(Bplb) INFECTED WHEAT LEAVES Department of Botany, Un
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The Phylogeny of Plant and Animal Pathogens in the Ascomycota
Physiological and Molecular Plant Pathology (2001) 59, 165±187 doi:10.1006/pmpp.2001.0355, available online at http://www.idealibrary.com on MINI-REVIEW The phylogeny of plant and animal pathogens in the Ascomycota MARY L. BERBEE* Department of Botany, University of British Columbia, 6270 University Blvd, Vancouver, BC V6T 1Z4, Canada (Accepted for publication August 2001) What makes a fungus pathogenic? In this review, phylogenetic inference is used to speculate on the evolution of plant and animal pathogens in the fungal Phylum Ascomycota. A phylogeny is presented using 297 18S ribosomal DNA sequences from GenBank and it is shown that most known plant pathogens are concentrated in four classes in the Ascomycota. Animal pathogens are also concentrated, but in two ascomycete classes that contain few, if any, plant pathogens. Rather than appearing as a constant character of a class, the ability to cause disease in plants and animals was gained and lost repeatedly. The genes that code for some traits involved in pathogenicity or virulence have been cloned and characterized, and so the evolutionary relationships of a few of the genes for enzymes and toxins known to play roles in diseases were explored. In general, these genes are too narrowly distributed and too recent in origin to explain the broad patterns of origin of pathogens. Co-evolution could potentially be part of an explanation for phylogenetic patterns of pathogenesis. Robust phylogenies not only of the fungi, but also of host plants and animals are becoming available, allowing for critical analysis of the nature of co-evolutionary warfare. Host animals, particularly human hosts have had little obvious eect on fungal evolution and most cases of fungal disease in humans appear to represent an evolutionary dead end for the fungus. -
A New Species of Bipolaris from Heliconia Rostrata in India
Current Research in Environmental & Applied Mycology 6 (3): 231–237(2016) ISSN 2229-2225 www.creamjournal.org Article CREAM Copyright © 2016 Online Edition Doi 10.5943/cream/6/3/11 A new species of Bipolaris from Heliconia rostrata in India Singh R1 and Kumar S2 1Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi – 221005, Uttar Pradesh, India 2Department of Forest Pathology, Kerala Forest Research Institute, Peechi- 680653, Kerala, India Singh R, Kumar S 2016 − A new species of Bipolaris from Heliconia rostrata in India. Current Research in Environmental & Applied Mycology 6(3), 231– 237, Doi 10.5943/cream/6/3/11 Abstract Bipolaris rostratae, a new foliicolous anamorphic fungus discovered on living leaves of Heliconia rostrata (Heliconiaceae), is described and illustrated. The species was compared with closely related species of Bipolaris and similar fungi recorded on Heliconia spp. This species is different from other Bipolaris spp. reported on Heliconia due to its shorter, thinner and less septate conidia. A key is provided to all species of Bipolaris reported on Heliconia. Key words − fungal diversity – morphotaxonomy – Foliicolous fungi – Bipolaris – new species Introduction After several taxonomic refinements, graminicolous Helminthosporium were segregated into several genera including Bipolaris, Curvularia, Drechslera and Exserohilum (Sivanesan 1987). These genera belong to Ascomycota, Dothideomycetes, Pleosporales, Pleosporaceae. These genera can be distinguished on the basis of characters such as conidial shape and size, hilum morphology, origin of the germ tubes from the basal or other conidial cells, and the location and sequence in the development of the conidial septa. Illustrations of different hilum morphologies in graminicolous Helminthosporium species were given by Alcorn (1988). -
Phytotoxin HC-Toxin (Cyclic Peptide Biosynthesis/Maize/Plant Disease) JONATHAN D
Proc. Nati. Acad. Sci. USA Vol. 84, pp. 8444-8447, December 1987 Botany Two enzymes involved in biosynthesis of the host-selective phytotoxin HC-toxin (cyclic peptide biosynthesis/maize/plant disease) JONATHAN D. WALTON Department of Energy Plant Research Laboratory, Michigan State University, East Lansing, MI 48824 Communicated by Anton Lang, August 24, 1987 (receivedfor review June 2, 1987) ABSTRACT Cochliobolus carbonum race 1 produces a C. carbonum (imperfect stage Helminthosporium carbo- cyclic tetrapeptide HC-toxin, which is necessary for its excep- num or Bipolaris zeicola) race 1 synthesizes the host- tional virulence on certain varieties of maize. Previous genetic selective toxin HC-toxin (8-12). HC-toxin is a cyclic peptide analysis of HC-toxin production by the fungus has indicated with the structure cyclo(D-Pro-L-Ala-D-Ala-L-AOE), where that a single genetic locus controls HC-toxin production. AOE stands for 2-amino-8-oxo-9,10-epoxidecanoic acid (Fig. Enzymes involved in the biosynthesis of HC-toxin have been 1). The unusual amino acid AOE has been reported in three sought by following the precedents established for the biosyn- other cyclic tetrapeptides from three unrelated filamentous thetic enzymes of cyclic peptide antibiotics. Two enzymatic fungi (13-15). Maize (Zea mays L.) that is homozygous activities from C. carbonum race 1 were found, a D-alanine- and recessive at the nuclear Hm locus is susceptible to C. an L-proline-dependent ATP/PPj exchange, which by biochem- carbonum race 1 and sensitive to HC-toxin. Non-toxin- ical and genetic criteria were shown to be involved in the producing isolates (races 2 and 3) of C. -
Fungal Pathogens of Proteaceae
Persoonia 27, 2011: 20–45 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE http://dx.doi.org/10.3767/003158511X606239 Fungal pathogens of Proteaceae P.W. Crous 1,3,8, B.A. Summerell 2, L. Swart 3, S. Denman 4, J.E. Taylor 5, C.M. Bezuidenhout 6, M.E. Palm7, S. Marincowitz 8, J.Z. Groenewald1 Key words Abstract Species of Leucadendron, Leucospermum and Protea (Proteaceae) are in high demand for the interna- tional floriculture market due to their brightly coloured and textured flowers or bracts. Fungal pathogens, however, biodiversity create a serious problem in cultivating flawless blooms. The aim of the present study was to characterise several cut-flower industry of these pathogens using morphology, culture characteristics, and DNA sequence data of the rRNA-ITS and LSU fungal pathogens genes. In some cases additional genes such as TEF 1- and CHS were also sequenced. Based on the results of ITS α this study, several novel species and genera are described. Brunneosphaerella leaf blight is shown to be caused by LSU three species, namely B. jonkershoekensis on Protea repens, B. nitidae sp. nov. on Protea nitida and B. protearum phylogeny on a wide host range of Protea spp. (South Africa). Coniothyrium-like species associated with Coniothyrium leaf systematics spot are allocated to other genera, namely Curreya grandicipis on Protea grandiceps, and Microsphaeropsis proteae on P. nitida (South Africa). Diaporthe leucospermi is described on Leucospermum sp. (Australia), and Diplodina microsperma newly reported on Protea sp. (New Zealand). Pyrenophora blight is caused by a novel species, Pyrenophora leucospermi, and not Drechslera biseptata or D. -
I^ Pearl Millet United States Department of Agriculture
i^ Pearl Millet United States Department of Agriculture Agricultural Service^««««^^^^ A Compilation■ of Information on the Agriculture Known PathoQens of Pearl Millet Handbook No. 716 Pennisetum glaucum (L.) R. Br April 2000 ^ ^ ^ United States Department of Agriculture Pearl Millet Agricultural Research Service Agriculture Handbook j\ Comp¡lation of Information on the No. 716 "^ Known Pathogens of Pearl Millet Pennisetum glaucum (L.) R. Br. Jeffrey P. Wilson Wilson is a research plant pathologist at the USDA-ARS Forage and Turf Research Unit, University of Georgia Coastal Plain Experiment Station, Tifton, GA 31793-0748 Abstract Wilson, J.P. 1999. Pearl Millet Diseases: A Compilation of Information on the Known Pathogens of Pearl Millet, Pennisetum glaucum (L.) R. Br. U.S. Department of Agriculture, Agricultural Research Service, Agriculture Handbook No. 716. Cultivation of pearl millet [Pennisetum glaucum (L.) R.Br.] for grain and forage is expanding into nontraditional areas in temperate and developed countries, where production constraints from diseases assume greater importance. The crop is host to numerous diseases caused by bacteria, fungi, viruses, nematodes, and parasitic plants. Symptoms, pathogen and disease characteristics, host range, geographic distribution, nomenclature discrepancies, and the likelihood of seed transmission for the pathogens are summarized. This bulletin provides useful information to plant pathologists, plant breeders, extension agents, and regulatory agencies for research, diagnosis, and policy making. Keywords: bacterial, diseases, foliar, fungal, grain, nematode, panicle, parasitic plant, pearl millet, Pennisetum glaucum, preharvest, seedling, stalk, viral. This publication reports research involving pesticides. It does not contain recommendations for their use nor does it imply that uses discussed here have been registered. -
The Family Pleosporaceae: Intergeneric Relationships and Phylogenetic Perspectives Based on Sequence Analyses of Partial 28S Rdna
Mycologia, 98(4), 2006, pp. 571–583. # 2006 by The Mycological Society of America, Lawrence, KS 66044-8897 The family Pleosporaceae: intergeneric relationships and phylogenetic perspectives based on sequence analyses of partial 28S rDNA Rampai Kodsueb niothelia, which is probably polyphyletic. Anamorphic Department of Biology, Faculty of Science, Chiang Mai characters appear to be significant (especially in University, Chiang Mai, Thailand Cochliobolus) while ascospore morphologies, such as Vijaykrishna Dhanasekaran shape and color and substrate occurrence are poor Centre for Research in Fungal Diversity, Department of indicators of phylogenetic relationships among these Ecology & Biodiversity, The University of Hong Kong, loculoascomycetes. Pokfulam Road, Hong Kong Key words: anamorphs, ascospore morphology, Andre´ Aptroot Loculoascomycetes, phylogeny, Pleospora, polyphy- Centraalbureau voor Schimmelcultures, P.O. Box letic, ribosomal DNA 85167, 3508 AD Utrecht, The Netherlands Saisamorn Lumyong INTRODUCTION Department of Biology, Faculty of Science, Chiang Mai The largest family within the Pleosporales, Pleospor- University, Chiang Mai, Thailand aceae, comprises 17 genera and 111 species (Kirk et al Eric H.C. McKenzie 2001). Species are parasites or saprobes on wood and Landcare Research, Private Bag 92170, Auckland, dead herbaceous stems or leaves (Sivanesan 1984). New Zealand The classification in the Pleosporaceae has been Kevin D. Hyde based primarily on the Pleospora type of centrum Rajesh Jeewon1 development (Dong et al 1998) and asci that are Centre for Research in Fungal Diversity, Department of interspersed with pseudoparaphyses in the asco- Ecology & Biodiversity, The University of Hong Kong, stroma. These pseudoparaphyses originate above the Pokfulam Road, Hong Kong hymenial layer and grow downward among the asci to fuse at the base of the locule (Wehmeyer 1975). -
Fungus Cochliobolus Carbonum on Maize (HC-Toxln/Phytotoxln/Helnnthosporiun/Plant Disee) DANIEL G
Proc. Nadl. Acad. Sci. USA Vol. 89, pp. 6590-6594, July 1992 Plant Biology A cyclic peptide synthetase gene required for pathogenicity of the fungus Cochliobolus carbonum on maize (HC-toxln/phytotoxln/Helnnthosporiun/plant disee) DANIEL G. PANACCIONE, JOHN S. SCOTT-CRAIG, JEAN-ALAIN POCARD*, AND JONATHAN D. WALTONt Michigan State University-Department of Energy Plant Research Laboratory, East Lansing, MI 48824-1312 Communicated by Anton Lang, April 20, 1992 (receivedfor review February 5, 1992) ABSTRACT Specificty in m-ay plant-pathogen interac- genetically with TOX2 (7). We have undertaken a molecular tions is determined by single genes In pathogen and host. The genetic analysis of HC-toxin biosynthesis with the goals of single locus for host-selective pathogenicity (TOX2) in the understanding the nature ofthe economically important TOX fungus Cochkobolus carbonum governs production of a cyclic loci ofCochliobolus and the evolution ofnew races in this and tetrapeptide named HC-toxin. We have isolated a chronoso- related pathogens. mal region, 22 kilobases (kb) long, that contains a 15.7-kb open reading frame (HTSI) enc g a mtu l cyclic pep- tide synthetase. The 22-kb chromosomal region Is du ed in MATERIALS AND METHODS toxin-producing Isolates of the fungus but Is completely absent Nucleic Acid Manipulations. Isolation of fungal DNA and from the genomes of toxin-nonproducing Isolates. Mutants of construction of the genomic DNA library in phage AEMBL3 the fungus with disruptions in both coples ofHTS1, at either of were as described (9). Subcloning was done into pBluescript two different sites within HTSI, were engineered by DNA- (Stratagene) or pUC18 (BRL). -
Some Studies on Leaf Spot of Oats and Triticale Mohammed Abdullah Lashram South Dakota State University
South Dakota State University Open PRAIRIE: Open Public Research Access Institutional Repository and Information Exchange Electronic Theses and Dissertations 2019 Some Studies on Leaf Spot of Oats and Triticale Mohammed Abdullah Lashram South Dakota State University Follow this and additional works at: https://openprairie.sdstate.edu/etd Part of the Agronomy and Crop Sciences Commons, and the Plant Pathology Commons Recommended Citation Lashram, Mohammed Abdullah, "Some Studies on Leaf Spot of Oats and Triticale" (2019). Electronic Theses and Dissertations. 3125. https://openprairie.sdstate.edu/etd/3125 This Thesis - Open Access is brought to you for free and open access by Open PRAIRIE: Open Public Research Access Institutional Repository and Information Exchange. It has been accepted for inclusion in Electronic Theses and Dissertations by an authorized administrator of Open PRAIRIE: Open Public Research Access Institutional Repository and Information Exchange. For more information, please contact [email protected]. SOME STUDIES ON LEAF SPOT OF OATS AND TRITICALE BY MOHAMMED ABDULLAH LASHRAM A thesis submitted in partial fulfillment of the requirements for the Master of Science Major in Plant Science South Dakota State University 2019 iii ACKNOWLEDGEMENTS First and foremost, I wish to pay my sincere regards to the Almighty, who provided me with an opportunity, to begin with, my research for my MS and making me conduct it successfully. My most heartfelt thanks to my advisor Dr. Shaukat Ali for providing me a platform for working on this project as a master thesis. He has been my source of inspiration and encouragement throughout my stay at SDSU. I especially want to thank Dr. -
Diversity of Natural Products of the Genera Curvularia and Bipolaris
fungal biology reviews 33 (2019) 101e122 journal homepage: www.elsevier.com/locate/fbr Review Diversity of natural products of the genera Curvularia and Bipolaris Afra KHIRALLAa,b, Rosella SPINAb, Sahar SALIBAb, Dominique LAURAIN-MATTARb,* aBotany Department, Faculty of Sciences and Technologies, Shendi University, P.O. Box 142, Shendi, Sudan bUniversite de Lorraine, CNRS, L2CM, F-54000, Nancy, France article info abstract Article history: Covering from 1963 to 2017. Received 24 May 2018 This review provides a summary of some secondary metabolites isolated from the genera Accepted 17 September 2018 Curvularia and Bipolaris from 1963 to 2017. The study has a broad objective. First to afford an overview of the structural diversity of these genera, classifying them depending on their Keywords: chemical classes, highlighting individual examples of chemical structures. Also some in- Anti-malarial activity formation regarding their biological activities are presented. Several of the compounds re- Bipolaris ported here were isolated exclusively from endophytic and pathogenic strains in culture, Curvularia while few from other sources such as sea Anemone and fish. Some secondary metabolites Fungicidal activity of the genus Curvularia and Bipolaris revealed a fascinating biological activities included: Leishmanicidal activity anti-malarial, anti-biofouling, anti-larval, anti-inflammatory, anti-oxidant, anti-bacterial, Secondary metabolites anti-fungal, anti-cancer, leishmanicidal and phytotoxicity. Herein, we presented a bibliog- raphy of the researches accomplished on the natural products of Curvularia and Bipolaris, which could help in the future prospecting of novel or new analogues of active metabolites from these two genera. ª 2018 British Mycological Society. Published by Elsevier Ltd. All rights reserved. -
Hidden Fungi: Combining Culture-Dependent and -Independent DNA Barcoding Reveals Inter-Plant Variation in Species Richness of Endophytic Root Fungi in Elymus Repens
Journal of Fungi Article Hidden Fungi: Combining Culture-Dependent and -Independent DNA Barcoding Reveals Inter-Plant Variation in Species Richness of Endophytic Root Fungi in Elymus repens Anna K. Høyer and Trevor R. Hodkinson * Botany, School of Natural Sciences, Trinity College Dublin, The University of Dublin, Dublin D2, Ireland; [email protected] * Correspondence: [email protected] Abstract: The root endophyte community of the grass species Elymus repens was investigated using both a culture-dependent approach and a direct amplicon sequencing method across five sites and from individual plants. There was much heterogeneity across the five sites and among individual plants. Focusing on one site, 349 OTUs were identified by direct amplicon sequencing but only 66 OTUs were cultured. The two approaches shared ten OTUs and the majority of cultured endo- phytes do not overlap with the amplicon dataset. Media influenced the cultured species richness and without the inclusion of 2% MEA and full-strength MEA, approximately half of the unique OTUs would not have been isolated using only PDA. Combining both culture-dependent and -independent methods for the most accurate determination of root fungal species richness is therefore recom- mended. High inter-plant variation in fungal species richness was demonstrated, which highlights the need to rethink the scale at which we describe endophyte communities. Citation: Høyer, A.K.; Hodkinson, T.R. Hidden Fungi: Combining Culture-Dependent and -Independent Keywords: DNA barcoding; Elymus repens; fungal root endophytes; high-throughput amplicon DNA Barcoding Reveals Inter-Plant sequencing; MEA; PDA Variation in Species Richness of Endophytic Root Fungi in Elymus repens. J. Fungi 2021, 7, 466. -
Proposed Generic Names for Dothideomycetes
Naming and outline of Dothideomycetes–2014 Nalin N. Wijayawardene1, 2, Pedro W. Crous3, Paul M. Kirk4, David L. Hawksworth4, 5, 6, Dongqin Dai1, 2, Eric Boehm7, Saranyaphat Boonmee1, 2, Uwe Braun8, Putarak Chomnunti1, 2, , Melvina J. D'souza1, 2, Paul Diederich9, Asha Dissanayake1, 2, 10, Mingkhuan Doilom1, 2, Francesco Doveri11, Singang Hongsanan1, 2, E.B. Gareth Jones12, 13, Johannes Z. Groenewald3, Ruvishika Jayawardena1, 2, 10, James D. Lawrey14, Yan Mei Li15, 16, Yong Xiang Liu17, Robert Lücking18, Hugo Madrid3, Dimuthu S. Manamgoda1, 2, Jutamart Monkai1, 2, Lucia Muggia19, 20, Matthew P. Nelsen18, 21, Ka-Lai Pang22, Rungtiwa Phookamsak1, 2, Indunil Senanayake1, 2, Carol A. Shearer23, Satinee Suetrong24, Kazuaki Tanaka25, Kasun M. Thambugala1, 2, 17, Saowanee Wikee1, 2, Hai-Xia Wu15, 16, Ying Zhang26, Begoña Aguirre-Hudson5, Siti A. Alias27, André Aptroot28, Ali H. Bahkali29, Jose L. Bezerra30, Jayarama D. Bhat1, 2, 31, Ekachai Chukeatirote1, 2, Cécile Gueidan5, Kazuyuki Hirayama25, G. Sybren De Hoog3, Ji Chuan Kang32, Kerry Knudsen33, Wen Jing Li1, 2, Xinghong Li10, ZouYi Liu17, Ausana Mapook1, 2, Eric H.C. McKenzie34, Andrew N. Miller35, Peter E. Mortimer36, 37, Dhanushka Nadeeshan1, 2, Alan J.L. Phillips38, Huzefa A. Raja39, Christian Scheuer19, Felix Schumm40, Joanne E. Taylor41, Qing Tian1, 2, Saowaluck Tibpromma1, 2, Yong Wang42, Jianchu Xu3, 4, Jiye Yan10, Supalak Yacharoen1, 2, Min Zhang15, 16, Joyce Woudenberg3 and K. D. Hyde1, 2, 37, 38 1Institute of Excellence in Fungal Research and 2School of Science, Mae Fah Luang University, -
Endophytic Fungal Communities of Bromus Tectorum: Mutualisms, Community Assemblages and Implications for Invasion
ENDOPHYTIC FUNGAL COMMUNITIES OF BROMUS TECTORUM: MUTUALISMS, COMMUNITY ASSEMBLAGES AND IMPLICATIONS FOR INVASION A Thesis Presented in Partial Fulfillment of the Requirement for the Degree of Master of Science with a Major in Environmental Science in the College of Graduate Studies University of Idaho by Melissa A. Baynes August 2011 Major Professor: George Newcombe, Ph.D. ii AUTHORIZATION TO SUBMIT THESIS This thesis of Melissa A. Baynes, submitted for the degree of Master of Science with a major in Environmental Science and titled “ENDOPHYTIC FUNGAL COMMUNITIES OF BROMUS TECTORUM: MUTUALISMS, COMMUNITY ASSEMBLAGES AND IMPLICATIONS FOR INVASION,” has been reviewed in final form. Permission, as indicated by the signatures and dates given below, is now granted to submit final copies to the College of Graduate Studies for approval. iii ABSTRACT Exotic plant invasions are of serious economic, social and ecological concern worldwide. Although many promising hypotheses have been posited in attempt to explain the mechanism(s) by which plant invaders are successful, there is no single explanation for all invasions and often no single explanation for the success of an individual species. Cheatgrass (Bromus tectorum), an annual grass native to Eurasia, is an aggressive invader throughout the United States and Canada. Because it can alter fire regimes, cheatgrass is especially problematic in the sagebrush steppe of western North America. Its pre- adaptation to invaded climates, ability to alter community dynamics and ability to compete as a mycorrhizal or non-mycorrhizal plant may contribute to its success as an invader. However, its success is likely influenced by a variety of other mechanisms including symbiotic associations with endophytic fungi.