How to Get Off the Mismatch at the Generic Rank in African Podostemaceae?
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Evolution of Unusual Morphologies in Lentibulariaceae (Bladderworts and Allies) And
Annals of Botany 117: 811–832, 2016 doi:10.1093/aob/mcv172, available online at www.aob.oxfordjournals.org REVIEW: PART OF A SPECIAL ISSUE ON DEVELOPMENTAL ROBUSTNESS AND SPECIES DIVERSITY Evolution of unusual morphologies in Lentibulariaceae (bladderworts and allies) and Podostemaceae (river-weeds): a pictorial report at the interface of developmental biology and morphological diversification Rolf Rutishauser* Institute of Systematic Botany, University of Zurich, Zurich, Switzerland * For correspondence. E-mail [email protected] Received: 30 July 2015 Returned for revision: 19 August 2015 Accepted: 25 September 2015 Published electronically: 20 November 2015 Background Various groups of flowering plants reveal profound (‘saltational’) changes of their bauplans (archi- tectural rules) as compared with related taxa. These plants are known as morphological misfits that appear as rather Downloaded from large morphological deviations from the norm. Some of them emerged as morphological key innovations (perhaps ‘hopeful monsters’) that gave rise to new evolutionary lines of organisms, based on (major) genetic changes. Scope This pictorial report places emphasis on released bauplans as typical for bladderworts (Utricularia,approx. 230 secies, Lentibulariaceae) and river-weeds (Podostemaceae, three subfamilies, approx. 54 genera, approx. 310 species). Bladderworts (Utricularia) are carnivorous, possessing sucking traps. They live as submerged aquatics (except for their flowers), as humid terrestrials or as epiphytes. Most Podostemaceae are restricted to rocks in tropi- http://aob.oxfordjournals.org/ cal river-rapids and waterfalls. They survive as submerged haptophytes in these extreme habitats during the rainy season, emerging with their flowers afterwards. The recent scientific progress in developmental biology and evolu- tionary history of both Lentibulariaceae and Podostemaceae is summarized. -
First Steps Towards a Floral Structural Characterization of the Major Rosid Subclades
Zurich Open Repository and Archive University of Zurich Main Library Strickhofstrasse 39 CH-8057 Zurich www.zora.uzh.ch Year: 2006 First steps towards a floral structural characterization of the major rosid subclades Endress, P K ; Matthews, M L Abstract: A survey of our own comparative studies on several larger clades of rosids and over 1400 original publications on rosid flowers shows that floral structural features support to various degrees the supraordinal relationships in rosids proposed by molecular phylogenetic studies. However, as many apparent relationships are not yet well resolved, the structural support also remains tentative. Some of the features that turned out to be of interest in the present study had not previously been considered in earlier supraordinal studies. The strongest floral structural support is for malvids (Brassicales, Malvales, Sapindales), which reflects the strong support of phylogenetic analyses. Somewhat less structurally supported are the COM (Celastrales, Oxalidales, Malpighiales) and the nitrogen-fixing (Cucurbitales, Fagales, Fabales, Rosales) clades of fabids, which are both also only weakly supported in phylogenetic analyses. The sister pairs, Cucurbitales plus Fagales, and Malvales plus Sapindales, are structurally only weakly supported, and for the entire fabids there is no clear support by the present floral structural data. However, an additional grouping, the COM clade plus malvids, shares some interesting features but does not appear as a clade in phylogenetic analyses. Thus it appears that the deepest split within eurosids- that between fabids and malvids - in molecular phylogenetic analyses (however weakly supported) is not matched by the present structural data. Features of ovules including thickness of integuments, thickness of nucellus, and degree of ovular curvature, appear to be especially interesting for higher level relationships and should be further explored. -
Plantas De Corredeiras: Reprodução E Conservação De Podostemaceae
Copyright© jan-fev 2015 do(s) autor(es). Publicado pela ESFA [on line] http://www.naturezaonline.com.br Silva IC, Bove CP, Koschnitzke C (2015) Plantas de corredeiras: reprodução e conservação de Podostemaceae. Natureza on line 13 (1): 6-11. Submetido em: 12/11/2014 Revisado em:20/12/2014 Aceito em:05/02/2015 ISSN 1806–7409 Plantas de corredeiras: reprodução e conservação de Podostemaceae River-rapid plants: reproduction and conservation of Podostemaceae Inara C Silva¹, Claudia P Bove1* e Cristiana Koschnitzke1 Museu Nacional/Universidade Federal do Rio de Janeiro, Quinta da Boa Vista s.n., CEP 20940-040, São Cristóvão, Rio de Janeiro, RJ, Brasil. *Autor para correspondência: [email protected] Resumo Rios com corredeiras são ambientes de forte pressão dados advindos da reprodução podem fornecer fontes importantes seletiva, o que limita o estabelecimento de muitas angiospermas. para o estabelecimento de estratégias de conservação, pois são fatores Nestes habitats se encontra uma família de angiospermas aquáticas que influenciam diretamente as populações. Ademais, a manutenção de hábito herbáceo, aderidas às rochas em locais expostos ao sol, in situ é a única forma viável de conservação para Podostemaceae. com uma morfologia única, Podostemaceae. Está essencialmente distribuída nos trópicos e apresenta alto grau de endemismos. No Palavras-chaves: reprodução, conservação, reófitas, plantas Brasil as espécies ocorrem em todos os domínios fitogeográficos,com aquáticas, Podostemaceae. mais de 53 espécies endêmicas. Realizamos aqui uma retrospectiva do estado-da-arte da biologia reprodutiva para a família, a fim de Abstract Rapids are strong selective environment, limiting the detectar as lacunas para o direcionamento de estudos futuros, establishment of many angiosperms. -
How Does Genome Size Affect the Evolution of Pollen Tube Growth Rate, a Haploid
Manuscript bioRxiv preprint doi: https://doi.org/10.1101/462663; this version postedClick April here18, 2019. to The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv aaccess/download;Manuscript;PTGR.genome.evolution.15April20 license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Effects of genome size on pollen performance 2 3 4 5 How does genome size affect the evolution of pollen tube growth rate, a haploid 6 performance trait? 7 8 9 10 11 John B. Reese1,2 and Joseph H. Williams2 12 Department of Ecology and Evolutionary Biology, University of Tennessee, Knoxville, TN 13 37996, U.S.A. 14 15 16 17 1Author for correspondence: 18 John B. Reese 19 Tel: 865 974 9371 20 Email: [email protected] 21 1 bioRxiv preprint doi: https://doi.org/10.1101/462663; this version posted April 18, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 22 ABSTRACT 23 Premise of the Study – Male gametophytes of most seed plants deliver sperm to eggs via a 24 pollen tube. Pollen tube growth rates (PTGRs) of angiosperms are exceptionally rapid, a pattern 25 attributed to more effective haploid selection under stronger pollen competition. Paradoxically, 26 whole genome duplication (WGD) has been common in angiosperms but rare in gymnosperms. -
Systematics and Biogeography of the Clusioid Clade (Malpighiales) Brad R
Eastern Kentucky University Encompass Biological Sciences Faculty and Staff Research Biological Sciences January 2011 Systematics and Biogeography of the Clusioid Clade (Malpighiales) Brad R. Ruhfel Eastern Kentucky University, [email protected] Follow this and additional works at: http://encompass.eku.edu/bio_fsresearch Part of the Plant Biology Commons Recommended Citation Ruhfel, Brad R., "Systematics and Biogeography of the Clusioid Clade (Malpighiales)" (2011). Biological Sciences Faculty and Staff Research. Paper 3. http://encompass.eku.edu/bio_fsresearch/3 This is brought to you for free and open access by the Biological Sciences at Encompass. It has been accepted for inclusion in Biological Sciences Faculty and Staff Research by an authorized administrator of Encompass. For more information, please contact [email protected]. HARVARD UNIVERSITY Graduate School of Arts and Sciences DISSERTATION ACCEPTANCE CERTIFICATE The undersigned, appointed by the Department of Organismic and Evolutionary Biology have examined a dissertation entitled Systematics and biogeography of the clusioid clade (Malpighiales) presented by Brad R. Ruhfel candidate for the degree of Doctor of Philosophy and hereby certify that it is worthy of acceptance. Signature Typed name: Prof. Charles C. Davis Signature ( ^^^M^ *-^£<& Typed name: Profy^ndrew I^4*ooll Signature / / l^'^ i •*" Typed name: Signature Typed name Signature ^ft/V ^VC^L • Typed name: Prof. Peter Sfe^cnS* Date: 29 April 2011 Systematics and biogeography of the clusioid clade (Malpighiales) A dissertation presented by Brad R. Ruhfel to The Department of Organismic and Evolutionary Biology in partial fulfillment of the requirements for the degree of Doctor of Philosophy in the subject of Biology Harvard University Cambridge, Massachusetts May 2011 UMI Number: 3462126 All rights reserved INFORMATION TO ALL USERS The quality of this reproduction is dependent upon the quality of the copy submitted. -
(<I>Podostemaceae</I>), New Waterfa
Blumea 64, 2019: 216–224 www.ingentaconnect.com/content/nhn/blumea RESEARCH ARTICLE https://doi.org/10.3767/blumea.2019.64.03.03 Inversodicraea koukoutamba and I. tassing (Podostemaceae), new waterfall species from Guinea, West Africa M. Cheek1, D. Molmou2, L. Jennings1, S. Magassouba2, X. van der Burgt1 Key words Abstract Two new species of Inversodicraea, I. koukoutamba and I. tassing, both from the Republic of Guinea, are described as new to science, increasing the number of species known in this African genus to 32, making it the Bafing River most species-diverse among African Podostemaceae. Both species are remarkable, among other features, for their conservation styles. Inversodicraea koukoutamba is only the third species of the genus with 3, not 2 styles, and is unique in the dams genus, and in the family, in having each style bifurcate. Inversodicraea tassing has styles equal or exceeding the extinct length of the ovary, being nearly twice as long as those of the species which previously was noted for the longest Guinea styles in the genus. Both new species are single-site endemics, the first is assessed here as Critically Endangered hydroelectricity according to the IUCN 2012 standard, due to the incipient construction of the World Bank backed Koukoutamba OMVS hydroelectric dam which threatens several other plant species assessed as Critically Endangered or Endangered. waterfalls The second species, I. tassing, is assessed as Near Threatened, since there are currently no threats known at World Bank present to the single known site. Published on 25 September 2019 INTRODUCTION All species of the family are restricted to rocks in rapids and waterfalls of clear-water rivers and are therefore rheophytes. -
An Analysis of Species Conservation Action Plans in Guinea
bioRxiv preprint doi: https://doi.org/10.1101/2020.01.27.920751; this version posted January 28, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 An analysis of Species Conservation Action Plans in Guinea 2 CHARLOTTE COUCH1 · DENISE MOLMOU2 · SÉKOU MAGASSOUBA2 · SAÏDOU 3 DOUMBOUYA3 · MAMADOU DIAWARA4 · MUHAMMAD YAYA DIALLO4 · 4 SÉKOU MOUSSA KEITA5 · FALAYE KONÉ3 · MAHAMADOU CELLOU DIALLO6 · 5 SÉKOU KOUROUMA3 · MAMADOU BELLA DIALLO3 · MAMADY SAYBA 6 KEITA3 · ABOUBACAR OULARE3 · IAIN DARBYSHIRE1 · EIMEAR NIC 7 LUGHADHA1 · XANDER VAN DER BURGT1 · ISABEL LARRIDON1,7 · and 8 MARTIN CHEEK1 9 10 1 Royal Botanic Gardens, Kew, Richmond, Surrey, TW9 3AE, UK. 11 2 Herbier National de Guinée, Université Gamal Abdel Nasser de Conakry, Guinea 12 3 Ministre de l’Environnement, Eaux et Forêts, République de Guinée, Conakry, Guinea 13 4 Guinée Ecologie, Dixinn, Conakry, Guinea 14 5 Centre d’Etudes de Recherche en Environnement (CERE), Université Gamal Abdel Nasser 15 de Conakry, Guinea 16 6 Protection et Gestion de l’Environnement (PEG) (Environmental NGO), Conakry, Guinea. 17 7 Ghent University, Department of Biology, Systematic and Evolutionary Botany Lab, K.L. 18 Ledeganckstraat 35, 9000 Gent, Belgium 19 20 CHARLOTTE COUCH (Corresponding Author) Royal Botanic Gardens, Kew, Richmond, 21 Surrey, TW9 3AE, UK. [email protected]. ORCID: 0000-0002-5707-9253 22 23 Isabel Larridon ORCID: 0000-0003-0285-722X 24 Martin Cheek ORCID: 0000-0003-4343-3124 25 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.01.27.920751; this version posted January 28, 2020. -
Endosperm of Angiosperms and Genomic Imprinting
life Review Endosperm of Angiosperms and Genomic Imprinting Elizabeth L. Kordyum * and Sergei L. Mosyakin Institute of Botany, National Academy of Sciences of Ukraine, 01004 Kyiv, Ukraine; [email protected] or [email protected] * Correspondence: [email protected] Received: 29 April 2020; Accepted: 29 June 2020; Published: 3 July 2020 Abstract: Modern ideas about the role of epigenetic systems in the regulation of gene expression allow us to understand the mechanisms of vital activities in plants, such as genomic imprinting. It is important that genomic imprinting is known first and foremost for the endosperm, which not only provides an embryo with necessary nutrients, but also plays a special biological role in the formation of seeds and fruits. Available data on genomic imprinting in the endosperm have been obtained only for the triploid endosperm in model plants, which develops after double fertilization in a Polygonum-type embryo sac, the most common type among angiosperms. Here we provide a brief overview of a wide diversity of embryo sacs and endosperm types and ploidy levels, as well as their distribution in the angiosperm families, positioned according to the Angiosperm Phylogeny Group IV (APG IV) phylogenetic classification. Addition of the new, non-model taxa to study gene imprinting in seed development will extend our knowledge about the epigenetic mechanisms underlying angiosperm fertility. Keywords: embryo sack; endosperm; genomic imprinting; phylogeny; ploidy 1. Introduction The history of science convinces us that scientific thought and discoveries usually develop in a spiral pattern: at new turns, old problems acquire new levels of understanding in the light of new ideas and methodological approaches, as well as new achievements in technology, chemistry, and bioinformatics. -
Evo-Devo and the Search for Homology
Available online at www.sciencedirect.com SCIENCE @DIRECT Theory in Bi0sciences ELSEVIER Theory in Biosciences 124 (2005) 213-241 www.elsevier.de/thbio Evo-devo and the search for homology ("sameness") in biological systems Rolf Rutishauser*, Philip Moline Institut fffr Systematische Botanik der Universitdt Zffrich, Zollikerstr. 107, CH-8008 Zffrich, Switzerland Received 14 May 2005; accepted 8 September 2005 Abstract Developmental biology and evolutionary studies have merged into evolutionary develop- mental biology ("evo-devo"). This synthesis already influenced and still continues to change the conceptual framework of structural biology. One of the cornerstones of structural biology is the concept of homology. But the search for homology ("sameness") of biological structures depends on our favourite perspectives (axioms, paradigms). Five levels of homology ("sameness") can be identified in the literature, although they overlap to some degree: (i) serial homology (homonomy) within modular organisms, (ii) historical homology (synapo- morphy), which is taken as the only acceptable homology by many biologists, (iii) underlying homology (i.e., parallelism) in closely related taxa, (iv) deep evolutionary homology due to the "same" master genes in distantly related phyla, and (v) molecular homology exclusively at gene level. The following essay gives emphasis on the heuristic advantages of seemingly opposing perspectives in structural biology, with examples mainly from comparative plant morphology. The organization of the plant body in the majority of angiosperms led to the recognition of the classical root-shoot model. In some lineages bauplan rules were transcended during evolution and development. This resulted in morphological misfits such as the Podostemaceae, peculiar eudicots adapted to submerged river rocks. -
New Scientific Discoveries: Plants and Fungi
Received: 26 April 2020 | Revised: 4 June 2020 | Accepted: 5 June 2020 DOI: 10.1002/ppp3.10148 REVIEW New scientific discoveries: Plants and fungi Martin Cheek1 | Eimear Nic Lughadha2 | Paul Kirk3 | Heather Lindon3 | Julia Carretero3 | Brian Looney4 | Brian Douglas1 | Danny Haelewaters5,6,7 | Ester Gaya8 | Theo Llewellyn8,9 | A. Martyn Ainsworth1 | Yusufjon Gafforov10 | Kevin Hyde11 | Pedro Crous12 | Mark Hughes13 | Barnaby E. Walker2 | Rafaela Campostrini Forzza14 | Khoon Meng Wong15 | Tuula Niskanen1 1Identification and Naming, Royal Botanic Gardens, Kew, UK 2Conservation Science, Royal Botanic Gardens, Kew, UK 3Biodiversity Informatics and Spatial Analysis, Royal Botanic Gardens, Kew, UK 4Vilgalys Mycology Laboratory, Department of Biology, Duke University, Durham, NC, USA 5Department of Botany and Plant Pathology, Purdue University, West Lafayette, IN, USA 6Herbario UCH, Universidad Autónoma de Chiriquí, David, Panama 7Department of Biology, Research Group Mycology, Ghent University, Gent, Belgium 8Comparative Plant and Fungal Biology, Royal Botanic Gardens, Kew, UK 9Department of Life Sciences, Imperial College London, London, UK 10Laboratory of Mycology, Institute of Botany, Academy of Sciences of the Republic of Uzbekistan, Tashkent, Uzbekistan 11Center of Excellence in Fungal Research, Mae Fah Luang University, Thailand 12Westerdijk Fungal Biodiversity Institute, Utrecht, The Netherlands 13Royal Botanic Garden Edinburgh, Edinburgh, United Kingdom 14Jardim Botânico do Rio de Janeiro, Rio de Janeiro, Brasil 15Singapore Botanic Gardens, National Parks Board, Singapore, Singapore Correspondence Martin Cheek, Identification and Naming Societal Impact Statement Department, Royal Botanic Gardens, Kew, Research and publication of the planet's remaining plant and fungal species as yet Richmond TW9 3AE, UK. Email: [email protected] unknown to science is essential if we are to address the United Nations Sustainable Development Goal (SDG) 15 “Life on Land” which includes the protection of ter- restrial ecosystems and halting of biodiversity loss. -
Molecular Phylogenetic Analysis of Podostemaceae: Implications for Taxonomy of Major Groups
bs_bs_banner Botanical Journal of the Linnean Society, 2012, 169, 461–492. With 2 figures Molecular phylogenetic analysis of Podostemaceae: implications for taxonomy of major groups SATOSHI KOI1*, YOKO KITA2, YUMIKO HIRAYAMA1, ROLF RUTISHAUSER3, KONRAD A. HUBER3 and MASAHIRO KATO1 1Department of Botany, National Museum of Nature and Science, Tsukuba 305-0005, Japan 2Department of Biological Sciences, University of Tokyo, Hongo, Tokyo 113-0033, Japan 3Institute for Systematic Botany, University of Zurich, CH-8008 Zurich, Switzerland Received 23 August 2011; revised 15 January 2012; accepted for publication 27 March 2012 The river-weed family Podostemaceae (c. 300 species in c. 54 genera) shows a number of morphological innovations to be adapted to its unusual aquatic habitat, and its unique or rare bauplan features have been reflected in the traditional (i.e. non-molecular) classification recognizing numerous monotypic or oligospecific genera. The infra- subfamilial relationships of many genera remained unclear. The present study used molecular phylogenetic analysis of matK sequences for 657 samples (c. 132 species/c. 43 genera). The family was traditionally divided into three subfamilies (Podostemoideae, Tristichoideae and Weddellinoideae). American Podostemoideae were shown to be polyphyletic and divided into four clades, i.e. Ceratolacis, Diamantina, Podostemum and all other genera. Among the podostemoid clades, Diamantina was the first branching clade and a clade comprising Mourera and the Apinagia subclade was then sister to the remainder of the New World and Old World Podostemoideae with low statistic supports. The Old World Podostemoideae comprised four monophyletic clades, i.e. two African clades, one Madagascan clade and one Asian clade, although the relationships among these clades and American Ceratolacis and Podostemum were poorly resolved. -
A Phylogenetic Approach
20 Tulane Undergraduate Research Journal | 2015 Floral Character Evolution in Response to an Aquatic Environment in Podostemaceae: A Phylogenetic Approach Rachel Herschlag, Tulane University Abstract Habitat transition is a common driving force for change in morphological characters. One of the most dramatic habitat transitions is that between terrestrial and aquatic ecosystems, which has occurred numerous times in both directions throughout the evolutionary history of flowering plants. Podostemaceae, more commonly known as the riverweeds, evolved from terrestrial to freshwater ecosystems and subsequently experienced an overall reduction in number of floral characters. Taking a phylogenetic approach, this study served as a preliminary investigation into evolutionary trends of four floral characters: 1) stamen number, 2) tepal number, 3) stigma number and 4) locule number. Mapped on a phylogeny based upon Maximum Likelihood, all four characters show overall reduction but characters became reduced at different rates. Stamen and tepal numbers showed a rapid initial decrease followed by a gradual increase, stigma number showed a rapid initial decrease then stabilization, and locule number showed a gradual persistent decrease. The difference in trends among the four floral characters is likely due to differences in habitat, but further research is needed. It may seem surprising that organisms so well adapted Podostemaceae, commonly known as the riverweed to survive and reproduce in their environments evolve family, are the largest strictly aquatic flowering plant into new habitats, yet habitat transitions have occurred family (approximately 280 species, 49 genera) and numerous times throughout the history of life. one of the best examples of reduced morphological Transitions into new habitats are often accompanied by features associated with colonization into aquatic changes in species morphology, as natural selection acts habitats (Cook and Rutishauser, 2007).