Evolution 2 Speciation
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SDG Indicator Metadata (Harmonized Metadata Template - Format Version 1.0)
Last updated: 4 January 2021 SDG indicator metadata (Harmonized metadata template - format version 1.0) 0. Indicator information 0.a. Goal Goal 15: Protect, restore and promote sustainable use of terrestrial ecosystems, sustainably manage forests, combat desertification, and halt and reverse land degradation and halt biodiversity loss 0.b. Target Target 15.5: Take urgent and significant action to reduce the degradation of natural habitats, halt the loss of biodiversity and, by 2020, protect and prevent the extinction of threatened species 0.c. Indicator Indicator 15.5.1: Red List Index 0.d. Series 0.e. Metadata update 4 January 2021 0.f. Related indicators Disaggregations of the Red List Index are also of particular relevance as indicators towards the following SDG targets (Brooks et al. 2015): SDG 2.4 Red List Index (species used for food and medicine); SDG 2.5 Red List Index (wild relatives and local breeds); SDG 12.2 Red List Index (impacts of utilisation) (Butchart 2008); SDG 12.4 Red List Index (impacts of pollution); SDG 13.1 Red List Index (impacts of climate change); SDG 14.1 Red List Index (impacts of pollution on marine species); SDG 14.2 Red List Index (marine species); SDG 14.3 Red List Index (reef-building coral species) (Carpenter et al. 2008); SDG 14.4 Red List Index (impacts of utilisation on marine species); SDG 15.1 Red List Index (terrestrial & freshwater species); SDG 15.2 Red List Index (forest-specialist species); SDG 15.4 Red List Index (mountain species); SDG 15.7 Red List Index (impacts of utilisation) (Butchart 2008); and SDG 15.8 Red List Index (impacts of invasive alien species) (Butchart 2008, McGeoch et al. -
Improvements to the Red List Index Stuart H
Improvements to the Red List Index Stuart H. M. Butchart1*, H. Resit Akc¸akaya2, Janice Chanson3, Jonathan E. M. Baillie4, Ben Collen4, Suhel Quader5,8, Will R. Turner6, Rajan Amin4, Simon N. Stuart3, Craig Hilton-Taylor7 1 BirdLife International, Cambridge, United Kingdom, 2 Applied Biomathematics, Setauket, New York, United States of America, 3 Conservation International/Center for Applied Biodiversity Science-World Conservation Union (IUCN)/Species Survival Commission Biodiversity Assessment Unit, IUCN Species Programme, Center for Applied Biodiversity Science, Conservation International, Washington, D. C., United States of America, 4 Institute of Zoology, Zoological Society of London, London, United Kingdom, 5 Department of Zoology, University of Cambridge, Cambridge, United Kingdom, 6 Center for Applied Biodiversity Science, Conservation International, Washington, D. C., United States of America, 7 World Conservation Union (IUCN) Species Programme, Cambridge, United Kingdom, 8 Royal Society for the Protection of Birds, Sandy, United Kingdom The Red List Index uses information from the IUCN Red List to track trends in the projected overall extinction risk of sets of species. It has been widely recognised as an important component of the suite of indicators needed to measure progress towards the international target of significantly reducing the rate of biodiversity loss by 2010. However, further application of the RLI (to non-avian taxa in particular) has revealed some shortcomings in the original formula and approach: It performs inappropriately when a value of zero is reached; RLI values are affected by the frequency of assessments; and newly evaluated species may introduce bias. Here we propose a revision to the formula, and recommend how it should be applied in order to overcome these shortcomings. -
Lineages, Splits and Divergence Challenge Whether the Terms Anagenesis and Cladogenesis Are Necessary
Biological Journal of the Linnean Society, 2015, , – . With 2 figures. Lineages, splits and divergence challenge whether the terms anagenesis and cladogenesis are necessary FELIX VAUX*, STEVEN A. TREWICK and MARY MORGAN-RICHARDS Ecology Group, Institute of Agriculture and Environment, Massey University, Palmerston North, New Zealand Received 3 June 2015; revised 22 July 2015; accepted for publication 22 July 2015 Using the framework of evolutionary lineages to separate the process of evolution and classification of species, we observe that ‘anagenesis’ and ‘cladogenesis’ are unnecessary terms. The terms have changed significantly in meaning over time, and current usage is inconsistent and vague across many different disciplines. The most popular definition of cladogenesis is the splitting of evolutionary lineages (cessation of gene flow), whereas anagenesis is evolutionary change between splits. Cladogenesis (and lineage-splitting) is also regularly made synonymous with speciation. This definition is misleading as lineage-splitting is prolific during evolution and because palaeontological studies provide no direct estimate of gene flow. The terms also fail to incorporate speciation without being arbitrary or relative, and the focus upon lineage-splitting ignores the importance of divergence, hybridization, extinction and informative value (i.e. what is helpful to describe as a taxon) for species classification. We conclude and demonstrate that evolution and species diversity can be considered with greater clarity using simpler, more transparent terms than anagenesis and cladogenesis. Describing evolution and taxonomic classification can be straightforward, and there is no need to ‘make words mean so many different things’. © 2015 The Linnean Society of London, Biological Journal of the Linnean Society, 2015, 00, 000–000. -
Reproductive Mode and Speciation: the Viviparity-Driven Conflict Liypothesis David W
Hypothesis Reproductive mode and speciation: the viviparity-driven conflict liypothesis David W. Zeh* and Jeanne A. Zeh Summary in the speciation process.*^"®' With patterns in nature (see In birds and frogs, species pairs retain the capacity to below) exhibiting profound between-lineage differences in produce viable hybrids for tens of millions of years, an order of magnitude longer than mammals. What the relative rates at which pre- and postzygotic isolation accounts for these differences in relative rates of pre- evolve,*^~^°' a unifying theory of speciation has remained and postzygotic isolation? We propose that reproduc- elusive. Here, we present a new hypothesis to account for the tive mode is a critically important but previously over- extreme disparity that exists between lineages in patterns of looked factor in the speciation process. Viviparity speciation. This viviparity-driven conflict hypothesis proposes creates a post-fertilization arena for genomic conflicts absent in egg-laying species. With viviparity, conflict that the reproductive stage at which divergence occurs most can arise between: mothers and embryos; sibling rapidly between populations is strongly influenced by the embryos in the womb, and maternal and paternal degree to which embryonic development involves physiolo- genomes within individual embryos. Such intra- and gical interactions between mother and embryo. After briefly intergenomic conflicts result in perpetual antagonistic reviewing between-lineage differences in patterns of specia- coevolution, thereby accelerating interpopulation post- zygotic isolation. In addition, by generating intrapopula- tion, we develop the hypothesis that postzygotic isolation tion genetic incompatibility, viviparity-driven conflict should evolve more rapidly in viviparous animals than in favors polyandry and limits the potential for precopula- oviparous species, because development of the embryo tory divergence. -
A Continuous Plate-Tectonic Model Using Geophysical Data to Estimate
GEOPHYSICAL JOURNAL INTERNATIONAL, 133, 379–389, 1998 1 A continuous plate-tectonic model using geophysical data to estimate plate margin widths, with a seismicity based example Caroline Dumoulin1, David Bercovici2, Pal˚ Wessel Department of Geology & Geophysics, School of Ocean and Earth Science and Technology, University of Hawaii, Honolulu, 96822, USA Summary A continuous kinematic model of present day plate motions is developed which 1) provides more realistic models of plate shapes than employed in the original work of Bercovici & Wessel [1994]; and 2) provides a means whereby geophysical data on intraplate deformation is used to estimate plate margin widths for all plates. A given plate’s shape function (which is unity within the plate, zero outside the plate) can be represented by analytic functions so long as the distance from a point inside the plate to the plate’s boundary can be expressed as a single valued function of azimuth (i.e., a single-valued polar function). To allow sufficient realism to the plate boundaries, without the excessive smoothing used by Bercovici and Wessel, the plates are divided along pseudoboundaries; the boundaries of plate sections are then simple enough to be modelled as single-valued polar functions. Moreover, the pseudoboundaries have little or no effect on the final results. The plate shape function for each plate also includes a plate margin function which can be constrained by geophysical data on intraplate deformation. We demonstrate how this margin function can be determined by using, as an example data set, the global seismicity distribution for shallow (depths less than 29km) earthquakes of magnitude greater than 4. -
A Robust Goal Is Needed for Species in the Post-2020 Global Biodiversity Framework
Preprints (www.preprints.org) | NOT PEER-REVIEWED | Posted: 16 April 2020 Title: A robust goal is needed for species in the Post-2020 Global Biodiversity Framework Running title: A post-2020 goal for species conservation Authors: Brooke A. Williams*1,2, James E.M. Watson1,2,3, Stuart H.M. Butchart4,5, Michelle Ward1,2, Nathalie Butt2, Friederike C. Bolam6, Simon N. Stuart7, Thomas M. Brooks8,9,10, Louise Mair6, Philip J. K. McGowan6, Craig Hilton-Taylor11, David Mallon12, Ian Harrison8,13, Jeremy S. Simmonds1,2. Affiliations: 1School of Earth and Environmental Sciences, University of Queensland, St Lucia 4072, Australia 2Centre for Biodiversity and Conservation Science, School of Biological Sciences, University of Queensland, St Lucia 4072, Queensland, Australia. 3Wildlife Conservation Society, Global Conservation Program, Bronx, NY 20460, USA. 4BirdLife International, The David Attenborough Building, Pembroke Street, Cambridge CB2 3QZ, UK 5Department of Zoology, Cambridge University, Downing Street, Cambridge CB2 3EJ, UK 6School of Natural and Environmental Sciences, Newcastle University, Newcastle upon Tyne, NE1 7RU, UK 7Synchronicity Earth, 27-29 Cursitor Street, London, EC4A 1LT, UK 8IUCN, 28 rue Mauverney, CH-1196, Gland, Switzerland 9World Agroforestry Center (ICRAF), University of the Philippines Los Baños, Laguna, 4031, Philippines 10Institute for Marine and Antarctic Studies, University of Tasmania, Hobart, TAS 7001, Australia 11IUCN, The David Attenborough Building, Pembroke Street, Cambridge CB2 3QZ, UK 12Division of Biology and Conservation Ecology, Manchester Metropolitan University, Chester St, Manchester, M1 5GD, U.K 13Conservation International, Arlington, VA 22202, USA Emails: Brooke A. Williams: [email protected]; James E.M. Watson: [email protected]; Stuart H.M. -
Sterngeryatctnphys18.Pdf
Tectonophysics 746 (2018) 173–198 Contents lists available at ScienceDirect Tectonophysics journal homepage: www.elsevier.com/locate/tecto Subduction initiation in nature and models: A review T ⁎ Robert J. Sterna, , Taras Geryab a Geosciences Dept., U Texas at Dallas, Richardson, TX 75080, USA b Institute of Geophysics, Dept. of Earth Sciences, ETH, Sonneggstrasse 5, 8092 Zurich, Switzerland ARTICLE INFO ABSTRACT Keywords: How new subduction zones form is an emerging field of scientific research with important implications for our Plate tectonics understanding of lithospheric strength, the driving force of plate tectonics, and Earth's tectonic history. We are Subduction making good progress towards understanding how new subduction zones form by combining field studies to Lithosphere identify candidates and reconstruct their timing and magmatic evolution and undertaking numerical modeling (informed by rheological constraints) to test hypotheses. Here, we review the state of the art by combining and comparing results coming from natural observations and numerical models of SI. Two modes of subduction initiation (SI) can be identified in both nature and models, spontaneous and induced. Induced SI occurs when pre-existing plate convergence causes a new subduction zone to form whereas spontaneous SI occurs without pre-existing plate motion when large lateral density contrasts occur across profound lithospheric weaknesses of various origin. We have good natural examples of 3 modes of subduction initiation, one type by induced nu- cleation of a subduction zone (polarity reversal) and two types of spontaneous nucleation of a subduction zone (transform collapse and plumehead margin collapse). In contrast, two proposed types of subduction initiation are not well supported by natural observations: (induced) transference and (spontaneous) passive margin collapse. -
Allopatric Speciation with Little Niche Divergence Is Common Among
Journal of Biogeography (J. Biogeogr.) (2016) 43, 591–602 ORIGINAL Allopatric speciation with little niche ARTICLE divergence is common among alpine Primulaceae Florian C. Boucher1*, Niklaus E. Zimmermann2,3 and Elena Conti1 1Institute of Systematic Botany, University of ABSTRACT Zurich,€ 8008 Zurich,€ Switzerland, 2Dynamic Aim Despite the accumulation of cases describing fast radiations of alpine Macroecology, Swiss Federal Research plants, we still have limited understanding of the drivers of speciation in alpine Institute WSL, 8903 Birmensdorf, Switzerland, 3Department of Environmental floras and of the precise the timing of their diversification. Here, we investi- Systems Science, Swiss Federal Institute of gated spatial and temporal patterns of speciation in three groups of alpine Technology ETH, CH-8092 Zurich,€ Primulaceae. Switzerland Location Mountains of the European Alpine System. Methods We built a new phylogeny of Primulaceae including all species in three focal groups: Androsace sect. Aretia, Primula sect. Auricula and Soldanella. Combining phylogenetic information with a detailed climatic data set, we investigated patterns of range and ecological overlap between sister-species using an approach that takes phylogenetic uncertainty into account. Finally, we investigated temporal trajectories of diversification in the three focal groups. Results We found that a large majority of sister-species pairs in the three groups are strictly allopatric and show little differences in substrate and cli- matic preferences, a result that was robust to phylogenetic uncertainty. While rates of diversification have remained constant in Soldanella, both Androsace sect. Aretia and Primula sect. Auricula showed decreased diversification rates in the Pleistocene compared to previous geological epochs. Main conclusions Allopatric speciation with little niche divergence appears to have been by far the most common mode of speciation across the three groups studied. -
Environmental Geology Chapter 2 -‐ Plate Tectonics and Earth's Internal
Environmental Geology Chapter 2 - Plate Tectonics and Earth’s Internal Structure • Earth’s internal structure - Earth’s layers are defined in two ways. 1. Layers defined By composition and density o Crust-Less dense rocks, similar to granite o Mantle-More dense rocks, similar to peridotite o Core-Very dense-mostly iron & nickel 2. Layers defined By physical properties (solid or liquid / weak or strong) o Lithosphere – (solid crust & upper rigid mantle) o Asthenosphere – “gooey”&hot - upper mantle o Mesosphere-solid & hotter-flows slowly over millions of years o Outer Core – a hot liquid-circulating o Inner Core – a solid-hottest of all-under great pressure • There are 2 types of crust ü Continental – typically thicker and less dense (aBout 2.8 g/cm3) ü Oceanic – typically thinner and denser (aBout 2.9 g/cm3) The Moho is a discontinuity that separates lighter crustal rocks from denser mantle below • How do we know the Earth is layered? That knowledge comes primarily through the study of seismology: Study of earthquakes and seismic waves. We look at the paths and speeds of seismic waves. Earth’s interior boundaries are defined by sudden changes in the speed of seismic waves. And, certain types of waves will not go through liquids (e.g. outer core). • The face of Earth - What we see (Observations) Earth’s surface consists of continents and oceans, including mountain belts and “stable” interiors of continents. Beneath the ocean, there are continental shelfs & slopes, deep sea basins, seamounts, deep trenches and high mountain ridges. We also know that Earth is dynamic and earthquakes and volcanoes are concentrated in certain zones. -
Coupling, Reinforcement, and Speciation Roger Butlin, Carole Smadja
Coupling, Reinforcement, and Speciation Roger Butlin, Carole Smadja To cite this version: Roger Butlin, Carole Smadja. Coupling, Reinforcement, and Speciation. American Naturalist, Uni- versity of Chicago Press, 2018, 191 (2), pp.155-172. 10.1086/695136. hal-01945350 HAL Id: hal-01945350 https://hal.archives-ouvertes.fr/hal-01945350 Submitted on 5 Dec 2018 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Distributed under a Creative Commons Attribution| 4.0 International License vol. 191, no. 2 the american naturalist february 2018 Synthesis Coupling, Reinforcement, and Speciation Roger K. Butlin1,2,* and Carole M. Smadja1,3 1. Stellenbosch Institute for Advanced Study, Wallenberg Research Centre at Stellenbosch University, Stellenbosch 7600, South Africa; 2. Department of Animal and Plant Sciences, The University of Sheffield, Sheffield S10 2TN, United Kingdom; and Department of Marine Sciences, University of Gothenburg, Tjärnö SE-45296 Strömstad, Sweden; 3. Institut des Sciences de l’Evolution, Unité Mixte de Recherche 5554 (Centre National de la Recherche Scientifique–Institut de Recherche pour le Développement–École pratique des hautes études), Université de Montpellier, 34095 Montpellier, France Submitted March 15, 2017; Accepted August 28, 2017; Electronically published December 15, 2017 abstract: During the process of speciation, populations may di- Introduction verge for traits and at their underlying loci that contribute barriers Understanding how reproductive isolation evolves is key fl to gene ow. -
References L
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln USGS Northern Prairie Wildlife Research Center Wildlife Damage Management, Internet Center for 2003 References L. David Mech USGS Northern Prairie Wildlife Research Center, [email protected] Luigi Boitani University of Rome, [email protected] Follow this and additional works at: https://digitalcommons.unl.edu/usgsnpwrc Part of the Animal Sciences Commons, Behavior and Ethology Commons, Biodiversity Commons, Environmental Policy Commons, Recreation, Parks and Tourism Administration Commons, and the Terrestrial and Aquatic Ecology Commons Mech, L. David and Boitani, Luigi, "References" (2003). USGS Northern Prairie Wildlife Research Center. 320. https://digitalcommons.unl.edu/usgsnpwrc/320 This Article is brought to you for free and open access by the Wildlife Damage Management, Internet Center for at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in USGS Northern Prairie Wildlife Research Center by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. References Abrams, P. A. 2000. The evolution of predator-prey interactions. Adams, L. G., B. W. Dale, and L. D. Mech. 1995. Wolf predation on Annu. Rev. Ecol. Syst. 31:79-105. caribou calves in Denali National Park, Alaska. Pp. 245-60 Abuladze, K. I. 1964. Osnovy Tsestodologii. Vol. IV. Teniaty in L. N. Carbyn, S. H. Fritts, and D. R. Seip, eds., Ecology lentochnye gel' minty zhivotnykh i cheloveka i vyzyvaevaniia. and conservation of wolves in a changing world. Canadian Nauka, Moscow. 530 pp. Circumpolar Institute, Edmonton, Alberta. Achuff, P. L., and R. Petocz. 1988. Preliminary resource inventory Adams, L. G., F. G. Singer, and B. W. -
Speciation in Geographical Setting
Speciation Speciation 2019 2019 The degree of reproductive isolation Substantial variation exists in among geographical sets of species - anagenesis populations within an actively 1859 1859 evolving species complex is often Achillea - yarrow tested by crossing experiments — as in the tidy tips of California 100K bp 100K bp back in time back in time back Rubus parviforus K = 4 mean population assignment 2 mya 2 mya ID CO WI_Door 5 mya BC_Hixton BC_MtRob WI_BruleS 5 mya BC_McLeod CA_Klamath MI_Windigo WA_Cascade WA_BridgeCr SD_BlackHills OR_Willamette MI_Drummond Speciation Speciation 2019 Reproductive isolation will ultimately stop all Although simple in concept, the recognition of species and thus the definition genetic connections among sets of populations of what are species have been controversial — more than likely due to the – cladogenesis or speciation continuum nature of the pattern resulting from the process of speciation 1859 Example: mechanical isolation via floral shape changes and pollinators between two parapatric species of California Salvia (sage) 100K bp back in time back 2 mya S. mellifera 5 mya Salvia apiana 1 Speciation Speciation Although simple in concept, the recognition of species and thus the definition Animal examples of speciation often show of what are species have been controversial — more than likely due to the clear reproductive barriers - hence zoologists continuum nature of the pattern resulting from the process of speciation preference (as opposed to botanists) for the Reproductive isolating Biological