519 Auxin responsive protein 121

Glyma12g04000 Gm12 2625164 2625987 PF02519 Auxin responsive protein Glyma12g04010 Gm12 2632686 2634655 PF01866 Putative diphthamide synthesis protein

Glyma12g04020 Gm12 2636160 2637798 Glyma12g04030 Gm12 2642085 2643221 PF00310 Glutamine amidotransferases class-II Glyma12g04040 Gm12 2646032 2647752 PF00310 Glutamine amidotransferases class-II Glyma12g04050 Gm12 2651129 2655652 PF07716 Basic region leucine zipper Glyma12g04070 Gm12 2664086 2667901 Glyma12g04080 Gm12 2668935 2671508 PF00248 Aldo/keto reductase family Glyma12g04090 Gm12 2671936 2673461 PF00137 ATP synthase subunit C Glyma12g04100 Gm12 2674858 2681745 PF01370 NAD dependent epimerase/dehydratase family Glyma12g04110 Gm12 2679657 2682676 PF00083 Sugar (and other) transporter Glyma12g04120 Gm12 2685771 2692981 PF00225 Kinesin motor domain Glyma12g04130 Gm12 2702607 2705580 PF00643 B-box zinc finger Glyma12g04150 Gm12 2712999 2715780 PF00274 Fructose-bisphosphate aldolase class-I Glyma12g04160 Gm12 2718736 2721546 PF01535 PPR repeat Glyma12g04170 Gm12 2721939 2724851 Glyma12g04180 Gm12 2731950 2733053 PF00320 GATA zinc finger Glyma12g04190 Gm12 2738977 2740975 Glyma12g04200 Gm12 2741770 2745492 PF02225 PA domain Glyma12g04210 Gm12 2750543 2753726 PF07653 Variant SH3 domain Glyma12g04220 Gm12 2754774 2760952 PF00494 Squalene/phytoene synthase Glyma12g04250 Gm12 2780449 2784236 Glyma12g04260 Gm12 2792905 2805017 PF00225 Kinesin motor domain Glyma12g04270 Gm12 2807489 2808529 PF00643 B-box zinc finger Glyma12g04280 Gm12 2811061 2815173 Glyma12g04290 Gm12 2819465 2824471 PF00400 WD domain, G-beta repeat Glyma12g04300 Gm12 2827231 2828113 Glyma12g04310 Gm12 2832021 2833072 PF05142 Domain of unknown function (DUF702) Glyma12g04320 Gm12 2840182 2845611 PF00493 MCM2/3/5 family Glyma12g04330 Gm12 2849882 2860725 PF01496 V-type ATPase 116kDa subunit family Glyma12g04340 Gm12 2862610 2865406 PF08246 Cathepsin propeptide inhibitor domain (I29) Glyma12g04350 Gm12 2865667 2867127 PF09811 Essential protein Yae1, N terminal Glyma12g04360 Gm12 2868245 2869272 PF07839 Plant calmodulin-binding domain Glyma12g04370 Gm12 2874663 2879427 Glyma12g04380 Gm12 2881368 2884213 PF01849 NAC domain Glyma12g04390 Gm12 2885532 2889187 PF08263 Leucine rich repeat N-terminal domain Glyma12g04400 Gm12 2896922 2901866 PF08156 NOP5NT (NUC127) domain Glyma12g04410 Gm12 2904183 2906319 PF01991 ATP synthase (E/31 kDa) subunit Glyma12g04420 Gm12 2907532 2909956 PF00514 Armadillo/beta-catenin-like repeat Glyma12g04430 Gm12 2916235 2923433 PF00928 Adaptor complexes medium subunit family Glyma12g04440 Gm12 2936060 2936542 PF00170 bZIP transcription factor 122

Glyma12g04460 Gm12 2964457 2969871 PF03765 CRAL/TRIO, N-terminus Glyma12g04480 Gm12 2982711 2987078 PF00186 Dihydrofolate reductase

Glyma12g04490 Gm12 2991126 2993425 PF00004 ATPase family associated with various cellular activities (AAA) Glyma12g04500 Gm12 2997295 2998448 Glyma12g04510 Gm12 3001724 3004990 PF03297 S25 ribosomal protein Glyma12g04520 Gm12 3005219 3006091 PF03087 Arabidopsis protein of unknown function Glyma12g04530 Gm12 3013321 3014114 PF03087 Arabidopsis protein of unknown function Glyma12g04550 Gm12 3018215 3019252 PF03087 Arabidopsis protein of unknown function Glyma12g04560 Gm12 3020821 3021782 PF03087 Arabidopsis protein of unknown function Glyma12g04570 Gm12 3024019 3026466 PF03087 Arabidopsis protein of unknown function Glyma12g04580 Gm12 3030506 3031360 PF03087 Arabidopsis protein of unknown function Glyma12g04590 Gm12 3034042 3034920 PF03087 Arabidopsis protein of unknown function Glyma12g11080 Gm12 9098563 9099770 Glyma12g11090 Gm12 9100251 9101029 PF06749 Protein of unknown function (DUF1218) Glyma12g11100 Gm12 9110600 9111889 PF06749 Protein of unknown function (DUF1218) Glyma12g11110 Gm12 9114066 9118488 PF02181 Formin Homology 2 Domain Glyma12g11120 Gm12 9132440 9134545 PF01535 PPR repeat Glyma12g11130 Gm12 9136123 9138961 PF01373 Glycosyl hydrolase family 14 Glyma12g11140 Gm12 9146909 9147180 Glyma12g11150 Gm12 9150879 9152781 PF00847 AP2 domain Glyma12g11160 Gm12 9181141 9181340 Glyma12g11170 Gm12 9193893 9194592 PF08241 Methyltransferase domain Glyma12g11180 Gm12 9199727 9202227 PF00646 F-box domain Glyma12g11200 Gm12 9215750 9220045 PF03321 GH3 auxin-responsive promoter Glyma12g11210 Gm12 9236732 9237644 PF00036 EF hand Glyma12g11220 Gm12 9242839 9247614 PF01453 D-mannose binding lectin Glyma12g11230 Gm12 9266578 9267715 PF00643 B-box zinc finger Glyma12g11240 Gm12 9305023 9307620 PF00560 Leucine Rich Repeat Glyma12g11250 Gm12 9309981 9312222 PF07522 DNA repair metallo-beta-lactamase Glyma12g11260 Gm12 9328883 9331530 PF01453 D-mannose binding lectin Glyma12g11270 Gm12 9341665 9343344 Glyma12g11280 Gm12 9357184 9360593 PF00232 Glycosyl hydrolase family 1 Glyma12g11330 Gm12 9432468 9434604 PF00249 Myb-like DNA-binding domain Glyma12g11340 Gm12 9453747 9454713 PF00249 Myb-like DNA-binding domain Glyma12g11390 Gm12 9469066 9470494 PF00249 Myb-like DNA-binding domain Glyma12g11490 Gm12 9561420 9563024 PF00249 Myb-like DNA-binding domain Glyma12g11510 Gm12 9599851 9602411 PF00134 Cyclin, N-terminal domain Glyma12g11540 Gm12 9620075 9623378 PF01733 Nucleoside transporter Glyma12g11560 Gm12 9638957 9640899 Glyma12g11600 Gm12 9684204 9685560 PF00249 Myb -like DNA-binding domain Glyma12g11610 Gm12 9699773 9701405 PF00609 Diacylglycerol kinase accessory domain 123

Glyma12g11620 Gm12 9702348 9706033 PF11264 Thylakoid formation protein Glyma12g11650 Gm12 9731394 9731624 PF12609 Wound-induced protein

Glyma12g11660 Gm12 9740528 9740993 PF12609 Wound-induced protein Glyma12g11670 Gm12 9752640 9755442 PF00635 MSP (Major sperm protein) domain Glyma12g11680 Gm12 9762067 9768052 PF00070 Pyridine nucleotide-disulphide oxidoreductase Glyma12g11690 Gm12 9770002 9775213 PF07992 Pyridine nucleotide-disulphide oxidoreductase Glyma12g11700 Gm12 9780053 9782773 Glyma12g11730 Gm12 9798542 9800383 PF04484 Family of unknown function (DUF566) Glyma12g11740 Gm12 9801875 9802113 PF12609 Wound-induced protein Glyma12g11760 Gm12 9809130 9811478 Glyma12g11770 Gm12 9812061 9814263 Glyma12g11780 Gm12 9821111 9825893 PF02485 Core -2/I-Branching enzyme Glyma12g11800 Gm12 9873954 9878473 Glyma12g11810 Gm12 9879962 9882062 PF04410 Gar1/Naf1 RNA binding region Glyma12g11820 Gm12 9886816 9893873 PF04144 SCAMP family Glyma12g11830 Gm12 9895453 9896969 Glyma12g11840 Gm12 9900751 9906124 PF07714 Protein tyrosine kinase Glyma12g11850 Gm12 9947457 9948245 Glyma12g11860 Gm12 9951401 9953793 Glyma12g11890 Gm12 10025896 10030666 PF03321 GH3 auxin-responsive promoter Glyma12g12100 Gm12 10154988 10157115 Glyma12g12130 Gm12 10164607 10171295 Glyma12g12140 Gm12 10186740 10189045 PF10536 Plant mobile domain Glyma12g12180 Gm12 10244817 10248790 PF00481 Protein phosphatase 2C Glyma12g12190 Gm12 10338798 10343057 PF05623 Protein of unknown function (DUF789) Glyma12g12200 Gm12 10351256 10353511 Glyma12g12210 Gm12 10354488 10357735 PF04727 ELMO/CED -12 family Glyma12g12230 Gm12 10393855 10400043 PF08100 Dimerisation domain Glyma12g12260 Gm12 10436733 10437712 Glyma12g12270 Gm12 10459654 10460658 PF00847 AP2 domain Glyma12g12290 Gm12 10493892 10496386 PF00083 Sugar (and other) transporter Glyma12g12300 Gm12 10501384 10503751 PF00561 alpha/beta hydrolase fold Glyma12g12330 Gm12 10535314 10538591 PF05147 Lanthionine synthetase C-like protein Glyma12g12340 Gm12 10541298 10542933 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel Glyma12g12350 Gm12 10570402 10575486 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel Glyma12g12360 Gm12 10590261 10591070 PF05970 PIF1 helicase Glyma12g12400 Gm12 10645149 10650500 PF00023 Ankyrin repeat Glyma12g12460 Gm12 10705767 10707110 PF00023 Ankyrin repeat Glyma12g12470 Gm12 10709217 10710099 PF00023 Ankyrin repeat Glyma12g12530 Gm12 10762253 10766580 PF00335 Tetraspanin family Glyma12g12540 Gm12 10768260 10769687 PF00583 Acetyltransferase (GNAT) family 124

Glyma12g12560 Gm12 10783565 10783914 PF02517 CAAX amino terminal protease family Glyma12g12570 Gm12 10793850 10794740

Glyma12g12600 Gm12 10831684 10833223 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma12g12640 Gm12 10873527 10878593 PF00023 Ankyrin repeat Glyma12g12650 Gm12 10881287 10884534 Glyma12g12660 Gm12 10922006 10922400 Glyma12g12670 Gm12 10938163 10939000 Glyma12g12710 Gm12 10990795 10992013 PF00677 Lumazine binding domain Glyma12g12720 Gm12 10993571 10994672 Glyma12g12730 Gm12 11005109 11006429 PF04535 Domain of unknown function (DUF588) Glyma12g12740 Gm12 11014151 11020532 PF07223 Protein of unknown function (DUF1421) Glyma12g12750 Gm12 11053525 11058367 Glyma12g12770 Gm12 11061666 11065864 Glyma12g12780 Gm12 11074837 11077414 Glyma12g12790 Gm12 11087770 11090088 Glyma12g12800 Gm12 11092450 11094778 PF12146 Putative lysophospholipase Glyma12g12810 Gm12 11095500 11096970 Glyma12g12830 Gm12 11177179 11183050 PF00069 Protein kinase domain Glyma12g12850 Gm12 11198325 11200511 PF00139 Legume lectin domain Glyma12g12870 Gm12 11215879 11219332 PF04720 Protein of unknown function (DUF506) Glyma12g12880 Gm12 11274997 11276242 PF00010 Helix-loop-helix DNA-binding domain Glyma12g12920 Gm12 11306320 11309267 PF03936 Terpene synthase family, metal binding domain Glyma12g12940 Gm12 11317828 11319373 Glyma12g12950 Gm12 11321582 11325746 PF01979 Amidohydrolase family Glyma12g12960 Gm12 11326621 11329978 PF06644 ATP11 protein Glyma12g13020 Gm12 11383867 11388007 Glyma12g13060 Gm12 11430987 11432841 PF00646 F -box domain Glyma12g13070 Gm12 11435638 11436904 PF00069 Protein kinase domain Glyma12g13090 Gm12 11449261 11449689 PF00011 Hsp20/alpha crystallin family Glyma12g13100 Gm12 11462264 11463086 Glyma12g13130 Gm12 11482252 11484051 PF02298 Plastocyanin -like domain Glyma12g13180 Gm12 11525193 11531770 PF00176 SNF2 family N-terminal domain Glyma12g13190 Gm12 11535992 11542494 PF02996 Prefoldin subunit Glyma12g13220 Gm12 11554875 11565080 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma12g13230 Gm12 11566031 11567120 PF08263 Leucine rich repeat N-terminal domain Glyma12g13240 Gm12 11571302 11574267 PF00153 Mitochondrial carrier protein Glyma12g13250 Gm12 11579762 11580541 Glyma12g13260 Gm12 11581829 11583766 PF08311 Mad3/BUB1 homology region 1 Glyma12g13270 Gm12 11589537 11595918 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma12g13280 Gm12 11600236 11605072 PF12214 Cell cycle regulated microtubule associated protein Glyma12g13290 Gm12 11630202 11633187 PF00481 Protein phosphatase 2C 125

Glyma12g13300 Gm12 11639275 11640555 PF00642 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Glyma12g13320 Gm12 11676847 11677860 PF00847 AP2 domain

Glyma12g13340 Gm12 11705689 11707281 PF02453 Reticulon Glyma12g13360 Gm12 11751726 11756404 PF04117 Mpv17 / PMP22 family Glyma12g13380 Gm12 11822745 11824722 Glyma12g13390 Gm12 11827794 11830515 Glyma12g13410 Gm12 11843012 11850347 PF01851 Proteasome/cyclosome repeat Glyma12g13430 Gm12 11884222 11889081 PF00249 Myb-like DNA-binding domain Glyma12g13440 Gm12 11897981 11900572 PF00098 Zinc knuckle Glyma12g13470 Gm12 11980251 11980895 Glyma12g13490 Gm12 12018086 12021906 Glyma12g13500 Gm12 12025574 12027113 PF00226 DnaJ domain Glyma12g13560 Gm12 12069676 12070440 PF00319 SRF-type transcription factor (DNA-binding and dimerisation domain) Glyma12g13580 Gm12 12120808 12123221 PF01535 PPR repeat Glyma12g13700 Gm12 12282470 12285744 PF00560 Leucine Rich Repeat Glyma12g13710 Gm12 12296230 12298781 PF02365 No apical meristem (NAM) protein Glyma12g13810 Gm12 12454565 12457359 PF00096 Zinc finger, C2H2 type Glyma12g13820 Gm12 12468958 12470029 Glyma12g13830 Gm12 12502572 12505021 Glyma12g13840 Gm12 12505791 12507102 Glyma12g13860 Gm12 12511193 12512197 PF00168 C2 domain Glyma12g13920 Gm12 12547227 12548075 PF00462 Glutaredoxin Glyma12g13950 Gm12 12590133 12592745 Glyma12g13960 Gm12 12617065 12618911 Glyma12g13980 Gm12 12626430 12627924 PF08100 Dimerisation domain Glyma12g14000 Gm12 12674548 12682453 PF04874 Mak16 protein C-terminal region Glyma12g14010 Gm12 12700499 12700861 PF07047 Optic atrophy 3 protein (OPA3) Glyma12g14030 Gm12 12724421 12728390 Glyma12g14050 Gm12 12738114 12740227 Glyma12g14060 Gm12 12742599 12748380 PF02770 Acyl -CoA dehydrogenase, middle domain Glyma12g14070 Gm12 12759420 12762741 PF00071 Ras family Glyma12g14080 Gm12 12776631 12786532 PF00009 Elongation factor Tu GTP binding domain Glyma12g14090 Gm12 12800183 12802413 PF00071 Ras family Glyma12g14100 Gm12 12806493 12806887 PF03195 Protein of unknown function DUF260 Glyma12g14110 Gm12 12812499 12816809 Glyma12g14120 Gm12 12817670 12818971 PF08246 Cathepsin propeptide inhibitor domain (I29) Glyma12g14130 Gm12 12825284 12828072 PF07716 Basic region leucine zipper Glyma12g14140 Gm12 12849913 12851364 Glyma12g14160 Gm12 12880099 12881310 PF07983 X8 domain Glyma12g14190 Gm12 12931274 12932041 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma12g14200 Gm12 12985348 12986868 PF03634 TCP family transcription factor 126

Glyma12g14230 Gm12 13024440 13028370 PF07732 Multicopper oxidase Glyma12g14270 Gm12 13155914 13158240

Glyma12g14310 Gm12 13199868 13205297 PF00439 Bromodomain Glyma12g14320 Gm12 13205779 13206204 Glyma12g14340 Gm12 13247180 13251933 PF03005 Arabidopsis proteins of unknown function Glyma12g14350 Gm12 13271545 13276594 Glyma12g14360 Gm12 13315077 13320869 PF08241 Methyltransferase domain Glyma12g14400 Gm12 13349384 13351200 PF00010 Helix-loop-helix DNA-binding domain Glyma12g14420 Gm12 13387426 13391456 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain Glyma12g14460 Gm12 13415227 13416551 Glyma12g14480 Gm12 13422324 13425674 PF08263 Leucine rich repeat N-terminal domain Glyma12g14510 Gm12 13448386 13458877 Glyma12g14530 Gm12 13461156 13466512 PF08263 Leucine rich repeat N-terminal domain Glyma12g14540 Gm12 13561234 13562268 PF08246 Cathepsin propeptide inhibitor domain (I29) Glyma12g14550 Gm12 13565648 13566658 PF00112 Papain family cysteine protease Glyma12g14560 Gm12 13567203 13567396 PF02519 Auxin responsive protein Glyma12g14570 Gm12 13589705 13589950 PF02519 Auxin responsive protein Glyma12g14580 Gm12 13591080 13591355 PF02519 Auxin responsive protein Glyma12g14600 Gm12 13608208 13608723 PF02519 Auxin responsive protein Glyma12g14610 Gm12 13611504 13617853 PF08246 Cathepsin propeptide inhibitor domain (I29) Glyma12g14620 Gm12 13614952 13615622 PF02519 Auxin responsive protein Glyma12g14660 Gm12 13634070 13634304 PF02519 Auxin responsive protein Glyma12g14670 Gm12 13635438 13635690 PF02519 Auxin responsive protein Glyma12g14680 Gm12 13641617 13641812 PF02519 Auxin responsive protein Glyma12g14690 Gm12 13642549 13642743 PF02519 Auxin responsive protein Glyma12g14700 Gm12 13651303 13654194 PF00931 NB-ARC domain Glyma12g14720 Gm12 13661795 13662008 PF02519 Auxin responsive protein Glyma12g14730 Gm12 13663323 13663517 PF02519 Auxin responsive protein Glyma12g14750 Gm12 13667780 13668270 PF02519 Auxin responsive protein Glyma12g14760 Gm12 13669073 13669425 PF02519 Auxin responsive protein Glyma12g14800 Gm12 13681208 13681414 PF02519 Auxin responsive protein Glyma12g14810 Gm12 13687220 13687492 PF02519 Auxin responsive protein Glyma12g14820 Gm12 13688567 13688742 PF02519 Auxin responsive protein Glyma12g14890 Gm12 13728374 13729088 PF02519 Auxin responsive protein Glyma12g14900 Gm12 13729366 13729868 PF02519 Auxin responsive protein Glyma12g14910 Gm12 13730885 13732385 PF02519 Auxin responsive protein Glyma12g14920 Gm12 13731506 13733192 PF02519 Auxin responsive protein Glyma12g14930 Gm12 13734096 13735653 PF00112 Papain family cysteine protease Glyma12g14940 Gm12 13744084 13744359 PF02519 Auxin responsive protein Glyma12g14950 Gm12 13750081 13750353 PF02519 Auxin responsive protein Glyma12g14960 Gm12 13754485 13754757 PF02519 Auxin responsive protein 127

Glyma12g14970 Gm12 13758726 13759146 Glyma12g14980 Gm12 13759852 13760104 PF02519 Auxin responsive protein

Glyma12g14990 Gm12 13761512 13761926 PF02519 Auxin responsive protein Glyma12g15000 Gm12 13762691 13762898 PF02519 Auxin responsive protein Glyma12g15020 Gm12 13787090 13787749 PF02519 Auxin responsive protein Glyma12g15030 Gm12 13788289 13788519 PF02519 Auxin responsive protein Glyma12g15040 Gm12 13789345 13789557 PF02519 Auxin responsive protein Glyma12g15060 Gm12 13794060 13795165 PF01394 Clathrin propeller repeat Glyma12g15090 Gm12 13803629 13804180 PF02519 Auxin responsive protein Glyma12g15110 Gm12 13808755 13808983 PF02519 Auxin responsive protein Glyma12g15120 Gm12 13809495 13810505 PF00112 Papain family cysteine protease Glyma12g15130 Gm12 13814664 13815771 PF08246 Cathepsin propeptide inhibitor domain (I29) Glyma12g15140 Gm12 13816179 13817140 Glyma12g15170 Gm12 13874543 13875468 PF05641 Agenet domain Glyma12g15210 Gm12 13900715 13901754 Glyma12g15250 Gm12 13987155 13990701 PF04852 Protein of unknown function (DUF640) Glyma12g15260 Gm12 14005705 14013705 PF02992 Transposase family tnp2 Glyma12g15290 Gm12 14067279 14068233 PF00249 Myb-like DNA-binding domain Glyma12g15330 Gm12 14140918 14141495 PF06749 Protein of unknown function (DUF1218) Glyma12g15360 Gm12 14154665 14156980 Glyma12g15370 Gm12 14157140 14167296 PF07714 Protein tyrosine kinase Glyma12g15390 Gm12 14185146 14189115 PF05097 Protein of unknown function (DUF688) Glyma12g15400 Gm12 14199533 14206378 PF07847 Protein of unknown function (DUF1637) Glyma12g15410 Gm12 14239146 14240827 PF01381 Helix-turn-helix Glyma12g15420 Gm12 14255541 14258642 PF08523 Multiprotein bridging factor 1 Glyma12g15430 Gm12 14262412 14263900 PF01764 Lipase (class 3) Glyma12g15440 Gm12 14292544 14300148 Glyma12g15450 Gm12 14301976 14310828 PF00687 Ribosomal protein L1p/L10e family Glyma12g15460 Gm12 14319555 14323060 PF00141 Peroxidase Glyma12g15470 Gm12 14327264 14332559 PF00069 Protein kinase domain Glyma12g15500 Gm12 14397971 14402138 PF00982 Glycosyltransferase family 20 Glyma12g15530 Gm12 14449151 14450037 Glyma12g15560 Gm12 14459127 14464419 PF00226 DnaJ domain Glyma12g15570 Gm12 14466237 14472175 Glyma12g15620 Gm12 14532066 14535169 PF00232 Glycosyl hydrolase family 1 Glyma12g15650 Gm12 14554226 14555714 PF08246 Cathepsin propeptide inhibitor domain (I29) Glyma12g15660 Gm12 14611924 14612938 PF08246 Cathepsin propeptide inhibitor domain (I29) Glyma12g15680 Gm12 14655410 14656776 PF08246 Cathepsin propeptide inhibitor domain (I29) Glyma12g15690 Gm12 14657968 14659194 PF08246 Cathepsin propeptide inhibitor domain (I29) Glyma12g15710 Gm12 14675948 14676163 Glyma12g15730 Gm12 14687393 14692215 PF08246 Cathepsin propeptide inhibitor domain (I29) 128

Glyma12g15740 Gm12 14725903 14726849 PF08246 Cathepsin propeptide inhibitor domain (I29) Glyma12g15750 Gm12 14728996 14730002 PF08246 Cathepsin propeptide inhibitor domain (I29)

Glyma12g15760 Gm12 14750170 14751395 PF08246 Cathepsin propeptide inhibitor domain (I29) Glyma12g15780 Gm12 14767082 14768307 PF08246 Cathepsin propeptide inhibitor domain (I29) Glyma12g15790 Gm12 14790447 14791742 PF08246 Cathepsin propeptide inhibitor domain (I29) Glyma12g15800 Gm12 14793480 14795416 PF00281 Ribosomal protein L5 Glyma12g15810 Gm12 14800267 14800834 PF00628 PHD-finger Glyma12g15820 Gm12 14809994 14812480 Glyma12g15840 Gm12 14828996 14830543 Glyma12g15850 Gm12 14832919 14843691 PF01582 TIR domain Glyma12g15860 Gm12 14855138 14860643 PF01582 TIR domain Glyma12g15870 Gm12 14883700 14885380 Glyma12g15890 Gm12 14900798 14902254 PF00069 Protein kinase domain Glyma12g15940 Gm12 14940195 14944872 PF00732 GMC oxidoreductase Glyma12g15960 Gm12 14982101 14985620 PF01582 TIR domain Glyma12g16030 Gm12 15045417 15046500 Glyma12g16040 Gm12 15109004 15113953 PF02386 Cation transport protein Glyma12g16090 Gm12 15159357 15166478 PF03109 ABC1 family Glyma12g16120 Gm12 15232072 15233454 PF00141 Peroxidase Glyma18g02720 Gm18 1744224 1748945 PF04851 Type III restriction enzyme, res subunit Glyma18g02740 Gm18 1769608 1773091 Glyma18g02750 Gm18 1775283 1782238 Glyma18g02760 Gm18 1784034 1788659 PF00270 DEAD/DEAH box helicase Glyma18g02770 Gm18 1794668 1801858 PF03644 Glycosyl hydrolase family 85 Glyma18g02780 Gm18 1810348 1811210 PF03195 Protein of unknown function DUF260 Glyma18g02800 Gm18 1821344 1824454 PF00210 Ferritin-like domain Glyma18g02810 Gm18 1830185 1835078 PF00328 Histidine acid phosphatase Glyma18g02820 Gm18 1836901 1840383 PF00575 S1 RNA binding domain Glyma18g02830 Gm18 1842530 1844815 PF03141 Putative methyltransferase Glyma18g02840 Gm18 1848499 1849220 PF00462 Glutaredoxin Glyma18g02850 Gm18 1859798 1863799 PF08263 Leucine rich repeat N-terminal domain Glyma18g02870 Gm18 1866703 1867488 PF01190 Pollen proteins Ole e I like Glyma18g02880 Gm18 1867631 1870115 PF08311 Mad3/BUB1 homology region 1 Glyma18g02890 Gm18 1871204 1875716 PF07244 Surface antigen variable number repeat Glyma18g02900 Gm18 1878783 1886910 Glyma18g02910 Gm18 1892655 1893549 PF03195 Protein of unknown function DUF260 Glyma18g02920 Gm18 1910746 1911749 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma18g02940 Gm18 1920857 1922256 PF00010 Helix-loop-helix DNA-binding domain Glyma18g02950 Gm18 1928001 1930046 Glyma18g02960 Gm18 1931800 1944080 PF01394 Clathrin propeller repeat Glyma18g02970 Gm18 1945752 1947611 PF00687 Ribosomal protein L1p/L10e family 129

Glyma18g02980 Gm18 1952653 1955913 PF03005 Arabidopsis proteins of unknown function Glyma18g03000 Gm18 1958408 1959629 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase

Glyma18g03020 Gm18 1968204 1971653 PF03171 2OG-Fe(II) oxygenase superfamily Glyma18g03030 Gm18 1981023 1986457 Glyma18g03040 Gm18 2013254 2015768 PF00069 Protein kinase domain Glyma18g03080 Gm18 2024710 2032381 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma18g03090 Gm18 2033310 2037748 PF09279 Phosphoinositide-specific phospholipase C, efhand-like Glyma18g03100 Gm18 2042100 2047611 PF09279 Phosphoinositide-specific phospholipase C, efhand-like Glyma18g03110 Gm18 2048740 2053082 PF09279 Phosphoinositide-specific phospholipase C, efhand-like Glyma18g03120 Gm18 2059860 2062743 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Glyma18g03130 Gm18 2063294 2063572 PF07011 Protein of unknown function (DUF1313) Glyma18g03140 Gm18 2067226 2069109 PF05916 GINS complex subunit Sld5 Glyma18g03160 Gm18 2074658 2079656 PF00657 GDSL-like Lipase/Acylhydrolase Glyma18g03170 Gm18 2089595 2091689 Glyma18g03180 Gm18 2092913 2099336 PF03109 ABC1 family Glyma18g03190 Gm18 2111978 2112786 Glyma18g03200 Gm18 2117710 2122839 Glyma18g03210 Gm18 2124257 2128455 Glyma18g03220 Gm18 2142266 2145112 PF00504 Chlorophyll A-B binding protein Glyma18g03230 Gm18 2148297 2151874 PF03226 Yippee putative zinc-binding protein Glyma18g03240 Gm18 2154306 2159392 PF04376 Arginine-tRNA-protein transferase, N terminus Glyma18g03250 Gm18 2163310 2168164 Glyma18g03260 Gm18 2169811 2174331 PF04715 Anthranilate synthase component I, N terminal region Glyma18g03270 Gm18 2179065 2183267 PF04715 Anthranilate synthase component I, N terminal region Glyma18g03280 Gm18 2188808 2193682 PF01490 Transmembrane amino acid transporter protein Glyma18g03290 Gm18 2205322 2207927 Glyma18g03300 Gm18 2209232 2211983 PF00466 Ribosomal protein L10 Glyma18g03310 Gm18 2221069 2222733 PF07231 Hs1pro-1 N-terminus Glyma18g03320 Gm18 2221380 2222474 Glyma18g03330 Gm18 2228741 2229353 PF00230 Major intrinsic protein Glyma18g03340 Gm18 2232316 2235875 PF01398 Mov34/MPN/PAD-1 family Glyma18g03350 Gm18 2251023 2251658 PF00046 Homeobox domain Glyma18g03360 Gm18 2253963 2257753 PF01398 Mov34/MPN/PAD-1 family Glyma18g03380 Gm18 2269841 2271344 PF02458 Transferase family Glyma18g03390 Gm18 2295932 2297360 PF00168 C2 domain Glyma18g03400 Gm18 2298891 2304627 PF00153 Mitochondrial carrier protein Glyma18g03420 Gm18 2312654 2316216 Glyma18g03430 Gm18 2320385 2321891 PF00249 Myb -like DNA-binding domain Glyma18g03440 Gm18 2327115 2330400 PF00316 Fructose-1-6-bisphosphatase Glyma18g03450 Gm18 2333480 2336020 Glyma18g03460 Gm18 2336131 2339697 130

Glyma18g03470 Gm18 2346116 2349454 PF00759 Glycosyl hydrolase family 9 Glyma18g03480 Gm18 2351580 2355609 PF04051 Transport protein particle (TRAPP) component

Glyma18g03490 Gm18 2361700 2364982 PF00412 LIM domain Glyma18g03500 Gm18 2367519 2370746 Glyma18g03510 Gm18 2372768 2376124 PF00892 EamA -like transporter family Glyma18g03520 Gm18 2383364 2384329 PF08571 Yos1-like Glyma18g03530 Gm18 2385109 2388233 PF01490 Transmembrane amino acid transporter protein Glyma18g03540 Gm18 2398810 2399849 PF00139 Legume lectin domain Glyma18g03550 Gm18 2426091 2430254 PF04788 Protein of unknown function (DUF620) Glyma18g03560 Gm18 2431010 2433299 Glyma18g03570 Gm18 2434512 2438305 Glyma18g03580 Gm18 2449042 2450890 Glyma18g03600 Gm18 2476179 2483022 PF09778 Guanylyl cyclase Glyma18g03610 Gm18 2491641 2494151 PF03759 PRONE (Plant-specific Rop nucleotide exchanger) Glyma18g03620 Gm18 2495562 2496547 Glyma18g03630 Gm18 2497662 2498586 Glyma18g03640 Gm18 2502550 2503444 Glyma18g03660 Gm18 2508703 2509527 Glyma18g03670 Gm18 2513584 2514395 Glyma18g03680 Gm18 2517863 2518681 Glyma18g03690 Gm18 2522634 2523458 Glyma18g03700 Gm18 2525086 2525975 Glyma18g03710 Gm18 2530246 2531741 Glyma18g03720 Gm18 2535392 2536193 Glyma18g03730 Gm18 2539426 2540076 PF00234 Protease inhibitor/seed storage/LTP family Glyma18g03740 Gm18 2541253 2544493 Glyma18g03750 Gm18 2564190 2568568 PF05922 Peptidase inhibitor I9 Glyma18g03760 Gm18 2576914 2578781 PF00071 Ras family Glyma18g03770 Gm18 2583841 2586842 PF07690 Major Facilitator Superfamily Glyma18g03780 Gm18 2590159 2593622 PF07690 Major Facilitator Superfamily Glyma18g03790 Gm18 2604562 2608597 PF07690 Major Facilitator Superfamily Glyma18g03800 Gm18 2610449 2613671 PF07690 Major Facilitator Superfamily Glyma18g03810 Gm18 2614764 2619141 PF02809 Ubiquitin interaction motif Glyma18g03820 Gm18 2625617 2633165 Glyma18g03830 Gm18 2637348 2642823 PF00696 Amino acid kinase family Glyma18g03840 Gm18 2644821 2646707 PF00483 Nucleotidyl transferase Glyma18g03850 Gm18 2656345 2657084 PF02298 Plastocyanin-like domain Glyma18g03860 Gm18 2658042 2663821 PF00069 Protein kinase domain Glyma18g03870 Gm18 2667296 2672893 PF00415 Regulator of chromosome condensation (RCC1) repeat Glyma18g03880 Gm18 2680209 2685322 PF00917 MATH domain Glyma18g03890 Gm18 2691375 2700388 PF03141 Putative methyltransferase 131

Glyma18g03900 Gm18 2702550 2706321 PF01909 Nucleotidyltransferase domain Glyma18g03930 Gm18 2718083 2719598 PF00481 Protein phosphatase 2C

Glyma18g03950 Gm18 2734693 2737597 PF00106 short chain dehydrogenase Glyma18g03960 Gm18 2740909 2742441 PF00106 short chain dehydrogenase Glyma18g03970 Gm18 2744624 2747493 PF00805 Pentapeptide repeats (8 copies) Glyma18g03980 Gm18 2748303 2754430 PF07800 Protein of unknown function (DUF1644) Glyma18g03990 Gm18 2763111 2768287 PF01369 Sec7 domain Glyma18g04000 Gm18 2771730 2777392 PF01369 Sec7 domain Glyma18g04020 Gm18 2779242 2784197 PF04646 Protein of unknown function, DUF604 Glyma18g04030 Gm18 2797921 2798815 PF12171 Zinc-finger double-stranded RNA-binding Glyma18g04040 Gm18 2803084 2806278 Glyma18g04060 Gm18 2820745 2822484 PF03479 Domain of unknown function (DUF296) Glyma18g04070 Gm18 2830130 2834789 PF00586 AIR synthase related protein, N-terminal domain Glyma18g04080 Gm18 2845068 2849306 PF00004 ATPase family associated with various cellular activities (AAA) Glyma18g04090 Gm18 2852648 2854686 PF00139 Legume lectin domain Glyma18g04110 Gm18 2861610 2862078 PF00314 Thaumatin family Glyma18g04120 Gm18 2863619 2863885 PF00249 Myb-like DNA-binding domain Glyma18g04130 Gm18 2865394 2872396 PF00888 Cullin family Glyma18g04140 Gm18 2885805 2887177 PF06547 Protein of unknown function (DUF1117) Glyma18g04150 Gm18 2893900 2894789 Glyma18g04160 Gm18 2897155 2901795 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma18g04170 Gm18 2902619 2905960 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Glyma18g04180 Gm18 2919429 2920484 PF08137 DVL family Glyma18g04220 Gm18 2989372 2995029 PF01453 D-mannose binding lectin Glyma18g04230 Gm18 2999705 3002940 Glyma18g04240 Gm18 3004668 3009647 PF00400 WD domain, G-beta repeat Glyma18g04250 Gm18 3011636 3015091 Glyma18g04260 Gm18 3038821 3040502 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel Glyma18g04290 Gm18 3050785 3052955 PF03469 XH domain Glyma18g04320 Gm18 3075111 3080024 PF03470 XS zinc finger domain Glyma18g04330 Gm18 3083898 3085943 PF00168 C2 domain Glyma18g04340 Gm18 3089114 3092903 PF00069 Protein kinase domain Glyma18g04350 Gm18 3099568 3100656 Glyma18g04360 Gm18 3100607 3107592 Glyma18g04370 Gm18 3114928 3118485 Glyma18g04380 Gm18 3118545 3121670 PF05770 Inositol 1, 3, 4-trisphosphate 5/6-kinase Glyma18g04390 Gm18 3128843 3130524 Glyma18g04400 Gm18 3130856 3147692 PF00595 PDZ domain (Also known as DHR or GLGF) Glyma18g04410 Gm18 3149111 3153171 PF00514 Armadillo/beta-catenin-like repeat Glyma18g04420 Gm18 3172773 3174310 PF00010 Helix-loop-helix DNA-binding domain Glyma18g04430 Gm18 3180678 3182223 PF01535 PPR repeat 132

Glyma18g04440 Gm18 3194805 3197815 PF00069 Protein kinase domain Glyma18g04450 Gm18 3206856 3207682 PF00036 EF hand

Glyma18g04460 Gm18 3211487 3211832 PF03874 RNA polymerase Rpb4 Glyma18g04470 Gm18 3220784 3223369 PF00168 C2 domain Glyma18g04480 Gm18 3225000 3230879 Glyma18g04490 Gm18 3239297 3240920 Glyma18g04500 Gm18 3267636 3269865 PF12041 Transcriptional regulator DELLA protein N terminal Glyma18g04510 Gm18 3299872 3305337 PF02798 Glutathione S-transferase, N-terminal domain Glyma18g04520 Gm18 3307161 3308407 PF00538 linker histone H1 and H5 family Glyma18g04530 Gm18 3312006 3316764 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Glyma18g04540 Gm18 3317467 3321516 PF03893 Lipase 3 N-terminal region Glyma18g04560 Gm18 3333728 3337575 PF00332 Glycosyl hydrolases family 17 Glyma18g04580 Gm18 3351330 3353862 PF00249 Myb-like DNA-binding domain Glyma18g04590 Gm18 3374412 3375437 Glyma18g04610 Gm18 3384223 3386757 PF01657 Domain of unknown function DUF26 Glyma18g04620 Gm18 3395135 3397229 PF00293 NUDIX domain Glyma18g04640 Gm18 3416078 3423453 Glyma18g04660 Gm18 3444348 3448708 PF03951 Glutamine synthetase, beta-Grasp domain Glyma18g04680 Gm18 3456965 3462247 PF07719 Tetratricopeptide repeat Glyma18g04690 Gm18 3465170 3468988 Glyma18g04700 Gm18 3470538 3470901 Glyma18g04710 Gm18 3483812 3485269 Glyma18g04720 Gm18 3503227 3503902 PF04828 Glutathione -dependent formaldehyde-activating enzyme Glyma18g04730 Gm18 3507638 3513294 PF00111 2Fe-2S iron-sulfur cluster binding domain Glyma18g04740 Gm18 3515712 3516692 PF04573 Signal peptidase subunit Glyma18g04750 Gm18 3517412 3523918 PF05450 Nicastrin Glyma18g04760 Gm18 3527737 3528572 PF00319 SRF-type transcription factor (DNA-binding and dimerisation domain) Glyma18g04770 Gm18 3529876 3531491 PF04564 U-box domain Glyma18g04780 Gm18 3534342 3537874 PF08263 Leucine rich repeat N-terminal domain Glyma18g04800 Gm18 3542083 3543816 Glyma18g04810 Gm18 3563303 3566352 PF00096 Zinc finger, C2H2 type Glyma18g04820 Gm18 3570450 3572642 Glyma18g04830 Gm18 3576123 3577886 PF01408 Oxidoreductase family, NAD-binding Glyma18g04850 Gm18 3584934 3586448 PF04981 NMD3 family Glyma18g04870 Gm18 3594062 3597788 Glyma18g04880 Gm18 3602940 3608903 PF00249 Myb -like DNA-binding domain Glyma18g04890 Gm18 3642844 3647145 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 Glyma18g04900 Gm18 3654200 3657227 PF06886 Targeting protein for Xklp2 (TPX2) Glyma18g04910 Gm18 3661885 3670656 PF09202 Rio2, N-terminal Glyma18g04930 Gm18 3689701 3691734 PF00139 Legume lectin domain Glyma18g04940 Gm18 3694023 3704878 PF00282 Pyridoxal-dependent decarboxylase conserved domain 133

Glyma18g04960 Gm18 3712792 3714911 PF02798 Glutathione S-transferase, N-terminal domain Glyma18g04990 Gm18 3718552 3722900 PF00862 Sucrose synthase

Glyma18g05010 Gm18 3730541 3737106 Glyma18g05020 Gm18 3745623 3749921 PF02365 No apical meristem (NAM) protein Glyma18g05030 Gm18 3756206 3761988 PF00169 PH domain Glyma18g05040 Gm18 3787548 3790052 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel Glyma18g05050 Gm18 3792011 3795007 PF00249 Myb-like DNA-binding domain Glyma18g05060 Gm18 3798444 3801794 PF00023 Ankyrin repeat Glyma18g05070 Gm18 3813105 3815020 Glyma18g05080 Gm18 3818964 3823111 PF00557 Metallopeptidase family M24 Glyma18g05090 Gm18 3826658 3829432 PF00557 Metallopeptidase family M24 Glyma18g05100 Gm18 3831982 3834738 Glyma18g05110 Gm18 3859765 3862476 PF00501 AMP -binding enzyme Glyma18g05120 Gm18 3867982 3873222 PF08477 Miro-like protein Glyma18g05140 Gm18 3876938 3882463 PF01593 Flavin containing amine oxidoreductase Glyma18g05160 Gm18 3895733 3896906 Glyma18g05170 Gm18 3906143 3910329 PF04535 Domain of unknown function (DUF588) Glyma18g05180 Gm18 3914233 3915513 PF08583 Cytochrome c oxidase biogenesis protein Cmc1 like Glyma18g05200 Gm18 3924872 3936024 Glyma18g05210 Gm18 3937806 3942392 PF08216 Eukaryotic domain of unknown function (DUF1716) Glyma18g05220 Gm18 3948867 3952563 PF01965 DJ-1/PfpI family Glyma18g05230 Gm18 3954583 3956720 PF01965 DJ-1/PfpI family Glyma18g05240 Gm18 3960185 3964969 PF01657 Domain of unknown function DUF26 Glyma18g05250 Gm18 3973357 3976025 PF01657 Domain of unknown function DUF26 Glyma18g05260 Gm18 3981981 3986391 PF01657 Domain of unknown function DUF26 Glyma18g05300 Gm18 4039285 4041748 PF01657 Domain of unknown function DUF26 Glyma18g05310 Gm18 4052605 4055281 Glyma18g05320 Gm18 4058554 4060202 PF05757 Oxygen evolving enhancer protein 3 (PsbQ) Glyma18g05330 Gm18 4067009 4075235 PF02362 B3 DNA binding domain Glyma18g05340 Gm18 4077840 4078852 Glyma18g05350 Gm18 4099836 4105252 PF04970 NC domain Glyma18g05370 Gm18 4107099 4108161 PF04970 NC domain Glyma18g05380 Gm18 4108582 4110103 Glyma18g05390 Gm18 4111767 4114140 PF07466 Protein of unknown function (DUF1517) Glyma18g05410 Gm18 4120527 4123143 PF01535 PPR repeat Glyma18g05430 Gm18 4128548 4129284 Glyma18g05450 Gm18 4134737 4135825 PF03168 Late embryogenesis abundant protein Glyma18g05460 Gm18 4139032 4142380 PF00892 EamA-like transporter family Glyma18g05470 Gm18 4143551 4145567 Glyma18g05480 Gm18 4147633 4154884 Glyma18g05490 Gm18 4157357 4159533 PF03171 2OG -Fe(II) oxygenase superfamily 134

Glyma18g05510 Gm18 4165752 4167313 Glyma18g05520 Gm18 4172219 4177625

Glyma18g05530 Gm18 4181350 4184122 PF04678 Protein of unknown function, DUF607 Glyma18g05540 Gm18 4184800 4186515 Glyma18g05570 Gm18 4197685 4201686 PF00270 DEAD/DEAH box helicase Glyma18g05580 Gm18 4205137 4207594 PF01230 HIT domain Glyma18g05590 Gm18 4208554 4211704 PF01230 HIT domain Glyma18g05600 Gm18 4213760 4216079 PF01196 Ribosomal protein L17 Glyma18g05610 Gm18 4219205 4221695 PF00012 Hsp70 protein Glyma18g05620 Gm18 4222419 4224538 PF10674 Protein of unknown function (DUF2488) Glyma18g05630 Gm18 4232575 4235778 PF00067 Cytochrome P450 Glyma18g05640 Gm18 4239823 4241302 PF11909 NADH-quinone oxidoreductase cyanobacterial subunit N Glyma18g05660 Gm18 4304360 4310313 Glyma18g05670 Gm18 4313020 4314608 PF06697 Protein of unknown function (DUF1191) Glyma18g05680 Gm18 4323561 4327846 Glyma18g05690 Gm18 4334878 4338291 PF01545 Cation efflux family Glyma18g05700 Gm18 4342620 4344554 PF00252 Ribosomal protein L16p/L10e Glyma18g05710 Gm18 4346179 4355945 PF08263 Leucine rich repeat N-terminal domain Glyma18g05720 Gm18 4380151 4382222 PF00651 BTB/POZ domain Glyma18g05730 Gm18 4386843 4391382 PF07728 AAA domain (dynein-related subfamily) Glyma18g05740 Gm18 4403113 4407451 PF08263 Leucine rich repeat N-terminal domain Glyma18g05750 Gm18 4408998 4409596 Glyma18g05770 Gm18 4413028 4417804 PF00179 Ubiquitin -conjugating enzyme Glyma18g05780 Gm18 4420789 4421210 Glyma18g05790 Gm18 4436144 4437678 PF07765 KIP1 -like protein Glyma18g05800 Gm18 4440831 4446614 PF00271 Helicase conserved C-terminal domain Glyma18g05820 Gm18 4454590 4455765 PF02798 Glutathione S-transferase, N-terminal domain Glyma18g05830 Gm18 4459609 4468849 Glyma18g05840 Gm18 4483773 4491276 PF02362 B3 DNA binding domain Glyma18g05860 Gm18 4496734 4498487 PF00067 Cytochrome P450 Glyma18g05870 Gm18 4506143 4508515 PF00067 Cytochrome P450 Glyma18g05880 Gm18 4525398 4528056 PF00170 bZIP transcription factor Glyma18g05890 Gm18 4533735 4534192 PF00234 Protease inhibitor/seed storage/LTP family Glyma18g05900 Gm18 4542028 4547188 PF00249 Myb-like DNA-binding domain Glyma18g05920 Gm18 4552725 4553185 PF00319 SRF-type transcription factor (DNA-binding and dimerisation domain) Glyma18g05930 Gm18 4567243 4567844 PF00319 SRF-type transcription factor (DNA-binding and dimerisation domain) Glyma18g05950 Gm18 4573932 4578259 Glyma18g05960 Gm18 4581123 4581599 PF00319 SRF -type transcription factor (DNA-binding and dimerisation domain) Glyma18g05980 Gm18 4594330 4595136 PF00319 SRF-type transcription factor (DNA-binding and dimerisation domain) Glyma18g05990 Gm18 4602779 4604263 PF00319 SRF-type transcription factor (DNA-binding and dimerisation domain) Glyma18g06000 Gm18 4607133 4607739 PF00319 SRF-type transcription factor (DNA-binding and dimerisation domain) 135

Glyma18g06010 Gm18 4615965 4617414 PF00319 SRF-type transcription factor (DNA-binding and dimerisation domain) Glyma18g06030 Gm18 4626225 4637236 PF00675 Insulinase (Peptidase family M16)

Glyma18g06040 Gm18 4639020 4639849 PF00319 SRF-type transcription factor (DNA-binding and dimerisation domain) Glyma18g06050 Gm18 4650917 4653715 PF04099 Sybindin-like family Glyma18g06060 Gm18 4663019 4664491 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel Glyma18g06080 Gm18 4677184 4680538 Glyma18g06090 Gm18 4689805 4690934 PF04844 Protein of unknown function, DUF623 Glyma18g06100 Gm18 4695172 4695646 Glyma18g06110 Gm18 4697007 4699592 PF03540 Transcription initiation factor TFIID 23-30kDa subunit Glyma18g06120 Gm18 4709416 4710517 Glyma18g06130 Gm18 4729011 4730894 PF00069 Protein kinase domain Glyma18g06140 Gm18 4729820 4730843 Glyma18g06150 Gm18 4733036 4742566 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Glyma18g06160 Gm18 4744886 4746899 Glyma18g06170 Gm18 4748325 4750945 PF01541 GIY -YIG catalytic domain Glyma18g06180 Gm18 4753666 4756427 PF00069 Protein kinase domain Glyma18g06190 Gm18 4763278 4769322 PF01148 Cytidylyltransferase family Glyma18g06200 Gm18 4774488 4781650 PF04564 U-box domain Glyma18g06210 Gm18 4784269 4788248 PF00141 Peroxidase Glyma18g06220 Gm18 4808002 4811827 PF00141 Peroxidase Glyma18g06230 Gm18 4815244 4817920 PF00141 Peroxidase Glyma18g06240 Gm18 4823860 4825146 PF06813 Nodulin-like Glyma18g06250 Gm18 4825091 4827712 PF00141 Peroxidase Glyma18g06260 Gm18 4837021 4843674 Glyma18g06270 Gm18 4848578 4850354 Glyma18g06280 Gm18 4876234 4878302 PF06813 Nodulin -like Glyma18g06290 Gm18 4886320 4888343 PF01535 PPR repeat Glyma18g06300 Gm18 4897609 4901160 Glyma18g06310 Gm18 4903556 4905127 PF02458 Transferase family Glyma18g06320 Gm18 4906160 4912790 PF10236 Mitochondrial ribosomal death-associated protein 3 Glyma18g06340 Gm18 4926668 4927620 PF07107 Wound-induced protein WI12 Glyma18g06350 Gm18 4928345 4928845 PF07107 Wound-induced protein WI12 Glyma18g06360 Gm18 4935709 4938000 PF03106 WRKY DNA -binding domain Glyma18g06390 Gm18 4952019 4953483 Glyma18g06400 Gm18 4954909 4957536 PF00999 Sodium/hydrogen exchanger family Glyma18g06410 Gm18 4962012 4965905 PF00999 Sodium/hydrogen exchanger family Glyma18g06420 Gm18 4971793 4972847 Glyma18g06430 Gm18 5003287 5014643 Glyma18g06450 Gm18 5028074 5030673 PF07732 Multicopper oxidase Glyma18g06460 Gm18 5032117 5033527 PF04438 HIT zinc finger Glyma18g06470 Gm18 5036387 5039529 PF00999 Sodium/hydrogen exchanger family 136

Glyma18g06480 Gm18 5062138 5065729 Glyma18g06490 Gm18 5066330 5066763

Glyma18g06500 Gm18 5067527 5071048 Glyma18g06510 Gm18 5074869 5079532 PF01370 NAD dependent epimerase/dehydratase family Glyma18g06530 Gm18 5095955 5096870 PF03195 Protein of unknown function DUF260 Glyma18g06540 Gm18 5107045 5108258 Glyma18g06560 Gm18 5112681 5115923 PF00641 Zn -finger in Ran binding protein and others Glyma18g06570 Gm18 5117376 5120408 PF00332 Glycosyl hydrolases family 17 Glyma18g06580 Gm18 5123814 5125167 PF01569 PAP2 superfamily Glyma18g06590 Gm18 5147602 5148694 PF04852 Protein of unknown function (DUF640) Glyma18g06600 Gm18 5170161 5183449 Glyma18g06610 Gm18 5184560 5188769 PF07714 Protein tyrosine kinase Glyma18g06620 Gm18 5195128 5201219 PF00899 ThiF family Glyma18g06630 Gm18 5204976 5208717 PF00240 Ubiquitin family Glyma18g06640 Gm18 5215742 5219862 PF00462 Glutaredoxin Glyma18g06650 Gm18 5249219 5252670 PF01490 Transmembrane amino acid transporter protein Glyma18g06660 Gm18 5253147 5254283 Glyma18g06670 Gm18 5269680 5273123 PF00560 Leucine Rich Repeat Glyma18g06680 Gm18 5273353 5277297 PF07719 Tetratricopeptide repeat Glyma18g06690 Gm18 5285407 5288722 Glyma18g06710 Gm18 5291967 5294907 Glyma18g06720 Gm18 5316371 5322726 PF08209 Sgf11 (transcriptional regulation protein) Glyma18g06730 Gm18 5348879 5351782 PF00583 Acetyltransferase (GNAT) family Glyma18g06740 Gm18 5400903 5403063 PF02535 ZIP Zinc transporter Glyma18g06760 Gm18 5425155 5426037 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma18g06770 Gm18 5430702 5442725 PF01591 6-phosphofructo-2-kinase Glyma18g06780 Gm18 5444919 5447748 Glyma18g06790 Gm18 5455366 5458134 PF02705 K+ potassium transporter Glyma18g06800 Gm18 5460747 5461817 PF00069 Protein kinase domain Glyma18g06810 Gm18 5472561 5474659 PF00481 Protein phosphatase 2C Glyma18g06840 Gm18 5512637 5517736 PF00310 Glutamine amidotransferases class-II Glyma18g06850 Gm18 5523357 5527475 PF03005 Arabidopsis proteins of unknown function Glyma18g06870 Gm18 5536833 5547935 PF03171 2OG-Fe(II) oxygenase superfamily Glyma18g06890 Gm18 5564157 5566030 PF03660 PHF5-like protein Glyma18g06910 Gm18 5572723 5574233 Glyma18g06920 Gm18 5575299 5579479 PF07992 Pyridine nucleotide-disulphide oxidoreductase Glyma18g06930 Gm18 5585533 5589315 PF01419 Jacalin-like lectin domain Glyma18g06940 Gm18 5595833 5601409 PF04564 U-box domain Glyma18g06950 Gm18 5619528 5622303 PF11960 Domain of unknown function (DUF3474) Glyma18g06960 Gm18 5643832 5645446 Glyma18g06980 Gm18 5648054 5650346 PF00023 Ankyrin repeat 137

Glyma18g06990 Gm18 5654218 5662272 Glyma18g07000 Gm18 5697689 5700127 PF00069 Protein kinase domain

Glyma18g07010 Gm18 5703344 5707074 PF05686 Arabidopsis thaliana protein of unknown function (DUF821) Glyma18g07030 Gm18 5730116 5732839 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Glyma18g07040 Gm18 5735482 5741628 PF08590 Domain of unknown function (DUF1771) Glyma18g07050 Gm18 5745056 5747234 PF04969 CS domain Glyma18g07060 Gm18 5753555 5758210 PF01699 Sodium/calcium exchanger protein Glyma18g07070 Gm18 5761823 5762956 Glyma18g07080 Gm18 5769337 5778635 PF00005 ABC transporter Glyma18g07090 Gm18 5801894 5804793 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma18g07100 Gm18 5808967 5809478 Glyma18g07110 Gm18 5815193 5815752 Glyma18g07120 Gm18 5816674 5817988 Glyma18g07130 Gm18 5821186 5824659 PF04185 Phosphoesterase family Glyma18g07140 Gm18 5826337 5829689 PF07714 Protein tyrosine kinase Glyma18g07160 Gm18 5844774 5845067 PF00125 Core histone H2A/H2B/H3/H4 Glyma18g07170 Gm18 5850954 5852440 PF01485 IBR domain Glyma18g07180 Gm18 5855361 5856323 PF01485 IBR domain Glyma18g07190 Gm18 5865474 5867064 PF05340 Protein of unknown function (DUF740) Glyma18g07200 Gm18 5867717 5868771 Glyma18g07220 Gm18 5872747 5876585 PF07690 Major Facilitator Superfamily Glyma18g07240 Gm18 5888501 5892669 PF07732 Multicopper oxidase Glyma18g07250 Gm18 5910579 5911964 PF00249 Myb-like DNA-binding domain Glyma18g07260 Gm18 5924287 5931042 PF00933 Glycosyl hydrolase family 3 N terminal domain Glyma18g07270 Gm18 5942719 5946022 Glyma18g07280 Gm18 5949631 5956893 PF06480 FtsH Extracellular Glyma18g07290 Gm18 5972253 5976832 PF01964 ThiC family Glyma18g07310 Gm18 5991370 5992131 PF11493 Thylakoid soluble phosphoprotein TSP9 Glyma18g07320 Gm18 6004554 6012780 PF07690 Major Facilitator Superfamily Glyma18g07330 Gm18 6030466 6031559 PF00096 Zinc finger, C2H2 type Glyma18g07340 Gm18 6037956 6042031 Glyma18g07360 Gm18 6060310 6062427 PF00249 Myb -like DNA-binding domain Glyma18g07370 Gm18 6069386 6072956 PF00170 bZIP transcription factor Glyma18g07380 Gm18 6085747 6088770 Glyma18g07430 Gm18 6127017 6128211 PF05617 Protein of unknown function (DUF784) Glyma18g07440 Gm18 6133360 6134892 Glyma18g07460 Gm18 6150111 6164567 PF00626 Gelsolin repeat Glyma18g07480 Gm18 6182841 6190643 PF00343 Carbohydrate phosphorylase Glyma18g07500 Gm18 6202249 6206133 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Glyma18g07510 Gm18 6208576 6223756 PF00270 DEAD/DEAH box helicase Glyma18g07520 Gm18 6231309 6233208 138

Glyma18g07530 Gm18 6236132 6238656 PF04859 Plant protein of unknown function (DUF641) Glyma18g07540 Gm18 6239208 6243863 PF00153 Mitochondrial carrier protein

Glyma18g07550 Gm18 6245402 6247410 PF00705 Proliferating cell nuclear antigen, N-terminal domain Glyma18g07560 Gm18 6247869 6251541 PF00892 EamA-like transporter family Glyma18g07610 Gm18 6325264 6325980 Glyma18g07620 Gm18 6329643 6337214 Glyma18g07640 Gm18 6340195 6340890 Glyma18g07660 Gm18 6342672 6350237 Glyma18g07680 Gm18 6393908 6399357 PF04734 Neutral/alkaline non-lysosomal ceramidase Glyma18g07690 Gm18 6417628 6420828 PF04734 Neutral/alkaline non-lysosomal ceramidase Glyma18g07700 Gm18 6456911 6461592 PF04734 Neutral/alkaline non-lysosomal ceramidase Glyma18g07710 Gm18 6472276 6472803 PF00072 Response regulator receiver domain Glyma18g07770 Gm18 6531199 6532155 Glyma18g07800 Gm18 6549552 6550050 Glyma18g07830 Gm18 6563381 6565740 PF06068 TIP49 C-terminus Glyma18g07840 Gm18 6571282 6576797 PF00514 Armadillo/beta-catenin-like repeat Glyma18g07850 Gm18 6579919 6583387 PF02341 RbcX protein Glyma18g07860 Gm18 6588196 6592288 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Glyma18g07870 Gm18 6603938 6605561 Glyma18g07880 Gm18 6628940 6632955 PF04483 Protein of unknown function (DUF565) Glyma18g07890 Gm18 6637279 6641133 PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B Glyma18g07900 Gm18 6642540 6646468 Glyma18g07920 Gm18 6662532 6666556 PF00400 WD domain, G-beta repeat Glyma18g07930 Gm18 6667237 6669020 Glyma18g07950 Gm18 6685501 6702322 PF02985 HEAT repeat Glyma18g07960 Gm18 6702539 6703699 PF00249 Myb-like DNA-binding domain Glyma18g07970 Gm18 6704987 6708831 PF01490 Transmembrane amino acid transporter protein Glyma18g07980 Gm18 6720276 6724189 PF01490 Transmembrane amino acid transporter protein Glyma18g08000 Gm18 6740238 6743507 PF01490 Transmembrane amino acid transporter protein Glyma18g08030 Gm18 6771828 6777546 PF01699 Sodium/calcium exchanger protein Glyma18g08040 Gm18 6794041 6794777 PF00226 DnaJ domain Glyma18g08050 Gm18 6800166 6807943 PF00400 WD domain, G-beta repeat Glyma18g08070 Gm18 6814890 6824010 PF11976 Ubiquitin-2 like Rad60 SUMO-like Glyma18g08080 Gm18 6828755 6832111 PF00013 KH domain Glyma18g08100 Gm18 6833646 6835447 PF00013 KH domain Glyma18g08110 Gm18 6838652 6843943 PF05922 Peptidase inhibitor I9 Glyma18g08140 Gm18 6851581 6853770 PF00651 BTB/POZ domain Glyma18g08150 Gm18 6870856 6873821 PF10354 Domain of unknown function (DUF2431) Glyma18g08160 Gm18 6877204 6877988 PF03168 Late embryogenesis abundant protein Glyma18g08180 Gm18 6886755 6894508 PF00485 Phosphoribulokinase / Uridine kinase family Glyma18g08190 Gm18 6969122 6972881 PF08263 Leucine rich repeat N-terminal domain 139

Glyma18g08200 Gm18 6988897 6995478 PF04178 Got1/Sft2-like family Glyma18g08210 Gm18 6999093 7003100 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase

Glyma18g08220 Gm18 7005784 7008858 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Glyma18g08230 Gm18 7009933 7014715 PF00036 EF hand Glyma18g08240 Gm18 7023868 7027811 PF00397 WW domain Glyma18g08250 Gm18 7033380 7037485 Glyma18g08260 Gm18 7039348 7040109 Glyma18g08270 Gm18 7044189 7047188 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma18g08280 Gm18 7056540 7059587 Glyma18g08290 Gm18 7065312 7069529 PF00005 ABC transporter Glyma18g08300 Gm18 7074775 7078809 Glyma18g08310 Gm18 7083348 7089669 PF01189 NOL1/NOP2/sun family Glyma18g08350 Gm18 7105915 7110941 PF03765 CRAL/TRIO, N-terminus Glyma18g08360 Gm18 7121492 7127534 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Glyma18g08370 Gm18 7131348 7133745 PF01956 Integral membrane protein DUF106 Glyma18g08380 Gm18 7136711 7140376 PF06999 Sucrase/ferredoxin-like Glyma18g08390 Gm18 7143056 7146648 PF05701 Plant protein of unknown function (DUF827) Glyma18g08400 Gm18 7169240 7170363 PF01105 emp24/gp25L/p24 family/GOLD Glyma18g08410 Gm18 7172243 7175580 PF05627 Cleavage site for pathogenic type III effector avirulence factor Avr Glyma18g08420 Gm18 7177600 7181459 PF00293 NUDIX domain Glyma18g08430 Gm18 7182604 7187330 PF04857 CAF1 family ribonuclease Glyma18g08440 Gm18 7189514 7192833 PF00139 Legume lectin domain Glyma18g08450 Gm18 7206073 7218600 PF02146 Sir2 family Glyma18g08470 Gm18 7238838 7239478 PF08137 DVL family Glyma18g08510 Gm18 7249141 7252910 PF00293 NUDIX domain Glyma18g08530 Gm18 7261627 7263637 PF02469 Fasciclin domain Glyma18g08540 Gm18 7272330 7273872 PF00917 MATH domain Glyma18g08550 Gm18 7275186 7278880 PF00501 AMP-binding enzyme Glyma18g08590 Gm18 7307020 7311324 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Glyma18g08610 Gm18 7327019 7331861 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Glyma18g08620 Gm18 7334635 7335187 PF00808 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Glyma18g08630 Gm18 7348704 7357178 PF08766 DEK C terminal domain Glyma18g08640 Gm18 7366307 7375260 PF08766 DEK C terminal domain Glyma18g08650 Gm18 7389719 7390555 Glyma18g08690 Gm18 7419485 7422570 PF00931 NB -ARC domain Glyma18g08700 Gm18 7434846 7437112 Glyma18g08720 Gm18 7461602 7462660 Glyma18g08740 Gm18 7482464 7484654 PF03151 Triose -phosphate Transporter family Glyma18g08750 Gm18 7502412 7502661 PF00203 Ribosomal protein S19 Glyma18g08760 Gm18 7515288 7518066 PF02535 ZIP Zinc transporter Glyma18g08770 Gm18 7520883 7524711 PF01245 Ribosomal protein L19 140

Glyma18g08780 Gm18 7530370 7533051 PF08325 WLM domain Glyma18g08790 Gm18 7533838 7535135

Glyma18g08850 Gm18 7603472 7610281 PF01426 BAH domain Glyma18g08860 Gm18 7611602 7612788 PF04526 Protein of unknown function (DUF568) Glyma18g08870 Gm18 7614207 7620726 PF00664 ABC transporter transmembrane region Glyma18g08900 Gm18 7631313 7635481 PF00338 Ribosomal protein S10p/S20e Glyma18g08910 Gm18 7642601 7644174 PF06426 Serine acetyltransferase, N-terminal Glyma18g08930 Gm18 7662218 7664677 PF00067 Cytochrome P450 Glyma18g08940 Gm18 7677712 7680602 PF00067 Cytochrome P450 Glyma18g08950 Gm18 7686955 7690536 PF00067 Cytochrome P450 Glyma18g08960 Gm18 7705852 7709650 PF00067 Cytochrome P450 Glyma18g08980 Gm18 7720480 7722005 PF03004 Plant transposase (Ptta/En/Spm family) Glyma18g09000 Gm18 7745351 7751386 PF00664 ABC transporter transmembrane region Glyma18g09020 Gm18 7781549 7784719 PF00642 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Glyma18g09030 Gm18 7806750 7808903 PF03514 GRAS family transcription factor Glyma18g09040 Gm18 7810847 7815984 PF03106 WRKY DNA -binding domain Glyma18g09060 Gm18 7833850 7837859 PF07899 Frigida-like protein Glyma18g09070 Gm18 7846953 7848739 PF00069 Protein kinase domain Glyma18g09090 Gm18 7896309 7898946 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Glyma18g09100 Gm18 7910085 7915703 Glyma18g09110 Gm18 7916372 7918454 PF00168 C2 domain Glyma18g09120 Gm18 7938220 7943992 PF00225 Kinesin motor domain Glyma18g09130 Gm18 7951431 7954207 PF00931 NB-ARC domain Glyma18g09140 Gm18 7973113 7976023 PF00931 NB-ARC domain Glyma18g09170 Gm18 7994300 7997134 PF00931 NB-ARC domain Glyma18g09180 Gm18 8041284 8043980 PF00931 NB-ARC domain Glyma18g09220 Gm18 8097069 8100293 PF00931 NB-ARC domain Glyma18g09290 Gm18 8169570 8173170 PF00931 NB-ARC domain Glyma18g09340 Gm18 8222834 8226245 PF00931 NB-ARC domain Glyma18g09380 Gm18 8238065 8239816 PF08246 Cathepsin propeptide inhibitor domain (I29) Glyma18g09390 Gm18 8261038 8267778 PF00931 NB-ARC domain Glyma18g09410 Gm18 8279328 8282099 PF00931 NB-ARC domain Glyma18g09420 Gm18 8333124 8334041 PF03641 Possible lysine decarboxylase Glyma18g09430 Gm18 8336683 8339182 PF01201 Ribosomal protein S8e Glyma18g09450 Gm18 8348642 8353447 PF00023 Ankyrin repeat Glyma18g09460 Gm18 8361446 8362691 Glyma18g09480 Gm18 8374020 8378571 Glyma18g09490 Gm18 8379371 8386042 Glyma18g09500 Gm18 8389916 8395778 PF02678 Pirin Glyma18g09530 Gm18 8424448 8429865 PF03009 Glycerophosphoryl diester phosphodiesterase family Glyma18g09550 Gm18 8455463 8455826 PF00234 Protease inhibitor/seed storage/LTP family 141

Glyma18g09560 Gm18 8459522 8460979 Glyma18g09600 Gm18 8480044 8485370 PF01535 PPR repeat

Glyma18g09610 Gm18 8492280 8505492 PF12047 Cytosine specific DNA methyltransferase replication foci domain Glyma18g09620 Gm18 8507706 8508631 Glyma18g09630 Gm18 8512657 8515184 PF00931 NB -ARC domain Glyma18g09640 Gm18 8521299 8522946 Glyma18g09670 Gm18 8547335 8549821 PF00931 NB -ARC domain Glyma18g09710 Gm18 8579372 8585708 Glyma18g09720 Gm18 8614201 8616563 PF00931 NB -ARC domain Glyma18g09750 Gm18 8623635 8636624 PF00931 NB-ARC domain Glyma18g09760 Gm18 8641995 8643552 Glyma18g09770 Gm18 8646251 8647587 Glyma18g09780 Gm18 8647778 8651191 PF02466 Tim17/Tim22/Tim23 family Glyma18g09790 Gm18 8654054 8657289 PF00931 NB-ARC domain Glyma18g09800 Gm18 8671248 8673968 PF00931 NB-ARC domain Glyma18g09810 Gm18 8680123 8681512 Glyma18g09840 Gm18 8700730 8708936 PF00931 NB -ARC domain Glyma18g09880 Gm18 8733719 8736647 PF00931 NB-ARC domain Glyma18g09890 Gm18 8746748 8748362 Glyma18g09920 Gm18 8769115 8772961 PF00931 NB -ARC domain Glyma18g09930 Gm18 8779067 8780702 Glyma18g09940 Gm18 8783493 8786746 PF02466 Tim17/Tim22/Tim23 family Glyma18g09980 Gm18 8799061 8801928 PF00931 NB-ARC domain Glyma18g09990 Gm18 8810631 8812243 Glyma18g10010 Gm18 8821609 8822843 PF02466 Tim17/Tim22/Tim23 family Glyma18g10020 Gm18 8825754 8827216 PF05493 ATP synthase subunit H Glyma18g10030 Gm18 8828564 8831228 PF00091 Tubulin/FtsZ family, GTPase domain Glyma18g10040 Gm18 8833137 8838998 PF02969 TATA box binding protein associated factor (TAF) Glyma18g10060 Gm18 8845098 8849732 PF05739 SNARE domain Glyma18g10070 Gm18 8858615 8863798 PF01273 LBP / BPI / CETP family, N-terminal domain Glyma18g10080 Gm18 8886571 8890915 PF03492 SAM dependent carboxyl methyltransferase Glyma18g10090 Gm18 8899365 8903249 Glyma18g10110 Gm18 8922431 8925155 Glyma18g10120 Gm18 8926559 8930006 PF01025 GrpE Glyma18g10140 Gm18 8946604 8948186 PF02201 SWIB/MDM2 domain Glyma18g10150 Gm18 8959080 8969173 PF00036 EF hand Glyma18g10170 Gm18 8983539 8985304 PF00400 WD domain, G-beta repeat Glyma18g10180 Gm18 8986225 8992028 PF12056 Protein of unknown function (DUF3537) Glyma18g10200 Gm18 9012295 9014721 Glyma18g10210 Gm18 9028414 9034259 PF00642 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Glyma18g10220 Gm18 9049301 9051225 PF00109 Beta-ketoacyl synthase, N-terminal domain 142

Glyma18g10260 Gm18 9085343 9093143 PF01370 NAD dependent epimerase/dehydratase family Glyma18g10270 Gm18 9111558 9118022 PF01370 NAD dependent epimerase/dehydratase family

Glyma18g10290 Gm18 9132824 9134096 PF00847 AP2 domain Glyma18g10300 Gm18 9169958 9171388 Glyma18g10310 Gm18 9174865 9178115 PF00642 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Glyma18g10330 Gm18 9201202 9203210 PF03106 WRKY DNA -binding domain Glyma18g10340 Gm18 9217678 9218583 PF00400 WD domain, G-beta repeat Glyma18g10360 Gm18 9229936 9230700 PF04885 Stigma-specific protein, Stig1 Glyma18g10370 Gm18 9235950 9239512 PF01168 Alanine racemase, N-terminal domain Glyma18g10380 Gm18 9243050 9248810 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Glyma18g10400 Gm18 9263609 9271800 PF04078 Cell differentiation family, Rcd1-like Glyma18g10410 Gm18 9279343 9280299 Glyma18g10430 Gm18 9299191 9302810 Glyma18g10440 Gm18 9325148 9325431 PF04885 Stigma -specific protein, Stig1 Glyma18g10450 Gm18 9326613 9329973 PF01535 PPR repeat Glyma18g10460 Gm18 9335220 9349003 PF00117 Glutamine amidotransferase class-I Glyma18g10470 Gm18 9350896 9353666 PF00931 NB-ARC domain Glyma18g10490 Gm18 9363029 9366247 PF00931 NB-ARC domain Glyma18g10540 Gm18 9431055 9433580 PF00931 NB-ARC domain Glyma18g10550 Gm18 9437854 9441058 PF00931 NB-ARC domain Glyma18g10610 Gm18 9474156 9477668 PF00931 NB-ARC domain Glyma18g10640 Gm18 9513692 9515932 Glyma18g10650 Gm18 9516001 9517524 Glyma18g10670 Gm18 9526405 9528238 PF00931 NB -ARC domain Glyma18g10700 Gm18 9560568 9565654 Glyma18g10730 Gm18 9579761 9582032 PF00931 NB -ARC domain Glyma18g10750 Gm18 9607166 9611276 Glyma18g10760 Gm18 9611401 9612296 PF00011 Hsp20/alpha crystallin family Glyma18g10770 Gm18 9615883 9618056 PF01535 PPR repeat Glyma18g10820 Gm18 9666489 9669563 PF00657 GDSL-like Lipase/Acylhydrolase Glyma18g10830 Gm18 9681995 9684330 Glyma18g10850 Gm18 9694660 9700191 PF00439 Bromodomain Glyma18g10860 Gm18 9702945 9704706 Glyma18g10890 Gm18 9712056 9716022 PF00439 Bromodomain Glyma18g10910 Gm18 9731834 9732217 Glyma18g10920 Gm18 9778358 9780135 PF00249 Myb -like DNA-binding domain Glyma18g10930 Gm18 9787255 9788728 PF04520 Protein of unknown function, DUF584 Glyma18g10960 Gm18 9811433 9816493 PF05071 NADH ubiquinone oxidoreductase subunit NDUFA12 Glyma18g10990 Gm18 9827718 9831731 PF09177 Syntaxin 6, N-terminal Glyma18g11000 Gm18 9833555 9839550 Glyma18g11010 Gm18 9843467 9846907 PF01253 Translation initiation factor SUI1 143

Glyma18g11030 Gm18 9856625 9862623 PF00069 Protein kinase domain Glyma18g11050 Gm18 9897882 9899237 PF00097 Zinc finger, C3HC4 type (RING finger)

Glyma18g11070 Gm18 9920717 9921447 Glyma18g11080 Gm18 9935857 9950719 PF11707 Ribosome 60S biogenesis N-terminal Glyma18g11100 Gm18 9952214 9955374 PF01042 Endoribonuclease L-PSP Glyma18g11110 Gm18 9958506 9963530 PF01625 Peptide methionine sulfoxide reductase Glyma18g34090 Gm18 40117407 40118248 Glyma18g34110 Gm18 40128807 40129946 Glyma18g34130 Gm18 40146622 40147361 Glyma18g34160 Gm18 40158535 40159323 Glyma18g34180 Gm18 40191916 40192888 Glyma18g34200 Gm18 40233418 40234206 Glyma18g34220 Gm18 40272087 40273582 Glyma18g34290 Gm18 40370037 40370911 PF03874 RNA polymerase Rpb4 Glyma18g34350 Gm18 40406222 40406567 Glyma18g34490 Gm18 40501079 40502628 Glyma18g34550 Gm18 40574945 40575813 Glyma18g34610 Gm18 40648537 40648809 Glyma18g34690 Gm18 40717735 40718080 Glyma18g34710 Gm18 40738587 40738859 Glyma18g34750 Gm18 40778260 40778999 Glyma18g34780 Gm18 40791609 40793372 Glyma18g34800 Gm18 40814355 40816302 Glyma18g34830 Gm18 40839226 40839964 Glyma18g34910 Gm18 40891674 40893048 Glyma18g34950 Gm18 40943038 40943549 Glyma18g34990 Gm18 40972883 40973596 Glyma18g35170 Gm18 41242486 41243761 Glyma18g35220 Gm18 41366995 41370199 PF03171 2OG -Fe(II) oxygenase superfamily Glyma18g35300 Gm18 41432424 41433671 PF04419 4F5 protein family Glyma18g35320 Gm18 41438958 41440233 PF00646 F-box domain Glyma18g35330 Gm18 41460230 41461454 PF07723 Leucine Rich Repeat Glyma18g35360 Gm18 41487195 41488892 PF00646 F-box domain Glyma18g35370 Gm18 41559595 41567302 PF00646 F-box domain Glyma18g35390 Gm18 41630384 41635595 PF00810 ER lumen protein retaining receptor Glyma18g35400 Gm18 41669471 41673243 Glyma18g35410 Gm18 41686505 41688519 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma18g35450 Gm18 41747154 41750531 PF11976 Ubiquitin-2 like Rad60 SUMO-like Glyma18g35720 Gm18 41961257 41963401 PF00722 Glycosyl hydrolases family 16 Glyma18g35790 Gm18 42063107 42065088 PF02458 Transferase family Glyma18g35820 Gm18 42100637 42101028 144

Glyma18g35890 Gm18 42159051 42159495 PF07647 SAM domain (Sterile alpha motif) Glyma18g35940 Gm18 42206050 42213787 PF10510 Phosphatidylinositol-glycan biosynthesis class S protein

Glyma18g36000 Gm18 42306128 42311168 PF05627 Cleavage site for pathogenic type III effector avirulence factor Avr Glyma18g36050 Gm18 42326076 42326531 PF07911 Protein of unknown function (DUF1677) Glyma18g36060 Gm18 42365075 42366630 Glyma18g36130 Gm18 42460277 42466920 PF01643 Acyl -ACP thioesterase Glyma18g36150 Gm18 42485418 42490834 Glyma18g36160 Gm18 42503103 42508821 PF08285 Dolichol -phosphate mannosyltransferase subunit 3 (DPM3) Glyma18g36200 Gm18 42534214 42536033 PF00646 F-box domain Glyma18g36240 Gm18 42596667 42597677 PF00646 F-box domain Glyma18g36250 Gm18 42600117 42601873 PF00646 F-box domain Glyma18g36330 Gm18 42648070 42648857 Glyma18g36340 Gm18 42655641 42656180 Glyma18g36350 Gm18 42671679 42674345 PF03765 CRAL/TRIO, N-terminus Glyma18g36390 Gm18 42695548 42697638 PF00646 F-box domain Glyma18g36430 Gm18 42718875 42720031 PF00646 F-box domain Glyma18g36460 Gm18 42821500 42822039 Glyma18g36490 Gm18 42831724 42834531 PF03765 CRAL/TRIO, N-terminus Glyma18g36520 Gm18 42878985 42879763 Glyma18g36530 Gm18 42880184 42880529 PF03874 RNA polymerase Rpb4 Glyma18g36600 Gm18 42938975 42939322 PF06232 Embryo-specific protein 3, (ATS3) Glyma18g36640 Gm18 42953902 42954186 Glyma18g36660 Gm18 42961961 42982296 PF07529 HSA Glyma18g36690 Gm18 43054778 43064016 PF03765 CRAL/TRIO, N-terminus Glyma18g36750 Gm18 43233909 43242953 PF03348 Serine incorporator (Serinc) Glyma18g36780 Gm18 43308226 43308827 PF00173 Cytochrome b5-like Heme/Steroid binding domain Glyma18g36810 Gm18 43418585 43421296 Glyma18g36820 Gm18 43424076 43426984 PF02234 Cyclin -dependent kinase inhibitor Glyma18g36840 Gm18 43489982 43493002 PF05903 PPPDE putative peptidase domain Glyma18g36860 Gm18 43538203 43544746 PF04884 Protein of unknown function, DUF647 Glyma18g36890 Gm18 43594824 43603952 PF08513 LisH Glyma18g36930 Gm18 43693574 43700253 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma18g36940 Gm18 43715398 43717561 PF01453 D-mannose binding lectin Glyma18g36960 Gm18 43828614 43833181 PF03110 SBP domain Glyma18g37160 Gm18 44383274 44390391 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Glyma18g37360 Gm18 44605624 44617381 PF03732 Retrotransposon gag protein Glyma18g37370 Gm18 44663154 44663865 Glyma18g37400 Gm18 44675404 44679063 PF02992 Transposase family tnp2 Glyma18g37410 Gm18 44679114 44685112 Glyma18g37620 Gm18 44872817 44873664 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma18g37650 Gm18 44889445 44891747 PF00069 Protein kinase domain 145

Glyma18g37720 Gm18 44959940 44960927 Glyma18g37730 Gm18 45014344 45014875

Glyma18g37740 Gm18 45022333 45028997 Glyma18g37970 Gm18 45190132 45195469 PF00957 Synaptobrevin Glyma18g37990 Gm18 45228372 45230628 PF02847 MA3 domain Glyma18g38010 Gm18 45260384 45263758 PF00957 Synaptobrevin Glyma18g38020 Gm18 45266873 45267964 Glyma18g38030 Gm18 45271639 45272034 Glyma18g38050 Gm18 45296526 45300360 PF00515 Tetratricopeptide repeat Glyma18g38060 Gm18 45350065 45352353 PF07719 Tetratricopeptide repeat Glyma18g38120 Gm18 45436650 45441602 PF00646 F-box domain Glyma18g38130 Gm18 45474946 45477280 Glyma18g38140 Gm18 45517388 45522179 PF07800 Protein of unknown function (DUF1644) Glyma18g38260 Gm18 45675959 45677656 PF00439 Bromodomain Glyma18g38270 Gm18 45679296 45688736 PF00564 PB1 domain Glyma18g38310 Gm18 45720351 45721792 Glyma18g38340 Gm18 45749378 45750443 Glyma18g38350 Gm18 45765017 45769651 PF00515 Tetratricopeptide repeat Glyma18g38360 Gm18 45823628 45824705 Glyma18g38390 Gm18 45845220 45848597 PF03732 Retrotransposon gag protein Glyma18g38400 Gm18 45852510 45853805 Glyma18g38410 Gm18 45863780 45866138 PF03108 MuDR family transposase Glyma18g38430 Gm18 45898357 45904963 PF00544 Pectate lyase Glyma18g38440 Gm18 45937427 45940467 PF00560 Leucine Rich Repeat Glyma18g38450 Gm18 45954377 45957796 Glyma18g38470 Gm18 45983961 45987736 PF08263 Leucine rich repeat N-terminal domain Glyma18g38490 Gm18 46010629 46013832 PF02362 B3 DNA binding domain Glyma18g38500 Gm18 46020762 46021148 Glyma18g38530 Gm18 46075939 46076832 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma18g38560 Gm18 46153980 46155608 PF02701 Dof domain, zinc finger Glyma18g38570 Gm18 46205402 46211461 PF04564 U-box domain Glyma18g38610 Gm18 46259396 46262676 PF00023 Ankyrin repeat Glyma18g38620 Gm18 46263698 46266793 Glyma18g38670 Gm18 46319160 46324669 PF08240 Alcohol dehydrogenase GroES-like domain Glyma18g38680 Gm18 46325845 46331253 Glyma18g38690 Gm18 46361504 46363975 PF07732 Multicopper oxidase Glyma18g38700 Gm18 46368917 46371694 PF07732 Multicopper oxidase Glyma18g38710 Gm18 46440953 46443839 PF07732 Multicopper oxidase Glyma18g38720 Gm18 46455341 46457300 PF06232 Embryo-specific protein 3, (ATS3) Glyma18g38750 Gm18 46525855 46526298 Glyma18g38800 Gm18 46598759 46599181 PF00036 EF hand 146

Glyma18g38830 Gm18 46631901 46635893 PF00400 WD domain, G-beta repeat Glyma18g38860 Gm18 46652889 46654648 PF03101 FAR1 DNA-binding domain

Glyma18g38920 Gm18 46799605 46803522 PF00514 Armadillo/beta-catenin-like repeat Glyma18g38950 Gm18 46921631 46932768 PF00514 Armadillo/beta-catenin-like repeat Glyma18g39160 Gm18 47092816 47095761 PF00514 Armadillo/beta-catenin-like repeat Glyma18g39200 Gm18 47207419 47211552 PF00514 Armadillo/beta-catenin-like repeat Glyma18g39500 Gm18 47512864 47517251 PF08414 Respiratory burst NADPH oxidase Glyma18g39520 Gm18 47537827 47539288 PF00046 Homeobox domain Glyma18g39530 Gm18 47558778 47560549 PF03101 FAR1 DNA-binding domain Glyma18g39540 Gm18 47589215 47594833 PF04922 DIE2/ALG10 family Glyma18g39550 Gm18 47595264 47598333 PF02150 RNA polymerases M/15 Kd subunit Glyma18g39570 Gm18 47615855 47625881 PF03283 Pectinacetylesterase Glyma18g39580 Gm18 47618627 47619835 Glyma18g39620 Gm18 47685240 47687354 Glyma18g39630 Gm18 47685399 47687735 PF01535 PPR repeat Glyma18g39640 Gm18 47700128 47702642 PF00481 Protein phosphatase 2C Glyma18g39670 Gm18 47749742 47750151 Glyma18g39690 Gm18 47763183 47764253 PF01439 Metallothionein Glyma18g39710 Gm18 47770444 47772955 PF00225 Kinesin motor domain Glyma18g39720 Gm18 47783385 47784801 Glyma18g39740 Gm18 47819332 47831656 PF00249 Myb -like DNA-binding domain Glyma18g39750 Gm18 47856700 47869117 PF00643 B-box zinc finger Glyma18g39760 Gm18 47891062 47893650 PF00249 Myb-like DNA-binding domain Glyma18g39820 Gm18 47962838 47966284 PF00069 Protein kinase domain Glyma18g39850 Gm18 48028307 48033356 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel Glyma18g39860 Gm18 48119212 48123073 PF01694 Rhomboid family Glyma18g39880 Gm18 48153864 48158378 PF01237 Oxysterol-binding protein Glyma18g39890 Gm18 48186059 48189027 PF04434 SWIM zinc finger Glyma18g39900 Gm18 48192046 48192543 PF12338 Ribulose-1,5-bisphosphate carboxylase small subunit Glyma18g39910 Gm18 48207279 48210232 Glyma18g39920 Gm18 48265734 48268909 PF03514 GRAS family transcription factor Glyma18g39930 Gm18 48272327 48278437 Glyma18g39960 Gm18 48315715 48319074 PF00702 haloacid dehalogenase-like hydrolase Glyma18g39970 Gm18 48400269 48403724 PF03106 WRKY DNA -binding domain Glyma18g40000 Gm18 48449468 48455691 PF03732 Retrotransposon gag protein Glyma18g40050 Gm18 48538330 48542052 PF07732 Multicopper oxidase Glyma18g40060 Gm18 48544594 48548234 Glyma18g40070 Gm18 48550074 48552704 PF07732 Multicopper oxidase Glyma18g40090 Gm18 48585240 48589333 PF11708 Pre-mRNA splicing Prp18-interacting factor Glyma18g40100 Gm18 48594964 48596303 Glyma18g40130 Gm18 48638672 48639547 PF00097 Zinc finger, C3HC4 type (RING finger) 147

Glyma18g40140 Gm18 48660294 48662492 PF01535 PPR repeat Glyma18g40180 Gm18 48724215 48729600 PF02362 B3 DNA binding domain

Glyma18g40190 Gm18 48732443 48742291 PF03171 2OG-Fe(II) oxygenase superfamily Glyma18g40200 Gm18 48743146 48751752 PF03171 2OG-Fe(II) oxygenase superfamily Glyma18g40210 Gm18 48753176 48755889 PF03171 2OG-Fe(II) oxygenase superfamily Glyma18g40220 Gm18 48755672 48757649 Glyma18g40230 Gm18 48758717 48759371 PF00314 Thaumatin family Glyma18g40240 Gm18 48764681 48768350 PF07719 Tetratricopeptide repeat Glyma18g40250 Gm18 48788785 48790700 Glyma18g40280 Gm18 48835212 48835983 Glyma18g40290 Gm18 48839955 48842099 PF00139 Legume lectin domain Glyma18g40310 Gm18 48861709 48863908 PF00139 Legume lectin domain Glyma18g40330 Gm18 48881528 48882796 PF11961 Domain of unknown function (DUF3475) Glyma18g40350 Gm18 48891693 48895010 PF04646 Protein of unknown function, DUF604 Glyma18g40360 Gm18 48935172 48936324 PF00096 Zinc finger, C2H2 type Glyma18g40370 Gm18 48965770 48966681 PF12171 Zinc-finger double-stranded RNA-binding Glyma18g40380 Gm18 48973661 48974647 PF07019 Rab5-interacting protein (Rab5ip) Glyma18g40430 Gm18 49074171 49075214 Glyma18g40470 Gm18 49095391 49095881 Glyma18g40480 Gm18 49103168 49106430 PF00106 short chain dehydrogenase Glyma18g40530 Gm18 49158264 49160343 Glyma18g40560 Gm18 49227039 49229588 PF00106 short chain dehydrogenase Glyma18g40580 Gm18 49231122 49233264 PF00004 ATPase family associated with various cellular activities (AAA) Glyma18g40590 Gm18 49243360 49245126 Glyma18g40600 Gm18 49258599 49271367 PF00415 Regulator of chromosome condensation (RCC1) repeat Glyma18g40610 Gm18 49282885 49287300 Glyma18g40620 Gm18 49292908 49295825 Glyma18g40670 Gm18 49350707 49353971 PF00892 EamA -like transporter family Glyma18g40680 Gm18 49379646 49382887 PF00069 Protein kinase domain Glyma18g40690 Gm18 49384185 49391145 PF00248 Aldo/keto reductase family Glyma18g40730 Gm18 49431177 49431588 Glyma18g40750 Gm18 49438841 49441330 PF02330 Mitochondrial glycoprotein Glyma18g40760 Gm18 49443335 49445226 PF00248 Aldo/keto reductase family Glyma18g40770 Gm18 49453502 49461361 PF00696 Amino acid kinase family Glyma18g40790 Gm18 49532142 49533619 PF00249 Myb-like DNA-binding domain Glyma18g40870 Gm18 49604572 49605165 PF04570 Protein of unknown function (DUF581) Glyma18g41120 Gm18 49802396 49804597 PF03208 PRA1 family protein Glyma18g41130 Gm18 49815103 49819068 PF11891 Domain of unknown function (DUF3411) Glyma18g41140 Gm18 49820920 49823174 PF07690 Major Facilitator Superfamily Glyma18g41230 Gm18 49923457 49924152 PF04759 Protein of unknown function, DUF617 Glyma18g41240 Gm18 49966125 49970004 PF00153 Mitochondrial carrier protein 148

Glyma18g41270 Gm18 50029749 50036113 PF07690 Major Facilitator Superfamily Glyma18g41280 Gm18 50075476 50081244 PF07526 Associated with HOX

Glyma18g41290 Gm18 50112681 50114046 Glyma18g41310 Gm18 50154273 50157961 Glyma18g41320 Gm18 50159968 50161471 PF00234 Protease inhibitor/seed storage/LTP family Glyma18g41330 Gm18 50163831 50167737 PF03759 PRONE (Plant-specific Rop nucleotide exchanger) Glyma18g41340 Gm18 50177763 50178964 PF02798 Glutathione S-transferase, N-terminal domain Glyma18g41350 Gm18 50205414 50207197 PF02798 Glutathione S-transferase, N-terminal domain Glyma18g41410 Gm18 50296558 50297770 PF02798 Glutathione S-transferase, N-terminal domain Glyma18g41420 Gm18 50304042 50305345 PF00582 Universal stress protein family Glyma18g41450 Gm18 50322440 50325611 PF00931 NB-ARC domain Glyma18g41490 Gm18 50396678 50398576 Glyma18g41510 Gm18 50411970 50413333 Glyma18g41520 Gm18 50439632 50441187 PF00249 Myb -like DNA-binding domain Glyma18g41530 Gm18 50453645 50454389 PF04145 Ctr copper transporter family Glyma18g41540 Gm18 50470887 50471580 PF00197 Trypsin and protease inhibitor Glyma18g41590 Gm18 50524449 50525509 PF00234 Protease inhibitor/seed storage/LTP family Glyma18g41600 Gm18 50534367 50536068 PF00560 Leucine Rich Repeat Glyma18g41610 Gm18 50536809 50537114 PF00234 Protease inhibitor/seed storage/LTP family Glyma18g41640 Gm18 50571170 50571615 PF04145 Ctr copper transporter family Glyma18g41650 Gm18 50579673 50580586 PF00011 Hsp20/alpha crystallin family Glyma18g41680 Gm18 50649279 50649448 PF06645 Microsomal signal peptidase 12 kDa subunit (SPC12) Glyma18g41710 Gm18 50690160 50692884 PF12043 Domain of unknown function (DUF3527) Glyma18g41820 Gm18 50747423 50751414 Glyma18g41840 Gm18 50805581 50808143 Glyma18g41860 Gm18 50829362 50835021 PF07732 Multicopper oxidase Glyma18g41870 Gm18 50846148 50850594 PF07732 Multicopper oxidase Glyma18g41900 Gm18 50879673 50879825 Glyma18g41910 Gm18 50893573 50899574 PF07732 Multicopper oxidase Glyma18g41940 Gm18 50939947 50942179 PF00316 Fructose-1-6-bisphosphatase Glyma18g41950 Gm18 50942921 50946126 Glyma18g41960 Gm18 50963682 50966513 PF00560 Leucine Rich Repeat Glyma18g41970 Gm18 50978836 50980338 PF00139 Legume lectin domain Glyma18g41980 Gm18 50989138 50994525 Glyma18g42020 Gm18 51012394 51013861 PF05056 Protein of unknown function (DUF674) Glyma18g42030 Gm18 51018624 51019285 Glyma18g42040 Gm18 51023419 51023853 Glyma18g42050 Gm18 51025709 51026210 Glyma18g42110 Gm18 51079142 51080136 PF01357 Pollen allergen Glyma18g42140 Gm18 51108526 51109990 Glyma18g42150 Gm18 51115584 51117607 149

Glyma18g42160 Gm18 51121892 51123633 PF05056 Protein of unknown function (DUF674) Glyma18g42180 Gm18 51128424 51130071 PF05056 Protein of unknown function (DUF674)

Glyma18g42200 Gm18 51200603 51203202 PF00560 Leucine Rich Repeat Glyma18g42220 Gm18 51228491 51231607 PF00153 Mitochondrial carrier protein Glyma18g42230 Gm18 51247269 51251917 Glyma18g42240 Gm18 51262435 51262863 PF00011 Hsp20/alpha crystallin family Glyma18g42280 Gm18 51290598 51294943 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Glyma18g42290 Gm18 51315693 51316685 Glyma18g42300 Gm18 51322895 51327467 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Glyma18g42310 Gm18 51354672 51360373 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Glyma18g42320 Gm18 51370237 51376887 PF00782 Dual specificity phosphatase, catalytic domain Glyma18g42350 Gm18 51388688 51396579 PF01331 mRNA capping enzyme, catalytic domain Glyma18g42360 Gm18 51399706 51402560 PF06127 Protein of unknown function (DUF962) Glyma18g42470 Gm18 51607336 51609259 PF01535 PPR repeat Glyma18g42480 Gm18 51609894 51611184 Glyma18g42520 Gm18 51650500 51654438 PF07732 Multicopper oxidase Glyma18g42530 Gm18 51658802 51660730 PF00249 Myb-like DNA-binding domain Glyma18g42540 Gm18 51690260 51695011 PF00534 Glycosyl transferases group 1 Glyma18g42560 Gm18 51708954 51709733 Glyma18g42580 Gm18 51780484 51784110 PF01553 Acyltransferase Glyma18g42590 Gm18 51793701 51796171 Glyma18g42610 Gm18 51845282 51848979 PF00560 Leucine Rich Repeat Glyma18g42620 Gm18 51877314 51878360 PF00560 Leucine Rich Repeat Glyma18g42630 Gm18 51879812 51881980 PF00230 Major intrinsic protein Glyma18g42640 Gm18 51937522 51944747 PF01490 Transmembrane amino acid transporter protein Glyma18g42650 Gm18 51950293 51952165 PF01535 PPR repeat Glyma18g42660 Gm18 51954301 51955138 PF04488 Glycosyltransferase sugar-binding region containing DXD motif Glyma18g42700 Gm18 51984694 51988354 PF08263 Leucine rich repeat N-terminal domain Glyma18g42730 Gm18 52006819 52010522 PF08263 Leucine rich repeat N-terminal domain Glyma18g42750 Gm18 52053626 52059720 Glyma18g42770 Gm18 52082732 52085147 PF00560 Leucine Rich Repeat Glyma18g42780 Gm18 52088335 52088663 Glyma18g42790 Gm18 52090939 52099881 PF00035 Double -stranded RNA binding motif Glyma18g42810 Gm18 52117675 52121067 PF00069 Protein kinase domain Glyma18g42850 Gm18 52166910 52171770 Glyma18g42900 Gm18 52191419 52194068 PF03226 Yippee putative zinc-binding protein Glyma18g42910 Gm18 52197127 52200878 PF00717 Peptidase S24-like Glyma18g42920 Gm18 52202713 52205990 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma18g42930 Gm18 52213534 52219113 PF04884 Protein of unknown function, DUF647 Glyma18g42940 Gm18 52256979 52262897 PF08240 Alcohol dehydrogenase GroES-like domain Glyma18g42950 Gm18 52263189 52269646 PF00153 Mitochondrial carrier protein 150

Glyma18g43000 Gm18 52306028 52310283 PF01699 Sodium/calcium exchanger protein Glyma18g43020 Gm18 52341678 52347090 PF04791 LMBR1-like membrane protein

Glyma18g43040 Gm18 52366052 52369394 PF00657 GDSL-like Lipase/Acylhydrolase Glyma18g43070 Gm18 52404325 52408341 PF00657 GDSL-like Lipase/Acylhydrolase Glyma18g43080 Gm18 52411909 52415341 PF00657 GDSL-like Lipase/Acylhydrolase Glyma18g43100 Gm18 52435074 52438457 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma18g43110 Gm18 52444300 52448802 PF00226 DnaJ domain Glyma18g43120 Gm18 52456160 52460703 PF12165 Domain of unknown function (DUF3594) Glyma18g43130 Gm18 52462817 52467716 PF00249 Myb-like DNA-binding domain Glyma18g43140 Gm18 52472821 52479641 PF03171 2OG-Fe(II) oxygenase superfamily Glyma18g43160 Gm18 52542260 52550445 PF00069 Protein kinase domain Glyma18g43170 Gm18 52582315 52582624 PF12609 Wound-induced protein Glyma18g43190 Gm18 52605942 52607269 Glyma18g43200 Gm18 52636646 52638653 Glyma18g43210 Gm18 52649022 52651597 PF11960 Domain of unknown function (DUF3474) Glyma18g43240 Gm18 52678963 52683967 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Glyma18g43250 Gm18 52684212 52685475 Glyma18g43270 Gm18 52696782 52699605 Glyma18g43280 Gm18 52720193 52723044 PF03005 Arabidopsis proteins of unknown function Glyma18g43290 Gm18 52725622 52728653 Glyma18g43300 Gm18 52741130 52745114 PF02630 SCO1/SenC Glyma18g43310 Gm18 52748377 52755587 PF01040 UbiA prenyltransferase family Glyma18g43320 Gm18 52755870 52756835 PF00477 Small hydrophilic plant seed protein Glyma18g43390 Gm18 52905759 52910076 PF00557 Metallopeptidase family M24 Glyma18g43410 Gm18 52924329 52934565 PF03372 Endonuclease/Exonuclease/phosphatase family Glyma18g43420 Gm18 52927167 52944136 PF03810 Importin-beta N-terminal domain Glyma18g43430 Gm18 52961844 52965082 PF00226 DnaJ domain Glyma18g43440 Gm18 52971987 52972752 Glyma18g43460 Gm18 52983903 52986811 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Glyma18g43490 Gm18 53012051 53015492 PF08263 Leucine rich repeat N-terminal domain Glyma18g43500 Gm18 53025588 53028648 PF08263 Leucine rich repeat N-terminal domain Glyma18g43510 Gm18 53042525 53045976 PF00560 Leucine Rich Repeat Glyma18g43520 Gm18 53060498 53063253 PF00560 Leucine Rich Repeat Glyma18g43530 Gm18 53085588 53088887 PF02179 BAG domain Glyma18g43540 Gm18 53090645 53095081 PF00909 Ammonium Transporter Family Glyma18g43550 Gm18 53115976 53117567 PF00249 Myb-like DNA-binding domain Glyma18g43570 Gm18 53142553 53144509 PF00139 Legume lectin domain Glyma18g43580 Gm18 53164326 53166172 PF03514 GRAS family transcription factor Glyma18g43590 Gm18 53179340 53180824 Glyma18g43600 Gm18 53184102 53186722 PF03227 Gamma interferon inducible lysosomal thiol reductase (GILT) Glyma18g43620 Gm18 53193441 53196746 PF00560 Leucine Rich Repeat 151

Glyma18g43630 Gm18 53201503 53204539 PF08263 Leucine rich repeat N-terminal domain Glyma18g43640 Gm18 53222970 53223366

Glyma18g43650 Gm18 53224505 53227234 PF00210 Ferritin-like domain Glyma18g43680 Gm18 53249072 53250029 PF10604 Polyketide cyclase / dehydrase and lipid transport Glyma18g43690 Gm18 53262534 53267056 PF03005 Arabidopsis proteins of unknown function Glyma18g43710 Gm18 53272933 53276206 PF00227 Proteasome subunit Glyma18g43720 Gm18 53286135 53287387 PF00366 Ribosomal protein S17 Glyma18g43730 Gm18 53291651 53295900 PF08263 Leucine rich repeat N-terminal domain Glyma18g43740 Gm18 53298593 53306652 PF01554 MatE Glyma18g43750 Gm18 53307709 53309254 PF00847 AP2 domain Glyma18g43760 Gm18 53319333 53319804 PF03650 Uncharacterised protein family (UPF0041) Glyma18g43790 Gm18 53368143 53368733 PF03208 PRA1 family protein Glyma18g43800 Gm18 53369698 53371453 PF01187 Macrophage migration inhibitory factor (MIF) Glyma18g43830 Gm18 53406138 53408782 Glyma18g43870 Gm18 53454485 53455292 PF01246 Ribosomal protein L24e Glyma18g43880 Gm18 53469392 53473812 PF10539 Development and cell death domain Glyma18g43890 Gm18 53513998 53514165 PF05627 Cleavage site for pathogenic type III effector avirulence factor Avr Glyma18g43900 Gm18 53530379 53531213 PF03018 Dirigent-like protein Glyma18g43910 Gm18 53533457 53536155 PF01535 PPR repeat Glyma18g43920 Gm18 53542222 53545650 PF03765 CRAL/TRIO, N-terminus Glyma18g43940 Gm18 53553949 53557101 PF00248 Aldo/keto reductase family Glyma18g43950 Gm18 53559442 53562764 PF00481 Protein phosphatase 2C Glyma18g43970 Gm18 53574328 53576305 Glyma18g43980 Gm18 53582663 53584339 Glyma18g43990 Gm18 53592857 53594630 Glyma18g44000 Gm18 53600588 53602087 Glyma18g44010 Gm18 53605868 53607364 Glyma18g44020 Gm18 53611371 53613415 PF04535 Domain of unknown function (DUF588) Glyma18g44030 Gm18 53614583 53616292 PF03106 WRKY DNA -binding domain Glyma18g44040 Gm18 53624318 53626493 PF01370 NAD dependent epimerase/dehydratase family Glyma18g44050 Gm18 53646282 53650981 Glyma18g44060 Gm18 53665934 53667564 PF00106 short chain dehydrogenase Glyma18g44070 Gm18 53684258 53685042 Glyma18g44090 Gm18 53721004 53721716 PF07107 Wound -induced protein WI12 Glyma18g44100 Gm18 53726732 53744387 PF01820 D-ala D-ala ligase N-terminus Glyma18g44110 Gm18 53789560 53791139 PF01535 PPR repeat Glyma18g44120 Gm18 53799345 53802595 PF04525 Protein of unknown function (DUF567) Glyma18g44130 Gm18 53804226 53806735 Glyma18g44140 Gm18 53812855 53813893 PF04525 Protein of unknown function (DUF567) Glyma18g44160 Gm18 53827243 53836998 Glyma18g44180 Gm18 53863911 53868877 PF00790 VHS domain 152

Glyma18g44210 Gm18 53871922 53885651 PF02985 HEAT repeat Glyma18g44240 Gm18 53899063 53904381 PF00415 Regulator of chromosome condensation (RCC1) repeat

Glyma18g44250 Gm18 53916866 53923750 PF00202 Aminotransferase class-III Glyma18g44270 Gm18 53964714 53966588 PF01453 D-mannose binding lectin Glyma18g44280 Gm18 53993940 53995507 Glyma18g44300 Gm18 54009597 54011247 PF00234 Protease inhibitor/seed storage/LTP family Glyma18g44310 Gm18 54032367 54035625 PF00141 Peroxidase Glyma18g44320 Gm18 54046963 54049721 PF00141 Peroxidase Glyma18g44330 Gm18 54052391 54055884 Glyma18g44340 Gm18 54067665 54069395 Glyma18g44350 Gm18 54072866 54076983 PF08545 3 -Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Glyma18g44410 Gm18 54099626 54102333 PF05701 Plant protein of unknown function (DUF827) Glyma18g44420 Gm18 54106406 54110226 PF05184 Saposin-like type B, region 1 Glyma18g44440 Gm18 54121640 54123892 PF05184 Saposin-like type B, region 1 Glyma18g44450 Gm18 54148544 54150301 PF00069 Protein kinase domain Glyma18g44460 Gm18 54155717 54159999 PF00352 Transcription factor TFIID (or TATA-binding protein, TBP) Glyma18g44470 Gm18 54165486 54168661 Glyma18g44480 Gm18 54192038 54194026 Glyma18g44490 Gm18 54196581 54196918 Glyma18g44500 Gm18 54199299 54205447 PF05024 N -acetylglucosaminyl transferase component (Gpi1) Glyma18g44510 Gm18 54216634 54218281 PF00069 Protein kinase domain Glyma18g44520 Gm18 54235188 54239103 PF00069 Protein kinase domain Glyma18g44530 Gm18 54242693 54248411 Glyma18g44540 Gm18 54250204 54251055 Glyma18g44550 Gm18 54268276 54273423 PF00122 E1 -E2 ATPase Glyma18g44560 Gm18 54287774 54289782 PF03106 WRKY DNA -binding domain Glyma18g44570 Gm18 54301232 54302657 PF04654 Protein of unknown function, DUF599 Glyma18g44580 Gm18 54311434 54318038 PF02225 PA domain Glyma18g44590 Gm18 54320009 54324248 PF03647 Transmembrane proteins 14C Glyma18g44600 Gm18 54333886 54336892 PF08263 Leucine rich repeat N-terminal domain Glyma18g44610 Gm18 54342916 54350170 Glyma18g44620 Gm18 54357427 54361275 PF08207 (EF-P) KOW-like domain Glyma18g44630 Gm18 54362636 54365544 Glyma18g44640 Gm18 54386557 54387099 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma18g44650 Gm18 54390342 54391137 PF03018 Dirigent-like protein Glyma18g44660 Gm18 54396477 54397504 Glyma18g44670 Gm18 54398910 54400885 PF00234 Protease inhibitor/seed storage/LTP family Glyma18g44680 Gm18 54404095 54404873 PF00234 Protease inhibitor/seed storage/LTP family Glyma18g44690 Gm18 54408729 54413210 PF01823 MAC/Perforin domain Glyma18g44700 Gm18 54419102 54421177 Glyma18g44710 Gm18 54424052 54430456 PF03732 Retrotransposon gag protein 153

Glyma18g44730 Gm18 54439925 54441286 PF01554 MatE Glyma18g44750 Gm18 54475059 54480158

Glyma18g44760 Gm18 54486683 54488455 PF00069 Protein kinase domain Glyma18g44770 Gm18 54493426 54496175 Glyma18g44780 Gm18 54520300 54521408 PF04844 Protein of unknown function, DUF623 Glyma18g44790 Gm18 54529151 54531477 PF09759 Spinocerebellar ataxia type 10 Glyma18g44800 Gm18 54536466 54539338 PF00069 Protein kinase domain Glyma18g44810 Gm18 54540533 54543356 Glyma18g44820 Gm18 54553637 54557333 Glyma18g44830 Gm18 54562288 54565229 PF11721 Di -glucose binding within endoplasmic reticulum Glyma18g44840 Gm18 54569555 54573620 PF00085 Thioredoxin Glyma18g44850 Gm18 54577796 54581424 PF00179 Ubiquitin-conjugating enzyme Glyma18g44860 Gm18 54584976 54593467 Glyma18g44870 Gm18 54593691 54596305 PF08263 Leucine rich repeat N-terminal domain Glyma18g44880 Gm18 54600046 54604465 Glyma18g44900 Gm18 54612654 54617411 PF01040 UbiA prenyltransferase family Glyma18g44910 Gm18 54629878 54632644 PF03000 NPH3 family Glyma18g44930 Gm18 54645596 54662487 PF08263 Leucine rich repeat N-terminal domain Glyma18g44940 Gm18 54675947 54680045 PF00583 Acetyltransferase (GNAT) family Glyma18g44950 Gm18 54701204 54711072 PF08263 Leucine rich repeat N-terminal domain Glyma18g44960 Gm18 54714855 54718683 PF02535 ZIP Zinc transporter Glyma18g44970 Gm18 54726705 54728032 PF11891 Domain of unknown function (DUF3411) Glyma18g44980 Gm18 54745772 54752385 Glyma18g45000 Gm18 54764204 54765578 PF06697 Protein of unknown function (DUF1191) Glyma18g45010 Gm18 54777581 54781027 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma18g45020 Gm18 54782807 54786224 Glyma18g45040 Gm18 54794440 54797567 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma18g45050 Gm18 54799990 54804793 PF03547 Membrane transport protein Glyma18g45060 Gm18 54809667 54813171 PF00067 Cytochrome P450 Glyma18g45070 Gm18 54815033 54819381 PF00067 Cytochrome P450 Glyma18g45080 Gm18 54827997 54828929 PF03168 Late embryogenesis abundant protein Glyma18g45090 Gm18 54830213 54830819 PF03168 Late embryogenesis abundant protein Glyma18g45100 Gm18 54836897 54846831 Glyma18g45110 Gm18 54851038 54855225 Glyma18g45120 Gm18 54863721 54869293 Glyma18g45130 Gm18 54879499 54885343 PF01657 Domain of unknown function DUF26 Glyma18g45140 Gm18 54886748 54890707 PF01657 Domain of unknown function DUF26 Glyma18g45170 Gm18 54918144 54924307 PF01657 Domain of unknown function DUF26 Glyma18g45180 Gm18 54925574 54929943 PF01657 Domain of unknown function DUF26 Glyma18g45190 Gm18 54941308 54945170 PF01657 Domain of unknown function DUF26 Glyma18g45200 Gm18 54949843 54953839 PF07714 Protein tyrosine kinase 154

Glyma18g45210 Gm18 54954460 54964427 PF01467 Cytidylyltransferase Glyma18g45220 Gm18 54983406 54986226 PF03514 GRAS family transcription factor

Glyma18g45230 Gm18 54988088 54997046 PF01501 Glycosyl transferase family 8 Glyma18g45240 Gm18 55000881 55005458 PF01529 DHHC zinc finger domain Glyma18g45250 Gm18 55009048 55011673 PF01370 NAD dependent epimerase/dehydratase family Glyma18g45260 Gm18 55014874 55017649 PF01370 NAD dependent epimerase/dehydratase family Glyma18g45270 Gm18 55023104 55033243 PF00400 WD domain, G-beta repeat Glyma18g45280 Gm18 55035497 55036724 Glyma18g45290 Gm18 55056219 55058493 PF03311 Cornichon protein Glyma18g45300 Gm18 55062019 55067201 PF03479 Domain of unknown function (DUF296) Glyma18g45320 Gm18 55092634 55096973 PF03195 Protein of unknown function DUF260 Glyma18g45330 Gm18 55101799 55104239 PF01535 PPR repeat Glyma18g45340 Gm18 55109968 55120614 PF01369 Sec7 domain Glyma18g45350 Gm18 55123967 55125195 PF00036 EF hand Glyma18g45360 Gm18 55128703 55135146 PF01369 Sec7 domain Glyma18g45370 Gm18 55138445 55147462 PF00225 Kinesin motor domain Glyma18g45380 Gm18 55157110 55160466 PF00701 Dihydrodipicolinate synthetase family Glyma18g45390 Gm18 55161471 55161693 Glyma18g45400 Gm18 55173623 55181269 PF00498 FHA domain Glyma18g45410 Gm18 55187715 55191678 PF12171 Zinc-finger double-stranded RNA-binding Glyma18g45420 Gm18 55197722 55199458 PF02469 Fasciclin domain Glyma18g45440 Gm18 55208227 55215198 PF04212 MIT (microtubule interacting and transport) domain Glyma18g45480 Gm18 55227852 55230988 Glyma18g45490 Gm18 55240644 55241443 Glyma18g45520 Gm18 55255938 55257994 PF00067 Cytochrome P450 Glyma18g45530 Gm18 55264822 55266843 PF00067 Cytochrome P450 Glyma18g45580 Gm18 55320484 55321653 Glyma18g45630 Gm18 55334393 55337796 Glyma18g45640 Gm18 55337897 55340348 Glyma18g45650 Gm18 55347051 55348698 PF02441 Flavoprotein Glyma18g45670 Gm18 55387746 55395175 PF02441 Flavoprotein Glyma18g45690 Gm18 55411158 55412572 PF02441 Flavoprotein Glyma18g45700 Gm18 55419322 55420628 PF02441 Flavoprotein Glyma18g45710 Gm18 55422122 55423370 PF02298 Plastocyanin-like domain Glyma18g45720 Gm18 55427853 55444582 PF00168 C2 domain Glyma18g45750 Gm18 55452028 55456610 PF01501 Glycosyl transferase family 8 Glyma18g45770 Gm18 55473223 55476136 PF00294 pfkB family carbohydrate kinase Glyma18g45780 Gm18 55477111 55495738 PF00319 SRF-type transcription factor (DNA-binding and dimerisation domain) Glyma18g45850 Gm18 55553265 55554433 Glyma18g45890 Gm18 55568063 55571147 PF03061 Thioesterase superfamily Glyma18g45900 Gm18 55592071 55594259 PF00264 Common central domain of tyrosinase 155

Glyma18g45910 Gm18 55617555 55621362 PF00560 Leucine Rich Repeat Glyma18g45920 Gm18 55624684 55625609 PF00168 C2 domain

Glyma18g45930 Gm18 55633146 55633688 PF00168 C2 domain Glyma18g45940 Gm18 55634157 55639057 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma18g45960 Gm18 55644587 55649159 PF00069 Protein kinase domain Glyma18g45970 Gm18 55667266 55673155 PF00046 Homeobox domain Glyma18g45990 Gm18 55701084 55706427 PF03141 Putative methyltransferase Glyma18g46020 Gm18 55730315 55734952 PF03141 Putative methyltransferase Glyma18g46030 Gm18 55757892 55758503 Glyma18g46040 Gm18 55774344 55777391 PF05056 Protein of unknown function (DUF674) Glyma18g46050 Gm18 55808181 55809312 Glyma18g46080 Gm18 55842108 55844249 PF05056 Protein of unknown function (DUF674) Glyma18g46100 Gm18 55871984 55875867 PF00931 NB-ARC domain Glyma18g46120 Gm18 55894782 55896728 Glyma18g46130 Gm18 55900846 55905339 PF00646 F -box domain Glyma18g46140 Gm18 55912056 55917132 PF05648 Peroxisomal biogenesis factor 11 (PEX11) Glyma18g46160 Gm18 55923989 55927673 PF00514 Armadillo/beta-catenin-like repeat Glyma18g46170 Gm18 55936545 55942222 PF00237 Ribosomal protein L22p/L17e Glyma18g46200 Gm18 55961198 55961803 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma18g46210 Gm18 55972099 55972581 Glyma18g46220 Gm18 55973034 55977983 PF00398 Ribosomal RNA adenine dimethylase Glyma18g46230 Gm18 55979381 55983964 PF00752 XPG N-terminal domain Glyma18g46240 Gm18 55996821 56000313 PF08449 UAA transporter family Glyma18g46250 Gm18 56009737 56016876 PF00856 SET domain Glyma18g46260 Gm18 56020498 56027343 PF03124 EXS family Glyma18g46270 Gm18 56028690 56030648 PF01535 PPR repeat Glyma18g46280 Gm18 56038785 56039448 PF01476 LysM domain Glyma18g46290 Gm18 56054373 56061057 PF03105 SPX domain Glyma18g46300 Gm18 56083344 56088332 PF00534 Glycosyl transferases group 1 Glyma18g46310 Gm18 56090551 56094224 Glyma18g46320 Gm18 56094872 56095496 Glyma18g46330 Gm18 56098424 56101644 Glyma18g46340 Gm18 56107137 56114584 PF00390 Malic enzyme, N-terminal domain Glyma18g46350 Gm18 56119981 56122096 Glyma18g46360 Gm18 56125289 56127411 PF01535 PPR repeat Glyma18g46370 Gm18 56131441 56133132 PF01423 LSM domain Glyma18g46380 Gm18 56134761 56137429 PF00106 short chain dehydrogenase Glyma18g46390 Gm18 56140197 56144333 PF03332 Eukaryotic phosphomannomutase Glyma18g46400 Gm18 56144599 56147995 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Glyma18g46410 Gm18 56155226 56157339 Glyma18g46420 Gm18 56160186 56173854 PF00999 Sodium/hydrogen exchanger family 156

Glyma18g46430 Gm18 56177206 56178368 PF01535 PPR repeat Glyma18g46440 Gm18 56179521 56185462 PF01163 RIO1 family

Glyma18g46460 Gm18 56190505 56192420 PF00412 LIM domain Glyma18g46470 Gm18 56198990 56203862 PF03766 Remorin, N-terminal region Glyma18g46480 Gm18 56206516 56208983 PF00249 Myb-like DNA-binding domain Glyma18g46490 Gm18 56217435 56219796 PF05686 Arabidopsis thaliana protein of unknown function (DUF821) Glyma18g46500 Gm18 56222747 56227729 PF00168 C2 domain Glyma18g46510 Gm18 56228802 56233339 PF01138 3' exoribonuclease family, domain 1 Glyma18g46520 Gm18 56235480 56246128 PF00560 Leucine Rich Repeat Glyma18g46530 Gm18 56235798 56245606 Glyma18g46540 Gm18 56251809 56259139 PF02178 AT hook motif Glyma18g46550 Gm18 56279871 56280399 PF00228 Bowman-Birk serine protease inhibitor family Glyma18g46560 Gm18 56291309 56291999 PF00228 Bowman-Birk serine protease inhibitor family Glyma18g46580 Gm18 56303571 56304081 PF00228 Bowman-Birk serine protease inhibitor family Glyma20g17090 Gm20 24154075 24155465 Glyma20g17250 Gm20 24332414 24334417 Glyma20g17280 Gm20 24356048 24362475 PF02485 Core -2/I-Branching enzyme Glyma20g17360 Gm20 24401851 24403150 Glyma20g17400 Gm20 24448281 24449852 PF03000 NPH3 family Glyma20g17410 Gm20 24451049 24453725 Glyma20g17440 Gm20 24512999 24517912 PF01014 Uricase Glyma20g17450 Gm20 24521906 24523748 PF00069 Protein kinase domain Glyma20g17500 Gm20 24545316 24561963 PF03081 Exo70 exocyst complex subunit Glyma20g17560 Gm20 24613814 24616563 PF02861 Clp amino terminal domain Glyma20g17640 Gm20 24709846 24711028 PF00646 F-box domain Glyma20g17960 Gm20 25068695 25074232 PF08701 GNL3L/Grn1 putative GTPase Glyma20g17990 Gm20 25179398 25182183 PF01774 UreD urease accessory protein Glyma20g18010 Gm20 25220416 25231235 PF01535 PPR repeat Glyma20g18280 Gm20 25547943 25551389 PF01397 Terpene synthase, N-terminal domain Glyma20g18290 Gm20 25628261 25640760 PF01871 AMMECR1 Glyma20g18420 Gm20 25854240 25857081 PF00646 F-box domain Glyma20g18440 Gm20 25993689 26000205 PF00560 Leucine Rich Repeat Glyma20g18450 Gm20 26085102 26085820 PF04770 ZF-HD protein dimerisation region Glyma20g18460 Gm20 26120575 26121330 PF04770 ZF-HD protein dimerisation region Glyma20g18520 Gm20 26169199 26169948 PF04770 ZF-HD protein dimerisation region Glyma20g18540 Gm20 26196149 26196750 PF04770 ZF-HD protein dimerisation region Glyma20g18550 Gm20 26223662 26230167 Glyma20g18620 Gm20 26284302 26288301 Glyma20g18860 Gm20 26435691 26438967 PF00957 Synaptobrevin Glyma20g18870 Gm20 26485448 26495566 PF03109 ABC1 family Glyma20g18890 Gm20 26540200 26546510 PF00023 Ankyrin repeat 157

Glyma20g18900 Gm20 26572675 26576431 PF00023 Ankyrin repeat Glyma20g18970 Gm20 26632636 26633714 PF00097 Zinc finger, C3HC4 type (RING finger)

Glyma20g18980 Gm20 26658169 26668370 PF00108 Thiolase, N-terminal domain Glyma20g18990 Gm20 26671300 26673644 PF02892 BED zinc finger Glyma20g19000 Gm20 26702308 26707310 PF00248 Aldo/keto reductase family Glyma20g19200 Gm20 26831485 26837371 PF00544 Pectate lyase Glyma20g19210 Gm20 26867123 26878979 PF01725 Ham1 family Glyma20g19250 Gm20 26989614 26991236 Glyma20g19470 Gm20 27181771 27183179 Glyma20g19550 Gm20 27384996 27387894 PF12552 Protein of unknown function (DUF3741) Glyma20g19580 Gm20 27534641 27536628 Glyma20g19600 Gm20 27663657 27664792 Glyma20g19620 Gm20 27706435 27707431 Glyma20g19640 Gm20 27776755 27778465 Glyma20g19670 Gm20 27876759 27880378 Glyma20g19680 Gm20 27899125 27899596 PF00011 Hsp20/alpha crystallin family Glyma20g19710 Gm20 28009006 28009387 Glyma20g19720 Gm20 28010073 28011091 PF03018 Dirigent -like protein Glyma20g19920 Gm20 28190101 28191176 PF03018 Dirigent-like protein Glyma20g19930 Gm20 28192361 28199087 PF03348 Serine incorporator (Serinc) Glyma20g19940 Gm20 28217825 28218352 Glyma20g19970 Gm20 28227644 28241298 PF00628 PHD -finger Glyma20g19980 Gm20 28288043 28292745 PF00118 TCP-1/cpn60 chaperonin family Glyma20g20010 Gm20 28403441 28407180 PF06212 GRIM-19 protein Glyma20g20040 Gm20 28442487 28443415 Glyma20g20050 Gm20 28456623 28457183 Glyma20g20070 Gm20 28471227 28487025 PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Glyma20g20180 Gm20 28622306 28624436 Glyma20g20280 Gm20 28763533 28765545 PF05060 N -acetylglucosaminyltransferase II (MGAT2) Glyma20g20300 Gm20 28790238 28794121 PF00069 Protein kinase domain Glyma20g20380 Gm20 28965717 28967632 PF01556 DnaJ C terminal region Glyma20g20390 Gm20 29056097 29059474 PF08263 Leucine rich repeat N-terminal domain Glyma20g20600 Gm20 29264478 29266736 PF00400 WD domain, G-beta repeat Glyma20g20630 Gm20 29295450 29296716 Glyma20g20640 Gm20 29353572 29354490 PF05970 PIF1 helicase Glyma20g20840 Gm20 29455663 29457278 Glyma20g20850 Gm20 29465394 29467057 PF05970 PIF1 helicase Glyma20g20880 Gm20 29560376 29561458 Glyma20g20890 Gm20 29604918 29625324 PF00168 C2 domain Glyma20g20900 Gm20 29628314 29628879 Glyma20g20910 Gm20 29643786 29645917 PF01535 PPR repeat 158

Glyma20g20920 Gm20 29666306 29670282 PF02136 Nuclear transport factor 2 (NTF2) domain Glyma20g20930 Gm20 29671654 29673003 PF00168 C2 domain

Glyma20g20950 Gm20 29702905 29707431 Glyma20g20960 Gm20 29797124 29797537 Glyma20g20980 Gm20 29823440 29825078 PF00249 Myb -like DNA-binding domain Glyma20g21000 Gm20 29854550 29856288 PF05970 PIF1 helicase Glyma20g21030 Gm20 29984895 29986397 PF00909 Ammonium Transporter Family Glyma20g21060 Gm20 29990001 29991796 PF03083 MtN3/saliva family Glyma20g21100 Gm20 30090281 30098733 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Glyma20g21130 Gm20 30138096 30139653 PF01657 Domain of unknown function DUF26 Glyma20g21190 Gm20 30239601 30241733 PF07650 KH domain Glyma20g21200 Gm20 30312811 30316725 PF09177 Syntaxin 6, N-terminal Glyma20g21220 Gm20 30340090 30341578 Glyma20g21230 Gm20 30345305 30346033 PF00125 Core histone H2A/H2B/H3/H4 Glyma20g21250 Gm20 30398783 30401373 PF01423 LSM domain Glyma20g21260 Gm20 30403618 30406208 PF10551 MULE transposase domain Glyma20g21270 Gm20 30450830 30453450 PF07719 Tetratricopeptide repeat Glyma20g21320 Gm20 30515291 30516258 Glyma20g21330 Gm20 30528613 30537422 PF08606 Prp19/Pso4 -like Glyma20g21380 Gm20 30639409 30641940 PF06203 CCT motif Glyma20g21390 Gm20 30647494 30648355 Glyma20g21420 Gm20 30686612 30688633 PF12043 Domain of unknown function (DUF3527) Glyma20g21430 Gm20 30691278 30691530 PF00238 Ribosomal protein L14p/L23e Glyma20g21440 Gm20 30712582 30714301 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) Glyma20g21450 Gm20 30727171 30732495 PF02992 Transposase family tnp2 Glyma20g21460 Gm20 30733120 30739905 PF03732 Retrotransposon gag protein Glyma20g21510 Gm20 30848706 30852371 PF01652 Eukaryotic initiation factor 4E Glyma20g21520 Gm20 30860694 30862175 Glyma20g21540 Gm20 30873568 30873806 Glyma20g21550 Gm20 30875450 30878572 Glyma20g21580 Gm20 30931023 30932356 Glyma20g21590 Gm20 30938168 30940792 PF03108 MuDR family transposase Glyma20g21600 Gm20 30943713 30947809 Glyma20g21610 Gm20 31029568 31034319 PF05664 Protein of unknown function (DUF810) Glyma20g21660 Gm20 31109062 31125991 PF00917 MATH domain Glyma20g21780 Gm20 31386550 31389333 PF01590 GAF domain Glyma20g21790 Gm20 31431759 31432953 Glyma20g21810 Gm20 31492135 31493065 PF03479 Domain of unknown function (DUF296) Glyma20g21860 Gm20 31595941 31601484 PF05739 SNARE domain Glyma20g21880 Gm20 31624235 31626231 PF11961 Domain of unknown function (DUF3475) Glyma20g21920 Gm20 31718109 31718399 159

Glyma20g21940 Gm20 31730219 31736579 PF08797 HIRAN domain Glyma20g21960 Gm20 31779113 31785525

Glyma20g21970 Gm20 31790681 31793219 PF05514 HR-like lesion-inducing Glyma20g21980 Gm20 31807072 31808967 PF03171 2OG-Fe(II) oxygenase superfamily Glyma20g22000 Gm20 31827106 31828238 Glyma20g22010 Gm20 31836807 31842259 PF00010 Helix -loop-helix DNA-binding domain Glyma20g22040 Gm20 31905757 31906777 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma20g22050 Gm20 31939665 31941128 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel Glyma20g22060 Gm20 31949734 31950427 Glyma20g22070 Gm20 31959886 31976577 Glyma20g22090 Gm20 31989263 31993579 PF01399 PCI domain Glyma20g22110 Gm20 32002988 32003768 PF01535 PPR repeat Glyma20g22120 Gm20 32004711 32010473 PF00270 DEAD/DEAH box helicase Glyma20g22130 Gm20 32027830 32031625 PF03619 Domain of unknown function Glyma20g22140 Gm20 32033515 32033986 Glyma20g22150 Gm20 32068126 32068914 Glyma20g22160 Gm20 32087661 32093266 PF08446 PAS fold Glyma20g22170 Gm20 32098751 32103750 PF00749 tRNA synthetases class I (E and Q), catalytic domain Glyma20g22180 Gm20 32105236 32107097 PF00190 Cupin Glyma20g22190 Gm20 32108700 32114376 PF00752 XPG N-terminal domain Glyma20g22200 Gm20 32126034 32129925 PF07690 Major Facilitator Superfamily Glyma20g22210 Gm20 32141457 32146580 PF03283 Pectinacetylesterase Glyma20g22230 Gm20 32207323 32209127 PF00249 Myb-like DNA-binding domain Glyma20g22240 Gm20 32264992 32266619 Glyma20g22270 Gm20 32303407 32309223 Glyma20g22280 Gm20 32310377 32313402 PF00010 Helix -loop-helix DNA-binding domain Glyma20g22290 Gm20 32331094 32331431 PF01679 Uncharacterized protein family UPF0057 Glyma20g22300 Gm20 32333591 32334857 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma20g22370 Gm20 32389697 32389963 Glyma20g22380 Gm20 32395823 32396083 Glyma20g22390 Gm20 32406081 32406578 Glyma20g22400 Gm20 32416409 32421485 PF00026 Eukaryotic aspartyl protease Glyma20g22410 Gm20 32426434 32429303 PF01535 PPR repeat Glyma20g22420 Gm20 32436459 32440232 Glyma20g22430 Gm20 32447769 32449767 Glyma20g22470 Gm20 32463040 32465410 PF00628 PHD -finger Glyma20g22490 Gm20 32473652 32474440 PF01535 PPR repeat Glyma20g22510 Gm20 32486622 32491302 Glyma20g22530 Gm20 32494765 32496254 PF07983 X8 domain Glyma20g22550 Gm20 32507633 32511570 PF00069 Protein kinase domain Glyma20g22600 Gm20 32546273 32550838 PF00069 Protein kinase domain 160

Glyma20g22610 Gm20 32551540 32554513 Glyma20g22630 Gm20 32559595 32562694

Glyma20g22650 Gm20 32589230 32589715 Glyma20g22660 Gm20 32594315 32597382 PF00892 EamA -like transporter family Glyma20g22670 Gm20 32598694 32600061 PF00098 Zinc knuckle Glyma20g22680 Gm20 32606776 32610170 PF00025 ADP-ribosylation factor family Glyma20g22690 Gm20 32612282 32614569 Glyma20g22700 Gm20 32618564 32620413 PF01501 Glycosyl transferase family 8 Glyma20g22720 Gm20 32638902 32641609 PF05832 Eukaryotic protein of unknown function (DUF846) Glyma20g22740 Gm20 32644931 32648969 PF01535 PPR repeat Glyma20g22760 Gm20 32655764 32660055 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Glyma20g22770 Gm20 32660949 32666004 PF01535 PPR repeat Glyma20g22780 Gm20 32686309 32690081 PF04853 Plant neutral invertase Glyma20g22790 Gm20 32691355 32693530 Glyma20g22800 Gm20 32703751 32708528 PF01535 PPR repeat Glyma20g22810 Gm20 32710215 32714358 PF05641 Agenet domain Glyma20g22820 Gm20 32720435 32731946 PF05195 Aminopeptidase P, N-terminal domain Glyma20g22830 Gm20 32732847 32736448 PF00581 Rhodanese-like domain Glyma20g22840 Gm20 32747057 32747660 Glyma20g22850 Gm20 32750158 32752137 PF09597 IGR protein motif Glyma20g22860 Gm20 32765643 32766223 Glyma20g22870 Gm20 32791059 32794671 PF06963 Ferroportin1 (FPN1) Glyma20g22880 Gm20 32814099 32816300 PF07646 Glyma20g22890 Gm20 32817217 32818008 Glyma20g22910 Gm20 32861719 32867307 PF00515 Tetratricopeptide repeat Glyma20g22920 Gm20 32871730 32877526 Glyma20g22940 Gm20 32887370 32889104 PF01535 PPR repeat Glyma20g22950 Gm20 32889261 32893871 PF00515 Tetratricopeptide repeat Glyma20g22970 Gm20 32907822 32909609 PF03790 KNOX1 domain Glyma20g22980 Gm20 32912093 32913416 PF03789 ELK domain Glyma20g23000 Gm20 32934471 32936756 PF05433 Rickettsia 17 kDa surface antigen Glyma20g23010 Gm20 32939148 32951034 PF02190 ATP-dependent protease La (LON) domain Glyma20g23020 Gm20 32951693 32954426 Glyma20g23050 Gm20 32996552 32999599 Glyma20g23060 Gm20 33001331 33002196 PF00849 RNA pseudouridylate synthase Glyma20g23070 Gm20 33003761 33007730 PF03030 Inorganic H+ pyrophosphatase Glyma20g23080 Gm20 33012502 33015990 PF00262 Calreticulin family Glyma20g23090 Gm20 33040389 33041564 PF00582 Universal stress protein family Glyma20g23100 Gm20 33041757 33044007 PF01789 PsbP Glyma20g23110 Gm20 33045175 33049008 Glyma20g23120 Gm20 33053170 33054708 PF00646 F -box domain 161

Glyma20g23130 Gm20 33063582 33065600 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Glyma20g23140 Gm20 33068149 33069696 PF06136 Domain of unknown function (DUF966)

Glyma20g23160 Gm20 33091496 33091744 Glyma20g23180 Gm20 33098876 33099657 PF12171 Zinc -finger double-stranded RNA-binding Glyma20g23200 Gm20 33103440 33109042 PF00676 Dehydrogenase E1 component Glyma20g23210 Gm20 33113873 33116924 PF00071 Ras family Glyma20g23220 Gm20 33119018 33120601 PF00046 Homeobox domain Glyma20g23240 Gm20 33138495 33152444 Glyma20g23250 Gm20 33156208 33163319 PF09334 tRNA synthetases class I (M) Glyma20g23260 Gm20 33167934 33169105 PF01284 Membrane-associating domain Glyma20g23270 Gm20 33172196 33172453 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma20g23280 Gm20 33173387 33177104 PF04842 Plant protein of unknown function (DUF639) Glyma20g23290 Gm20 33181617 33184561 Glyma20g23310 Gm20 33190120 33196972 PF00149 Calcineurin -like phosphoesterase Glyma20g23350 Gm20 33206653 33217941 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain Glyma20g23360 Gm20 33249572 33251379 PF08263 Leucine rich repeat N-terminal domain Glyma20g23370 Gm20 33251717 33253453 PF00505 HMG (high mobility group) box Glyma20g23390 Gm20 33271070 33280223 PF00176 SNF2 family N-terminal domain Glyma20g23400 Gm20 33282634 33284245 Glyma20g23410 Gm20 33291035 33299553 PF08241 Methyltransferase domain Glyma20g23420 Gm20 33300586 33301943 PF02798 Glutathione S-transferase, N-terminal domain Glyma20g23430 Gm20 33304129 33307550 PF09745 Coiled-coil domain-containing protein 55 (DUF2040) Glyma20g23440 Gm20 33308636 33308941 Glyma20g23450 Gm20 33310175 33313385 PF11744 Aluminium activated malate transporter Glyma20g23470 Gm20 33316034 33319613 PF11744 Aluminium activated malate transporter Glyma20g23480 Gm20 33322693 33327300 PF11744 Aluminium activated malate transporter Glyma20g23490 Gm20 33328578 33336065 PF00036 EF hand Glyma20g23500 Gm20 33350783 33352701 PF02893 GRAM domain Glyma20g23510 Gm20 33357798 33359283 PF02893 GRAM domain Glyma20g23520 Gm20 33361851 33363500 PF02893 GRAM domain Glyma20g23540 Gm20 33383889 33385059 PF02893 GRAM domain Glyma20g23550 Gm20 33390099 33391695 PF00097 Zinc finger, C3HC4 type (RING finger) Glyma20g23570 Gm20 33399472 33401485 PF00560 Leucine Rich Repeat Glyma20g23580 Gm20 33414118 33417008 PF05705 Eukaryotic protein of unknown function (DUF829) Glyma20g23590 Gm20 33418636 33420312 PF01967 MoaC family Glyma20g23600 Gm20 33422781 33425670

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