Reappraisal of the Genus Alternariaster (Dothideomycetes)
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I Sunflower (Helianthus Annuus L.) Is the Most Important Oilseed Crop In
SUMMARY Sunflower (Helianthus annuus L.) is the most important oilseed crop in South Africa at present and is grown in all summer rainfall areas. Sunflower seed oil is preferred over soybean and rapeseed oil because of its high quality and high poly-unsaturated fatty acids content that helps avoid the accumulation of cholesterol in the blood (Ward et al., 1985). A field trip was taken to sunflower fields in Greytown, Northern Kwa-Zulu Natal in early March 2010 during the warm and rainy summer season. Alternaria helianthicola Rao and Rajagopalan was consistently isolated from diseased plant material. Alternaria helianthicola has not previously been recorded on sunflower in South Africa. The pathogenicity of was A. helianthicola confirmed on sunflower plants using Koch’s postulates. Standard germination and seed health tests were conducted for thirteen sunflower seed lots from various sunflowers farms and companies of South Africa. Germination percentages ranged from 60 to 94% and germinated seedlings of the thirteen seed lots often showed seedling blight. Seed infection ranged from 18 to 98% caused by various small-spored Alternariaspecies. Seed infection did not severely influence seed germination and the Alternaria species may either cause a quiescent infection of the seeds or theAlternaria species may be mere saprobes and contaminants of the seed coats that do not cause disease. Seed component plating tests showed that the Alternaria species were more prevalent in the embryo and cotyledon than on the seed coats. Morphological characterization of these small-spored Alternaria species has been found to be unreliable due to the overlap in cultural characteristics between the various species. -
Neoleptosphaeria Jonesii Sp. Nov., a Novel Saprobic Sexual Species, in Leptosphaeriaceae
Mycosphere 7 (9): 1368–1377 (2016) www.mycosphere.org ISSN 2077 7019 Article – special issue Doi 10.5943/mycosphere/7/9/10 Copyright © Guizhou Academy of Agricultural Sciences Neoleptosphaeria jonesii sp. nov., a novel saprobic sexual species, in Leptosphaeriaceae Wanasinghe DN1,2, Camporesi E3,4 and Hu DM1 1 College of Bioscience and Bioengineering, Jiangxi Agricultural University, Nanchang 330045, China 2 Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand 3 Società per gli Studi Naturalistici della Romagna, C.P. 144, Bagnacavallo (RA), Italy 4 A.M.B. Gruppo Micologico Forlivese “Antonio Cicognani”, Via Roma 18, Forlì, Italy; A.M.B. Circolo Micologico “Giovanni Carini”, C.P. 314, Brescia, Italy Wanasinghe DN, Camporesi E, Hu DM 2016 – Neoleptosphaeria jonesii sp. nov., a novel saprobic sexual species, in Leptosphaeriaceae. Mycosphere 7 (9), 1368–1377, Doi 10.5943/mycosphere/7/9/10 Abstract Neoleptosphaeria is a genus of ascomycetes known only from its asexual morphs (coelomycetous) and its species have saprobic and / or endophytic life modes. We obtained LSU, SSU and ITS sequence data from a single spore isolation of a freshly collected specimen. A phylogeny of representative strains of the genus and other taxa in Leptosphaeriaceae was obtained. Neoleptosphaeria proved to be strongly monophyletic but related to other genera in Leptosphaeriaceae. Phylogenetic analyses place our new isolate in a strongly supported clade with the generic type of Neoleptosphaeria (N. rubefaciens). The sexual morph of Neoleptosphaeria is therefore established and includes the first genus with muriform ascospores in Leptosphaeriaceae. Keywords – asexual morph – dictyospores – Italy – phylogeny – taxonomy Introduction Barr (1987) established the family Leptosphaeriaceae species with having a conical or globose ascomata, narrow asci with thin walls and coelomycetous asexual morphs in the order Pleosporales. -
Fungal Flora of Korea
Fungal Flora of Korea Volume 1, Number 2 Ascomycota: Dothideomycetes: Pleosporales: Pleosporaceae Alternaria and Allied Genera 2015 National Institute of Biological Resources Ministry of Environment Fungal Flora of Korea Volume 1, Number 2 Ascomycota: Dothideomycetes: Pleosporales: Pleosporaceae Alternaria and Allied Genera Seung Hun Yu Chungnam National University Fungal Flora of Korea Volume 1, Number 2 Ascomycota: Dothideomycetes: Pleosporales: Pleosporaceae Alternaria and Allied Genera Copyright ⓒ 2015 by the National Institute of Biological Resources Published by the National Institute of Biological Resources Environmental Research Complex, Hwangyeong-ro 42, Seo-gu Incheon, 404-708, Republic of Korea www.nibr.go.kr All rights reserved. No part of this book may be reproduced, stored in a retrieval system, or transmitted, in any form or by any means, electronic, mechanical, photocopying, recording, or otherwise, without the prior permission of the National Institute of Biological Resources. ISBN : 9788968111259-96470 Government Publications Registration Number 11-1480592-000905-01 Printed by Junghaengsa, Inc. in Korea on acid-free paper Publisher : Kim, Sang-Bae Author : Seung Hun Yu Project Staff : Youn-Bong Ku, Ga Youn Cho, Eun-Young Lee Published on March 1, 2015 The Flora and Fauna of Korea logo was designed to represent six major target groups of the project including vertebrates, invertebrates, insects, algae, fungi, and bacteria. The book cover and the logo were designed by Jee-Yeon Koo. Preface The biological resources represent all the composition of organisms and genetic resources which possess the practical and potential values essential for human lives, and occupies a firm position in producing highly value-added products such as new breeds, new materials and new drugs as a means of boosting the national competitiveness. -
Proposed Generic Names for Dothideomycetes
Naming and outline of Dothideomycetes–2014 Nalin N. Wijayawardene1, 2, Pedro W. Crous3, Paul M. Kirk4, David L. Hawksworth4, 5, 6, Dongqin Dai1, 2, Eric Boehm7, Saranyaphat Boonmee1, 2, Uwe Braun8, Putarak Chomnunti1, 2, , Melvina J. D'souza1, 2, Paul Diederich9, Asha Dissanayake1, 2, 10, Mingkhuan Doilom1, 2, Francesco Doveri11, Singang Hongsanan1, 2, E.B. Gareth Jones12, 13, Johannes Z. Groenewald3, Ruvishika Jayawardena1, 2, 10, James D. Lawrey14, Yan Mei Li15, 16, Yong Xiang Liu17, Robert Lücking18, Hugo Madrid3, Dimuthu S. Manamgoda1, 2, Jutamart Monkai1, 2, Lucia Muggia19, 20, Matthew P. Nelsen18, 21, Ka-Lai Pang22, Rungtiwa Phookamsak1, 2, Indunil Senanayake1, 2, Carol A. Shearer23, Satinee Suetrong24, Kazuaki Tanaka25, Kasun M. Thambugala1, 2, 17, Saowanee Wikee1, 2, Hai-Xia Wu15, 16, Ying Zhang26, Begoña Aguirre-Hudson5, Siti A. Alias27, André Aptroot28, Ali H. Bahkali29, Jose L. Bezerra30, Jayarama D. Bhat1, 2, 31, Ekachai Chukeatirote1, 2, Cécile Gueidan5, Kazuyuki Hirayama25, G. Sybren De Hoog3, Ji Chuan Kang32, Kerry Knudsen33, Wen Jing Li1, 2, Xinghong Li10, ZouYi Liu17, Ausana Mapook1, 2, Eric H.C. McKenzie34, Andrew N. Miller35, Peter E. Mortimer36, 37, Dhanushka Nadeeshan1, 2, Alan J.L. Phillips38, Huzefa A. Raja39, Christian Scheuer19, Felix Schumm40, Joanne E. Taylor41, Qing Tian1, 2, Saowaluck Tibpromma1, 2, Yong Wang42, Jianchu Xu3, 4, Jiye Yan10, Supalak Yacharoen1, 2, Min Zhang15, 16, Joyce Woudenberg3 and K. D. Hyde1, 2, 37, 38 1Institute of Excellence in Fungal Research and 2School of Science, Mae Fah Luang University, -
Università Degli Studi Di Bologna Alma Mater Studiorum
Università degli Studi di Bologna Alma Mater Studiorum Ph.D. in Plant Pathology - AGR/12 XXIII COURSE Faculty of Agricultural Science Department of Food Improvement and Protection Study of Italian isolates of Alternaria spp.: molecular and morphological characterization and pathogenesis on apple tree CANDIDATE TUTOR: Dott.ssa Francesca Rotondo Prof. Agostino Brunelli COORDINATOR Prof. Paolo Bertolini Keywords: Alternaria spp., phylogenesis, fingerprinting, pathogenesis 2011 1 2 1. Summary In 1999, a symptomatic disease was reported among a number of apple tree orchards (Golden cultivars) in North Italy (Trentino Alto Adige region) (Marshall et al., 2004, and Marshall et al., 2006). By 2002 the disease was found in an area 10 times larger than the initial infection sites and had started attacking the Gala variety of apple, broadening to Veneto, Pidemont (Cuneo and Alessandria) (Ortalda, 2006) and some areas of Emilia Romagna (Ferrara and Ravenna with spots present only on leaf) (Antonacci and Montuschi, 2006). Originally, the disease was attributed to a lack of microelements or a nutritional disequilibrium. In 2003, the Experimental Centre of Laimburg (BZ) demonstrated the pathogenicity of Alternaria isolates on healthy apple foliar tissues and proposed a pathotype of Alternaria alternata as the causal agent of the disease (Gobber et al., 2004 and Marshall et al., 2006). The severe damages inflicted on orchards been the impetus to more deeply investigate the diversity and spatial distribution of Alternaria spp. isolated from these diseased tissues and discover the relationship of the Italian pathogen to the Alternaria alternata mali pathotype, causal agent of the Apple Blotch disease. It was decided to carry out a morphological and molecular characterization of the isolates, evaluating their pathogenicity and, subsequently, combining the collected data to more fully characterize the strains. -
Alternaria Genus and the Diseases Caused to Agricultural and Horticultural Plants
REVIEWS ARTICLES Alternaria Genus and the Diseases Caused to Agricultural and Horticultural Plants Antonia FLOREA1 1 1 Faculty of Agriculture,*, Carmen University PUIA of Agricultural Sciences and Veterinary Medicine of Cluj-Napoca, Calea Mănăștur 3-5, 400372 Cluj-Napoca, Romania *corresponding author: [email protected] Bulletin UASVM series Agriculture 77(2) / 2020 Print ISSN 1843-5246; Electronic ISSN 1843-5386 DOI:10.15835/buasvmcn-agr: 2020.0034 Abstract Alternaria Alternaria This work is a bibliographic approach to the historical and most recent taxonomy on genus. The genus consists largely of etspecies al of saprophytic, endophytic and parasitic fungi. The United States Fungal host index ranks the genus Alternaria on the 10th place based on the number of host plants, with over 4,000 species. Govind . (2016) tells us that most species of this genus are missing the sexual form, with the exception of a few species, which have, in addition to the anamorphic form, the telemorphic form. With the discovery of several species and due to the superficiality of past research, the inclusion of this genus in the taxonomy has become problematic. At the beginning, the Alternariataxonomic classification was performed according to the morphology of the species. This bibliographic approach wants to clarify some of the aspects concerning the old and actual taxonomyet ambiguities al. of Alternaria genus. The method used is consulting the etscientific al. literature. The present reclassification ofet al.the species was performed by analysing the DNA ofAlternaria each species omanensis in 2013 by WoudenbergAlternaria and genus fit the is species in 25 sections. In 2016 Lawrence added 2 other sections and in 2019 Ghafri forms a new section based on the new species . -
Alternaria Redefined
STUDIES IN MYCOLOGY 75: 171–212. Alternaria redefined J.H.C. Woudenberg1,2*, J.Z. Groenewald1, M. Binder1, and P.W. Crous1,2,3 1CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands; 2Wageningen University and Research Centre (WUR), Laboratory of Phytopathology, Droevendaalsesteeg 1, 6708 PB Wageningen, The Netherlands; 3Utrecht University, Department of Biology, Microbiology, Padualaan 8, 3584 CH Utrecht, The Netherlands *Correspondence: Joyce H.C. Woudenberg, [email protected] Abstract: Alternaria is a ubiquitous fungal genus that includes saprobic, endophytic and pathogenic species associated with a wide variety of substrates. In recent years, DNA- based studies revealed multiple non-monophyletic genera within the Alternaria complex, and Alternaria species clades that do not always correlate to species-groups based on morphological characteristics. The Alternaria complex currently comprises nine genera and eight Alternaria sections. The aim of this study was to delineate phylogenetic lineages within Alternaria and allied genera based on nucleotide sequence data of parts of the 18S nrDNA, 28S nrDNA, ITS, GAPDH, RPB2 and TEF1-alpha gene regions. Our data reveal a Pleospora/Stemphylium clade sister to Embellisia annulata, and a well-supported Alternaria clade. The Alternaria clade contains 24 internal clades and six monotypic lineages, the assemblage of which we recognise as Alternaria. This puts the genera Allewia, Brachycladium, Chalastospora, Chmelia, Crivellia, Embellisia, Lewia, Nimbya, Sinomyces, Teretispora, Ulocladium, Undifilum and Ybotromyces in synonymy with Alternaria. In this study, we treat the 24 internal clades in the Alternaria complex as sections, which is a continuation of a recent proposal for the taxonomic treatment of lineages in Alternaria. -
Alternaria Redefined
STUDIEs IN MYCOLOGY 75: 171–212. Alternaria redefined J.H.C. Woudenberg1,2*, J.Z. Groenewald1, M. Binder1, and P.W. Crous1,2,3 1CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands; 2Wageningen University and Research Centre (WUR), Laboratory of Phytopathology, Droevendaalsesteeg 1, 6708 PB Wageningen, The Netherlands; 3Utrecht University, Department of Biology, Microbiology, Padualaan 8, 3584 CH Utrecht, The Netherlands *Correspondence: Joyce H.C. Woudenberg, [email protected] Abstract: Alternaria is a ubiquitous fungal genus that includes saprobic, endophytic and pathogenic species associated with a wide variety of substrates. In recent years, DNA- based studies revealed multiple non-monophyletic genera within the Alternaria complex, and Alternaria species clades that do not always correlate to species-groups based on morphological characteristics. The Alternaria complex currently comprises nine genera and eight Alternaria sections. The aim of this study was to delineate phylogenetic lineages within Alternaria and allied genera based on nucleotide sequence data of parts of the 18S nrDNA, 28S nrDNA, ITS, GAPDH, RPB2 and TEF1-alpha gene regions. Our data reveal a Pleospora/Stemphylium clade sister to Embellisia annulata, and a well-supported Alternaria clade. The Alternaria clade contains 24 internal clades and six monotypic lineages, the assemblage of which we recognise as Alternaria. This puts the genera Allewia, Brachycladium, Chalastospora, Chmelia, Crivellia, Embellisia, Lewia, Nimbya, Sinomyces, Teretispora, Ulocladium, Undifilum and Ybotromyces in synonymy with Alternaria. In this study, we treat the 24 internal clades in the Alternaria complex as sections, which is a continuation of a recent proposal for the taxonomic treatment of lineages in Alternaria. -
Ministerio De Agricultura Y Ganadeña
Av. Eloy Alfaro N30-350 y Amazonas Edificio MAGAP. Piso 9 Código Postal: 170516 Ministerio Teléfono: (593) 2 2567-232 dlreccion@agrocalidad gob.ec de Agricultura y Ganadeña www.agrocalidad.gob.ec RESOLUCiÓN 0122 EL DIRECTOR EJECUTIVO DE LA AGENCIA ECUATORIANA DE ASEGURAMIENTO DE LA CALIDAD DEL AGRO-AGROCALlDAD CONSIDERANDO: Que, el inciso 2 del artículo 400 de la Constitución de la República del Ecuador declara que es de interés público la conservación de la biodiversidad y todos sus componentes, en particular la biodiversidad agrícola y silvestre y el patrimonio genético del país; Que, es deber del Estado mantener al margen cultivos y semillas transgénicas o cultivos genéticamente manipulados, conforme establece el artículo 401 de la Constitución de la República del Ecuador; Que, en el marco de la Organización Mundial del Comercio (OMC), el Acuerdo sobre la Aplicación de Medidas Sanitarias y Fitosanitarias (AMSF), establece que los países miembros tienen derecho a adoptar las medidas sanitarias y fitosanitarias por la autoridad competente, necesarias para proteger la salud y la vida de las personas y de los animales o para preservar los vegetales; Que, el Artículo 12 de la Ley Orgánica de Sanidad Agropecuaria, dispone: "Créase la Agencia de Regulación y Control Fito y Zoosanitario, entidad técnica de derecho público, con personería jurídica, autonomía administrativa y financiera, desconcentrada, con sede en la ciudad de Quito y competencia nacional, adscrita a la Autoridad Agraria Nacional. A esta Agencia le corresponde la regulación -
Restyling Alternaria
Restyling Alternaria Joyce H.C. Woudenberg Thesis committee Promotors Prof. Dr P.W. Crous Professor of Evolutionary Phytopathology Wageningen University Prof. Dr P.J.G.M. de Wit Professor of Phytopathology Wageningen University Co-promotor Dr J.Z. Groenewald Researcher, Evolutionary Phytopathology CBS-KNAW Fungal Biodiversity Centre, Utrecht Other members Dr F.T. Bakker, Wageningen University Dr A.J.M. Debets, Wageningen University Prof. Dr Th.W. Kuyper, Wageningen University Dr J. Woodhall, Food and Environment Research Agency (Fera), UK This research was conducted under the auspices of the Graduate School of Experimental Plant Sciences Restyling Alternaria Joyce H.C. Woudenberg Thesis submitted in fulfilment of the requirements for the degree of doctor at Wageningen University by the authority of the Rector Magnificus Prof. Dr A.P.J. Mol, in the presence of the Thesis Committee appointed by the Academic Board to be defended in public on Thursday 10 September 2015 at 11 a.m. in the Aula. Joyce H.C. Woudenberg Restyling Alternaria, 251 pages. PhD thesis, Wageningen University, Wageningen, NL (2015) With references, with summary in English ISBN 978-94-6257-410-6 CONTENTS Chapter 1 General introduction 7 Chapter 2 Alternaria redefined 19 Chapter 3 Reappraisal of the genus Alternariaster (Dothideomycetes) 79 Chapter 4 Large-spored Alternaria pathogens in section Porri 95 disentangled Chapter 5 Alternaria section Alternaria: species, formae speciales or 161 pathotypes Chapter 6 Diversity and movement of indoor Alternaria alternata 197 across the mainland USA Chapter 7 General discussion 219 Appendix References 230 Summary 243 Acknowledgements 246 Curriculum vitae 248 List of publications 249 Education statement 251 CHAPTER General introduction 1 Chapter 1 GENERAL INTRODUCTION The fungal genus Alternaria is an omnipresent dematiaceous hyphomycete which forms dark- coloured, multicellular conidia (phaeodictyospores). -
Morphological and Molecular Characterization of Aquaticheirospora and Phylogenetics of Massarinaceae (Pleosporales)
Botanical Journal of the Linnean Society, 2007, 155, 283–296. With 4 figures Morphological and molecular characterization of Aquaticheirospora and phylogenetics of Massarinaceae (Pleosporales) RAMPAI KODSUEB1, SAISAMORN LUMYONG1, WAI H. HO2, KEVIN D. HYDE2, ERIC H. C. MCKENZIE3 and RAJESH JEEWON2* 1Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand 2Division of Microbiology, School of Biological Sciences, University of Hong Kong, Pokfulam Road, Hong Kong, China 3Landcare Research, Private Bag 92170, Auckland, New Zealand Received August 2006; accepted for publication May 2007 A morphologically interesting hyphomycete was collected from submerged wood in a stream in Doi Suthep-Pui National Park, Thailand. It is described as Aquaticheirospora lignicola gen. and sp. nov., and is characterized by euseptate conidia with divergent arms, which are vertically inserted in different planes to a basal cell. The genus differs from other chirosporous genera in having synnematous conidioma and conidia that are produced on conidiogenous cells borne at the apices of synnemata. The morphological characterization of this new fungus is reported and compared with similar chirosporous genera. To investigate the teleomorphic and phylogenetic relationships of this new taxon, three different regions of the ribosomal gene [18S rDNA, 28S rDNA, and internal transcribed spacer (ITS) including 5.8S] were sequenced and analysed. The results of phylogenetic analyses based on 18S, 28S, and partial ITS including 5.8S rDNA, employing different tree-making methods, indicate that Aquaticheirospora lignicola is closely related to the ascomycetes family Massarinaceae (Order: Pleosporales). The Massarinaceae as currently circumscribed is monophyletic. Massarina australiensis and M. bipolaris, however, appear to belong to the Lophiostomataceae.