Emerging and Re-Emerging Viral Diseases
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Guide for Common Viral Diseases of Animals in Louisiana
Sampling and Testing Guide for Common Viral Diseases of Animals in Louisiana Please click on the species of interest: Cattle Deer and Small Ruminants The Louisiana Animal Swine Disease Diagnostic Horses Laboratory Dogs A service unit of the LSU School of Veterinary Medicine Adapted from Murphy, F.A., et al, Veterinary Virology, 3rd ed. Cats Academic Press, 1999. Compiled by Rob Poston Multi-species: Rabiesvirus DCN LADDL Guide for Common Viral Diseases v. B2 1 Cattle Please click on the principle system involvement Generalized viral diseases Respiratory viral diseases Enteric viral diseases Reproductive/neonatal viral diseases Viral infections affecting the skin Back to the Beginning DCN LADDL Guide for Common Viral Diseases v. B2 2 Deer and Small Ruminants Please click on the principle system involvement Generalized viral disease Respiratory viral disease Enteric viral diseases Reproductive/neonatal viral diseases Viral infections affecting the skin Back to the Beginning DCN LADDL Guide for Common Viral Diseases v. B2 3 Swine Please click on the principle system involvement Generalized viral diseases Respiratory viral diseases Enteric viral diseases Reproductive/neonatal viral diseases Viral infections affecting the skin Back to the Beginning DCN LADDL Guide for Common Viral Diseases v. B2 4 Horses Please click on the principle system involvement Generalized viral diseases Neurological viral diseases Respiratory viral diseases Enteric viral diseases Abortifacient/neonatal viral diseases Viral infections affecting the skin Back to the Beginning DCN LADDL Guide for Common Viral Diseases v. B2 5 Dogs Please click on the principle system involvement Generalized viral diseases Respiratory viral diseases Enteric viral diseases Reproductive/neonatal viral diseases Back to the Beginning DCN LADDL Guide for Common Viral Diseases v. -
Pt Education-Rubella
Patient Education Healthcare Epidemiology and Infection Control Rubella An illness requiring droplet precautions This handout describes What is Rubella? Rubella and it symptoms. It Rubella (also called German measles, 3-day measles or Rubella virus also explains how this infection) is a viral disease. It can be prevented with a vaccine. disease can be spread and You are not at risk if you have: offers steps to prevent • Had blood tests showing that you are immune due to a history of others from getting it. clinical disease. To learn more about Rubella, • Received 2 doses of the MMR (Mumps, Measles, Rubella) vaccine. visit these Web sites: Rubella is a reportable disease. The health department is notified when a case is diagnosed to protect others who may have come in contact with www.cdc.gov/ncidod/dvrd/ you and are at risk of becoming ill. revb/measles/rubella_index The greatest danger from rubella is to unborn babies. If a woman gets .htm rubella in the early months of her pregnancy, there is an 80% chance that www.cdc.gov/vaccines/vpd her baby will be born with birth defects. Babies may be born deaf or blind. They may have damaged hearts or small brains. Many are mentally -vac/rubella/default.htm retarded. Miscarriages are also common among women who get rubella while they are pregnant. What are the symptoms? The symptoms of Rubella include a slight fever that lasts for about 24 hours, and a rash on the face and neck that lasts 2 or 3 days. The rash is pink or light red spots that may merge to form splotches. -
Detection of ESKAPE Pathogens and Clostridioides Difficile in Simulated
bioRxiv preprint doi: https://doi.org/10.1101/2021.03.04.433847; this version posted March 4, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. 1 Detection of ESKAPE pathogens and Clostridioides difficile in 2 Simulated Skin Transmission Events with Metagenomic and 3 Metatranscriptomic Sequencing 4 5 Krista L. Ternusa#, Nicolette C. Keplingera, Anthony D. Kappella, Gene D. Godboldb, Veena 6 Palsikara, Carlos A. Acevedoa, Katharina L. Webera, Danielle S. LeSassiera, Kathleen Q. 7 Schultea, Nicole M. Westfalla, and F. Curtis Hewitta 8 9 aSignature Science, LLC, 8329 North Mopac Expressway, Austin, Texas, USA 10 bSignature Science, LLC, 1670 Discovery Drive, Charlottesville, VA, USA 11 12 #Address correspondence to Krista L. Ternus, [email protected] 13 14 1 bioRxiv preprint doi: https://doi.org/10.1101/2021.03.04.433847; this version posted March 4, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. 15 1 Abstract 16 Background: Antimicrobial resistance is a significant global threat, posing major public health 17 risks and economic costs to healthcare systems. Bacterial cultures are typically used to diagnose 18 healthcare-acquired infections (HAI); however, culture-dependent methods provide limited 19 presence/absence information and are not applicable to all pathogens. -
Choosing the Appropriate Surface Disinfectant
antibiotics Review Back to Basics: Choosing the Appropriate Surface Disinfectant Angelica Artasensi , Sarah Mazzotta and Laura Fumagalli * Dipartimento di Scienze Farmaceutiche, Università degli Studi di Milano, Via L. Mangiagalli 25, 20133 Milano, Italy; [email protected] (A.A.); [email protected] (S.M.) * Correspondence: [email protected]; Tel.: +39-0250319303 Abstract: From viruses to bacteria, our lives are filled with exposure to germs. In built environments, exposure to infectious microorganisms and their byproducts is clearly linked to human health. In the last year, public health emergency surrounding the COVID-19 pandemic stressed the importance of having good biosafety measures and practices. To prevent infection from spreading and to maintain the barrier, disinfection and hygiene habits are crucial, especially when the microorganism can persist and survive on surfaces. Contaminated surfaces are called fomites and on them, microorganisms can survive even for months. As a consequence, fomites serve as a second reservoir and transfer pathogens between hosts. The knowledge of microorganisms, type of surface, and antimicrobial agent is fundamental to develop the best approach to sanitize fomites and to obtain good disinfection levels. Hence, this review has the purpose to briefly describe the organisms, the kind of risk associated with them, and the main classes of antimicrobials for surfaces, to help choose the right approach to prevent exposure to pathogens. Keywords: antimicrobial; disinfectant; surface disinfection; fomite; surface contamination; microor- ganisms Citation: Artasensi, A.; Mazzotta, S.; Fumagalli, L. Back to Basics: Choosing the Appropriate Surface 1. Introduction Disinfectant. Antibiotics 2021, 10, 613. In built environment, especially considering an indoor lifestyle, touching objects https://doi.org/10.3390/ or surfaces which surround us is integral to everyday life. -
Mechanistic Transmission Modeling of COVID-19 on the Diamond Princess Cruise Ship Demonstrates the Importance of Aerosol Transmission
Mechanistic transmission modeling of COVID-19 on the Diamond Princess cruise ship demonstrates the importance of aerosol transmission Parham Azimia,1, Zahra Keshavarza, Jose Guillermo Cedeno Laurenta, Brent Stephensb, and Joseph G. Allena,1 aEnvironmental Health Department, Harvard T.H. Chan School of Public Health, Boston, MA 02115; and bDepartment of Civil, Architectural, and Environmental Engineering, Illinois Institute of Technology, Chicago, IL 60616 Edited by Andrea Rinaldo, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland, and approved January 7, 2021 (received for review July 22, 2020) Several lines of existing evidence support the possibility of spreads (3). CDC has also acknowledged that airborne trans- airborne transmission of coronavirus disease 2019 (COVID-19). mission by smaller droplets traveling more than 1.8 m away from However, quantitative information on the relative importance of infected individual(s) can sometimes occur (4). transmission pathways of severe acute respiratory syndrome coro- Since the beginning of the pandemic, numerous researchers navirus 2 (SARS-CoV-2) remains limited. To evaluate the relative (5–15) and professional societies [e.g., American Society of Heat- importance of multiple transmission routes for SARS-CoV-2, we ing, Refrigerating and Air-Conditioning Engineers (16)] have raised developed a modeling framework and leveraged detailed informa- concerns that transmission of SARS-CoV-2 can occur from both tion available from the Diamond Princess cruise ship outbreak that symptomatic and asymptomatic (or presymptomatic) individuals to occurred in early 2020. We modeled 21,600 scenarios to generate a others beyond close-range contact through a combination of larger matrix of solutions across a full range of assumptions for eight respiratory droplets that are carried further than 1 to 2 m via air- unknown or uncertain epidemic and mechanistic transmission fac- flow patterns and smaller inhalable aerosols that can remain sus- R2 > tors. -
Where Do We Stand After Decades of Studying Human Cytomegalovirus?
microorganisms Review Where do we Stand after Decades of Studying Human Cytomegalovirus? 1, 2, 1 1 Francesca Gugliesi y, Alessandra Coscia y, Gloria Griffante , Ganna Galitska , Selina Pasquero 1, Camilla Albano 1 and Matteo Biolatti 1,* 1 Laboratory of Pathogenesis of Viral Infections, Department of Public Health and Pediatric Sciences, University of Turin, 10126 Turin, Italy; [email protected] (F.G.); gloria.griff[email protected] (G.G.); [email protected] (G.G.); [email protected] (S.P.); [email protected] (C.A.) 2 Complex Structure Neonatology Unit, Department of Public Health and Pediatric Sciences, University of Turin, 10126 Turin, Italy; [email protected] * Correspondence: [email protected] These authors contributed equally to this work. y Received: 19 March 2020; Accepted: 5 May 2020; Published: 8 May 2020 Abstract: Human cytomegalovirus (HCMV), a linear double-stranded DNA betaherpesvirus belonging to the family of Herpesviridae, is characterized by widespread seroprevalence, ranging between 56% and 94%, strictly dependent on the socioeconomic background of the country being considered. Typically, HCMV causes asymptomatic infection in the immunocompetent population, while in immunocompromised individuals or when transmitted vertically from the mother to the fetus it leads to systemic disease with severe complications and high mortality rate. Following primary infection, HCMV establishes a state of latency primarily in myeloid cells, from which it can be reactivated by various inflammatory stimuli. Several studies have shown that HCMV, despite being a DNA virus, is highly prone to genetic variability that strongly influences its replication and dissemination rates as well as cellular tropism. In this scenario, the few currently available drugs for the treatment of HCMV infections are characterized by high toxicity, poor oral bioavailability, and emerging resistance. -
Chronic Viral Infections Vs. Our Immune System: Revisiting Our View of Viruses As Pathogens
Chronic Viral Infections vs. Our Immune System: Revisiting our view of viruses as pathogens Tiffany A. Reese Assistant Professor Departments of Immunology and Microbiology Challenge your idea of classic viral infection and disease • Define the microbiome and the virome • Brief background on persistent viruses • Illustrate how viruses change disease susceptibility – mutualistic symbiosis – gene + virus = disease phenotype – virome in immune responses Bacteria-centric view of the microbiome The microbiome defined Definition of microbiome – Merriam-Webster 1 :a community of microorganisms (such as bacteria, fungi, and viruses) that inhabit a particular environment and especially the collection of microorganisms living in or on the human body 2 :the collective genomes of microorganisms inhabiting a particular environment and especially the human body Virome Ø Viral component of the microbiome Ø Includes both commensal and pathogenic viruses Ø Viruses that infect host cells Ø Virus-derived elements in host chromosomes Ø Viruses that infect other organisms in the body e.g. phage/bacteria Viruses are everywhere! • “intracellular parasites with nucleic acids that are capable of directing their own replication and are not cells” – Roossinck, Nature Reviews Microbiology 2011. • Viruses infect all living things. • We are constantly eating and breathing viruses from our environment • Only a small subset of viruses cause disease. • We even carry viral genomes as part of our own genetic material! Diverse viruses all over the body Adenoviridae Picornaviridae -
SARS-Cov-2 Disease Severity and Transmission Efficiency Is Increased for Airborne Compared to Fomite Exposure in Syrian Hamsters
ARTICLE https://doi.org/10.1038/s41467-021-25156-8 OPEN SARS-CoV-2 disease severity and transmission efficiency is increased for airborne compared to fomite exposure in Syrian hamsters Julia R. Port1,5, Claude Kwe Yinda1,5, Irene Offei Owusu1, Myndi Holbrook 1, Robert Fischer1, Trenton Bushmaker 1,2, Victoria A. Avanzato1, Jonathan E. Schulz1, Craig Martens3, Neeltje van Doremalen 1, ✉ Chad S. Clancy 4 & Vincent J. Munster 1 1234567890():,; Transmission of SARS-CoV-2 is driven by contact, fomite, and airborne transmission. The relative contribution of different transmission routes remains subject to debate. Here, we show Syrian hamsters are susceptible to SARS-CoV-2 infection through intranasal, aerosol and fomite exposure. Different routes of exposure present with distinct disease manifesta- tions. Intranasal and aerosol inoculation causes severe respiratory pathology, higher virus loads and increased weight loss. In contrast, fomite exposure leads to milder disease man- ifestation characterized by an anti-inflammatory immune state and delayed shedding pattern. Whereas the overall magnitude of respiratory virus shedding is not linked to disease severity, the onset of shedding is. Early shedding is linked to an increase in disease severity. Airborne transmission is more efficient than fomite transmission and dependent on the direction of the airflow. Carefully characterized SARS-CoV-2 transmission models will be crucial to assess potential changes in transmission and pathogenic potential in the light of the ongoing SARS- CoV-2 evolution. 1 Laboratory of Virology, Division of Intramural Research, National Institutes of Health, Hamilton, MT, USA. 2 Montana State University, Bozeman, MT, USA. 3 Rocky Mountain Genomics Core Facility, Division of Intramural Research, National Institutes of Health, Hamilton, MT, USA. -
Download-Todays-Data- Geographic-Distribution-Covid-19-Cases-Worldwide 48
medRxiv preprint doi: https://doi.org/10.1101/2020.05.04.20090092; this version posted August 1, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted medRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC 4.0 International license . Variation in SARS-CoV-2 free-living survival and environmental transmission can modulate the intensity of emerging outbreaks C. Brandon Ogbunugafor1,2,3*, Miles D. Miller-Dickson2, Victor A. Meszaros2, Lourdes M. Gomez1,2, Anarina L. Murillo4,5, and Samuel V. Scarpino6 1Department of Ecology and Evolutionary Biology, Yale University 06520 2Department of Ecology and Evolutionary Biology, Brown University 02912 3Center for Computational Molecular Biology, Brown University 02912 4Department of Pediatrics, Warren Alpert Medical School at Brown University 02912 5Center for Statistical Sciences, Brown University School of Public Health 02903 6Network Science Institute, Northeastern University 02115 Keywords: Environmental transmission, indirect transmission, fomites, viral free-living survival, emerging infectious diseases, ecology of infectious diseases, coronaviruses, mathematical modeling *Correspondence to: C. Brandon Ogbunugafor Department of Ecology and Evolutionary Biology Yale University [email protected] 1 NOTE: This preprint reports new research that has not been certified by peer review and should not be used to guide clinical practice. medRxiv preprint doi: https://doi.org/10.1101/2020.05.04.20090092; this version posted August 1, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted medRxiv a license to display the preprint in perpetuity. -
Fact Sheet: Basic Information About Monkeypox
MONKEYPOX FACT SHEET Basic Information about Monkeypox Monkeypox: An Emerging Infectious Disease in North America Monkeypox is a rare viral disease that is found mostly in the rainforest countries of central and west Africa. The disease is called “monkeypox” because it was first discovered in laboratory monkeys in 1958. Blood tests of animals in Africa later found evidence of monkeypox infection in various rodent species. The virus that causes monkeypox was recovered from an African squirrel, which may be the natural host. Laboratory studies showed that the virus could also infect rats, mice, and rabbits. In 1970, monkeypox was identified as the cause of a rash illness in humans in remote African locations. In early June 2003, monkeypox was reported among several residents in the United States who became ill after having contact with sick pet prairie dogs. This is the first evidence of community-acquired monkeypox in the United States. Cause of Monkeypox The disease is caused by Monkeypox virus, which belongs to the orthopoxvirus group of viruses. Other orthopoxviruses that can cause infection in humans include variola (smallpox), vaccinia (used in smallpox vaccine), and cowpox viruses. Signs and Symptoms In humans, the signs and symptoms of monkeypox are similar to those of smallpox, but usually milder. Unlike smallpox, monkeypox causes swollen lymph nodes. The incubation period for monkeypox is about 12 days.The illness begins with fever, headache, muscle aches, backache, swollen lymph nodes, a general feeling of discomfort, and exhaustion. Within 1 to 3 days (sometimes longer) after onset of fever, the patient develops a papular rash (i.e., raised bumps), often first on the face but sometimes initially on other parts of the body. -
German Measles
Rubella (German Measles) Summary Rubella is an infectious viral disease characterized by mild clinical disease, where cases are often subclinical, when symptomatic individuals may present with an erythematous maculopapular rash, lymphadenopathy and a low-grade fever. Infection with the rubella virus causes two distinct illnesses: congenital rubella syndrome (CRS) and postnatal rubella. Rubella virus occurs worldwide. It is most prevalent in winter and spring. In the United States, rubella has been largely controlled after the advent of immunization. The incidence of rubella in the U.S. has decreased by approximately 99% from the pre-vaccine era. Epidemic rubella in the U.S. last occurred in 1964. Agent Rubella virus is in the Togaviridae family, genus Rubivirus. Transmission Reservoir: Humans. Mode of transmission: For postnatal rubella, direct or droplet contact with nasopharyngeal secretions of infected persons. Infants with CRS may shed virus in nasopharyngeal secretions and urine for one year or more and can transmit infection to susceptible contacts. Period of communicability: A few days to 7 days after the onset of rash. Infants with CRS may shed virus in nasopharyngeal secretions and urine for one year or more and can transmit infection to susceptible contacts. Clinical Disease Incubation period: For postnatally acquired rubella, usually 16-18 days; range 14-21 days. Illness: Postnatal rubella is usually a mild disease with diffuse erythematous maculopapular rash, lymphademopathy (commonly sub-occipital, postauricular and cervical) and fever. Adults sometimes have a prodromal illness of headache, malaise, coryza, and conjunctivitis. Arthralgias and arthritis can frequently complicate postnatal rubella, especially in females. Leukopenia and thrombocytopenia can occur, but hemorrhagic complications are rare. -
Rapid Host Immune Response and Viral Dynamics in Herpes Simplex Virus-2 Infection
PERSPECTIVE Rapid host immune response and viral dynamics in herpes simplex virus-2 infection Joshua T Schiffer1,2 & Lawrence Corey1–3 Herpes simplex virus-2 (HSV-2) is periodically shed throughout rate of HIV five- to tenfold14. Men and women who have acquired the human genital tract. Although a high viral load correlates HSV-2 have a two- to threefold increased risk of HIV-1 infection15,16. with the development of genital ulcers, shedding also In countries in which sexually active adults have a high prevalence commonly occurs even when ulcers are absent, allowing for of HSV-2 infection, or in subpopulations such as men who have silent transmission during coitus and contributing to high sex with men where HSV-2 infection is common, HSV-2 is a major seroprevalence of HSV-2 worldwide. Frequent viral reactivation epidemiological driver of HIV-1 epidemics16–18. occurs within ganglia despite diverse and complementary Here we describe how frequent reactivation and release of HSV-2 host and viral mechanisms that predispose toward latency, from latency within neurons, as well as highly dynamic interactions suggesting that viral replication may be constantly occurring between replicating HSV-2 and the host cell-mediated immune in a small minority of neurons at these sites. Within genital response in genital tissues, contribute to observed disease manifes- mucosa, the in vivo expansion and clearance rates of HSV-2 are tations, high global prevalence and enhanced HIV acquisition risk. extremely rapid. Resident dendritic cells and memory HSV-2 We also highlight the unique challenges that the kinetics of these specific T cells persist at prior sites of genital tract reactivation viral-host interactions pose for antiviral and vaccine development.