Squalene: a Multi-Task Link in the Crossroads of Cancer and Aging
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33 34 35 Lipid Synthesis Laptop
BI/CH 422/622 Liver cytosol ANABOLISM OUTLINE: Photosynthesis Carbohydrate Biosynthesis in Animals Biosynthesis of Fatty Acids and Lipids Fatty Acids Triacylglycerides contrasts Membrane lipids location & transport Glycerophospholipids Synthesis Sphingolipids acetyl-CoA carboxylase Isoprene lipids: fatty acid synthase Ketone Bodies ACP priming 4 steps Cholesterol Control of fatty acid metabolism isoprene synth. ACC Joining Reciprocal control of b-ox Cholesterol Synth. Diversification of fatty acids Fates Eicosanoids Cholesterol esters Bile acids Prostaglandins,Thromboxanes, Steroid Hormones and Leukotrienes Metabolism & transport Control ANABOLISM II: Biosynthesis of Fatty Acids & Lipids Lipid Fat Biosynthesis Catabolism Fatty Acid Fatty Acid Synthesis Degradation Ketone body Utilization Isoprene Biosynthesis 1 Cholesterol and Steroid Biosynthesis mevalonate kinase Mevalonate to Activated Isoprenes • Two phosphates are transferred stepwise from ATP to mevalonate. • A third phosphate from ATP is added at the hydroxyl, followed by decarboxylation and elimination catalyzed by pyrophospho- mevalonate decarboxylase creates a pyrophosphorylated 5-C product: D3-isopentyl pyrophosphate (IPP) (isoprene). • Isomerization to a second isoprene dimethylallylpyrophosphate (DMAPP) gives two activated isoprene IPP compounds that act as precursors for D3-isopentyl pyrophosphate Isopentyl-D-pyrophosphate all of the other lipids in this class isomerase DMAPP Cholesterol and Steroid Biosynthesis mevalonate kinase Mevalonate to Activated Isoprenes • Two phosphates -
Biosynthesis of New Alpha-Bisabolol Derivatives Through a Synthetic Biology Approach Arthur Sarrade-Loucheur
Biosynthesis of new alpha-bisabolol derivatives through a synthetic biology approach Arthur Sarrade-Loucheur To cite this version: Arthur Sarrade-Loucheur. Biosynthesis of new alpha-bisabolol derivatives through a synthetic biology approach. Biochemistry, Molecular Biology. INSA de Toulouse, 2020. English. NNT : 2020ISAT0003. tel-02976811 HAL Id: tel-02976811 https://tel.archives-ouvertes.fr/tel-02976811 Submitted on 23 Oct 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. THÈSE En vue de l’obtention du DOCTORAT DE L’UNIVERSITÉ DE TOULOUSE Délivré par l'Institut National des Sciences Appliquées de Toulouse Présentée et soutenue par Arthur SARRADE-LOUCHEUR Le 30 juin 2020 Biosynthèse de nouveaux dérivés de l'α-bisabolol par une approche de biologie synthèse Ecole doctorale : SEVAB - Sciences Ecologiques, Vétérinaires, Agronomiques et Bioingenieries Spécialité : Ingénieries microbienne et enzymatique Unité de recherche : TBI - Toulouse Biotechnology Institute, Bio & Chemical Engineering Thèse dirigée par Gilles TRUAN et Magali REMAUD-SIMEON Jury -
WO 2009/005519 Al
(12) INTERNATIONAL APPLICATION PUBLISHED UNDER THE PATENT COOPERATION TREATY (PCT) (19) World Intellectual Property Organization International Bureau (43) International Publication Date PCT (10) International Publication Number 8 January 2009 (08.01.2009) WO 2009/005519 Al (51) International Patent Classification: (81) Designated States (unless otherwise indicated, for every A61K 31/19 (2006.01) A61K 31/185 (2006.01) kind of national protection available): AE, AG, AL, AM, A61K 31/20 (2006.01) A61K 31/225 (2006.01) AT,AU, AZ, BA, BB, BG, BH, BR, BW, BY,BZ, CA, CH, CN, CO, CR, CU, CZ, DE, DK, DM, DO, DZ, EC, EE, EG, (21) International Application Number: ES, FI, GB, GD, GE, GH, GM, GT, HN, HR, HU, ID, IL, PCT/US2007/072499 IN, IS, JP, KE, KG, KM, KN, KP, KR, KZ, LA, LC, LK, LR, LS, LT, LU, LY,MA, MD, ME, MG, MK, MN, MW, (22) International Filing Date: 29 June 2007 (29.06.2007) MX, MY, MZ, NA, NG, NI, NO, NZ, OM, PG, PH, PL, PT, RO, RS, RU, SC, SD, SE, SG, SK, SL, SM, SV, SY, (25) Filing Language: English TJ, TM, TN, TR, TT, TZ, UA, UG, US, UZ, VC, VN, ZA, ZM, ZW (26) Publication Language: English (71) Applicant (for all designated States except US): AC- (84) Designated States (unless otherwise indicated, for every CERA, INC. [US/US]; 380 Interlocken Crescent, Suite kind of regional protection available): ARIPO (BW, GH, 780, Broomfield, CO 80021 (US). GM, KE, LS, MW, MZ, NA, SD, SL, SZ, TZ, UG, ZM, ZW), Eurasian (AM, AZ, BY, KG, KZ, MD, RU, TJ, TM), (72) Inventor; and European (AT,BE, BG, CH, CY, CZ, DE, DK, EE, ES, FI, (75) Inventor/Applicant (for US only): HENDERSON, FR, GB, GR, HU, IE, IS, IT, LT,LU, LV,MC, MT, NL, PL, Samuel, T. -
Squalene, Olive Oil, and Cancer Risk: a Review and Hypothesis
Vol. 6, 1101-1103, December 1997 Cancer Epidemiology,Blornarkers & Prevention 1101 Review Squalene, Olive Oil, and Cancer Risk: A Review and Hypothesis Harold L. Newmark’ of unsaturated fatty acids. In Italy, about 80% of edible oil is Strang Cancer Research Laboratory, The Rockefeller University, New York, olive oil,2 suggesting a protective effect of olive oil intake. In New York 10021, and Laboratory for Cancer Research, College of Pharmacy, another Italian case-control study of diet and pancreatic cancer Rutgers University, Piscataway, New Jersey 08855-0789 (8), increased frequency of edible oil consumption was associ- ated with a trend toward decreased risk. Edible oil in Italy consists of about 80% olive oil, thus suggesting a protective Abstract effect of olive oil in pancreatic cancer.2 Epidemioiogical studies of breast and pancreatic cancer Animal studies on fat and cancer have generally shown in several Mediterranean populations have demonstrated that olive oil either has no effect or a protective effect on the that increased dietary intake of olive oil is associated with prevention of a variety of chemically induced tumors. Olive oil a small decreased risk or no increased risk of cancer, did not increase tumor incidence or growth, in contrast to corn despite a higjier proportion of overall lipid intake. and sunflower oil, in some mammary cancer models (9 -1 1) and Experimental animal model studies of high dietary fat also in colon cancer models (12, 13), although in an earlier and cancer also indicate that olive oil has either no effect report, olive oil exhibited mammary tumor-promoting proper- or a protective effect on the prevention of a variety of ties similar to that ofcorn oil (14), in contrast to the later studies chemically induced tumors. -
Gas Chromatographic-Mass Spectrometric Investigation of Seep
RICE UNIVERSITY GAS CHROHATOGRAP! 11 C-i IASS SPECTROMCTRIC iriVESTIGATION OF SEEP OIL ISOPRENOID ALKANES by' David James Curry A THESIS SUBMITTED III PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF MASTER OF ARTS Thesis Director's' signature ■ficCt rfc Houston, Texas August, 1072 TABLE OF COKTENTS ACSC'IOMLEDGEMEHTS ' 1 ABSTRACT... 2 INTRODUCTION TO GEOCHEMISTRY 4. ISOPRENOID ALKANES. 10 SAMPLE DESCRIPTION ....1C EXPERIMENTAL METHODS.-. ;...20 INTERPRETATION AND DISCUSSION OF RESULTS.......20 SUMMARY. .01 POSSIBILITIES FOR FUTURE STUDY ........64 TABLES.'..... ........SO CHROMATOGRAMS 71 FOOTNOTES..... 74 SELECTED BIBLIOGRAPHY. 76 MASS SPECTRA MS 1 (Phytane) 15,43 I IS 2 (Authenti c Pri s tane)..... .. .25 MS 3 (Pristane).' 26,40 I IS 4 (Au then ti c P r.i s tane) . ...27 MS 5 (C^ Isoprenoid) ...31 OO MS 6 (3-,7-,ll-trin;ethyl tetradecana) • • « sJsJ MS 7 (C1? Unknown) ... 33 MS 8 (C10 Isoorenoid) ...36 MS 9 (Pristane) ,38 MS 18 (Ci Unknown) 41 MS 11 (C22 Isoprenoicl) 44 MS 12 (C23 Isoprenoid),. 46 IIS 13- (C2* Isoprenoicl) 48 MS 14 (C2g Isoprenoicl) 50 MS 15 (C2Q Iscprenoid)...: 51 MS 15 (COQ Isoprenoid) MS 17 (Proposed C2C Isoprenoid) 64 CHROMATOGRAMS GC I (Total Branched alkane-cycloalkane Fraction) 71 GC II (Still Residue Branched Alkane-cycloalkane Fraction)72 GC III (Total, normal Alkane Fraction) 73 (GC I,II,III were taken on 3% SE-30 phase) TABLES I: Composition of Distillation and 56 Column'Chromatography Fractions II: Approximate Relative and Absoluts 67 Amounts of Isoprenoid Components III: Off Scale Intensities of Mass..... !...68 Spectrometric Peaks IV: Initial Separatory Gas Chroma- _ 69 tographic Conditions V: . -
A Key Mammalian Cholesterol Synthesis Enzyme, Squalene Monooxygenase, Is Allosterically Stabilized by Its Substrate
A key mammalian cholesterol synthesis enzyme, squalene monooxygenase, is allosterically stabilized by its substrate Hiromasa Yoshiokaa, Hudson W. Coatesb, Ngee Kiat Chuab, Yuichi Hashimotoa, Andrew J. Brownb,1, and Kenji Ohganea,c,1 aInstitute for Quantitative Biosciences, The University of Tokyo, 113-0032 Tokyo, Japan; bSchool of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, NSW 2052, Australia; and cSynthetic Organic Chemistry Laboratory, RIKEN, 351-0198 Saitama, Japan Edited by Brenda A. Schulman, Max Planck Institute of Biochemistry, Martinsried, Germany, and approved February 18, 2020 (received for review September 20, 2019) Cholesterol biosynthesis is a high-cost process and, therefore, is the cognate E3 ligase for SM (9, 10), catalyzing its ubiquitination tightly regulated by both transcriptional and posttranslational in the N100 region (11). negative feedback mechanisms in response to the level of cellular Despite its importance in cholesterol-accelerated degradation, cholesterol. Squalene monooxygenase (SM, also known as squalene the structure and function of the SM-N100 region has not been epoxidase or SQLE) is a rate-limiting enzyme in the cholesterol fully resolved. Thus far, biochemical analyses have revealed the biosynthetic pathway and catalyzes epoxidation of squalene. The presence of a reentrant loop anchoring SM to the ER membrane stability of SM is negatively regulated by cholesterol via its and an amphipathic helix required for cholesterol-accelerated N-terminal regulatory domain (SM-N100). In this study, using a degradation (7, 8), while X-ray crystallography has revealed the SM-luciferase fusion reporter cell line, we performed a chemical architecture of the catalytic domain of SM (12). However, the genetics screen that identified inhibitors of SM itself as up-regulators highly hydrophobic and disordered nature of the N100 region of SM. -
Inhibition of Sterol Biosynthesis by Bacitracin (Mevalonic Acid/CQ-Isopentenyl Pyrophosphate/C15-Farnesyl Pyrophosphate) K
Proc. Nat. Acad. Sci. USA Vol. 69, No. 5, pp. 1287-1289, May 1972 Inhibition of Sterol Biosynthesis by Bacitracin (mevalonic acid/CQ-isopentenyl pyrophosphate/C15-farnesyl pyrophosphate) K. JOHN STONE* AND JACK L. STROMINGERt Biological Laboratories, Harvard University, Cambridge, Massachusetts 02138 Contributed by Jack L. Strominger, March 14 1972 ABSTRACT Bacitracin is an inhibitor of the biosyn- muslin eliminated floating particles of fat from the enzyme thesis of squalene and sterols from mevalonic acid, C5- solution enzyme). In some the isopentenyl pyrophosphate, or C15-farnesyl pyrophosphate (Sio experiments, S10 enzyme catalyzed by preparations from rat liver. The antibiotic was centrifuged at 105,000 X g for 90 min to remove micro- is active at extremely low ratios of antibiotic to substrate. somal particles, and this supernatant is referred to as the Sc1t The mechanism of inhibition appears to be the formation enzyme. of a complex between bacitracin, divalent cation, and C15- Bacitracin was generously provided by the Upjohn Co., farnesyl pyrophosphate and other isoprenyl pyrophos- phates. It is similar to the formation of the complex with Kalamazoo, Mich. [2-14C]3RS-mevalonic acid was obtained C55-isopropenyl pyrophosphate in microbial systems. The from New England Nuclear Co., [SH]farnesyl pyrophosphate toxicity of bacitracin for animal cells could be due in part and [2-'4C]isopentenyl pyrophosphate were generous gifts to the formation of these complexes. from Dr. Konrad Bloch. The Enzyme incubations (about 0.5-ml samples) were termi- antibacterial properties of bacitracin result, in part, from nated by in a water bath for 1 an inhibition of the heating boiling min. -
Supporting Information for Low-Priority Substance Tetracosane, 2,6,10,15,19,23-Hexamethyl-(CASRN 111-01-3) (Squalane) Final Desi
Supporting Information for Low-Priority Substance Tetracosane, 2,6,10,15,19,23-Hexamethyl- (CASRN 111-01-3) (Squalane) Final Designation February 20, 2020 Office of Pollution Prevention and Toxics U.S. Environmental Protection Agency 1200 Pennsylvania Avenue Washington, DC 20460 Contents 1. Introduction ................................................................................................................................................................ 1 2. Background on Squalane .......................................................................................................................................... 3 3. Physical-Chemical Properties ................................................................................................................................... 4 3.1 References ...................................................................................................................................................... 6 4. Relevant Assessment History ................................................................................................................................... 7 5. Conditions of Use ....................................................................................................................................................... 8 6. Hazard Characterization .......................................................................................................................................... 10 6.1 Human Health Hazard ................................................................................................................................... -
Livers of Sharks, Especially Deepwater Shark Species Which Are Especially Vulnerable Theto Overfishing and Often Endangered
AN EXCLUSIVE STUDY BY BLOOM March 2015 Shark in our beauty BEAST creams and the Beauty Shark in our beauty BEAST creams Some cosmetic brands still use a substance derived from the liver of sharks in the blends of moisturizing creams. In 2012,and BLOOM carried out a worldwide study on the use of shark squalane, a substance extracted from the livers of sharks, especially deepwater shark species which are especially vulnerable theto overfishing and often endangered. The study revealed that the cosmetics sector was the main consumer of animal squalane, even though plant substitutes derived from sugar cane or olive were available. The report pointed to the urgency for corporations to take their environmental responsibility seriously and to modify their supply chain in order to exclusively use plant squalane. Two years later, in 2014, BLOOM proceeded to carry out the largest test ever made on commercial creams to identify the presence of shark squalane in them. In total, BLOOM tested 72 moisturizing creams whose list of ingredients mentioned “squalane”. Labels did not specify whether the squalane was animal-based (shark) or plant-based (olive or sugarcane). Ten creams out of 72 did not contain a sufficient volume of squalane altogether to identify its origin, but results were robust for 62 of the products tested. As a conclusion, one moisturizing cream out of five contains shark squalane. It appearsBeauty that a high proportion of Asian brands still use shark squalane while Western brands, although still massively concerned by this issue in 2012, have globally shifted away from using shark substances. -
Squalene Emulsions for Parenteral Vaccine and Drug Delivery
Molecules 2009, 14, 3286-3312; doi:10.3390/molecules14093286 OPEN ACCESS molecules ISSN 1420-3049 www.mdpi.com/journal/molecules Review Squalene Emulsions for Parenteral Vaccine and Drug Delivery Christopher B. Fox Infectious Disease Research Institute, 1124 Columbia St, Ste 400, Seattle, WA 98104, USA; E-mail: [email protected] Received: 13 August 2009; in revised form: 25 August 2009 / Accepted: 31 August 2009 / Published: 1 September 2009 Abstract: Squalene is a linear triterpene that is extensively utilized as a principal component of parenteral emulsions for drug and vaccine delivery. In this review, the chemical structure and sources of squalene are presented. Moreover, the physicochemical and biological properties of squalene-containing emulsions are evaluated in the context of parenteral formulations. Historical and current parenteral emulsion products containing squalene or squalane are discussed. The safety of squalene-based products is also addressed. Finally, analytical techniques for characterization of squalene emulsions are examined. Keywords: squalene; squalane; adjuvant; emulsion; parenteral 1. Introduction to Squalene and Emulsions Squalene is widely used for numerous vaccine and drug delivery emulsions due to its stability- enhancing effects and biocompatibility. Emulsions containing squalene facilitate solubilization, modified release, and cell uptake of drugs, adjuvants, and vaccines. Squalene and its hydrogenated form, squalane, have unique properties that are ideally suited for making stable and non-toxic nanoemulsions. Because of these characteristics, numerous squalene-based emulsions have been effectively developed for drug and vaccine applications. The chemical structure of squalene is that of a linear triterpene (Figure 1). The hydrocarbon composition of the molecule results in a highly hydrophobic nature; the calculated values for octanol/water partitioning coefficient (log P) and solubility of squalene in water are 10.67 and 0.124 mg/L, respectively [1]. -
Steroidal Triterpenes of Cholesterol Synthesis
Molecules 2013, 18, 4002-4017; doi:10.3390/molecules18044002 OPEN ACCESS molecules ISSN 1420-3049 www.mdpi.com/journal/molecules Review Steroidal Triterpenes of Cholesterol Synthesis Jure Ačimovič and Damjana Rozman * Centre for Functional Genomics and Bio-Chips, Faculty of Medicine, Institute of Biochemistry, University of Ljubljana, Zaloška 4, Ljubljana SI-1000, Slovenia; E-Mail: [email protected] * Author to whom correspondence should be addressed; E-Mail: [email protected]; Tel.: +386-1-543-7591; Fax: +386-1-543-7588. Received: 18 February 2013; in revised form: 19 March 2013 / Accepted: 27 March 2013 / Published: 4 April 2013 Abstract: Cholesterol synthesis is a ubiquitous and housekeeping metabolic pathway that leads to cholesterol, an essential structural component of mammalian cell membranes, required for proper membrane permeability and fluidity. The last part of the pathway involves steroidal triterpenes with cholestane ring structures. It starts by conversion of acyclic squalene into lanosterol, the first sterol intermediate of the pathway, followed by production of 20 structurally very similar steroidal triterpene molecules in over 11 complex enzyme reactions. Due to the structural similarities of sterol intermediates and the broad substrate specificity of the enzymes involved (especially sterol-Δ24-reductase; DHCR24) the exact sequence of the reactions between lanosterol and cholesterol remains undefined. This article reviews all hitherto known structures of post-squalene steroidal triterpenes of cholesterol synthesis, their biological roles and the enzymes responsible for their synthesis. Furthermore, it summarises kinetic parameters of enzymes (Vmax and Km) and sterol intermediate concentrations from various tissues. Due to the complexity of the post-squalene cholesterol synthesis pathway, future studies will require a comprehensive meta-analysis of the pathway to elucidate the exact reaction sequence in different tissues, physiological or disease conditions. -
Oligodendroglial Energy Metabolism and (Re)Myelination
life Review Oligodendroglial Energy Metabolism and (re)Myelination Vanja Tepavˇcevi´c Achucarro Basque Center for Neuroscience, University of the Basque Country, Parque Cientifico de la UPV/EHU, Barrio Sarriena s/n, Edificio Sede, Planta 3, 48940 Leioa, Spain; [email protected] Abstract: Central nervous system (CNS) myelin has a crucial role in accelerating the propagation of action potentials and providing trophic support to the axons. Defective myelination and lack of myelin regeneration following demyelination can both lead to axonal pathology and neurode- generation. Energy deficit has been evoked as an important contributor to various CNS disorders, including multiple sclerosis (MS). Thus, dysregulation of energy homeostasis in oligodendroglia may be an important contributor to myelin dysfunction and lack of repair observed in the disease. This article will focus on energy metabolism pathways in oligodendroglial cells and highlight differences dependent on the maturation stage of the cell. In addition, it will emphasize that the use of alternative energy sources by oligodendroglia may be required to save glucose for functions that cannot be fulfilled by other metabolites, thus ensuring sufficient energy input for both myelin synthesis and trophic support to the axons. Finally, it will point out that neuropathological findings in a subtype of MS lesions likely reflect defective oligodendroglial energy homeostasis in the disease. Keywords: energy metabolism; oligodendrocyte; oligodendrocyte progenitor cell; myelin; remyeli- nation; multiple sclerosis; glucose; ketone bodies; lactate; N-acetyl aspartate Citation: Tepavˇcevi´c,V. Oligodendroglial Energy Metabolism 1. Introduction and (re)Myelination. Life 2021, 11, Myelination is the key evolutionary event in the development of higher vertebrates. 238.