The Genera of the Phylum Orthonectida
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Systema Naturae∗
Systema Naturae∗ c Alexey B. Shipunov v. 5.802 (June 29, 2008) 7 Regnum Monera [ Bacillus ] /Bacteria Subregnum Bacteria [ 6:8Bacillus ]1 Superphylum Posibacteria [ 6:2Bacillus ] stat.m. Phylum 1. Firmicutes [ 6Bacillus ]2 Classis 1(1). Thermotogae [ 5Thermotoga ] i.s. 2(2). Mollicutes [ 5Mycoplasma ] 3(3). Clostridia [ 5Clostridium ]3 4(4). Bacilli [ 5Bacillus ] 5(5). Symbiobacteres [ 5Symbiobacterium ] Phylum 2. Actinobacteria [ 6Actynomyces ] Classis 1(6). Actinobacteres [ 5Actinomyces ] Phylum 3. Hadobacteria [ 6Deinococcus ] sed.m. Classis 1(7). Hadobacteres [ 5Deinococcus ]4 Superphylum Negibacteria [ 6:2Rhodospirillum ] stat.m. Phylum 4. Chlorobacteria [ 6Chloroflexus ]5 Classis 1(8). Ktedonobacteres [ 5Ktedonobacter ] sed.m. 2(9). Thermomicrobia [ 5Thermomicrobium ] 3(10). Chloroflexi [ 5Chloroflexus ] ∗Only recent taxa. Viruses are not included. Abbreviations and signs: sed.m. (sedis mutabilis); stat.m. (status mutabilis): s., aut i. (superior, aut interior); i.s. (incertae sedis); sed.p. (sedis possibilis); s.str. (sensu stricto); s.l. (sensu lato); incl. (inclusum); excl. (exclusum); \quotes" for environmental groups; * (asterisk) for paraphyletic taxa; / (slash) at margins for major clades (\domains"). 1Incl. \Nanobacteria" i.s. et dubitativa, \OP11 group" i.s. 2Incl. \TM7" i.s., \OP9", \OP10". 3Incl. Dictyoglomi sed.m., Fusobacteria, Thermolithobacteria. 4= Deinococcus{Thermus. 5Incl. Thermobaculum i.s. 1 4(11). Dehalococcoidetes [ 5Dehalococcoides ] 5(12). Anaerolineae [ 5Anaerolinea ]6 Phylum 5. Cyanobacteria [ 6Nostoc ] Classis 1(13). Gloeobacteres [ 5Gloeobacter ] 2(14). Chroobacteres [ 5Chroococcus ]7 3(15). Hormogoneae [ 5Nostoc ] Phylum 6. Bacteroidobacteria [ 6Bacteroides ]8 Classis 1(16). Fibrobacteres [ 5Fibrobacter ] 2(17). Chlorobi [ 5Chlorobium ] 3(18). Salinibacteres [ 5Salinibacter ] 4(19). Bacteroidetes [ 5Bacteroides ]9 Phylum 7. Spirobacteria [ 6Spirochaeta ] Classis 1(20). Spirochaetes [ 5Spirochaeta ] s.l.10 Phylum 8. Planctobacteria [ 6Planctomyces ]11 Classis 1(21). -
Platyhelminthes, Nemertea, and "Aschelminthes" - A
BIOLOGICAL SCIENCE FUNDAMENTALS AND SYSTEMATICS – Vol. III - Platyhelminthes, Nemertea, and "Aschelminthes" - A. Schmidt-Rhaesa PLATYHELMINTHES, NEMERTEA, AND “ASCHELMINTHES” A. Schmidt-Rhaesa University of Bielefeld, Germany Keywords: Platyhelminthes, Nemertea, Gnathifera, Gnathostomulida, Micrognathozoa, Rotifera, Acanthocephala, Cycliophora, Nemathelminthes, Gastrotricha, Nematoda, Nematomorpha, Priapulida, Kinorhyncha, Loricifera Contents 1. Introduction 2. General Morphology 3. Platyhelminthes, the Flatworms 4. Nemertea (Nemertini), the Ribbon Worms 5. “Aschelminthes” 5.1. Gnathifera 5.1.1. Gnathostomulida 5.1.2. Micrognathozoa (Limnognathia maerski) 5.1.3. Rotifera 5.1.4. Acanthocephala 5.1.5. Cycliophora (Symbion pandora) 5.2. Nemathelminthes 5.2.1. Gastrotricha 5.2.2. Nematoda, the Roundworms 5.2.3. Nematomorpha, the Horsehair Worms 5.2.4. Priapulida 5.2.5. Kinorhyncha 5.2.6. Loricifera Acknowledgements Glossary Bibliography Biographical Sketch Summary UNESCO – EOLSS This chapter provides information on several basal bilaterian groups: flatworms, nemerteans, Gnathifera,SAMPLE and Nemathelminthes. CHAPTERS These include species-rich taxa such as Nematoda and Platyhelminthes, and as taxa with few or even only one species, such as Micrognathozoa (Limnognathia maerski) and Cycliophora (Symbion pandora). All Acanthocephala and subgroups of Platyhelminthes and Nematoda, are parasites that often exhibit complex life cycles. Most of the taxa described are marine, but some have also invaded freshwater or the terrestrial environment. “Aschelminthes” are not a natural group, instead, two taxa have been recognized that were earlier summarized under this name. Gnathifera include taxa with a conspicuous jaw apparatus such as Gnathostomulida, Micrognathozoa, and Rotifera. Although they do not possess a jaw apparatus, Acanthocephala also belong to Gnathifera due to their epidermal structure. ©Encyclopedia of Life Support Systems (EOLSS) BIOLOGICAL SCIENCE FUNDAMENTALS AND SYSTEMATICS – Vol. -
New Zealand's Genetic Diversity
1.13 NEW ZEALAND’S GENETIC DIVERSITY NEW ZEALAND’S GENETIC DIVERSITY Dennis P. Gordon National Institute of Water and Atmospheric Research, Private Bag 14901, Kilbirnie, Wellington 6022, New Zealand ABSTRACT: The known genetic diversity represented by the New Zealand biota is reviewed and summarised, largely based on a recently published New Zealand inventory of biodiversity. All kingdoms and eukaryote phyla are covered, updated to refl ect the latest phylogenetic view of Eukaryota. The total known biota comprises a nominal 57 406 species (c. 48 640 described). Subtraction of the 4889 naturalised-alien species gives a biota of 52 517 native species. A minimum (the status of a number of the unnamed species is uncertain) of 27 380 (52%) of these species are endemic (cf. 26% for Fungi, 38% for all marine species, 46% for marine Animalia, 68% for all Animalia, 78% for vascular plants and 91% for terrestrial Animalia). In passing, examples are given both of the roles of the major taxa in providing ecosystem services and of the use of genetic resources in the New Zealand economy. Key words: Animalia, Chromista, freshwater, Fungi, genetic diversity, marine, New Zealand, Prokaryota, Protozoa, terrestrial. INTRODUCTION Article 10b of the CBD calls for signatories to ‘Adopt The original brief for this chapter was to review New Zealand’s measures relating to the use of biological resources [i.e. genetic genetic resources. The OECD defi nition of genetic resources resources] to avoid or minimize adverse impacts on biological is ‘genetic material of plants, animals or micro-organisms of diversity [e.g. genetic diversity]’ (my parentheses). -
Spermiogenesis in the Acoel Symsagittifera Roscoffensis: Nucleus-Plasma
bioRxiv preprint doi: https://doi.org/10.1101/828251; this version posted November 1, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Spermiogenesis in the acoel Symsagittifera roscoffensis: nucleus-plasma membrane contact sites and microtubules. Matthew J. Hayes1, Anne-C. Zakrzewski2, Tim P. Levine1 and Maximilian J. Telford2 1University College London Institute of Ophthalmology, 11-43 Bath Street, London EC1V 9EL, UK 2 Centre for Life’s Origins and Evolution, Department of Genetics, Evolution and Environment, University College London, Gower Street, London, WC1E 6BT, UK Running title: Contact sites and microtubule rearrangements in spermiogenesis Summary sentence: During spermiogenesis in the acoel flatworm Symsagittifera roscoffensis, two previously unidentified contact sites contribute to the structure of the mature spermatozoon and the axonemal structures show direct continuity between doublet and dense core microtubules. Keywords: Contact-site, acrosome, gamete biology, spermatid, spermatogenesis, spermiogenesis, acoel. bioRxiv preprint doi: https://doi.org/10.1101/828251; this version posted November 1, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Abstract Symsagittifera roscoffensis is a small marine worm found in the intertidal zone of sandy beaches around the European shores of the Atlantic. S. roscoffensis is a member of the Acoelomorpha, a group of flatworms formerly classified with the Platyhelminthes, but now recognised as Xenacoelomorpha, a separate phylum of disputed affinity. -
Number of Living Species in Australia and the World
Numbers of Living Species in Australia and the World 2nd edition Arthur D. Chapman Australian Biodiversity Information Services australia’s nature Toowoomba, Australia there is more still to be discovered… Report for the Australian Biological Resources Study Canberra, Australia September 2009 CONTENTS Foreword 1 Insecta (insects) 23 Plants 43 Viruses 59 Arachnida Magnoliophyta (flowering plants) 43 Protoctista (mainly Introduction 2 (spiders, scorpions, etc) 26 Gymnosperms (Coniferophyta, Protozoa—others included Executive Summary 6 Pycnogonida (sea spiders) 28 Cycadophyta, Gnetophyta under fungi, algae, Myriapoda and Ginkgophyta) 45 Chromista, etc) 60 Detailed discussion by Group 12 (millipedes, centipedes) 29 Ferns and Allies 46 Chordates 13 Acknowledgements 63 Crustacea (crabs, lobsters, etc) 31 Bryophyta Mammalia (mammals) 13 Onychophora (velvet worms) 32 (mosses, liverworts, hornworts) 47 References 66 Aves (birds) 14 Hexapoda (proturans, springtails) 33 Plant Algae (including green Reptilia (reptiles) 15 Mollusca (molluscs, shellfish) 34 algae, red algae, glaucophytes) 49 Amphibia (frogs, etc) 16 Annelida (segmented worms) 35 Fungi 51 Pisces (fishes including Nematoda Fungi (excluding taxa Chondrichthyes and (nematodes, roundworms) 36 treated under Chromista Osteichthyes) 17 and Protoctista) 51 Acanthocephala Agnatha (hagfish, (thorny-headed worms) 37 Lichen-forming fungi 53 lampreys, slime eels) 18 Platyhelminthes (flat worms) 38 Others 54 Cephalochordata (lancelets) 19 Cnidaria (jellyfish, Prokaryota (Bacteria Tunicata or Urochordata sea anenomes, corals) 39 [Monera] of previous report) 54 (sea squirts, doliolids, salps) 20 Porifera (sponges) 40 Cyanophyta (Cyanobacteria) 55 Invertebrates 21 Other Invertebrates 41 Chromista (including some Hemichordata (hemichordates) 21 species previously included Echinodermata (starfish, under either algae or fungi) 56 sea cucumbers, etc) 22 FOREWORD In Australia and around the world, biodiversity is under huge Harnessing core science and knowledge bases, like and growing pressure. -
Download the Abstract Book
1 Exploring the male-induced female reproduction of Schistosoma mansoni in a novel medium Jipeng Wang1, Rui Chen1, James Collins1 1) UT Southwestern Medical Center. Schistosomiasis is a neglected tropical disease caused by schistosome parasites that infect over 200 million people. The prodigious egg output of these parasites is the sole driver of pathology due to infection. Female schistosomes rely on continuous pairing with male worms to fuel the maturation of their reproductive organs, yet our understanding of their sexual reproduction is limited because egg production is not sustained for more than a few days in vitro. Here, we explore the process of male-stimulated female maturation in our newly developed ABC169 medium and demonstrate that physical contact with a male worm, and not insemination, is sufficient to induce female development and the production of viable parthenogenetic haploid embryos. By performing an RNAi screen for genes whose expression was enriched in the female reproductive organs, we identify a single nuclear hormone receptor that is required for differentiation and maturation of germ line stem cells in female gonad. Furthermore, we screen genes in non-reproductive tissues that maybe involved in mediating cell signaling during the male-female interplay and identify a transcription factor gli1 whose knockdown prevents male worms from inducing the female sexual maturation while having no effect on male:female pairing. Using RNA-seq, we characterize the gene expression changes of male worms after gli1 knockdown as well as the female transcriptomic changes after pairing with gli1-knockdown males. We are currently exploring the downstream genes of this transcription factor that may mediate the male stimulus associated with pairing. -
Laboratory Reference Module Summary Report LR22
Laboratory Reference Module Summary Report Benthic Invertebrate Component - 2017/18 LR22 26 March 2018 Author: Tim Worsfold Reviewer: David Hall, NMBAQCS Project Manager Approved by: Myles O'Reilly, Contract Manager, SEPA Contact: [email protected] MODULE / EXERCISE DETAILS Module: Laboratory Reference (LR) Exercises: LR22 Data/Sample Request Circulated: 10th July 2017 Sample Submission Deadline: 31st August 2017 Number of Subscribing Laboratories: 7 Number of LR Received: 4 Contents Table 1. Summary of mis-identified taxa in the Laboratory Reference module (LR22) (erroneous identifications in brackets). Table 2. Summary of identification policy differences in the Laboratory Reference Module (LR22) (original identifications in brackets). Appendix. LR22 individual summary reports for participating laboratories. Table 1. Summary of mis-identified taxa in the Laboratory Reference Module (LR22) (erroneous identifications in brackets). Taxonomic Major Taxonomic Group LabCode Edits Polychaeta Oligochaeta Crustacea Mollusca Other Spio symphyta (Spio filicornis ) - Leucothoe procera (Leucothoe ?richardii ) - - Scolelepis bonnieri (Scolelepis squamata ) - - - - BI_2402 5 Laonice (Laonice sarsi ) - - - - Dipolydora (Dipolydora flava ) - - - - Goniada emerita (Goniadella bobrezkii ) - Nebalia reboredae (Nebalia bipes ) - - Polydora sp. A (Polydora cornuta ) - Diastylis rathkei (Diastylis cornuta ) - - BI_2403 7 Syllides? (Anoplosyllis edentula ) - Abludomelita obtusata (Tryphosa nana ) - in mixture - - Spirorbinae (Ditrupa arietina ) - - - - -
Phylum MOLLUSCA
285 MOLLUSCA: SOLENOGASTRES-POLYPLACOPHORA Phylum MOLLUSCA Class SOLENOGASTRES Family Lepidomeniidae NEMATOMENIA BANYULENSIS (Pruvot, 1891, p. 715, as Dondersia) Occasionally on Lafoea dumosa (R.A.T., S.P., E.J.A.): at 4 positions S.W. of Eddystone, 42-49 fm., on Lafoea dumosa (Crawshay, 1912, p. 368): Eddystone, 29 fm., 1920 (R.W.): 7, 3, 1 and 1 in 4 hauls N.E. of Eddystone, 1948 (V.F.) Breeding: gonads ripe in Aug. (R.A.T.) Family Neomeniidae NEOMENIA CARINATA Tullberg, 1875, p. 1 One specimen Rame-Eddystone Grounds, 29.12.49 (V.F.) Family Proneomeniidae PRONEOMENIA AGLAOPHENIAE Kovalevsky and Marion [Pruvot, 1891, p. 720] Common on Thecocarpus myriophyllum, generally coiled around the base of the stem of the hydroid (S.P., E.J.A.): at 4 positions S.W. of Eddystone, 43-49 fm. (Crawshay, 1912, p. 367): S. of Rame Head, 27 fm., 1920 (R.W.): N. of Eddystone, 29.3.33 (A.J.S.) Class POLYPLACOPHORA (=LORICATA) Family Lepidopleuridae LEPIDOPLEURUS ASELLUS (Gmelin) [Forbes and Hanley, 1849, II, p. 407, as Chiton; Matthews, 1953, p. 246] Abundant, 15-30 fm., especially on muddy gravel (S.P.): at 9 positions S.W. of Eddystone, 40-43 fm. (Crawshay, 1912, p. 368, as Craspedochilus onyx) SALCOMBE. Common in dredge material (Allen and Todd, 1900, p. 210) LEPIDOPLEURUS, CANCELLATUS (Sowerby) [Forbes and Hanley, 1849, II, p. 410, as Chiton; Matthews. 1953, p. 246] Wembury West Reef, three specimens at E.L.W.S.T. by J. Brady, 28.3.56 (G.M.S.) Family Lepidochitonidae TONICELLA RUBRA (L.) [Forbes and Hanley, 1849, II, p. -
First Record and New Combination of a Rissoid Gastropod from Off South Brazil
Biotemas, 22 (4): 251-254, dezembro de 2009 Short Communication251 ISSN 0103 – 1643 First record and new combination of a rissoid gastropod from off south Brazil Fabio Wiggers1* Inga Veitenheimer-Mendes PPG em Biologia Animal, Departamento de Zoologia Instituto de Biociências, Universidade Federal do Rio Grande do Sul *Corresponding author [email protected] Rua Lauro Linhares, 1600, apto 402 CEP 88036-002, Florianópolis – SC, Brazil Submetido em 03/03/2009 Aceito para publicação em 28/08/2009 Resumo Primeiro registro e nova combinação de um gastrópode Rissoídeo no sul do Brasil. Após mais de trinta e cinco anos de sua descrição original, Rissoa cruzi Castellanos & Fernández, 1974 é registrada pela primeira vez em águas Brasileiras. A análise das características da rádula e da concha indica que a espécie não está corretamente alocada no gênero Rissoa. Baseado na análise conquiliológica é proposta a realocação de R. cruzi no gênero Alvania Risso, 1826 e é feita uma comparação com outros rissoídeos. Unitermos: Atlântico Sul, Brasil, nova combinação, novo registro, Rissoidae Abstract After 35 years of its original description, Rissoa cruzi Castellanos & Fernández, 1974 is first recorded in southern Brazilian waters. An analysis of both shell and radular characteristics indicated that R. cruzi does not conform to its current generic assignment. Based on shell characters, R. cruzi is placed in the genus Alvania Risso, 1826. A comparison with other rissoids from the same region is also provided. Key words: Brazil, new combination, new record, Rissoidae, South Western Atlantic Introduction Ponder and Worsfold (1994) state that the species described by Castellanos and Fernandez (1974), although Rissoa cruzi Castellanos & Fernández, 1974 was not available to them for study, could be recognized first described based on material collected in the intestinal (based on its description and illustrations) as a taxon Astropecten brasiliensis tract of the asteoridean Müller & different than those dealt with in their report. -
Metabarcoding in the Abyss: Uncovering Deep-Sea Biodiversity Through Environmental
Metabarcoding in the abyss : uncovering deep-sea biodiversity through environmental DNA Miriam Isabelle Brandt To cite this version: Miriam Isabelle Brandt. Metabarcoding in the abyss : uncovering deep-sea biodiversity through environmental DNA. Agricultural sciences. Université Montpellier, 2020. English. NNT : 2020MONTG033. tel-03197842 HAL Id: tel-03197842 https://tel.archives-ouvertes.fr/tel-03197842 Submitted on 14 Apr 2021 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. THÈSE POUR OBTENIR LE GRADE DE DOCTEUR DE L’UNIVERSITÉ DE M ONTPELLIER En Sciences de l'Évolution et de la Biodiversité École doctorale GAIA Unité mixte de recherche MARBEC Pourquoi Pas les Abysses ? L’ADN environnemental pour l’étude de la biodiversité des grands fonds marins Metabarcoding in the abyss: uncovering deep - sea biodiversity through environmental DNA Présentée par Miriam Isabelle BRANDT Le 10 juillet 2020 Sous la direction de Sophie ARNAUD-HAOND et Daniela ZEPPILLI Devant le jury composé de Sofie DERYCKE, Senior researcher/Professeur rang A, ILVO, Belgique Rapporteur -
Early Ontogeny and Palaeoecology of the Mid−Miocene Rissoid Gastropods of the Central Paratethys
Early ontogeny and palaeoecology of the Mid−Miocene rissoid gastropods of the Central Paratethys THORSTEN KOWALKE and MATHIAS HARZHAUSER Kowalke, T. and Harzhauser, M. 2004. Early ontogeny and palaeoecology of the Mid−Miocene rissoid gastropods of the Central Paratethys. Acta Palaeontologica Polonica 49 (1): 111–134. Twenty−six species of Rissoidae (Caenogastropoda: Littorinimorpha: Rissooidea) are described from the Badenian and Early Sarmatian of 14 localities in Austria and the Czech Republic (Molasse Basin, Styrian Basin, Vienna Basin) and from the Badenian of Coştei (Romania). For the first time, the early ontogenetic skeletal characters of these gastropods are de− scribed. Based on these features an indirect larval development with a planktotrophic veliger could be reconstructed for all investigated Mid−Miocene species. The status of Mohrensterniinae as a subfamily of the Rissoidae is confirmed by the mor− phology of the low conical protoconch, consisting of a fine spirally sculptured embryonic shell and a larval shell which is smooth except for growth lines. Transitions from embryonic shells to larval shells and from larval shells to teleoconchs are slightly thickened and indistinct. Whilst representatives of the subfamily Rissoinae characterise the marine Badenian assem− blages, Mohrensterniinae predominate the Early Sarmatian faunas. We hypothesize that this take−over by the Mohren− sterniinae was triggered by changes in the water chemistry towards polyhaline conditions. Consequently, the shift towards hypersaline conditions in the Late Sarmatian is mirrored by the abrupt decline of the subfamily. Four new species Rissoa costeiensis (Rissoinae) from the Badenian and Mohrensternia hollabrunnensis, Mohrensternia pfaffstaettensis,and Mohrensternia waldhofensis (Mohrensterniinae) from the Early Sarmatian are introduced. -
Joseph Heller a Natural History Illustrator: Tuvia Kurz
Joseph Heller Sea Snails A natural history Illustrator: Tuvia Kurz Sea Snails Joseph Heller Sea Snails A natural history Illustrator: Tuvia Kurz Joseph Heller Evolution, Systematics and Ecology The Hebrew University of Jerusalem Jerusalem , Israel ISBN 978-3-319-15451-0 ISBN 978-3-319-15452-7 (eBook) DOI 10.1007/978-3-319-15452-7 Library of Congress Control Number: 2015941284 Springer Cham Heidelberg New York Dordrecht London © Springer International Publishing Switzerland 2015 This work is subject to copyright. All rights are reserved by the Publisher, whether the whole or part of the material is concerned, specifi cally the rights of translation, reprinting, reuse of illustrations, recitation, broadcasting, reproduction on microfi lms or in any other physical way, and transmission or information storage and retrieval, electronic adaptation, computer software, or by similar or dissimilar methodology now known or hereafter developed. The use of general descriptive names, registered names, trademarks, service marks, etc. in this publication does not imply, even in the absence of a specifi c statement, that such names are exempt from the relevant protective laws and regulations and therefore free for general use. The publisher, the authors and the editors are safe to assume that the advice and information in this book are believed to be true and accurate at the date of publication. Neither the publisher nor the authors or the editors give a warranty, express or implied, with respect to the material contained herein or for any errors or omissions that may have been made. Printed on acid-free paper Springer International Publishing AG Switzerland is part of Springer Science+Business Media (www.springer.com) Contents Part I A Background 1 What Is a Mollusc? ................................................................................