(Hebden Bridge, West Yorkshire) Using Nextgen DNA Sequencing of Soil Samples
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Clavulinopsis Helvola (Pers.) Corner, Monograph of Clavaria and Allied Genera (Annals of Botany Memoirs No
© Miguel Ángel Ribes Ripoll [email protected] Condiciones de uso Clavulinopsis helvola (Pers.) Corner, Monograph of Clavaria and allied Genera (Annals of Botany Memoirs No. 1): 372 (1950) COROLOGíA Registro/Herbario Fecha Lugar Hábitat MAR-111009 11 11/10/2009 Colllado de las Tres Cruces, Santa Orosia, En un talud en bosque mixto de Leg.: Fermín Pancorbo, Juan Carlos Campos, Juan Yebra de Basa (Huesca) haya (Fagus sylvatica) y abeto Carlos Zamora, Luis Rubio, Jorge Hernanz, Félix 1528 m 30T YN2510 blanco (Abies alba) Mateo, Eliseo Vernis, Santiago García Det.: Miguel Á. Ribes TAXONOMíA Basiónimo: Clavaria helvola Pers. [as 'helveola'], Comm. fung. clav. (Lipsiae): 69 (1797) Citas en listas publicadas: Index of Fungi 2: 19. Posición en la clasificación: Clavariaceae, Agaricales, Agaricomycetidae, Agaricomycetes, Basidiomycota, Fungi Sinónimos: o Clavaria dissipabilis Britzelm., Ber. naturw. Augsburg 29: 289 (1887) o Clavaria flammans Berk., J. Linn. Soc., Bot. 14(1): 350 (1873) o Clavaria helvola Pers., Comm. fung. clav. (Lipsiae): 69 (1797) subsp. Helvola o Clavaria inaequalis sensu auct.; fide Checklist of Basidiomycota of Great Britain and Ireland (2005) o Clavaria inaequalis var. helvola (Pers.) Fr., Elench. fung. (Greifswald) 1: 232 (1828) o Clavaria similis Boud. & Pat., J. Bot. Morot 2: 406 (1888) o Ramariopsis helvola (Pers.) R.H. Petersen, Mycologia 70(3): 668 (1978) DESCRIPCIÓN MACRO Basidioma filiforme, cilíndrico-claviforme o cilíndrico-aplanado, normalmente sinuoso y no ramificado, pero a veces con una pequeña ramificación en el ápice, a veces ligeramente surcado, hasta de 6-7 cm de alto, de color amarillo-anaranjado vivo o pálido, mate, cubierto por una pruina más clara en ejemplares jóvenes, ápice redondeado que se vuelve pardo al envejecer. -
Major Clades of Agaricales: a Multilocus Phylogenetic Overview
Mycologia, 98(6), 2006, pp. 982–995. # 2006 by The Mycological Society of America, Lawrence, KS 66044-8897 Major clades of Agaricales: a multilocus phylogenetic overview P. Brandon Matheny1 Duur K. Aanen Judd M. Curtis Laboratory of Genetics, Arboretumlaan 4, 6703 BD, Biology Department, Clark University, 950 Main Street, Wageningen, The Netherlands Worcester, Massachusetts, 01610 Matthew DeNitis Vale´rie Hofstetter 127 Harrington Way, Worcester, Massachusetts 01604 Department of Biology, Box 90338, Duke University, Durham, North Carolina 27708 Graciela M. Daniele Instituto Multidisciplinario de Biologı´a Vegetal, M. Catherine Aime CONICET-Universidad Nacional de Co´rdoba, Casilla USDA-ARS, Systematic Botany and Mycology de Correo 495, 5000 Co´rdoba, Argentina Laboratory, Room 304, Building 011A, 10300 Baltimore Avenue, Beltsville, Maryland 20705-2350 Dennis E. Desjardin Department of Biology, San Francisco State University, Jean-Marc Moncalvo San Francisco, California 94132 Centre for Biodiversity and Conservation Biology, Royal Ontario Museum and Department of Botany, University Bradley R. Kropp of Toronto, Toronto, Ontario, M5S 2C6 Canada Department of Biology, Utah State University, Logan, Utah 84322 Zai-Wei Ge Zhu-Liang Yang Lorelei L. Norvell Kunming Institute of Botany, Chinese Academy of Pacific Northwest Mycology Service, 6720 NW Skyline Sciences, Kunming 650204, P.R. China Boulevard, Portland, Oregon 97229-1309 Jason C. Slot Andrew Parker Biology Department, Clark University, 950 Main Street, 127 Raven Way, Metaline Falls, Washington 99153- Worcester, Massachusetts, 01609 9720 Joseph F. Ammirati Else C. Vellinga University of Washington, Biology Department, Box Department of Plant and Microbial Biology, 111 355325, Seattle, Washington 98195 Koshland Hall, University of California, Berkeley, California 94720-3102 Timothy J. -
LUNDY FUNGI: FURTHER SURVEYS 2004-2008 by JOHN N
Journal of the Lundy Field Society, 2, 2010 LUNDY FUNGI: FURTHER SURVEYS 2004-2008 by JOHN N. HEDGER1, J. DAVID GEORGE2, GARETH W. GRIFFITH3, DILUKA PEIRIS1 1School of Life Sciences, University of Westminster, 115 New Cavendish Street, London, W1M 8JS 2Natural History Museum, Cromwell Road, London, SW7 5BD 3Institute of Biological Environmental and Rural Sciences, University of Aberystwyth, SY23 3DD Corresponding author, e-mail: [email protected] ABSTRACT The results of four five-day field surveys of fungi carried out yearly on Lundy from 2004-08 are reported and the results compared with the previous survey by ourselves in 2003 and to records made prior to 2003 by members of the LFS. 240 taxa were identified of which 159 appear to be new records for the island. Seasonal distribution, habitat and resource preferences are discussed. Keywords: Fungi, ecology, biodiversity, conservation, grassland INTRODUCTION Hedger & George (2004) published a list of 108 taxa of fungi found on Lundy during a five-day survey carried out in October 2003. They also included in this paper the records of 95 species of fungi made from 1970 onwards, mostly abstracted from the Annual Reports of the Lundy Field Society, and found that their own survey had added 70 additional records, giving a total of 156 taxa. They concluded that further surveys would undoubtedly add to the database, especially since the autumn of 2003 had been exceptionally dry, and as a consequence the fruiting of the larger fleshy fungi on Lundy, especially the grassland species, had been very poor, resulting in under-recording. Further five-day surveys were therefore carried out each year from 2004-08, three in the autumn, 8-12 November 2004, 4-9 November 2007, 3-11 November 2008, one in winter, 23-27 January 2006 and one in spring, 9-16 April 2005. -
Basidiomycota) in Finland
Mycosphere 7 (3): 333–357(2016) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/7/3/7 Copyright © Guizhou Academy of Agricultural Sciences Extensions of known geographic distribution of aphyllophoroid fungi (Basidiomycota) in Finland Kunttu P1, Kulju M2, Kekki T3, Pennanen J4, Savola K5, Helo T6 and Kotiranta H7 1University of Eastern Finland, School of Forest Sciences, P.O. Box 111, FI-80101 Joensuu, Finland 2Biodiversity Unit P.O. Box 3000, FI-90014 University of Oulu, Finland 3Jyväskylä University Museum, Natural History Section, P.O. BOX 35, FI-40014 University of Jyväskylä, Finland 4Pentbyntie 1 A 2, FI-10300 Karjaa, Finland 5The Finnish Association for Nature Conservation, Itälahdenkatu 22 b A, FI-00210 Helsinki, Finland 6Erätie 13 C 19, FI-87200 Kajaani, Finland 7Finnish Environment Institute, P.O. Box 140, FI-00251 Helsinki, Finland Kunttu P, Kulju M, Kekki T, Pennanen J, Savola K, Helo T, Kotiranta H 2016 – Extensions of known geographic distribution of aphyllophoroid fungi (Basidiomycota) in Finland. Mycosphere 7(3), 333–357, Doi 10.5943/mycosphere/7/3/7 Abstract This article contributes the knowledge of Finnish aphyllophoroid funga with nationally or regionally new species, and records of rare species. Ceriporia bresadolae, Clavaria tenuipes and Renatobasidium notabile are presented as new aphyllophoroid species to Finland. Ceriporia bresadolae and R. notabile are globally rare species. The records of Ceriporia aurantiocarnescens, Crustomyces subabruptus, Sistotrema autumnale, Trechispora elongata, and Trechispora silvae- ryae are the second in Finland. New records (or localities) are provided for 33 species with no more than 10 records in Finland. In addition, 76 records of aphyllophoroid species are reported as new to some subzones of the boreal vegetation zone in Finland. -
New Species and New Records of Clavariaceae (Agaricales) from Brazil
Phytotaxa 253 (1): 001–026 ISSN 1179-3155 (print edition) http://www.mapress.com/j/pt/ PHYTOTAXA Copyright © 2016 Magnolia Press Article ISSN 1179-3163 (online edition) http://dx.doi.org/10.11646/phytotaxa.253.1.1 New species and new records of Clavariaceae (Agaricales) from Brazil ARIADNE N. M. FURTADO1*, PABLO P. DANIËLS2 & MARIA ALICE NEVES1 1Laboratório de Micologia−MICOLAB, PPG-FAP, Departamento de Botânica, Universidade Federal de Santa Catarina, Florianópolis, Brazil. 2Department of Botany, Ecology and Plant Physiology, Ed. Celestino Mutis, 3a pta. Campus Rabanales, University of Córdoba. 14071 Córdoba, Spain. *Corresponding author: Email: [email protected] Phone: +55 83 996110326 ABSTRACT Fourteen species in three genera of Clavariaceae from the Atlantic Forest of Brazil are described (six Clavaria, seven Cla- vulinopsis and one Ramariopsis). Clavaria diverticulata, Clavulinopsis dimorphica and Clavulinopsis imperata are new species, and Clavaria gibbsiae, Clavaria fumosa and Clavulinopsis helvola are reported for the first time for the country. Illustrations of the basidiomata and the microstructures are provided for all taxa, as well as SEM images of ornamented basidiospores which occur in Clavulinopsis helvola and Ramariopsis kunzei. A key to the Clavariaceae of Brazil is also included. Key words: clavarioid; morphology; taxonomy Introduction Clavariaceae Chevall. (Agaricales) comprises species with various types of basidiomata, including clavate, coralloid, resupinate, pendant-hydnoid and hygrophoroid forms (Hibbett & Thorn 2001, Birkebak et al. 2013). The family was first proposed to accommodate mostly saprophytic club and coral-like fungi that were previously placed in Clavaria Vaill. ex. L., including species that are now in other genera and families, such as Clavulina J.Schröt. -
Entoloma Conferendum (Laborecká Vrchovina Mts., Osadné; See P.11) ISSN 1335-7670 Catathelasma 9: 1-36 (2007) No. 9
a journal on biodiversity, taxonomy and conservation of fungi No. 9 December 2007 Entoloma bloxami (Laborecká vrchovina Mts., Vyšná Jablonka; see p. 11) Entoloma conferendum (Laborecká vrchovina Mts., Osadné; see p.11) Entoloma sericeum (Laborecká vrchovina Mts., Vyšná Jablonka; see p. 11) ISSN 1335-7670 Catathelasma 9: 1-36 (2007) Squamanita schreieri Vesiculomyces citrinus (Podunajská rovina Lowland, Bratislava; see p. 5) (Podunajská rovina Lowland, Bratislava – Rusovce; see p. 21) Agaricus decussatus subsp. illustris Vesiculomyces citrinus, youger fruitbody (Kalchbrenner, Icones selectae Hymenomycetum Hungariae; see p. 28) (Belianske Tatry Mts., Tatranská kotlina; see p. 21) 3 Catathelasma 9 December 2007 TABLE OF CONTENTS BIODIVERSITY OF FUNGI Rare record of Squamanita schreieri Ján Červenka and Ivona Kautmanová 5 Diversity of Entoloma species in Slovak grasslands. 1 Slavomír Adamčík 11 Vesiculomyces citrinus in Slovakia Ladislav Hagara 21 Non-lichenized fungal taxa described from Slovakia. Part 2 Pavel Lizoň 27 Instructions to authors 4 Editor’s acknowledgements 4 Book notices Pavel Lizoň, Ladislav Hagara 10, 20, 24, 26, 33, 34 PHOTOGRAPHS Entoloma conferendum Soňa Ripková [1] Squamanita schreieri Božena Kuzmová [2] Agaricus decussatus subsp. illustris Carl Kalchbrenner [2] Vesiculomyces citrinus Ladislav Hagara [35] Vesiculomyces citrinus Ladislav Hagara [35] Entoloma bloxami Soňa Ripková [36] Entoloma sericeum Soňa Ripková [36] visit our web site at fungi.sav.sk Catathelasma is edited by Pavel Lizoň and published by the Slovak Mycological Society with the financial support of the Slovak Academy of Sciences. Permit of the Ministry of Culture of the Slovak rep. no. 2470/2001, ISSN 1335-7670. 4 Catathelasma 9 December 2007 Editor's Acknowledgements The Editor express his appreciation to Drs. -
Forest Fungi in Ireland
FOREST FUNGI IN IRELAND PAUL DOWDING and LOUIS SMITH COFORD, National Council for Forest Research and Development Arena House Arena Road Sandyford Dublin 18 Ireland Tel: + 353 1 2130725 Fax: + 353 1 2130611 © COFORD 2008 First published in 2008 by COFORD, National Council for Forest Research and Development, Dublin, Ireland. All rights reserved. No part of this publication may be reproduced, or stored in a retrieval system or transmitted in any form or by any means, electronic, electrostatic, magnetic tape, mechanical, photocopying recording or otherwise, without prior permission in writing from COFORD. All photographs and illustrations are the copyright of the authors unless otherwise indicated. ISBN 1 902696 62 X Title: Forest fungi in Ireland. Authors: Paul Dowding and Louis Smith Citation: Dowding, P. and Smith, L. 2008. Forest fungi in Ireland. COFORD, Dublin. The views and opinions expressed in this publication belong to the authors alone and do not necessarily reflect those of COFORD. i CONTENTS Foreword..................................................................................................................v Réamhfhocal...........................................................................................................vi Preface ....................................................................................................................vii Réamhrá................................................................................................................viii Acknowledgements...............................................................................................ix -
Clavaria Miniata) Flame Fungus
A LITTLE BOOK OF CORALS Pat and Ed Grey Reiner Richter Ramariopsis pulchella Revision 3 (2018) Ramaria flaccida De’ana Williams 2 Introduction This booklet illustrates some of the Coral Fungi found either on FNCV Fungi Forays or recorded for Victoria. Coral fungi are noted for their exquisite colouring – every shade of white, cream, grey, blue, purple, orange and red - found across the range of species. Each description page consists of a photo (usually taken by a group member) and brief notes to aid identification. The corals are listed alphabetically by genus and species and a common name has been included. In this revision five species have been added: Clavicorona taxophila, Clavulina tasmanica, Ramaria pyrispora, R. watlingii and R. samuelsii. A field description sheet is available as a separate PDF. Coral Fungi are so-called because the fruit-bodies resemble marine corals. Some have intricate branching, while others are bushier with ‘florets’ like a cauliflower or broccolini. They also include those species that have simple, club-shaped fruit-bodies. Unlike fungi such as Agarics that have gills and Boletes that have pores, the fertile surface bearing the spores of coral fungi is the external surface of the upper branches. All species of Artomyces, Clavaria, Clavulina, Clavulinopsis, Multiclavula, Ramariopsis and Tremellodendropsis have a white spore print while Ramaria species have a yellow to yellow-brown spore print, which is sometimes seen when the mature spores dust the branches. Most species grow on the ground except for two Peppery Corals Artomyces species and Ramaria ochracea that grow on fallen wood. Ramaria filicicola grows on woody litter and Tree-fern stems. -
A MYCOLEGIUM of LITERATURE the New North America Mushroom Species of 2015 Else C
Cortinarius vanduzerensis, from the type locality in Oregon, unmistakable with its and the species, growing with slimy dark brown cap, Pseudotsuga, Tsuga and Abies in and slimy lilac-purple Oregon, Washington, and British stem, right? Alas, it is Columbia has been described now postulated that this as Cortinarius seidliae. Images species is only known courtesy of M. G. Wood and N. Siegel. A MYCOLEGIUM OF LITERATURE The new North America mushroom species of 2015 Else C. Vellinga round 30 new North American species of macrofungi they are in general very difficult to recognize anyway; without saw the light in 2015 – leaving 2014 as the top year pictures for comparison it is just impossible. with 58 species. In 2015, 14 new Cortinarius species, To speed up the description of new species, several Aan Entoloma, one wax cap, two Russulas, one bolete, several journals now offer the opportunity to publish single species polypores, two Craterellus species, one Geastrum, an descriptions as part of a much bigger article in which many Auricularia, and a number of Tremella species were presented different authors each describe only one or a few new species. as new, plus two Otidea species representing the Ascomycota. Several of the new Cortinarius and Russula species were As in 2014, many of the new taxa were published in Index published as part of these big community efforts. For the Fungorum, without any supporting illustrations and without individual author this is advantageous, as there will be more phylogenetic trees showing the placement of the new species. citations of the whole article than for a single species article. -
Chemical Elements in Ascomycetes and Basidiomycetes
Chemical elements in Ascomycetes and Basidiomycetes The reference mushrooms as instruments for investigating bioindication and biodiversity Roberto Cenci, Luigi Cocchi, Orlando Petrini, Fabrizio Sena, Carmine Siniscalco, Luciano Vescovi Editors: R. M. Cenci and F. Sena EUR 24415 EN 2011 1 The mission of the JRC-IES is to provide scientific-technical support to the European Union’s policies for the protection and sustainable development of the European and global environment. European Commission Joint Research Centre Institute for Environment and Sustainability Via E.Fermi, 2749 I-21027 Ispra (VA) Italy Legal Notice Neither the European Commission nor any person acting on behalf of the Commission is responsible for the use which might be made of this publication. Europe Direct is a service to help you find answers to your questions about the European Union Freephone number (*): 00 800 6 7 8 9 10 11 (*) Certain mobile telephone operators do not allow access to 00 800 numbers or these calls may be billed. A great deal of additional information on the European Union is available on the Internet. It can be accessed through the Europa server http://europa.eu/ JRC Catalogue number: LB-NA-24415-EN-C Editors: R. M. Cenci and F. Sena JRC65050 EUR 24415 EN ISBN 978-92-79-20395-4 ISSN 1018-5593 doi:10.2788/22228 Luxembourg: Publications Office of the European Union Translation: Dr. Luca Umidi © European Union, 2011 Reproduction is authorised provided the source is acknowledged Printed in Italy 2 Attached to this document is a CD containing: • A PDF copy of this document • Information regarding the soil and mushroom sampling site locations • Analytical data (ca, 300,000) on total samples of soils and mushrooms analysed (ca, 10,000) • The descriptive statistics for all genera and species analysed • Maps showing the distribution of concentrations of inorganic elements in mushrooms • Maps showing the distribution of concentrations of inorganic elements in soils 3 Contact information: Address: Roberto M. -
Two New Species of Dermoloma from India
Phytotaxa 177 (4): 239–243 ISSN 1179-3155 (print edition) www.mapress.com/phytotaxa/ PHYTOTAXA Copyright © 2014 Magnolia Press Article ISSN 1179-3163 (online edition) http://dx.doi.org/10.11646/phytotaxa.177.4.5 Two new species of Dermoloma from India K. N. ANIL RAJ, K. P. DEEPNA LATHA, RAIHANA PARAMBAN & PATINJAREVEETTIL MANIMOHAN* Department of Botany, University of Calicut, Kerala, 673 635, India *Corresponding author: [email protected] Abstract Two new species of Dermoloma, Dermoloma indicum and Dermoloma keralense, are documented from Kerala State, India, based on morphology. Comprehensive descriptions, photographs, and comparison with phenetically similar species are provided. Key words: Agaricales, Basidiomycota, biodiversity, taxonomy Introduction Dermoloma J. E. Lange (1933: 12) ex Herink (1958: 62) (Agaricales, Basidiomycota) is a small genus of worldwide distribution with around 24 species names (excluding synonyms) listed in Species Fungorum (www.speciesfungorum. org). The genus is characterized primarily by the structure of the pileipellis, which is a pluristratous hymeniderm made up of densely packed, subglobose or broadly clavate cells (Arnolds 1992, 1993, 1995). Although Dermoloma is traditionally considered as belonging to the Tricholomataceae, Kropp (2008) found that D. inconspicuum Dennis (1961: 78), based on molecular data, had phylogenetic affinities to the Agaricaceae. Most of the known species are recorded from the temperate regions. So far, only a single species of Dermoloma has been reported from India (Manimohan & Arnolds 1998). During our studies on the agarics of Kerala State, India, we came across two remarkable species of Dermoloma that were found to be distinct from all other previously reported species of the genus. They are herein formally described as new. -
Habitat Specificity of Selected Grassland Fungi in Norway John Bjarne Jordal1, Marianne Evju2, Geir Gaarder3 1Biolog J.B
Habitat specificity of selected grassland fungi in Norway John Bjarne Jordal1, Marianne Evju2, Geir Gaarder3 1Biolog J.B. Jordal, Auragata 3, NO-6600 Sunndalsøra 2Norwegian Institute for Nature Research, Gaustadalléen 21, NO-0349 Oslo 3Miljøfaglig Utredning, Gunnars veg 10, NO-6610 Tingvoll Corresponding author: er undersøkt når det gjelder habitatspesifisitet. [email protected] 70 taksa (53%) har mindre enn 10% av sine funn i skog, mens 23 (17%) har mer enn 20% Norsk tittel: Habitatspesifisitet hos utvalgte av funnene i skog. De som har høyest frekvens beitemarkssopp i Norge i skog i Norge er for det meste også vanligst i skog i Sverige. Jordal JB, Evju M, Gaarder G, 2016. Habitat specificity of selected grassland fungi in ABSTRACT Norway. Agarica 2016, vol. 37: 5-32. 132 taxa of fungi regularly found in semi- natural grasslands from the genera Camaro- KEY WORDS phyllopsis, Clavaria, Clavulinopsis, Dermo- Grassland fungi, seminatural grasslands, loma, Entoloma, Geoglossum, Hygrocybe, forests, other habitats, Norway Microglossum, Porpoloma, Ramariopsis and Trichoglossum were selected. Their habitat NØKKELORD specificity was investigated based on 39818 Beitemarkssopp, seminaturlige enger, skog, records from Norway. Approximately 80% of andre habitater, Norge the records were from seminatural grasslands, ca. 10% from other open habitats like parks, SAMMENDRAG gardens and road verges, rich fens, coastal 132 taksa av sopp med regelmessig fore- heaths, open rocks with shallow soil, waterfall komst i seminaturlig eng av slektene Camaro- meadows, scree meadows and alpine habitats, phyllopsis, Clavaria, Clavulinopsis, Dermo- while 13% were found in different forest loma, Entoloma, Geoglossum, Hygrocybe, types (some records had more than one Microglossum, Porpoloma, Ramariopsis og habitat type, the sum therefore exceeds 100%).