Explaining Patterns in Abundance of Juvenile Fish Using Caribbean
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Reef Fish Biodiversity in the Florida Keys National Marine Sanctuary Megan E
University of South Florida Scholar Commons Graduate Theses and Dissertations Graduate School November 2017 Reef Fish Biodiversity in the Florida Keys National Marine Sanctuary Megan E. Hepner University of South Florida, [email protected] Follow this and additional works at: https://scholarcommons.usf.edu/etd Part of the Biology Commons, Ecology and Evolutionary Biology Commons, and the Other Oceanography and Atmospheric Sciences and Meteorology Commons Scholar Commons Citation Hepner, Megan E., "Reef Fish Biodiversity in the Florida Keys National Marine Sanctuary" (2017). Graduate Theses and Dissertations. https://scholarcommons.usf.edu/etd/7408 This Thesis is brought to you for free and open access by the Graduate School at Scholar Commons. It has been accepted for inclusion in Graduate Theses and Dissertations by an authorized administrator of Scholar Commons. For more information, please contact [email protected]. Reef Fish Biodiversity in the Florida Keys National Marine Sanctuary by Megan E. Hepner A thesis submitted in partial fulfillment of the requirements for the degree of Master of Science Marine Science with a concentration in Marine Resource Assessment College of Marine Science University of South Florida Major Professor: Frank Muller-Karger, Ph.D. Christopher Stallings, Ph.D. Steve Gittings, Ph.D. Date of Approval: October 31st, 2017 Keywords: Species richness, biodiversity, functional diversity, species traits Copyright © 2017, Megan E. Hepner ACKNOWLEDGMENTS I am indebted to my major advisor, Dr. Frank Muller-Karger, who provided opportunities for me to strengthen my skills as a researcher on research cruises, dive surveys, and in the laboratory, and as a communicator through oral and presentations at conferences, and for encouraging my participation as a full team member in various meetings of the Marine Biodiversity Observation Network (MBON) and other science meetings. -
The Role of Threespot Damselfish (Stegastes Planifrons)
THE ROLE OF THREESPOT DAMSELFISH (STEGASTES PLANIFRONS) AS A KEYSTONE SPECIES IN A BAHAMIAN PATCH REEF A thesis presented to the faculty of the College of Arts and Sciences of Ohio University In partial fulfillment of the requirements for the degree Masters of Science Brooke A. Axline-Minotti August 2003 This thesis entitled THE ROLE OF THREESPOT DAMSELFISH (STEGASTES PLANIFRONS) AS A KEYSTONE SPECIES IN A BAHAMIAN PATCH REEF BY BROOKE A. AXLINE-MINOTTI has been approved for the Program of Environmental Studies and the College of Arts and Sciences by Molly R. Morris Associate Professor of Biological Sciences Leslie A. Flemming Dean, College of Arts and Sciences Axline-Minotti, Brooke A. M.S. August 2003. Environmental Studies The Role of Threespot Damselfish (Stegastes planifrons) as a Keystone Species in a Bahamian Patch Reef. (76 pp.) Director of Thesis: Molly R. Morris Abstract The purpose of this research is to identify the role of the threespot damselfish (Stegastes planifrons) as a keystone species. Measurements from four functional groups (algae, coral, fish, and a combined group of slow and sessile organisms) were made in various territories ranging from zero to three damselfish. Within territories containing damselfish, attack rates from the damselfish were also counted. Measures of both aggressive behavior and density of threespot damselfish were correlated with components of biodiversity in three of the four functional groups, suggesting that damselfish play an important role as a keystone species in this community. While damselfish density and measures of aggression were correlated, in some cases only density was correlated with a functional group, suggesting that damselfish influence their community through mechanisms other than behavior. -
Sharkcam Fishes
SharkCam Fishes A Guide to Nekton at Frying Pan Tower By Erin J. Burge, Christopher E. O’Brien, and jon-newbie 1 Table of Contents Identification Images Species Profiles Additional Information Index Trevor Mendelow, designer of SharkCam, on August 31, 2014, the day of the original SharkCam installation SharkCam Fishes. A Guide to Nekton at Frying Pan Tower. 4th edition by Erin J. Burge, Christopher E. O’Brien, and jon-newbie is licensed under the Creative Commons Attribution-Noncommercial 4.0 International License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc/4.0/. For questions related to this guide or its usage contact Erin Burge. The suggested citation for this guide is: Burge EJ, CE O’Brien and jon-newbie. 2019. SharkCam Fishes. A Guide to Nekton at Frying Pan Tower. 4th edition. Los Angeles: Explore.org Ocean Frontiers. 194 pp. Available online http://explore.org/live-cams/player/shark-cam. Guide version 4.0. 5 January 2019. 2 Table of Contents Identification Images Species Profiles Additional Information Index TABLE OF CONTENTS FOREWORD AND INTRODUCTION.................................................................................. 9 IDENTIFICATION IMAGES .......................................................................................... 12 Sharks and Rays ................................................................................................................................... 12 Table: Relative frequency of occurrence and relative size .................................................................... -
Progress Report Summarizing the Reef Fish Sampling, PCB Analysis Results
Progress report summarizing the reef fish sampling, PCB analysis results and visual monitoring associated with the Oriskany Reef, a decommissioned former Navy aircraft carrier sunk in 2006 as an artificial reef in the Northeastern Gulf of Mexico off Pensacola, Florida Prepared by: Jon Dodrill, Keith Mille, and Bill Horn Florida Fish and Wildlife Conservation Commission Florida Artificial Reef Program Division of Marine Fisheries Management 620 S. Meridian Street Tallahassee, FL 32399 and Robert Turpin Escambia County Marine Resources Division 3363 West Park Place Pensacola, FL 32505 Submitted April 13, 2011 TABLE OF CONTENTS Page No. Executive Summary ............................................................................................................. 3 List of Tables ........................................................................................................................ 4 List of Figures ....................................................................................................................... 5 Part I. EPA Monitoring Requirements, Oriskany Reef Project Historical Background, and Methodology for Field Sampling and Sample PCB Analysis Methodology (A) Introduction ........................................................................................................ 6 (B) Overview of PCBs .............................................................................................. 10 (C) Oriskany Reef Project Background History ...................................................... 13 (D) Materials -
Martin County Artificial Reef Monitoring 2016-17 FINAL
Martin County Artificial Reef Monitoring 2016-17 FINAL REPORT FWC Grant No. 15106 September 2017 Prepared for: Florida Fish and Wildlife Conservation Commission 620 South Meridian Street Tallahassee, FL 32399 Prepared by: Coastal Eco-Group, Inc. 665 SE 10th St. Suite 104 Deerfield Beach, FL 33441 Phone: 954-591-1219 Recommended citation: O’Neil, K., C. Miller and D. Fisco. 2017. Martin County Artificial Reef Monitoring 2016- 17. Florida Fish and Wildlife Conservation Commission Grant No. 15106. Report prepared by Coastal Eco-Group, Inc. 71 pp. plus appendices. Table of Contents 1.0 INTRODUCTION ........................................................................................................... 1 2.0 METHODS ................................................................................................................... 7 2.1 Survey Locations ............................................................................................................... 7 2.1.1 South County Artificial Reefs .................................................................................... 7 2.1.2 Natural Reef Sites ..................................................................................................... 8 2.1.3 Comparisons to Prior Studies.................................................................................... 8 2.2 Experimental Design ........................................................................................................ 9 2.3 Benthic Quadrat Assessments ...................................................................................... -
The Role of the Threespot Damselfish, Stegastes Planifrons, in Contemporary Caribbean Reef Ecology
The Role of the threespot damselfish, Stegastes planifrons, in Contemporary Caribbean Reef Ecology Submitted by Ellen Husain, to the University of Exeter as a thesis for the degree of Doctor of Philosophy in Biological Sciences, September 2011. This thesis is available for library use on the understanding that it is copyright material and that no quotation from the thesis may be published without proper acknowledgement. I certify that all material in this thesis which is not my own work has been identified and that no material has previously been submitted and approved for the award of a degree by this or any other university. Signed: ....... ................................................ 1 2 3 4 Abstract Caribbean reef ecosystems have undergone major ecological changes in the last 30 – 40 years, with the result that ecological systems once dominated by structurally complex Acropora cervicornis and Montastraea annularis corals now consist mainly of flattened carbonate substrates with macroalgal overgrowth. A need for greater understanding of coral reef ecosystems is imperative if we are to attempt to conserve them. The threespot damselfish, Stegastes planifrons, is herbivorous damselfish species ubiquitous to Caribbean reefs, where it has been termed a keystone species. Aggressive in nature, S. planifrons defends territories of around 70 cm in diameter from other roving herbivorous fish and urchins, in apparent effort to maintain the algal resources therein for its own use. The predilection of Stegastes planifrons for basing its territories on the now Critically Endangered staghorn coral, Acropora cervicornis, and the Endangered boulder coral Montastraea annularis is well known, however the likely ecological implications of this fact have not been investigated. -
Coral-Reef Fishes: Insights Into Larval Dispersal and Invasion Ecology
AN ABSTRACT OF THE DISSERTATION OF Timothy J. Pusack for the degree of Doctor of Philosophy in Zoology presented on May 24, 2013. Title: Coral-Reef Fishes: Insights Into Larval Dispersal and Invasion Ecology Abstract approved: Mark A. Hixon Because many coral-reef fishes are observable in situ, are amenable to transplantation, have small home ranges and short generation times, they provide a excellent system to investigate many topics within general ecology, fisheries biology, and conservation biology. The primary goal of this dissertation was to use the coral-reef fishes system to investigate two pressing sets of issues that face marine ecologists and managers of living marine resources. The first topic is the spatial and temporal patterns of larval dispersal and reproductive success in a marine metapopulation (Chapter 2). Because miniscule larvae are difficult to track in the vast pelagic environment, little is known about the patterns of larval dispersal. Yet, the more that is understood about the spatial and temporal variability in larval dispersal, the easier it will be to identify sites that are self-sustaining and exporting larvae to unprotect sites, a common goal of marine reserves. Incorporating this information into siting of marine reserves will improve their effectiveness. The second topic is fundamental in the ecology of biological invasions: species specific interactions between an invasive predator and native species. Specifically, I investigated the ability of an invasive predator to disrupt natural population regulation of a native prey species (Chapter 3), and the ability of a native predator to provide biotic resistance against the invasive species (Chapter 4). -
POMACENTRIDAE Damselfishes by J.A
click for previous page 1694 Bony Fishes POMACENTRIDAE Damselfishes by J.A. Carter, University of New England, Maine, USA and L. Kaufman, Boston University, Massachusetts, USA iagnostic characters: Small fishes, 35 cm maximum, usually less than 15 cm.Most are deep-bodied and Dlaterally compressed, with a small mouth and moderately to highly protrusible jaws. Teeth in buccal jaws conical, incisiform or brush-like, but never molar-like or fang-like. A single pair of nostrils in Atlantic species;preorbital and usually suborbitals not attached to cheek;gill rakers small, rarely more numerous than 35 to 40 on first arch; lower pharyngeals (tooth-bearing fifth ceratobranchials) completely fused into a plate. Dorsal fin with 10 to 14 spines (usually 12 or 13); anal fin always with 2 spines. Scales ctenoid (rough to touch) in Atlantic species, fewer than 30 in a longitudinal row from behind gill cover to base of caudal fin.Lateral line with tube-bearing scales extending to below end of dorsal fin, then continuing as a row of tiny pits to middle of caudal-fin base. Colour: many damselfishes are brightly coloured; adults are often less brilliant but more behaviourally labile than juveniles and frequently there is a gradual transition from a specific juvenile colour pattern to a different adult pattern;temporary spawning coloration can be assumed or discarded in seconds. single nostril mouth small 2 spines in anal fin Habitat, biology, and fisheries: Most species of damselfish are restricted to shallow coral reefs at depths less than 15 m; a few species enter lagoons, estuaries, and the lower reaches of fresh water streams (Stegastes otophorus). -
Diversity and Distribution of Fishes Along the Depth Gradient of a Coral Reef Wall at San Andrés Island, Colombian Caribbean
Bol. Invest. Mar. Cost. 45 (1) 15-39 ISSN 0122-9761 Santa Marta, Colombia, 2016 DIVERSITY AND DISTRIBUTION OF FISHES ALONG THE DEPTH GRADIENT OF A CORAL REEF WALL AT SAN ANDRÉS ISLAND, COLOMBIAN CARIBBEAN Karen Melissa Serna Rodríguez1, Fernando A. Zapata1 y Luz Marina Mejía-Ladino2,3 1 Universidad del Valle, Departamento de Biología, Grupo de Investigación en Ecología de Arrecifes Coralinos, Apartado aéreo 25360, Cali, Colombia. [email protected], fernando. [email protected] 2 Instituto de Investigaciones Marinas y Costeras (Invemar), Sede Pacífico, Vía Cali-Palmira, Palmira, Colombia. 3 Present address: Av. Santander No. 44-47, Apto 1302, Cartagena, Colombia. [email protected] ABSTRACT “Blue Wall”, in San Andrés Island (Colombia), is an outer reef slope with an inclination that increases with depth to nearly 90°. Such a steep gradient facilitates the identification of patterns of variation in species abundance and diversity along depth. To document such patterns in fishes associated with this habitat, 30 visual censuses were conducted along 30 x 2 m transects, located at 5 m intervals between 5-30 m depth, in which the abundance and diversity of species was estimated. A total of 2916 individuals belonging to 46 species from 21 families were recorded within transects. Ten additional species were observed outside of transects for a total richness of 56 species. The dominant species were Canthigaster rostrata, Chromis cyanea, Stegastes partitus, Thalassoma bifasciatum and Clepticus parrae, which together with four other species accounted for 92% of the total abundance. Several of these dominant species are planktivorous and abundant throughout the Caribbean and had broad ranges of vertical distribution with abundance peaks in different parts of the depth gradient. -
Workshop on Biological Integrity of Coral Reefs
EPA/600/R-13/350 | December 2014 www.epa.gov/ord Workshop on Biological Integrity of Coral Reefs Caribbean Coral Reef Institute Isla Magueyes, La Parguera, Puerto Rico August 21-22, 2012 Office of Research and Development National Health and Environmental Effects Research LaboratoryLaboratory, Atlantic Ecology Division EPA/600/R-13/350 December 2014 www.epa.gov/ord Workshop on Biological Integrity of Coral Reefs August 21-22, 2012 Caribbean Coral Reef Institute Isla Magueyes, La Parguera, Puerto Rico by Patricia Bradley Deborah L. Santavy Jeroen Gerritsen US EPA US EPA Tetra Tech Inc. Atlantic Ecology Division Gulf Ecology Division 400 Red Brook Boulevard NHEERL, ORD NHEERL, ORD Suite 200 33 East Quay Road 1 Sabine Island Drive Owings Mills, MD 21117 Key West, FL 33040 Gulf Breeze, FL 32561 Contract No. EP-C-09-001 Work Assignment 3-01 Great Lakes Environmental Center, Inc. Project Officer: Work Assignment Manager: Shirley Harrison Susan K. Jackson US EPA US EPA Office of Water Office of Water Office of Science and Technology Office of Science and Technology Washington, DC 20460 Washington, DC 20460 National Health and Environmental Effects Research Laboratory Office of Research and Development Washington, DC 20460 Printed on chlorine free 100% recycled paper with 50% post-consumer fiber using vegetable-based ink. Notice and Disclaimer The US Environmental Protection Agency (EPA) through its Office of Research and Development and Office of Water funded and collaborated in the research described here under EP-C-09-001, Work Assignment #3-01, to Great Lakes Environmental Center, Inc. It has been subjected to the Agency’s peer and administrative review and has been approved for publication as an EPA document. -
Mangrove and Seagrass Identification
Mangrove and Seagrass Identification Chlorophyta – Green Algae Most commonly obsereved algae on coral reefs Some are calcareous – they add significant amounts of calcium carbonate to the reefs The main pigment is Chlorophyll Rhipocephalus Pinecone Algae Tightly packed flatteren blades growing upwards concentrating from a single stalk Udotea Mermaid’s fan Broad fan shaped blades on single stalks Calcareous Lines radiating from the base to the edge Caulerpa Feather, blade and grape algae Grow on runners Penicillis Shaving brush algae Cone shaped. Similar to Rhipocephalus but with needles instead of blades. Halimeda sp. Watercress and lettuce leaf algae Disk shaped calcified segments – stiff Ventricaria sp. Sea Pearl Dark green spheres with a bright reflective sheen. Attaches to substrate by fine hair like runners One of the largest single cells found in the animal knigdom Phaeophyta – Brown Algae Get color from brown pigment called fucoxanthin Dictyota sp. Y-Branched algae Brown/green Branches fork at ends into a y-shape Leaves are flat, tips may be pointed or flat Padina sp. White Scroll Algae Large dense clumps of leafy blades with rounder outer margins. White to light brown in color. Looks like pencil shavings. Sargassum sp. Sargassum Seaweed Often floats on surface – providing home for many sea creatures on the open oceans Air filled sacs like small grapes Turbinaria sp. Turbina sp. Trangular coneshaped blades with saucer like tips trumpet shaped Rhodophyta – Red Algae Most diversified algae with more than 4000 tropical species Many of the calcerous species are important in the building of reefs Neogoniolithon sp. Chineese Noodle Algae red, calcareous algal –crunchy when you step on it (Also painful – please wear shoes!) Laurencia sp. -
Fishing Down a Caribbean Food Web Relaxes Trophic Cascades
Vol. 445: 13–24, 2012 MARINE ECOLOGY PROGRESS SERIES Published January 20 doi: 10.3354/meps09450 Mar Ecol Prog Ser Fishing down a Caribbean food web relaxes trophic cascades Peter J. Mumby1,*, Robert S. Steneck2, Alasdair J. Edwards3, Renata Ferrari1, Robin Coleman4, Alastair R. Harborne1,5, Janet P. Gibson4 1Marine Spatial Ecology Lab, School of Biological Sciences & ARC Centre of Excellence for Coral Reef Studies, Goddard Building, University of Queensland, St. Lucia Campus, Brisbane, Queensland 4072, Australia 2School of Marine Sciences, University of Maine, Darling Marine Center, Walpole, Maine 04573, USA 3School of Biology, Newcastle University, Ridley Bldg, Newcastle upon Tyne NE1 7RU, UK 4Wildlife Conservation Society, PO Box 768, 1755 Coney Drive, 2nd Floor, Belize City, Belize 5Marine Spatial Ecology Lab, College of Life and Environmental Sciences, University of Exeter, Exeter EX4 4PS, UK ABSTRACT: The fishing down of marine food webs has been described in pelagic and demersal sys- tems but rarely documented in coral reef environments. We recorded a rapid shift in fish community structure in Belize that accompanied a marked decline in grouper and snapper abundance and a switch towards smaller, less desirable, herbivorous parrotfishes. In a 6 to 7 yr period (2002–2008/09), observations of large-bodied grouper (Serranidae) declined significantly from an encounter proba- bility of 21% per 200 m2 transect to just 2%. The biomass of carnivorous snappers (Lutjanidae) underwent a 7-fold decline, primarily in the species Ocyurus chrysurus. During this period, the inclusion of parrotfish in fish catches at nearby Glover’s Atoll increased from a frequency of 6% in 2004 to ~20% of speared individuals by 2008.