Publications of Sebastian Seung

V. Jain, H. S. Seung, and S. C. Turaga. Machines that learn to segment images: a crucial technology for . (pdf) Curr. Opin. Neurobiol (2010). V. Jain, B. Bollmann, M. Richardson, D. Berger et al. Boundary learning by optimization with topological constraints. (pdf supplementary info) Proceedings of the IEEE 23rd Conference on and Pattern Recognition (2010). I. R. Wickersham, H. A. Sullivan, and H. S. Seung. Production of glycoprotein-deleted rabies viruses for monosynaptic tracing and high-level gene expression in neurons. (pdf) Nature Protocols. 5, 596-606 (2010). S. C. Turaga, J. F. Murray, V. Jain, F. Roth, M. Helmstaedter, K. Briggman, W. Denk, and H. S. Seung. Convolutional networks can learn to generate affinity graphs for image segmentation. (pdf) Neural Computation 22, 511-538 (2010). S. C. Turaga, K. L. Briggman, M. Helmstaedter, W. Denk, and H. S. Seung. Maximin affinity learning of image segmentation. (pdf) Adv. Neural Info. Proc. Syst. 22 (Proceedings of NIPS '09) (2010). J. Wang, M. T. Hasan, and H. S. Seung. Laser-evoked synaptic transmission in cultured hippocampal neurons expressing Channelrhodopsin-2 delivered by adeno-associated virus.(pdf) J. Neurosci. Methods 183, 165-175 (2009). Y. Loewenstein, D. Prelec, and H. S. Seung. Operant matching as a Nash equilibrium of an intertemporal game. (pdf) Neural Computation 21, 2755-2773 (2009). H. S. Seung. Reading the Book of Memory: Sparse Sampling versus Dense Mapping of . (pdf) Neuron 62, 17-29 (2009). V. Jain and H. S. Seung. Natural Image Denoising with Convolutional Networks (pdf) Adv. Neural Info. Proc. Syst. 21 (Proceedings of NIPS '08) 769-776 (2009). V. Jain, J. F. Murray, F. Roth, S. Turaga, V. Zhigulin, K. L. Briggman, M. N. Helmstaedter, W. Denk, and H. S. Seung. Supervised Learning of Image Restoration with Convolutional Networks.(pdf) Proceedings: IEEE 11th International Conference on Computer Vision (ICCV) (2007) C. Fang-Yen, M. C. Chu, H. S. Seung, R. R. Dasari, and M. S. Feld. Phase-referenced probe interferometer for biological surface profiling and displacement measurements.(pdf) Rev. Sci. Instrum. 78, 123703 (2007). I. R. Fiete, M. S. Fee, and H. S. Seung. Model of birdsong learning based on gradient estimation by dynamic perturbation of neural conductances.(pdf) J. Neurophysiol. 98, 2038-57 (2007). C. Fang-Yen, S. Oh, Y. Park, W. Choi, S. Song, H. S. Seung, R. R. Dasari, and M. S. Feld. Imaging voltage-dependent cell motions with heterodyne Mach-Zehnder phase microscopy. Opt. Lett. 32, 1572-4 (2007). U. Rokni, A. G. Richardson, E. Bizzi, and H. S. Seung. Motor learning with unstable neural representations.(pdf) Neuron 54, 65366 (2007). D. Z. Jin, F. M. Ramazanoglu, and H. S. Seung. Intrinsic bursting enhances the robustness of a neural network model of sequence generation by avian brain area HVC.(pdf) J. Comput. Neurosci. 23, 283-299 (2007; Epub 2007 Apr 18). Y. Loewenstein and H. S. Seung. Operant matching is a generic outcome of synaptic plasticity based on the covariance between reward and neural activity. (pdf) Proc. Natl. Acad. Sci. USA 103, 15224-15229 (2006). I. R. Fiete and H. S. Seung. Gradient learning in spiking neural networks by dynamic perturbation of conductances. (pdf) Phys. Rev. Lett. 97, 048104 (2006). V. Jain, V. Zhigulin, and H. S. Seung. Representing part-whole relationships in recurrent neural networks. (pdf) Adv. Neural Info. Proc. Syst. 18, 563--70 (2006). G. S. Corrado, L. P. Sugrue, H. S. Seung, and W. T. Newsome. Linear-nonlinear-Poisson models of primate choice dynamics. (pdf) J. Exp. Anal. Behav. 84, 581-617 (2005). D. Z. Jin, V. Dragoi, M. Sur, and H. S. Seung. Tilt aftereffect and adaptation-induced changes in orientation tuning in visual cortex. (pdf) J. Neurophysiol. 94, 4038-4050 (2005). R. Tedrake, T. W. Zhang, and H. S. Seung. Learning to Walk in 20 Minutes. (pdf) In Proceedings of the Fourteenth Yale Workshop on Adaptive and Learning Systems, Yale University, New Haven, CT, 2005. J. Werfel, X. Xie, and H. S. Seung. Learning curves for stochastic gradient descent in linear feedforward networks. (pdf) Neural Comput. 17, 2699-2718 (2005). Earlier version: J. Werfel, X. Xie, and H. S. Seung. Learning curves for stochastic gradient descent in linear feedforward networks. (pdf) Adv. Neural Info. Proc. Syst. 16 (2004). A. Starovoytov, J. Choi, and H. S. Seung. Light-directed electrical stimulation of neurons cultured on silicon wafers. (pdf) J. Neurophysiol. 93, 1090-1098 (2005; Epub 2004 Sep 22). C. Fang-Yen, M. C. Chu, H. S. Seung, R. R. Dasari, and M. S. Feld. Noncontact measurement of nerve displacement during action potential with a dual-beam low-coherence interferometer. (pdf) Opt. Lett. 29, 2028-2030 (2004). B. D. Mensh, J. Werfel, and H. S. Seung. BCI Competition 2003 - Data set Ia: combining gamma- band power with slow cortical potentials to improve single-trial classification of electroencephalographic signals. (pdf) IEEE Trans. Biomed. Eng. 51, 1052-1056 (2004). I. R. Fiete, R. H. R. Hahnloser, M. S. Fee, and H. S. Seung. Temporal sparseness of the premotor drive is important for rapid learning in a neural network model of birdsong. (pdf) J. Neurophysiol. 92, 2274-2282 (2004). G. Major, R. Baker, E. Aksay, H. S. Seung, and D. W. Tank. Plasticity and tuning of the time course of analog persistent firing in a neural integrator. (pdf) Proc. Natl. Acad. Sci. USA 101, 7745-7750 (2004). G. Major, R. Baker, E. Aksay, B. Mensh, H. S. Seung, and D. W. Tank. Plasticity and tuning by visual feedback of the stability of a neural integrator. (pdf) Proc. Natl. Acad. Sci. 101, 7739-7744 (2004). X. Xie and H. S. Seung. Learning in neural networks by reinforcement of irregular spiking. (pdf) Phys. Rev. E69, 041909 (2004). B. D. Mensh, E. Aksay, D. D. Lee, H. S. Seung, and D. W. Tank. Spontaneous eye movements in goldfish: Oculomotor integrator performance, plasticity, and dependence on visual feedback. (pdf) Vision Res. 44, 711-726 (2004). R. Tedrake, T. W. Zhang, and H. S. Seung. Stochastic Policy Gradient Reinforcement Learning on a Simple 3D Biped. (pdf) In Proceedings of the IEEE International Conference on Intelligent Robots and Systems (IROS), pages 2849-2854, Sendai, Japan, September 2004. R. Tedrake, T. W. Zhang, M.-F. Fong, and H. S. Seung. Actuating a Simple 3D Passive Dynamic Walker. (pdf) In Proceedings of the IEEE International Conference on Robotics and Automation (ICRA), volume 5, pages 4656-4661, New Orleans, LA, April 2004. H. S. Seung. Learning in spiking neural networks by reinforcement of stochastic synaptic transmission. (pdf) Neuron 40, 1063-1073 (2003). E. Aksay, R. Baker, H. S. Seung, and D. W. Tank. Correlated discharge among cell pairs within the oculomotor horizontal velocity-to-position integrator. (pdf) J. 23, 10852-10858 (2003). M. S. Goldman, J. H. Levine, G. Major, D. W. Tank, and H. S. Seung. Robust Persistent Neural Activity in a Model Integrator with Multiple Hysteretic Dendrites per Neuron. (pdf) Cerebral Cortex 13, 1185-1195 (2003). E. Aksay, G. Major, M. S. Goldman, R. Baker, H. S. Seung, and D. W. Tank. History dependence of rate covariation between neurons during persistent activity in an oculomotor integrator. (pdf) Cerebral Cortex 13, 1173-1184 (2003). H. S. Seung. Amplification, Attenuation, and Integration (pdf) in The Handbook of Brain Theory and Neural Networks: Second Edition (M. A. Arbib, Editor) Cambridge, MA: MIT Press, pp. 94-97 (2003). R. H. R. Hahnloser, H. S. Seung, and J. J. Slotine. Permitted and forbidden sets in symmetric threshold-linear networks. (pdf) Neural Comput. 15, 621-38 (2003). Earlier version: R. H. R. Hahnloser, H. S. Seung. Permitted and Forbidden Sets in Symmetric Threshold Linear Networks. (pdf) Adv. Neural Info. Proc. Syst. 13, 217-223 (2001). X. Xie and H. S. Seung. Equivalence of backpropagation and contrastive Hebbian learning in a layered network. (pdf) Neural Comput. 15, 441-54 (2003). X. Xie, R. H. R. Hahnloser, and H. S. Seung. Double-ring network modeling of the head-direction system (pdf) Phys. Rev. E66, 041902 (2002). X. Xie, R. H. R. Hahnloser, and H. S. Seung. Selectively grouping neurons in recurrent networks of lateral inhibition. (pdf) Neural Comput. 14, 2627-46 (2002). Earlier version: X.-H. Xie, R. Hahnloser and H. S. Seung. Learning winner-take-all competition between groups of neurons in lateral inhibitory networks (pdf) Adv. Neural Info. Proc. Syst. 13, 350-356 (2001). M. S. Goldman, C. R. Kaneko, G. Major, E. Aksay, D. W. Tank, and H. S. Seung. Linear regression of eye velocity on eye position and head velocity suggests a common oculomotor neural integrator. (pdf) J. Neurophysiol. 88, 659-65 (2002). D. Z. Jin and H. S. Seung. Fast computation with spikes in a recurrent neural network. (pdf) Phys. Rev. E65, 051922 (2002). R. Tedrake and H. S. Seung. Improved Dynamic Stability using Reinforcement Learning. (pdf) In 5th International Conference on Climbing and Walking Robots and the Support Technologies for Mobile Machines (CLAWAR), pages 341-348, Paris, France, September 2002. E. Aksay, G. Gamkrelidze, H. S. Seung, R. Baker, and D. W. Tank. In vivo intracellular recording and perturbation of persistent activity in a neural integrator (pdf) Nature Neurosci. 4, 184- 93 (2001). D. D. Lee and H. S. Seung. Algorithms for non-negative matrix factorization. (pdf) Adv. Neural Info. Proc. Syst. 13, 556-562 (2001). H. S. Seung and D.D. Lee. The Manifold ways of perception. (pdf) Science 290, 2268-69 (2000). H. S. Seung. Half a century of Hebb. (pdf) Nature Neurosci. 3, 1166-67 (2000). R. H. R. Hahnloser, R. Sarpeshkar, M. A. Mahowald, R. J. Douglas, and H. S. Seung. Digital selection and analogue amplification coexist in a cortex-inspired silicon circuit. (pdf) Nature 405, 947-51 (2000). C. Dioro and R. P.N. Rao. Neural Circuits in Silicon (pdf), News and Views, Nature, 405, 891-2 (2000). X.-H. Xie and H. S. Seung. Spike-based learning rules and stabilization of persistent neural activity. (pdf) Adv. Neural Info. Proc. Syst. 12, 199-205 (2000). E. Aksay, R. Baker, H. S. Seung, and D. W. Tank. Anatomy and Discharge Properties of Pre- Motor Neurons in the Goldfish Medulla That Have Eye-Position Signals During Fixations. (pdf) J. Neurophysiol. 84, 1035-49 (2000). H. S. Seung, D. D. Lee, B. Y. Reis, D. W. Tank. Stability of the Memory of Eye Position in a Recurrent Network of Conductance-Based Model Neurons. (pdf) Neuron 26, 259-271 (2000). H. S. Seung, D. D. Lee, B. Y. Reis, D. W. Tank. The autapse: a simple illustration of short-term analog memory storage by tuned synaptic feedback. J. Comput. Neurosci. 9:171-85 (pdf) (2000). D. D. Lee and H. S. Seung. Learning the parts of objects by non-negative matrix factorization. (pdf) Nature 401, 788-791 (1999). B. W. Mel. Computational neuroscience: Think positive to find parts (pdf), News and Views, Nature, 401, 759-760 (1999). A. Gelperin, J. L. Dawson, S. M. Cazares. and H. S. Seung. Rapid fruit cultivar identification by an artificial olfactory system. Proceedings of the 5th International Symposium on Olfaction and the Electronic Nose. 263-74 (1998). D. D. Lee and H. S. Seung. Learning in intelligent embedded systems. (pdf) H. S. Seung. Continuous attractors and oculomotor control. (pdf) Neural Netw. 11, 1253-58 (1998). H. S. Seung. Learning continuous attractors in recurrent networks.(pdf) Adv. Neural Info. Proc. Syst. 10, 654-60 (1998). H. S. Seung, T. J. Richardson, J. C. Lagarias, and J. J. Hopfield. Minimax and Hamiltonian dynamics of excitatory-inhibitory networks.(pdf) Adv. Neural Info. Proc. Syst.10, 329-35 (1998). D. D. Lee and H. S. Seung. A neural network based head tracking system. (pdf) Adv. Neural Info. Proc. Syst.10, 908-14 (1998). J.-H. Oh and H. S. Seung. Learning generative models with the up-propagation algorithm. (pdf) Adv. Neural Info. Proc. Syst. 10, 605-11 (1998). N. D. Socci, D. D. Lee, and H. S. Seung. The rectified Gaussian distribution. (pdf) Adv. Neural Info. Proc. Syst.10, 350-6(1998). H. S. Seung. Pattern analysis and synthesis in attractor neural networks. (pdf) In Theoretical Aspects of Neural Computation: A Multidisciplinary Perspective, Proceedings of TANC'97. Springer-Verlag (1997). Y. Freund, H. S. Seung, E. Shamir, and N. Tishby. Selective sampling using the Query by Committee algorithm (pdf) 28, 133-168 (1997). Earlier version: Information, prediction, and query by committee. Adv. Neural Info. Proc. Syst. 5, 483-490 (1993). D. D. Lee, B. Y. Reis, H. S. Seung, and D. W. Tank. Nonlinear network models of the oculomotor integrator. (pdf). In Computational Neuroscience: Trends in Research 1997. New York, Plenum Press. P. Riegler and H. S. Seung. Vapnik-Chervonenkis entropy of the spherical perceptron. (pdf) Phys. Rev. E55, 3283-7 (1997). D. D. Lee and H. S. Seung. Unsupervised learning by convex and conic coding. (pdf) Adv. Neural Info. Proc. Syst. 9, 515-521 (1997). H. S. Seung. How the brain keeps the eyes still. (pdf) Proc. Natl. Acad. Sci. USA 93, 13339-44 (1996). D. Haussler, M. J. Kearns, H. S. Seung, and N. Tishby. Rigorous learning curve bounds from (pdf) Machine Learning 25, 195-236 (1996) and Proceedings of the Seventh Annual ACM Workshop on Computational Learning Theory, 76-87 (1994). H. S. Seung. Annealed theories of learning. (pdf) In Neural Networks: The Statistical Mechanics Perspective, Proceedings of the CTP-PBSRI Joint Workshop on Theoretical , World Scientific, 32-41 (1995). H. Sompolinsky, N. Barkai, and H. S. Seung. On-line learning of dichotomies: algorithms and learning curves. In Neural Networks: The Statistical Mechanics Perspective, Proceedings of the CTP-PBSRI Joint Workshop on Theoretical Physics, World Scientific, 105-130 (1995). N. Barkai, H. S. Seung, and H. Sompolinsky. Local and global convergence of on-line learning. Phys. Rev. Lett. 75, 1415-18 (1995). N. Barkai, H. S. Seung, and H. Sompolinsky. On-line learning of dichotomies. (pdf) Adv. Neural Info. Proc. Syst. 7, 303-310 (1995). M. Kearns and H. S. Seung. Learning from a population of hypotheses. (pdf) Machine Learning 18, 255-276 (1995) and Proceedings of the Sixth Annual Workshop on Computational Learning Theory, 101-110 (1993). N. Barkai, H. S. Seung, and H. Sompolinsky. Scaling laws in learning of classification tasks. Phys. Rev. Lett. 70, 3167-70 (1993). H. S. Seung and H. Sompolinsky. Simple models for reading neuronal population codes. Proc. Natl. Acad. Sci. USA 90, 10749-53 (1993). A. Borst, M. Egelhaaf, and H. S. Seung. Two-dimensional motion perception in flies. Neural Comput. 5, 856-868 (1993). H. S. Seung, M. Opper, and H. Sompolinsky. Query by committee. (pdf) In Proceedings of the Fifth Annual ACM Workshop on Computational Learning Theory, 287-94 (1992). H. S. Seung, H. Sompolinsky, and N. Tishby. Statistical mechanics of learning from examples. Phys. Rev. A45, 6056-91 (1992). Earlier version: Learning curves in large neural networks. Proceedings of the Fourth Annual ACM Workshop on Computational Learning Theory. 112-126 (1991). H. Sompolinsky, N. Tishby, and H. S. Seung. Learning from examples in large neural networks. Phys. Rev. Letters 65, 1683-6 (1990). D. A. Huse and H. S. Seung. Possible vortex-glass transition in a model random superconductor. Phys. Rev. B42, 1059-61 (1990). D. R. Nelson and H. S. Seung. Theory of melted flux liquids. Phys. Rev. B39, 9153-74 (1989). H. S. Seung and D. R. Nelson. Defects in flexible membranes with crystalline order. Phys Rev. A38, 1005-18 (1988).