Poster Sessions Posters Session 1 Monday November 3, 2014
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Atg4b Antibody A
Revision 1 C 0 2 - t Atg4B Antibody a e r o t S Orders: 877-616-CELL (2355) [email protected] Support: 877-678-TECH (8324) 9 9 Web: [email protected] 2 www.cellsignal.com 5 # 3 Trask Lane Danvers Massachusetts 01923 USA For Research Use Only. Not For Use In Diagnostic Procedures. Applications: Reactivity: Sensitivity: MW (kDa): Source: UniProt ID: Entrez-Gene Id: WB H M R Endogenous 48 Rabbit Q9Y4P1 23192 Product Usage Information 2. Ohsumi, Y. (2001) Nat Rev Mol Cell Biol 2, 211-6. 3. Kabeya, Y. et al. (2000) EMBO J 19, 5720-8. Application Dilution 4. Kabeya, Y. et al. (2004) J Cell Sci 117, 2805-12. 5. Mariño, G. et al. (2003) J Biol Chem 278, 3671-8. Western Blotting 1:1000 6. Sou, Y.S. et al. (2008) Mol Biol Cell 19, 4762-75. 7. Hemelaar, J. et al. (2003) J Biol Chem 278, 51841-50. Storage 8. Kabeya, Y. et al. (2004) J Cell Sci 117, 2805-12. 9. Tanida, I. et al. (2004) J Biol Chem 279, 36268-76. Supplied in 10 mM sodium HEPES (pH 7.5), 150 mM NaCl, 100 µg/ml BSA and 50% 10. Fujita, N. et al. (2008) Mol Biol Cell 19, 4651-9. glycerol. Store at –20°C. Do not aliquot the antibody. 11. Fujita, N. et al. (2009) Autophagy 5, 88-9. Specificity / Sensitivity Atg4B Antibody detects endogenous levels of total Atg4B protein. This antibody detects a band at ~27 kDa of unknown origin. Species Reactivity: Human, Mouse, Rat Source / Purification Polyclonal antibodies are produced by immunizing animals with a synthetic peptide corresponding to residues surrounding Ser372 of human Atg4B protein. -
Phosphatidylethanolamine Positively Regulates Autophagy and Longevity
Cell Death and Differentiation (2015) 22, 499–508 OPEN & 2015 Macmillan Publishers Limited All rights reserved 1350-9047/15 www.nature.com/cdd Phosphatidylethanolamine positively regulates autophagy and longevity P Rockenfeller1, M Koska1, F Pietrocola2, N Minois3, O Knittelfelder1, V Sica2, J Franz1, D Carmona-Gutierrez1, G Kroemer*,2,4,5,6,7 and F Madeo*,1,8 Autophagy is a cellular recycling program that retards ageing by efficiently eliminating damaged and potentially harmful organelles and intracellular protein aggregates. Here, we show that the abundance of phosphatidylethanolamine (PE) positively regulates autophagy. Reduction of intracellular PE levels by knocking out either of the two yeast phosphatidylserine decarboxylases (PSD) accelerated chronological ageing-associated production of reactive oxygen species and death. Conversely, the artificial increase of intracellular PE levels, by provision of its precursor ethanolamine or by overexpression of the PE-generating enzyme Psd1, significantly increased autophagic flux, both in yeast and in mammalian cell culture. Importantly administration of ethanolamine was sufficient to extend the lifespan of yeast (Saccharomyces cerevisiae), mammalian cells (U2OS, H4) and flies (Drosophila melanogaster). We thus postulate that the availability of PE may constitute a bottleneck for functional autophagy and that organismal life or healthspan could be positively influenced by the consumption of ethanolamine-rich food. Cell Death and Differentiation (2015) 22, 499–508; doi:10.1038/cdd.2014.219; published online 9 January 2015 Phosphatidylethanolamine (PE) is a phospholipid found in all linked to ageing. Autophagy mainly differs from the proteaso- living organisms. Together with phosphatidylcholine (PC), mal pathway, the other major cellular degradation mechanism, phosphatidylserine (PS) and phosphatidylinositol (PI), PE in two aspects. -
A Brief History of CINVESTAV, Merida Unit, in Yucatan, Mexico Ernesto A
Gulf of Mexico Science Volume 28 Article 3 Number 1 Number 1/2 (Combined Issue) 2010 A Brief History of CINVESTAV, Merida Unit, in Yucatan, Mexico Ernesto A. Chávez Centro Interdisciplinario de Ciencias Marinas, Mexico DOI: 10.18785/goms.2801.03 Follow this and additional works at: https://aquila.usm.edu/goms Recommended Citation Chávez, E. A. 2010. A Brief History of CINVESTAV, Merida Unit, in Yucatan, Mexico. Gulf of Mexico Science 28 (1). Retrieved from https://aquila.usm.edu/goms/vol28/iss1/3 This Article is brought to you for free and open access by The Aquila Digital Community. It has been accepted for inclusion in Gulf of Mexico Science by an authorized editor of The Aquila Digital Community. For more information, please contact [email protected]. Chávez: A Brief History of CINVESTAV, Merida Unit, in Yucatan, Mexico Gulf of Mexico Science, 2010(1–2), pp. 13–16 A Brief History of CINVESTAV, Merida Unit, in Yucatan, Mexico ERNESTO A. CHA´ VEZ his article contains the early history of the fisheries studies. In those days, the British T Merida Unit of the Centro de Investigacio´n Council played a significant role supporting y de Estudios Avanzados (CINVESTAV) research our development, sponsoring some of our young center in Yucatan. The relative isolation of the collaborators to obtain their M.S. and Ph.D. Yucatan and southern Baja California peninsulas degrees in the topics of aquaculture and marine in the early 1970s imposed the need to carry on biology, primarily at the Institute of Aquaculture scientific research activities on the coastline of the University of Sterling, Scotland. -
Cysteine Proteases in Protozoan Parasites
UC San Diego UC San Diego Previously Published Works Title Cysteine proteases in protozoan parasites. Permalink https://escholarship.org/uc/item/6sb6c27b Journal PLoS neglected tropical diseases, 12(8) ISSN 1935-2727 Authors Siqueira-Neto, Jair L Debnath, Anjan McCall, Laura-Isobel et al. Publication Date 2018-08-23 DOI 10.1371/journal.pntd.0006512 Peer reviewed eScholarship.org Powered by the California Digital Library University of California REVIEW Cysteine proteases in protozoan parasites Jair L. Siqueira-Neto1*, Anjan Debnath1, Laura-Isobel McCall1¤, Jean A. Bernatchez1, Momar Ndao2,3, Sharon L. Reed4, Philip J. Rosenthal5 1 Center for Discovery and Innovation in Parasitic Diseases, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, California, United States of America, 2 National Reference Centre for Parasitology, The Research Institute of the McGill University Health Center, Montreal, Canada, 3 Program in Infectious Diseases and Immunity in Global Health, The Research Institute of the McGill University Health Centre, Montreal, Quebec, Canada, 4 Departments of Pathology and Medicine, University of California San Diego School of Medicine, La Jolla, California, United States of America, 5 Department of Medicine, University of California, San Francisco, San Francisco, California, a1111111111 United States of America a1111111111 a1111111111 ¤ Current address: Department of Chemistry and Biochemistry, University of Oklahoma, Norman, Oklahoma, a1111111111 United States of America a1111111111 * [email protected] Abstract OPEN ACCESS Cysteine proteases (CPs) play key roles in the pathogenesis of protozoan parasites, includ- Citation: Siqueira-Neto JL, Debnath A, McCall L-I, ing cell/tissue penetration, hydrolysis of host or parasite proteins, autophagy, and evasion Bernatchez JA, Ndao M, Reed SL, et al. -
Serine Proteases with Altered Sensitivity to Activity-Modulating
(19) & (11) EP 2 045 321 A2 (12) EUROPEAN PATENT APPLICATION (43) Date of publication: (51) Int Cl.: 08.04.2009 Bulletin 2009/15 C12N 9/00 (2006.01) C12N 15/00 (2006.01) C12Q 1/37 (2006.01) (21) Application number: 09150549.5 (22) Date of filing: 26.05.2006 (84) Designated Contracting States: • Haupts, Ulrich AT BE BG CH CY CZ DE DK EE ES FI FR GB GR 51519 Odenthal (DE) HU IE IS IT LI LT LU LV MC NL PL PT RO SE SI • Coco, Wayne SK TR 50737 Köln (DE) •Tebbe, Jan (30) Priority: 27.05.2005 EP 05104543 50733 Köln (DE) • Votsmeier, Christian (62) Document number(s) of the earlier application(s) in 50259 Pulheim (DE) accordance with Art. 76 EPC: • Scheidig, Andreas 06763303.2 / 1 883 696 50823 Köln (DE) (71) Applicant: Direvo Biotech AG (74) Representative: von Kreisler Selting Werner 50829 Köln (DE) Patentanwälte P.O. Box 10 22 41 (72) Inventors: 50462 Köln (DE) • Koltermann, André 82057 Icking (DE) Remarks: • Kettling, Ulrich This application was filed on 14-01-2009 as a 81477 München (DE) divisional application to the application mentioned under INID code 62. (54) Serine proteases with altered sensitivity to activity-modulating substances (57) The present invention provides variants of ser- screening of the library in the presence of one or several ine proteases of the S1 class with altered sensitivity to activity-modulating substances, selection of variants with one or more activity-modulating substances. A method altered sensitivity to one or several activity-modulating for the generation of such proteases is disclosed, com- substances and isolation of those polynucleotide se- prising the provision of a protease library encoding poly- quences that encode for the selected variants. -
Ricarda╎s Doktorarbeit
Insights into membrane binding of PROPPINs and Reconstitution of mammalian autophagic conjugation systems Dissertation for the award of the degree "Doctor rerum naturalium" (Dr. rer. nat.) of the Georg-August-Universität Göttingen in the GGNB program of Biomolecules: Structure - Function - Dynamics of the Georg-August University School of Science (GAUSS) submitted by Ricarda Angela Busse from Leinefelde, now Leinefelde-Worbis, Germany Göttingen, 2012 Members of the Thesis Committee: Dr. Karin Kühnel (1st Reviewer) Department of Neurobiology, Max Planck Institute for Biophysical Chemistry Prof. Dr. Michael Thumm (2nd Reviewer) Department of Biochemistry II, University of Göttingen Prof. Dr. Nils Brose Department of Molecular Neurobiology, Max Planck Institute for Experimental Medicine Date of the oral examination: January 08th, 2013 Declaration of Authorship Declaration of Authorship Hereby, I confirm that I have created this work Insights into membrane binding of PROPPINs and Reconstitution of mammalian autophagic conjugation systems entirely on my own and that I have only used the sources and materials cited. Göttingen, November 14th, 2012 Ricarda Angela Busse V VI VII For Patrick Acknowledgements First and foremost I would like to thank my advisor Dr. Karin Kühnel for giving me the opportunity to do the research in her lab. Without her supervision and training this thesis would not have been possible. Her door was always open for questions and discussions. Moreover, I would like to thank Prof. Dr. Reinhard Jahn for offering the generous financial support during my thesis and for the regular discussions we had about my work during the department seminars. Next, I would like to express my gratitude to my thesis committee formed by Prof. -
Curriculum Vitae
Curriculum Vitae Alonso Contreras-Astorga Personal Information Nationality: Mexican Born: 16th June 1982, Guadalajara, Mexico. E-mail: [email protected] Education 2009 – 2013 Ph. D. in Physics CINVESTAV Centro de Investigación y de Estudios Avanzados del IPN, Physics Department, Mexico City, Mexico. 2005 – 2007 Master in Science CINVESTAV Centro de Investigación y de Estudios Avanzados del IPN, Physics Department, Mexico City, Mexico. 2000 – 2004 BS in Communications and Electronics Engineering Universidad de Guadalajara, Centro Universitario de Ciencias Exactas e Ingenierías, Guadalajara, Jalisco, Mexico. Areas of Specialization Quantum mechanics and mathematical physics. Exact solutions of the Schrödinger and Dirac equations. Coherent states. Publications A Contreras-Astorga, DJ Fernández, J Negro, “Solutions of the Dirac Equation in a Magnetic Field and Intertwining Operators”, SIGMA 8 (2012) 082. A Contreras-Astorga, DJ Fernández, “Coherent States for the Asymmetric Penning Trap”, Int J Theor Phys 50 (2011) 2084-2093. A Contreras-Astorga, DJ Fernández, M Velázquez, “Coherent states for quadratic Hamiltonians”, J Phys A 44 (2011) 035304. A Contreras-Astorga, DJ Fernández, “Asymmetric Penning trap coherent states”, AIP Conference Proceedings 1256 (2010) 239-245. A Contreras-Astorga, DJ Fernandez, “Supersymmetric partners of the trigonometric Pöschl-Teller potentials”, J Phys A 41 (2008) 475303. A Contreras-Astorga, DJ Fernandez, “Second-order SUSY partners of the trigonometric Pöschl-Teller potentials”, J Phys: Conf Ser 128 (2008) 012043. A Contreras-Astorga, DJ Fernandez, “First-Order SUSY Partners of the Trigonometric Pöschl-Teller Potential”, AIP Conference Proceedings 960 (2007) 55-60. JL Flores, A Contreras Astorga, G Garcia-Torales, N Casillas, M Barcena-Soto, “Design and analysis of fiber optical distance sensor”, Proc. -
Proteasy a Jejich Využití V Medicíně Optimalizace Imobilizace Ureasy
UNIVERZITA PALACKÉHO V OLOMOUCI Přírodovědecká fakulta Katedra biochemie Proteasy a jejich využití v medicíně Optimalizace imobilizace ureasy DIPLOMOVÁ PRÁCE Autor: Bc. Jitka Hutařová Studijní program: N1406 Biochemie Studijní obor: Biochemie Forma studia: Prezenční Vedoucí práce: doc. RNDr. Ludmila Zajoncová, Ph.D. Rok: 2016 1 Prohlášení Prohlašuji, že jsem svoji diplomovou práci vypracovala samostatně s využitím informačních zdrojů, které jsou v práci citovány. V Olomouci dne 12. 12. 2016 ……………………………… 2 Poděkování Chtěla bych poděkovat své vedoucí diplomové práce doc. RNDr. Ludmile Zajoncové, Ph.D. za odborné vedení práce, trpělivost a ochotu, kterou mi při zpracování věnovala. Dále bych ráda poděkovala Mgr. Miroslavu Jořenkovi za cenné rady a spolupráci. Poděkováni patří i doc. RNDr. Petru Tarkowskému, Ph.D., který mi umožnil pracovat na plynovém chromatografu. Děkuji také rodině za podporu při studiu. 3 Bibliografická identifikace Jméno a příjmení autora Bc. Jitka Hutařová Název práce Proteasy a jejich využití v medicíně Optimalizace imobilizace ureasy Typ práce Diplomová Pracoviště Katedra biochemie Vedoucí práce doc. RNDr. Ludmila Zajoncová, Ph.D. Rok obhajoby práce 2016 Abstrakt Teoretická část této diplomové práce se zabývá klasifikací proteas, jsou zde popsány jednotlivé rodiny proteas, jejich inhibitory, výskyt a využití, především v medicíně (systémová enzymoterapie). Teoretická část zahrnuje také informace o preparátu Wobenzym, blíže jsou popsány enzymy v něm obsažené (bromelain, papain, trypsin, chymotrypsin). Druhá část je věnována také urease, jejím vlastnostem, výskytu, purifikaci, imobilizaci a praktickým aplikacím. Experimentální část se zabývá optimalizací imobilizace ureasy na magnetické mikročástice Perlosa MG 200 z hlediska volby vhodných podmínek pro imobilizaci. U imobilizované ureasy byla stanovena specifická aktivita, aktivita enzymu během skladování při laboratorní teplotě bez a po ošetření glycinem. -
Diet, Autophagy, and Cancer: a Review
1596 Review Diet, Autophagy, and Cancer: A Review Keith Singletary1 and John Milner2 1Department of Food Science and Human Nutrition, University of Illinois, Urbana, Illinois and 2Nutritional Science Research Group, Division of Cancer Prevention, National Cancer Institute, Bethesda, Maryland Abstract A host of dietary factors can influence various cellular standing of the interactions among bioactive food processes and thereby potentially influence overall constituents, autophagy, and cancer. Whereas a variety cancer risk and tumor behavior. In many cases, these of food components including vitamin D, selenium, factors suppress cancer by stimulating programmed curcumin, resveratrol, and genistein have been shown to cell death. However, death not only can follow the stimulate autophagy vacuolization, it is often difficult to well-characterized type I apoptotic pathway but also can determine if this is a protumorigenic or antitumorigenic proceed by nonapoptotic modes such as type II (macro- response. Additional studies are needed to examine autophagy-related) and type III (necrosis) or combina- dose and duration of exposures and tissue specificity tions thereof. In contrast to apoptosis, the induction of in response to bioactive food components in transgenic macroautophagy may contribute to either the survival or and knockout models to resolve the physiologic impli- death of cells in response to a stressor. This review cations of early changes in the autophagy process. highlights current knowledge and gaps in our under- (Cancer Epidemiol Biomarkers Prev 2008;17(7):1596–610) Introduction A wealth of evidence links diet habits and the accompa- degradation. Paradoxically, depending on the circum- nying nutritional status with cancer risk and tumor stances, this process of ‘‘self-consumption’’ may be behavior (1-3). -
On ATG4B As Drug Target for Treatment of Solid Tumours—The Knowns and the Unknowns
cells Review On ATG4B as Drug Target for Treatment of Solid Tumours—The Knowns and the Unknowns Alexander Agrotis and Robin Ketteler * MRC Laboratory for Molecular Cell Biology, University College London, London WC1E 6BT, UK; [email protected] * Correspondence: [email protected]; Tel.: +44-(0)20-7679-4063 Received: 3 December 2019; Accepted: 19 December 2019; Published: 24 December 2019 Abstract: Autophagy is an evolutionary conserved stress survival pathway that has been shown to play an important role in the initiation, progression, and metastasis of multiple cancers; however, little progress has been made to date in translation of basic research to clinical application. This is partially due to an incomplete understanding of the role of autophagy in the different stages of cancer, and also to an incomplete assessment of potential drug targets in the autophagy pathway. While drug discovery efforts are on-going to target enzymes involved in the initiation phase of the autophagosome, e.g., unc51-like autophagy activating kinase (ULK)1/2, vacuolar protein sorting 34 (Vps34), and autophagy-related (ATG)7, we propose that the cysteine protease ATG4B is a bona fide drug target for the development of anti-cancer treatments. In this review, we highlight some of the recent advances in our understanding of the role of ATG4B in autophagy and its relevance to cancer, and perform a critical evaluation of ATG4B as a druggable cancer target. Keywords: autophagy; ATG4; pancreatic ductal adenocarcinoma (PDAC); drug screening; small molecule compound; screening assay; biomarker 1. Introduction Autophagy is a cellular stress response that has been identified as a target pathway for intervention in various diseases such as neuro-degenerative disorders, pathogen infection, and various types of cancer [1]. -
Huang Y Et Al, PML-Rarα and Autophagy Activation Title Page
Huang Y et al, PML-RARα and autophagy activation Title page PML-RARα enhances autophagic activity through inhibiting Akt/mTOR pathway Running title: PML-RARα and autophagy activation Ying Huang1,2, Xu-Yun Zhao1, Ting-Ting Chen1, Jia-Kai Hou2, Jing Zhang2, Jie Yang1, Scott C. Kogan3 and Guo-Qiang Chen1, 2 Affiliation notes: 1Key Laboratory of Cell Differentiation and Apoptosis of Chinese Ministry of Education, Shanghai Jiao-Tong University School of Medicine (SJTU-SM), Shanghai, China; 2Institute of Health Science, Shanghai Institutes for Biological Sciences (SIBS), Chinese Academy of Sciences & SJTU-SM, Shanghai, China. 3Comprehensive Cancer Center and Department of Laboratory Medicine, University of California, San Francisco, CA. Correspondence: Prof. Guo-Qiang Chen. No.280, Chong-Qing South Rd, Shanghai 200025, CHINA. Tel/Fax: +86-21-64154900; Email: [email protected]. Grant supports: This work is supported in part by grants from National Basic Research Program of China (973 Program) (NO2009CB918404), National Natural Science Foundation of China (NSFC, 30630034, 30870523, 90813034), Chinese Academy of Sciences (KSCX2-YW-R-097), Science and Technology Commission of Shanghai (08JC1413400) as well as leading academic discipline project of Shanghai Municipal Education Commission (J50201). Dr. Guo-Qiang Chen is supported by Shanghai Ling-Jun Talent Program. 1 Huang Y et al, PML-RARα and autophagy activation Abstract Autophagy is a highly conserved, closely-regulated homeostatic cellular activity that allows for the bulk degradation of long-lived proteins and cytoplasmic organelles. Its roles in cancer initiation and progression and in determining the response of tumor cells to anticancer therapy are complicated, and the potential significance of autophagy in the pathogenesis and therapeutic response of acute myeloid leukemia has a little investigation. -
Cambios 2-33
Portada2 10/6/05 8:55 PM Page 1 www.ipn.mx CONGRESO NACIONAL DE INVESTIGACIÓN ESTUDIANTIL Y CONGRESO DE INVESTIGACIÓN POLITÉCNICA 30 de SEPTIEMBRE de 2005 NÚMERO 617 ISSN 0061-3848 Año XL Vol. 8 Impulsa el IPN el Diplomado a Distancia Fortalecimiento de las Organizaciones Inauguración del de la Sociedad Civil año académico 2005-2006 CONTENIDO 617 10/11/05 1:42 PM Page 1 CONTENIDO Gaceta Politécnica 617 30 de septiembre de 2005 2 Inauguraron el Secretario de Educación Pública y 32 Inicia proceso de revisión y actualización del el Titular del IPN el Año Académico 2005-2006 marco normativo del IPN 5 Por primera vez se realizaron el Congreso 33 Instó el Titular del IPN a la comunidad académica Nacional de Investigación Estudiantil a fortalecer programa de protección civil y el Congreso de Investigación Politécnica 34 Ceremonia cívica para conmemorar 10 Diplomado a Distancia Fortalecimiento de las la Independencia Organizaciones de la Sociedad Civil 35 Educación, factor ineludible para fortalecer 11 XIV Congreso Internacional de Computación la cultura cívica y de la legalidad 12 Inició en el IPN sistema único en México 36 Primera Reunión de Egresados del IPN para fortalecer la labor académica: SAAVER de la Región Noreste 14 Efectuaron el IPN y la UNAM 38 Semana de la Ingeniería Sísmica: el Primer Taller Internacional en Matemáticas A 20 años de los sismos de 1985 Aplicadas APPLIEDMATH 39 En la ENMH estudian microbiología 16 Proyectan IPN y Gobierno de Nuevo León instalar de bacterias causantes del cólera un centro de investigación en nanotecnología