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Buzzle – Zoology Terms – Glossary of Biology Terms and Definitions Http
Buzzle – Zoology Terms – Glossary of Biology Terms and Definitions http://www.buzzle.com/articles/biology-terms-glossary-of-biology-terms-and- definitions.html#ZoologyGlossary Biology is the branch of science concerned with the study of life: structure, growth, functioning and evolution of living things. This discipline of science comprises three sub-disciplines that are botany (study of plants), Zoology (study of animals) and Microbiology (study of microorganisms). This vast subject of science involves the usage of myriads of biology terms, which are essential to be comprehended correctly. People involved in the science field encounter innumerable jargons during their study, research or work. Moreover, since science is a part of everybody's life, it is something that is important to all individuals. A Abdomen: Abdomen in mammals is the portion of the body which is located below the rib cage, and in arthropods below the thorax. It is the cavity that contains stomach, intestines, etc. Abscission: Abscission is a process of shedding or separating part of an organism from the rest of it. Common examples are that of, plant parts like leaves, fruits, flowers and bark being separated from the plant. Accidental: Accidental refers to the occurrences or existence of all those species that would not be found in a particular region under normal circumstances. Acclimation: Acclimation refers to the morphological and/or physiological changes experienced by various organisms to adapt or accustom themselves to a new climate or environment. Active Transport: The movement of cellular substances like ions or molecules by traveling across the membrane, towards a higher level of concentration while consuming energy. -
Taxon Ordering in Phylogenetic Trees by Means of Evolutionary Algorithms Francesco Cerutti1,2, Luigi Bertolotti1,2, Tony L Goldberg3 and Mario Giacobini1,2*
Cerutti et al. BioData Mining 2011, 4:20 http://www.biodatamining.org/content/4/1/20 BioData Mining RESEARCH Open Access Taxon ordering in phylogenetic trees by means of evolutionary algorithms Francesco Cerutti1,2, Luigi Bertolotti1,2, Tony L Goldberg3 and Mario Giacobini1,2* * Correspondence: mario. Abstract [email protected] 1 Department of Animal Production, Background: In in a typical “left-to-right” phylogenetic tree, the vertical order of taxa Epidemiology and Ecology, Faculty of Veterinary Medicine, University is meaningless, as only the branch path between them reflects their degree of of Torino, Via Leonardo da Vinci similarity. To make unresolved trees more informative, here we propose an 44, 10095, Grugliasco (TO), Italy innovative Evolutionary Algorithm (EA) method to search the best graphical Full list of author information is available at the end of the article representation of unresolved trees, in order to give a biological meaning to the vertical order of taxa. Methods: Starting from a West Nile virus phylogenetic tree, in a (1 + 1)-EA we evolved it by randomly rotating the internal nodes and selecting the tree with better fitness every generation. The fitness is a sum of genetic distances between the considered taxon and the r (radius) next taxa. After having set the radius to the best performance, we evolved the trees with (l + μ)-EAs to study the influence of population on the algorithm. Results: The (1 + 1)-EA consistently outperformed a random search, and better results were obtained setting the radius to 8. The (l + μ)-EAs performed as well as the (1 + 1), except the larger population (1000 + 1000). -
Transformations of Lamarckism Vienna Series in Theoretical Biology Gerd B
Transformations of Lamarckism Vienna Series in Theoretical Biology Gerd B. M ü ller, G ü nter P. Wagner, and Werner Callebaut, editors The Evolution of Cognition , edited by Cecilia Heyes and Ludwig Huber, 2000 Origination of Organismal Form: Beyond the Gene in Development and Evolutionary Biology , edited by Gerd B. M ü ller and Stuart A. Newman, 2003 Environment, Development, and Evolution: Toward a Synthesis , edited by Brian K. Hall, Roy D. Pearson, and Gerd B. M ü ller, 2004 Evolution of Communication Systems: A Comparative Approach , edited by D. Kimbrough Oller and Ulrike Griebel, 2004 Modularity: Understanding the Development and Evolution of Natural Complex Systems , edited by Werner Callebaut and Diego Rasskin-Gutman, 2005 Compositional Evolution: The Impact of Sex, Symbiosis, and Modularity on the Gradualist Framework of Evolution , by Richard A. Watson, 2006 Biological Emergences: Evolution by Natural Experiment , by Robert G. B. Reid, 2007 Modeling Biology: Structure, Behaviors, Evolution , edited by Manfred D. Laubichler and Gerd B. M ü ller, 2007 Evolution of Communicative Flexibility: Complexity, Creativity, and Adaptability in Human and Animal Communication , edited by Kimbrough D. Oller and Ulrike Griebel, 2008 Functions in Biological and Artifi cial Worlds: Comparative Philosophical Perspectives , edited by Ulrich Krohs and Peter Kroes, 2009 Cognitive Biology: Evolutionary and Developmental Perspectives on Mind, Brain, and Behavior , edited by Luca Tommasi, Mary A. Peterson, and Lynn Nadel, 2009 Innovation in Cultural Systems: Contributions from Evolutionary Anthropology , edited by Michael J. O ’ Brien and Stephen J. Shennan, 2010 The Major Transitions in Evolution Revisited , edited by Brett Calcott and Kim Sterelny, 2011 Transformations of Lamarckism: From Subtle Fluids to Molecular Biology , edited by Snait B. -
A General Criterion for Translating Phylogenetic Trees Into Linear Sequences
A general criterion for translating phylogenetic trees into linear sequences Proposal (474) to South American Classification Committee In most of the books, papers and check-lists of birds (e.g. Meyer de Schauensee 1970, Stotz et al. 1996; and other taxa e.g. Lewis et al. 2005, Haston et al. 2009, for plants), at least the higher taxa are arranged phylogenetically, with the “oldest” groups (Rheiformes/Tinamiformes) placed first, and the “modern” birds (Passeriformes) at the end. The molecular phylogenetic analysis of Hackett et al. (2008) supports this criterion. For this reason, it would be desirable that in the SACC list not only orders and families, but also genera within families and species within genera, are phylogenetically ordered. In spite of the SACC’s efforts in producing an updated phylogeny-based list, it is evident that there are differences in the way the phylogenetic information has been translated into linear sequences, mainly for node rotation and polytomies. This is probably one of the reasons why Douglas Stotz (Proposal #423) has criticized using sequence to show relationships. He considers that we are creating unstable sequences with little value in terms of understanding of relationships. He added, “We would be much better served by doing what most taxonomic groups do and placing taxa within the hierarchy in alphabetical order, making no pretense that sequence can provide useful information on the branching patterns of trees. This would greatly stabilize sequences and not cost much information about relationships”. However, we encourage creating sequences that reflect phylogeny as much as possible at all taxonomic levels (although we agree with Douglas Stotz that the translation of a phylogenetic tree into a simple linear sequence inevitably involves a loss of information about relationships that is present in the trees on which the sequence is based). -
New Data on the Jaw Apparatus of Fossil Cephalopods
New dataon the jaw apparatus of fossil cephalopods YURI D. ZAKHAROV AND TAMAZ A. LOMINADZE \ Zakharov, Yuri D. & Lominadze, Tamaz A. 19830115: New data on the jaw apparatus of fossil LETHAIA cephalopods. Lethaia, Vol. 16, pp. 67-78. Oslo. ISSN 0024-1164. A newly discovered fossil cephalopod jaw apparatus that may belong to Permian representatives of the Endocochlia is described. Permorhynchus dentatus n. gen. n. sp. is established on the basis of this ~ apparatus. The asymmetry of jaws in the Ectocochlia may be connected with the double function of the ventral jaw apparatus, and the well-developed, relatively large frontal plate of the ventral jaw should be regarded as a feature common to all representatives of ectocochlian cephalopods evolved from early Palaeozoic stock. Distinct features seen in the jaw apparatus of Upper Pcrmian cndocochlians include the pronounced beak form of both jaws and the presence of oblong wings on the ventral mandible. o Cephalopoda. jaw. operculum. aptychus, anaptychus, Permorhynchus n.gen.• evolution. Permian. Yuri D. Zakharov llOpllll Ilscumpueeu« Gaxapoe], Institute of Biology and Pedology, Far-Eastern Scientific Centre. USSR Academy of Science, Vladivostok 690022, USSR (EUOJl020-n9~BnlHbliiuucmu my m Ilaot.neeocmo-cnoro Ha."~H020 uenmpav Axaoeuuu 'HayK CCCP, Bnaoueocmo« 690022, CCCP); Tamaz A. Lominadze ITa.'W3 Apl.j1L10BUl.j Jlouunaoee), Institute of Palaeobiology of Georgian SSR Academy of Science. Tbilisi 380004. USSR (Hncmumvm naJle06UOJl02UU Atcaoeuuu naytc TpY3UHUjKOii CCP. T6'LJUCU 380004. CCP; 19th August. 1980 (revised 1982 06 28). The jaw apparatus of Recent cephalopods is re Turek 1978, Fig. 7, but not the reconstruction in presented by two jaw elements (Fig. -
Glossary - Zoology - Intro
1 Glossary - Zoology - Intro Abdomen: Posterior part of an arthropoda’ body; in vertebrates: abdomen between thorax and pelvic girdle. Acoelous: See coelom. Amixia: A restriction that prevents general intercrossing in a species leading to inbreeding. Anabiosis: Resuscitation after apparent death. Archenteron: See coelom. Aulotomy: Capacity of separating a limb; followed by regeneration; used also for asexual reproduction; see also fissipary (in echinodermata and platyhelminthes). Basal Lamina: Basal plate of developing neural tube; the noncellular, collagenous layer that separates an epithelium from an underlying layer of tissue; also basal membrane. Benthic: Organisms that live on ocean bottoms. Blastocoel: See coelom. Blastula: Stage of embryonic development, at / near the end of cleavage, preceding gastrulation; generally consisting of a hollow ball of cells (coeloblastula); if no blastoceol is present it is termed stereoblastulae (arise from isolecithal and moderately telolecithal ova); in meroblastic cleavage (only the upper part of the zygote is divided), the blastula consists of a disc of cells lying on top of the yolk mass; the blastocoel is reduced to the space separating the cells from the yolk mass. Blastoporus: The opening into the archenteron (the primitive gastric cavity of the gastrula = gastrocoel) developed by the invagination of the blastula = protostoma. Cephalisation: (Gk. kephale, little head) A type of animal body plan or organization in which one end contains a nerve-rich region and functions as a head. Cilium: (pl. cilia, long eyelash) A short, centriole-based, hairlike organelle: Rows of cilia propel certain protista. Cilia also aid the movement of substances across epithelial surfaces of animal cells. Cleavage: The zygote undergoes a series of rapid, synchronous mitotic divisions; results in a ball of many cells. -
PUBLICATIONS by JAMES SPRINKLE 1965 -- Sprinkle, James
PUBLICATIONS BY JAMES SPRINKLE 1965 -- Sprinkle, James. 1965. Stratigraphy and sedimentary petrology of the lower Lodgepole Formation of southwestern Montana. M.I.T. Department of Geology and Geophysics, unpublished Senior Thesis, 29 p. (see #56 and 66 below) 1966 1. Sprinkle, James and Gutschick, R. C. 1966. Blastoids from the Sappington Formation of southwest Montana (Abst.). Geological Society of America Special Paper 87:163-164. 1967 2. Sprinkle, James and Gutschick, R. C. 1967. Costatoblastus, a channel fill blastoid from the Sappington Formation of Montana. Journal of Paleon- tology, 41(2):385-402. 1968 3. Sprinkle, James. 1968. The "arms" of Caryocrinites, a Silurian rhombiferan cystoid (Abst.). Geological Society of America Special Paper 115:210. 1969 4. Sprinkle, James. 1969. The early evolution of crinozoan and blastozoan echinoderms (Abst.). Geological Society of America Special Paper 121:287-288. 5. Robison, R. A. and Sprinkle, James. 1969. A new echinoderm from the Middle Cambrian of Utah (Abst.). Geological Society of America Abstracts with Programs, 1(5):69. 6. Robison, R. A. and Sprinkle, James. 1969. Ctenocystoidea: new class of primitive echinoderms. Science, 166(3912):1512-1514. 1970 -- Sprinkle, James. 1970. Morphology and Evolution of Blastozoan Echino- derms. Harvard University Department of Geological Sciences, unpublished Ph.D. Thesis, 433 p. (see #8 below) 1971 7. Sprinkle, James. 1971. Stratigraphic distribution of echinoderm plates in the Antelope Valley Limestone of Nevada and California. U.S. Geological Survey Professional Paper 750-D (Geological Survey Research 1971):D89-D98. 1973 8. Sprinkle, James. 1973. Morphology and Evolution of Blastozoan Echino- derms. Harvard University, Museum of Comparative Zoology Special Publication, 283 p. -
Biology Has Been Taught at Bristol – As Botany and Zoology – Since Before the University Was Founded in 1909
Biology has been taught at Bristol – as Botany and Zoology – since before the University was founded in 1909. Bristol has made significant contributions to many fields, from animal cognition and medicinal plants to entomology, evolutionary Game Theory and bird flight – and the BBC Natural History Unit's proximity to the University has led to television careers for a number of graduates! In 1876, University College, the precursor to the University, appointed Dr. Frederick Adolph Leipner as Lecturer in Botany, Zoology and, amusingly, German. Leipner had trained at the Bristol Medical School, but taught botany and natural philosophy, later combining this with teaching in Vegetable Physiology at the Medical School. He became Professor of Botany in 1884 and was a founding member of the Bristol Naturalists' Society, becoming its President in 1893. Bristol today is proud of its interdisciplinary strengths and, among others, offers Joint Honours Degrees in Geology and Biology, and in Psychology and Zoology. A portent of these modern links is seen in one of the University's most notable early appointments, Conwy Lloyd Morgan, appointed as Professor of Zoology and Geology in 1884 and then – somehow fitting in service as Vice- Chancellor – becoming the first Chair in Psychology (and Ethics). Lloyd Morgan is most famous as a pioneer of the study of comparative animal cognition. He was a highly influential figure for the North American Behaviourist movement: “Lloyd Morgan's cannon” is a comparative psychologist's version of Occam's Razor whereby no behaviour should be ascribed to more complex cognitive mechanisms than strictly necessary. He was the first Fellow of the Royal Society to be elected for psychological work. -
Dorset and East Devon Coast for Inclusion in the World Heritage List
Nomination of the Dorset and East Devon Coast for inclusion in the World Heritage List © Dorset County Council 2000 Dorset County Council, Devon County Council and the Dorset Coast Forum June 2000 Published by Dorset County Council on behalf of Dorset County Council, Devon County Council and the Dorset Coast Forum. Publication of this nomination has been supported by English Nature and the Countryside Agency, and has been advised by the Joint Nature Conservation Committee and the British Geological Survey. Maps reproduced from Ordnance Survey maps with the permission of the Controller of HMSO. © Crown Copyright. All rights reserved. Licence Number: LA 076 570. Maps and diagrams reproduced/derived from British Geological Survey material with the permission of the British Geological Survey. © NERC. All rights reserved. Permit Number: IPR/4-2. Design and production by Sillson Communications +44 (0)1929 552233. Cover: Duria antiquior (A more ancient Dorset) by Henry De la Beche, c. 1830. The first published reconstruction of a past environment, based on the Lower Jurassic rocks and fossils of the Dorset and East Devon Coast. © Dorset County Council 2000 In April 1999 the Government announced that the Dorset and East Devon Coast would be one of the twenty-five cultural and natural sites to be included on the United Kingdom’s new Tentative List of sites for future nomination for World Heritage status. Eighteen sites from the United Kingdom and its Overseas Territories have already been inscribed on the World Heritage List, although only two other natural sites within the UK, St Kilda and the Giant’s Causeway, have been granted this status to date. -
Reinterpretation of the Enigmatic Ordovician Genus Bolboporites (Echinodermata)
Reinterpretation of the enigmatic Ordovician genus Bolboporites (Echinodermata). Emeric Gillet, Bertrand Lefebvre, Véronique Gardien, Emilie Steimetz, Christophe Durlet, Frédéric Marin To cite this version: Emeric Gillet, Bertrand Lefebvre, Véronique Gardien, Emilie Steimetz, Christophe Durlet, et al.. Reinterpretation of the enigmatic Ordovician genus Bolboporites (Echinodermata).. Zoosymposia, Magnolia Press, 2019, 15 (1), pp.44-70. 10.11646/zoosymposia.15.1.7. hal-02333918 HAL Id: hal-02333918 https://hal.archives-ouvertes.fr/hal-02333918 Submitted on 13 Nov 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. 1 Reinterpretation of the Enigmatic Ordovician Genus Bolboporites 2 (Echinodermata) 3 4 EMERIC GILLET1, BERTRAND LEFEBVRE1,3, VERONIQUE GARDIEN1, EMILIE 5 STEIMETZ2, CHRISTOPHE DURLET2 & FREDERIC MARIN2 6 7 1 Université de Lyon, UCBL, ENSL, CNRS, UMR 5276 LGL-TPE, 2 rue Raphaël Dubois, F- 8 69622 Villeurbanne, France 9 2 Université de Bourgogne - Franche Comté, CNRS, UMR 6282 Biogéosciences, 6 boulevard 10 Gabriel, F-2100 Dijon, France 11 3 Corresponding author, E-mail: [email protected] 12 13 Abstract 14 Bolboporites is an enigmatic Ordovician cone-shaped fossil, the precise nature and systematic affinities of 15 which have been controversial over almost two centuries. -
Plated Cambrian Bilaterians Reveal the Earliest Stages of Echinoderm Evolution
Zamora, S., Rahman, I. A., & Smith, A. B. (2012). Plated Cambrian bilaterians reveal the earliest stages of echinoderm evolution. PLoS ONE, 7(6), [e38296]. https://doi.org/10.1371/journal.pone.0038296 Publisher's PDF, also known as Version of record Link to published version (if available): 10.1371/journal.pone.0038296 Link to publication record in Explore Bristol Research PDF-document University of Bristol - Explore Bristol Research General rights This document is made available in accordance with publisher policies. Please cite only the published version using the reference above. Full terms of use are available: http://www.bristol.ac.uk/red/research-policy/pure/user-guides/ebr-terms/ Plated Cambrian Bilaterians Reveal the Earliest Stages of Echinoderm Evolution Samuel Zamora1, Imran A. Rahman2, Andrew B. Smith1* 1 Department of Palaeontology, The Natural History Museum, London, United Kingdom, 2 School of Geography, Earth & Environmental Sciences, University of Birmingham, Edgbaston, Birmingham, United Kingdom Abstract Echinoderms are unique in being pentaradiate, having diverged from the ancestral bilaterian body plan more radically than any other animal phylum. This transformation arises during ontogeny, as echinoderm larvae are initially bilateral, then pass through an asymmetric phase, before giving rise to the pentaradiate adult. Many fossil echinoderms are radial and a few are asymmetric, but until now none have been described that show the original bilaterian stage in echinoderm evolution. Here we report new fossils from the early middle Cambrian of southern Europe that are the first echinoderms with a fully bilaterian body plan as adults. Morphologically they are intermediate between two of the most basal classes, the Ctenocystoidea and Cincta. -
Tayside, Central and Fife Tayside, Central and Fife
Detail of the Lower Devonian jawless, armoured fish Cephalaspis from Balruddery Den. © Perth Museum & Art Gallery, Perth & Kinross Council Review of Fossil Collections in Scotland Tayside, Central and Fife Tayside, Central and Fife Stirling Smith Art Gallery and Museum Perth Museum and Art Gallery (Culture Perth and Kinross) The McManus: Dundee’s Art Gallery and Museum (Leisure and Culture Dundee) Broughty Castle (Leisure and Culture Dundee) D’Arcy Thompson Zoology Museum and University Herbarium (University of Dundee Museum Collections) Montrose Museum (Angus Alive) Museums of the University of St Andrews Fife Collections Centre (Fife Cultural Trust) St Andrews Museum (Fife Cultural Trust) Kirkcaldy Galleries (Fife Cultural Trust) Falkirk Collections Centre (Falkirk Community Trust) 1 Stirling Smith Art Gallery and Museum Collection type: Independent Accreditation: 2016 Dumbarton Road, Stirling, FK8 2KR Contact: [email protected] Location of collections The Smith Art Gallery and Museum, formerly known as the Smith Institute, was established at the bequest of artist Thomas Stuart Smith (1815-1869) on land supplied by the Burgh of Stirling. The Institute opened in 1874. Fossils are housed onsite in one of several storerooms. Size of collections 700 fossils. Onsite records The CMS has recently been updated to Adlib (Axiel Collection); all fossils have a basic entry with additional details on MDA cards. Collection highlights 1. Fossils linked to Robert Kidston (1852-1924). 2. Silurian graptolite fossils linked to Professor Henry Alleyne Nicholson (1844-1899). 3. Dura Den fossils linked to Reverend John Anderson (1796-1864). Published information Traquair, R.H. (1900). XXXII.—Report on Fossil Fishes collected by the Geological Survey of Scotland in the Silurian Rocks of the South of Scotland.