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How to Get Off the Mismatch at the Generic Rank in African Podostemaceae?
Plant Syst Evol (2009) 283:57–77 DOI 10.1007/s00606-009-0214-4 ORIGINAL ARTICLE How to get off the mismatch at the generic rank in African Podostemaceae? Mike Thiv Æ Jean-Paul Ghogue Æ Valentin Grob Æ Konrad Huber Æ Evelin Pfeifer Æ Rolf Rutishauser Received: 16 February 2009 / Accepted: 20 August 2009 / Published online: 10 September 2009 Ó Springer-Verlag 2009 Abstract The Podostemaceae are highly enigmatic plants taxa without stem scales but showing pollen as single which are restricted to submerged river-rock habitats. The grains, with Monandriella linearifolia being basal to this availability of new material of nine taxa from continental clade; (3) the Ledermanniella-Dyad clade including Djinga, Africa prompted this new study. Five species belonging to Dicraeanthus, and Ledermanniella species without stem the genera Dicraeanthus, Leiothylax, Letestuella, Macro- scales but with pollen dyads. To reduce the polyphyly of podiella, and Stonesia and another four species of the large Ledermanniella sensu lato (i.e. sensu C. Cusset) we propose genera Inversodicraea sensu stricto and Ledermanniella restricting Ledermanniella to the species of the former sensu stricto have been analysed for the first time. New subgenus Ledermanniella, resurrecting Monandriella as anatomical and developmental data are described and monotypic genus, and accepting the genus name Inverso- illustrated by use of microtome sections and scanning dicraea for members of Ledermanniella subg. Phyllosoma. electron microscopy. In parallel, phylogenetic analyses of all available sequence data of African Podostemaceae have Keywords African Podostemaceae Á Dicraeanthus Á been conducted using three plastid markers (matK, trnD- Inversodicraea Á Ledermanniella Á Leiothylax Á Letestuella Á trnT, rpoB-trnC). -
Systematics and Biogeography of the Clusioid Clade (Malpighiales) Brad R
Eastern Kentucky University Encompass Biological Sciences Faculty and Staff Research Biological Sciences January 2011 Systematics and Biogeography of the Clusioid Clade (Malpighiales) Brad R. Ruhfel Eastern Kentucky University, [email protected] Follow this and additional works at: http://encompass.eku.edu/bio_fsresearch Part of the Plant Biology Commons Recommended Citation Ruhfel, Brad R., "Systematics and Biogeography of the Clusioid Clade (Malpighiales)" (2011). Biological Sciences Faculty and Staff Research. Paper 3. http://encompass.eku.edu/bio_fsresearch/3 This is brought to you for free and open access by the Biological Sciences at Encompass. It has been accepted for inclusion in Biological Sciences Faculty and Staff Research by an authorized administrator of Encompass. For more information, please contact [email protected]. HARVARD UNIVERSITY Graduate School of Arts and Sciences DISSERTATION ACCEPTANCE CERTIFICATE The undersigned, appointed by the Department of Organismic and Evolutionary Biology have examined a dissertation entitled Systematics and biogeography of the clusioid clade (Malpighiales) presented by Brad R. Ruhfel candidate for the degree of Doctor of Philosophy and hereby certify that it is worthy of acceptance. Signature Typed name: Prof. Charles C. Davis Signature ( ^^^M^ *-^£<& Typed name: Profy^ndrew I^4*ooll Signature / / l^'^ i •*" Typed name: Signature Typed name Signature ^ft/V ^VC^L • Typed name: Prof. Peter Sfe^cnS* Date: 29 April 2011 Systematics and biogeography of the clusioid clade (Malpighiales) A dissertation presented by Brad R. Ruhfel to The Department of Organismic and Evolutionary Biology in partial fulfillment of the requirements for the degree of Doctor of Philosophy in the subject of Biology Harvard University Cambridge, Massachusetts May 2011 UMI Number: 3462126 All rights reserved INFORMATION TO ALL USERS The quality of this reproduction is dependent upon the quality of the copy submitted. -
An Analysis of Species Conservation Action Plans in Guinea
bioRxiv preprint doi: https://doi.org/10.1101/2020.01.27.920751; this version posted January 28, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 An analysis of Species Conservation Action Plans in Guinea 2 CHARLOTTE COUCH1 · DENISE MOLMOU2 · SÉKOU MAGASSOUBA2 · SAÏDOU 3 DOUMBOUYA3 · MAMADOU DIAWARA4 · MUHAMMAD YAYA DIALLO4 · 4 SÉKOU MOUSSA KEITA5 · FALAYE KONÉ3 · MAHAMADOU CELLOU DIALLO6 · 5 SÉKOU KOUROUMA3 · MAMADOU BELLA DIALLO3 · MAMADY SAYBA 6 KEITA3 · ABOUBACAR OULARE3 · IAIN DARBYSHIRE1 · EIMEAR NIC 7 LUGHADHA1 · XANDER VAN DER BURGT1 · ISABEL LARRIDON1,7 · and 8 MARTIN CHEEK1 9 10 1 Royal Botanic Gardens, Kew, Richmond, Surrey, TW9 3AE, UK. 11 2 Herbier National de Guinée, Université Gamal Abdel Nasser de Conakry, Guinea 12 3 Ministre de l’Environnement, Eaux et Forêts, République de Guinée, Conakry, Guinea 13 4 Guinée Ecologie, Dixinn, Conakry, Guinea 14 5 Centre d’Etudes de Recherche en Environnement (CERE), Université Gamal Abdel Nasser 15 de Conakry, Guinea 16 6 Protection et Gestion de l’Environnement (PEG) (Environmental NGO), Conakry, Guinea. 17 7 Ghent University, Department of Biology, Systematic and Evolutionary Botany Lab, K.L. 18 Ledeganckstraat 35, 9000 Gent, Belgium 19 20 CHARLOTTE COUCH (Corresponding Author) Royal Botanic Gardens, Kew, Richmond, 21 Surrey, TW9 3AE, UK. [email protected]. ORCID: 0000-0002-5707-9253 22 23 Isabel Larridon ORCID: 0000-0003-0285-722X 24 Martin Cheek ORCID: 0000-0003-4343-3124 25 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.01.27.920751; this version posted January 28, 2020. -
Endosperm of Angiosperms and Genomic Imprinting
life Review Endosperm of Angiosperms and Genomic Imprinting Elizabeth L. Kordyum * and Sergei L. Mosyakin Institute of Botany, National Academy of Sciences of Ukraine, 01004 Kyiv, Ukraine; [email protected] or [email protected] * Correspondence: [email protected] Received: 29 April 2020; Accepted: 29 June 2020; Published: 3 July 2020 Abstract: Modern ideas about the role of epigenetic systems in the regulation of gene expression allow us to understand the mechanisms of vital activities in plants, such as genomic imprinting. It is important that genomic imprinting is known first and foremost for the endosperm, which not only provides an embryo with necessary nutrients, but also plays a special biological role in the formation of seeds and fruits. Available data on genomic imprinting in the endosperm have been obtained only for the triploid endosperm in model plants, which develops after double fertilization in a Polygonum-type embryo sac, the most common type among angiosperms. Here we provide a brief overview of a wide diversity of embryo sacs and endosperm types and ploidy levels, as well as their distribution in the angiosperm families, positioned according to the Angiosperm Phylogeny Group IV (APG IV) phylogenetic classification. Addition of the new, non-model taxa to study gene imprinting in seed development will extend our knowledge about the epigenetic mechanisms underlying angiosperm fertility. Keywords: embryo sack; endosperm; genomic imprinting; phylogeny; ploidy 1. Introduction The history of science convinces us that scientific thought and discoveries usually develop in a spiral pattern: at new turns, old problems acquire new levels of understanding in the light of new ideas and methodological approaches, as well as new achievements in technology, chemistry, and bioinformatics. -
New Scientific Discoveries: Plants and Fungi
Received: 26 April 2020 | Revised: 4 June 2020 | Accepted: 5 June 2020 DOI: 10.1002/ppp3.10148 REVIEW New scientific discoveries: Plants and fungi Martin Cheek1 | Eimear Nic Lughadha2 | Paul Kirk3 | Heather Lindon3 | Julia Carretero3 | Brian Looney4 | Brian Douglas1 | Danny Haelewaters5,6,7 | Ester Gaya8 | Theo Llewellyn8,9 | A. Martyn Ainsworth1 | Yusufjon Gafforov10 | Kevin Hyde11 | Pedro Crous12 | Mark Hughes13 | Barnaby E. Walker2 | Rafaela Campostrini Forzza14 | Khoon Meng Wong15 | Tuula Niskanen1 1Identification and Naming, Royal Botanic Gardens, Kew, UK 2Conservation Science, Royal Botanic Gardens, Kew, UK 3Biodiversity Informatics and Spatial Analysis, Royal Botanic Gardens, Kew, UK 4Vilgalys Mycology Laboratory, Department of Biology, Duke University, Durham, NC, USA 5Department of Botany and Plant Pathology, Purdue University, West Lafayette, IN, USA 6Herbario UCH, Universidad Autónoma de Chiriquí, David, Panama 7Department of Biology, Research Group Mycology, Ghent University, Gent, Belgium 8Comparative Plant and Fungal Biology, Royal Botanic Gardens, Kew, UK 9Department of Life Sciences, Imperial College London, London, UK 10Laboratory of Mycology, Institute of Botany, Academy of Sciences of the Republic of Uzbekistan, Tashkent, Uzbekistan 11Center of Excellence in Fungal Research, Mae Fah Luang University, Thailand 12Westerdijk Fungal Biodiversity Institute, Utrecht, The Netherlands 13Royal Botanic Garden Edinburgh, Edinburgh, United Kingdom 14Jardim Botânico do Rio de Janeiro, Rio de Janeiro, Brasil 15Singapore Botanic Gardens, National Parks Board, Singapore, Singapore Correspondence Martin Cheek, Identification and Naming Societal Impact Statement Department, Royal Botanic Gardens, Kew, Research and publication of the planet's remaining plant and fungal species as yet Richmond TW9 3AE, UK. Email: [email protected] unknown to science is essential if we are to address the United Nations Sustainable Development Goal (SDG) 15 “Life on Land” which includes the protection of ter- restrial ecosystems and halting of biodiversity loss. -
Molecular Phylogenetic Analysis of Podostemaceae: Implications for Taxonomy of Major Groups
bs_bs_banner Botanical Journal of the Linnean Society, 2012, 169, 461–492. With 2 figures Molecular phylogenetic analysis of Podostemaceae: implications for taxonomy of major groups SATOSHI KOI1*, YOKO KITA2, YUMIKO HIRAYAMA1, ROLF RUTISHAUSER3, KONRAD A. HUBER3 and MASAHIRO KATO1 1Department of Botany, National Museum of Nature and Science, Tsukuba 305-0005, Japan 2Department of Biological Sciences, University of Tokyo, Hongo, Tokyo 113-0033, Japan 3Institute for Systematic Botany, University of Zurich, CH-8008 Zurich, Switzerland Received 23 August 2011; revised 15 January 2012; accepted for publication 27 March 2012 The river-weed family Podostemaceae (c. 300 species in c. 54 genera) shows a number of morphological innovations to be adapted to its unusual aquatic habitat, and its unique or rare bauplan features have been reflected in the traditional (i.e. non-molecular) classification recognizing numerous monotypic or oligospecific genera. The infra- subfamilial relationships of many genera remained unclear. The present study used molecular phylogenetic analysis of matK sequences for 657 samples (c. 132 species/c. 43 genera). The family was traditionally divided into three subfamilies (Podostemoideae, Tristichoideae and Weddellinoideae). American Podostemoideae were shown to be polyphyletic and divided into four clades, i.e. Ceratolacis, Diamantina, Podostemum and all other genera. Among the podostemoid clades, Diamantina was the first branching clade and a clade comprising Mourera and the Apinagia subclade was then sister to the remainder of the New World and Old World Podostemoideae with low statistic supports. The Old World Podostemoideae comprised four monophyletic clades, i.e. two African clades, one Madagascan clade and one Asian clade, although the relationships among these clades and American Ceratolacis and Podostemum were poorly resolved. -
A Phylogenetic Approach
20 Tulane Undergraduate Research Journal | 2015 Floral Character Evolution in Response to an Aquatic Environment in Podostemaceae: A Phylogenetic Approach Rachel Herschlag, Tulane University Abstract Habitat transition is a common driving force for change in morphological characters. One of the most dramatic habitat transitions is that between terrestrial and aquatic ecosystems, which has occurred numerous times in both directions throughout the evolutionary history of flowering plants. Podostemaceae, more commonly known as the riverweeds, evolved from terrestrial to freshwater ecosystems and subsequently experienced an overall reduction in number of floral characters. Taking a phylogenetic approach, this study served as a preliminary investigation into evolutionary trends of four floral characters: 1) stamen number, 2) tepal number, 3) stigma number and 4) locule number. Mapped on a phylogeny based upon Maximum Likelihood, all four characters show overall reduction but characters became reduced at different rates. Stamen and tepal numbers showed a rapid initial decrease followed by a gradual increase, stigma number showed a rapid initial decrease then stabilization, and locule number showed a gradual persistent decrease. The difference in trends among the four floral characters is likely due to differences in habitat, but further research is needed. It may seem surprising that organisms so well adapted Podostemaceae, commonly known as the riverweed to survive and reproduce in their environments evolve family, are the largest strictly aquatic flowering plant into new habitats, yet habitat transitions have occurred family (approximately 280 species, 49 genera) and numerous times throughout the history of life. one of the best examples of reduced morphological Transitions into new habitats are often accompanied by features associated with colonization into aquatic changes in species morphology, as natural selection acts habitats (Cook and Rutishauser, 2007). -
A Systematic Compilation of Endemic Flora in Nigeria for Conservation Management
Journal of Threatened Taxa | www.threatenedtaxa.org | 26 October 2014 | 6(11): 6406–6426 A systematic compilation of endemic flora in Nigeria Communication for conservation management ISSN 0974-7907 (Online) T.I. Borokini 1,2 ISSN 0974-7893 (Print) 1 Plant Genetic Resources Unit, National Centre for Genetic Resources and Biotechnology (NACGRAB), Ibadan, Nigeria OPEN ACCESS 2 Ecology, Evolution and Conservation Biology Unit, Department of Biology, University of Nevada, Reno NV 89557-0314, USA [email protected] Abstract: Endemic species with limited geographical ranges are more susceptible to extinction than widely ranging species, and effective conservation management of endemic species requires detailed knowledge of their status and distribution. This study was conducted to assemble a comprehensive list of flora endemic to Nigeria. While earlier reports listed as many as 205 endemic plant species, only 91 species belonging to 44 families were found in this study, with Rubiaceae accounting for the highest number of species. The list contains 23 trees, 26 herbs, 22 shrubs, 14 epiphytic orchids and bryophytes, three vines and three ferns. The Oban Division of the Cross River National Park houses 41 endemic plants, while other notable locations for endemic flora include Eket, Naraguta, Degema, Idanre hills, Ukpon River Forest Reserve, Calabar and Anara Forest Reserve. Only 15 of the endemic plants are listed in the IUCN Red List of Threatened Species version 2013.2, ranging from Vulnerable to Critically Endangered. Keywords: Biodiversity, biogeography, conservation, distribution range, endangered species, endemic flora, Nigeria, Rubiaceae, Transboundary Protected Areas. French Abstract: Les espèces endémiques avec les zones géographiques limitées sont plus sensibles à l’extinction que largement allant espèces et efficace gestion de la conservation des espèces endémiques exige une connaissance détaillée de leur statut et de la distribution. -
Free-Sample-Pages.Pdf
Published by Plant Gateway Ltd., Hertford, SG13 7BX, United Kingdom © Plant Gateway 2014 This book is in copyright. Subject to statutory exception and to the provision of relevant col- lective licensing agreements, no reproduction of any part may take place without the written permission of Plant Gateway Ltd. ISBN 978-0-9929993-0-8 eISBN 978-0-9929993-1-5 Plant Gateway Ltd. has no responsibility for the persistence or accuracy of URLS for external or third-party internet websites referred to in this book, and does not guarantee that any content on such websites is, or will remain, accurate or appropriate. Additional information on the book can be found at: www.plantgateway.com An appropriate citation for this eBook is: Byng JW. 2014. The Flowering Plants Handbook: A practical guide to families and genera of the world. Plant Gateway Ltd., Hertford, UK. eBook available from: www.plantgateway.com From the war of nature, from famine and death, the most exalted object which we are capable of conceiving, namely, the production of the higher animals, directly follows. There is grandeur in this view of life, with its several powers, having been originally breathed into a few forms or into one; and that, whilst this planet has gone cycling on according to the fixed law of gravity, from so simple a beginning endless forms most beautiful and most wonderful have been, and are being, evolved. Charles Darwin On The Origin of Species (1859) CONTENTS The Flowering Plants Handbook A practical guide to families and genera of the world James W. Byng eBook version CONTENTS DEDICATION This work is a dwarf standing on the shoulders of giants and is dedicated to the many botanists, both past and present, for the huge body of knowledge that exists today. -
Cheek Et Al - Inversodicraea
Cheek et al - Inversodicraea 1Inversodicraea koukoutamba and I. tassing (Podostemaceae), new waterfall species from Guinea, West Africa M. Cheek1, D. Molmou2, L. Jennings1, S. Magassouba2, X. van der Burgt1 5 1 Herbarium, Royal Botanic Gardens, Kew, Richmond, Surrey, TW9 3AE, U.K. Corresponding author e-mail [email protected] ² Herbier National de Guineé, Université de Gamal Abdel Nasser, BP 680, République de Guinée. 10 Keywords: Bafing River, Conservation, Dams, Extinct, Guinea, Hydro-electricity, OMVS, Waterfalls, World Bank. Abstract. Two new species of Inversodicraea, I. koukoutamba and I. tassing, both from 15 the Republic of Guinea, are described as new to science, increasing the number of species known in this African genus to 32, making it the most species-diverse among African Podostemaceae. Both species are remarkable, among other features, for their styles. Inversodicraea koukoutamba is only the third species of the genus with 3, not 2 styles, and is unique in the genus, and in the family, in having each style bifurcate. Inversodicraea 20 tassing has styles equal or exceeding the length of the ovary, being nearly twice as long as those of the species which previously was noted for the longest styles in the genus. Both new species are single-site endemics, the first is assessed here as Critically Endangered according to the IUCN 2012 standard, due to the incipient construction of the World Bank backed Koukoutamba hydroelectric dam which threatens several other plant species 25 assessed as Critically Endangered or Endangered. The second species, I. tassing, is assessed as Near Threatened, since there are currently no threats known at present to the single known site. -
Reconstructing Deep‐Time Palaeoclimate Legacies in The
Received: 25 October 2016 | Revised: 23 December 2017 | Accepted: 4 January 2018 DOI: 10.1111/geb.12724 RESEARCH PAPER Reconstructing deep-time palaeoclimate legacies in the clusioid Malpighiales unveils their role in the evolution and extinction of the boreotropical flora Andrea S. Meseguer1,2,3 | Jorge M. Lobo4 | Josselin Cornuault1 | David Beerling5 | Brad R. Ruhfel6,7 | Charles C. Davis7 | Emmanuelle Jousselin2 | Isabel Sanmartín1 1Department of Biodiversity and Conservation, Real Jardín Botanico, Abstract RJB-CSIC, Madrid, Spain Aim: During its entire history, the Earth has gone through periods of climate change similar in scale 2 INRA, UMR 1062 CBGP (INRA, IRD, and pace to the warming trend observed today in the Anthropocene. The impact of these ancient CIRAD, Montpellier SupAgro), The Center for Biology and Management of Populations climatic events on the evolutionary trajectories of organisms provides clues on the organismal (CBGP), Montferrier-sur-Lez, France response to climate change, including extinction, migration and persistence. Here, we examine the 3CNRS, UMR 5554 Institut des Sciences de evolutionary response to climate cooling/warming events of the clusioid families Calophyllaceae, l’Evolution (Universite de Montpellier), Podostemaceae and Hypericaceae (CPH clade) and the genus Hypericum as test cases. Montpellier, France 4Department of Biogeography and Global Location: Holarctic. Change, Museo Nacional Ciencias Naturales, Time period: Late Cretaceous–Cenozoic. MNCN-CSIC, Madrid, Spain 5Department of Animal and Plant Sciences, Major taxa studied: Angiosperms. University of Sheffield, Sheffield, United Kingdom Methods: We use palaeoclimate simulations, species distribution models and phylogenetic com- 6Department of Biological Sciences, Eastern parative approaches calibrated with fossils. Kentucky University, Richmond, Kentucky Results: Ancestral CPH lineages could have been distributed in the Holarctic 100 Ma, occupying 7 Department of Organismic and tropical subhumid assemblages, a finding supported by the fossil record. -
Floral Structure and Palynology of Podostemum Weddellianum (Podostemaceae: Malpighiales)
Plant Syst Evol (2010) 290:141–149 DOI 10.1007/s00606-010-0356-4 ORIGINAL ARTICLE Floral structure and palynology of Podostemum weddellianum (Podostemaceae: Malpighiales) B. de Sa´-Haiad • C. A. Torres • V. H. R. de Abreu • M. R. Gonc¸alves • C. B. F. Mendonc¸a • L. D. R. de Santiago-Fernandes • C. P. Bove • V. Gonc¸alves-Esteves Received: 30 May 2010 / Accepted: 6 September 2010 / Published online: 5 October 2010 Ó Springer-Verlag 2010 Abstract The family Podostemaceae is exceptional Introduction among angiosperms because of its uncommon biology and morphology, the absence of double fertilisation and endo- Podostemaceae are the largest family of strictly aquatic sperm, and the obscure distinction between root, stem, and angiosperms, encompassing ca. 50 genera and approxi- leaf. The highly modified morphology produced by mately 280 mainly pantropical species (Cook and Rutish- reductions and specialisations is reflected in the multiple auser, 2007) of perennial or annual herbs. They occur positions that the Podostemaceae has occupied in different firmly attached on rocks in river rapids and waterfalls. classification systems. In the family, structural studies are Brazil is the area of greatest diversity, with 18 genera, six mainly related to the vegetative body. In the genus Podo- of them endemic (Philbrick et al. 2010). stemum, structural data are related to the development Podostemaceae stand out among angiosperms because and embryology of Podostemum ceratophyllum Michx., of their uncommon biology and morphology—the absence which, with P. weddellianum, has pre-anthesis cleistogamy. of double fertilisation and endosperm (Haig 1990;Raghavan P. weddellianum is analysed for the first time with regard 2003) and the obscure distinction between root, stem, and to floral structure and palynology.