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LONGFIN SMELT Spirinchus Thaleichthys USFWS: None CDFG: Threatened
LSA ASSOCIATES, INC. PUBLIC DRAFT SOLANO HCP JULY 2012 SOLANO COUNTY WATER AGENCY NATURAL COMMUNITY AND SPECIES ACCOUNTS LONGFIN SMELT Spirinchus thaleichthys USFWS: None CDFG: Threatened Species Account Status and Description. The longfin smelt is listed as a threatened species by the California Fish and Game Commission. Abundance of the longfin smelt has reached record lows in the San Francisco-Delta population, and the species may already be extinct in some northern California estuarine populations, resulting in an overall threat of extinction to the species within California (Federal Register 2008). The longfin smelt was also proposed for federal listing, but on April 8, 2009 the USFWS determined that the San Francisco Bay Estuary population does not qualify for listing as a distinct population segment under federal regulations. Further assessment of the entire population is being conducted, however, and future listing may be considered. Photo courtesy of California Department of Fish and Game Longfin smelt, once mature, are slim, silver fish in the family Osmeridae (true smelts). Moyle (2002) describes the species as being 90-110 mm (standard length) at maturity, with a translucent silver appearance along the sides of the body, and an olive to iridescent pinkish hue on the back. Mature males are often darker than females, with enlarged and stiffened dorsal and anal fins, a dilated lateral line region, and breeding tubercles on paired fins and scares. Longfin smelt can be distinguished from other California smelt by their long pectoral fins (which reach or nearly reach the bases of the pelvic fins), incomplete lateral line, weak or absent striations on the opercular bones, low number of scales in the lateral line (54-65) and long maxillary bones (which in adults extent just short of the posterior margin of the eye). -
Edna Assay Development
Environmental DNA assays available for species detection via qPCR analysis at the U.S.D.A Forest Service National Genomics Center for Wildlife and Fish Conservation (NGC). Asterisks indicate the assay was designed at the NGC. This list was last updated in June 2021 and is subject to change. Please contact [email protected] with questions. Family Species Common name Ready for use? Mustelidae Martes americana, Martes caurina American and Pacific marten* Y Castoridae Castor canadensis American beaver Y Ranidae Lithobates catesbeianus American bullfrog Y Cinclidae Cinclus mexicanus American dipper* N Anguillidae Anguilla rostrata American eel Y Soricidae Sorex palustris American water shrew* N Salmonidae Oncorhynchus clarkii ssp Any cutthroat trout* N Petromyzontidae Lampetra spp. Any Lampetra* Y Salmonidae Salmonidae Any salmonid* Y Cottidae Cottidae Any sculpin* Y Salmonidae Thymallus arcticus Arctic grayling* Y Cyrenidae Corbicula fluminea Asian clam* N Salmonidae Salmo salar Atlantic Salmon Y Lymnaeidae Radix auricularia Big-eared radix* N Cyprinidae Mylopharyngodon piceus Black carp N Ictaluridae Ameiurus melas Black Bullhead* N Catostomidae Cycleptus elongatus Blue Sucker* N Cichlidae Oreochromis aureus Blue tilapia* N Catostomidae Catostomus discobolus Bluehead sucker* N Catostomidae Catostomus virescens Bluehead sucker* Y Felidae Lynx rufus Bobcat* Y Hylidae Pseudocris maculata Boreal chorus frog N Hydrocharitaceae Egeria densa Brazilian elodea N Salmonidae Salvelinus fontinalis Brook trout* Y Colubridae Boiga irregularis Brown tree snake* -
Questions and Answers About Water Diversions and Delta Smelt Protections
Questions and Answers about Water Diversions and Delta Smelt Protections California Natural Resources Agency February 12, 2013 What’s the problem? Over the course of the last decade, populations of several fish species in the Sacramento-San Joaquin River Delta have declined to extremely low levels. In some cases, particularly Delta smelt, these declines have triggered requirements under the U.S. Endangered Species Act and California Endangered Species Act to curtail pumping rates at the federal and state water project pumping facilities in the south Delta. Starting in mid-December, the appearance of smelt at the fish-salvage operations near the pumping plants has triggered a significant reduction in the volume of water the water projects can convey to farms and cities in Southern California, the Central Valley, and the San Francisco Bay Area. Significant winter storms in the next couple of months could change the situation, but the pumping curtailment of recent weeks makes it more likely that in the coming year, many urban and farm water districts will have to either rely more heavily on other water sources or make do with a reduced supply by, for example, planting fewer acres of crops. How are decisions regarding pumping cuts made? Operations of the water project pumps are regulated to comply with endangered species law through “biological opinions” issued by federal regulatory agencies. In 2007, a federal court found that existing biological opinions written to protect Delta smelt and several runs of anadromous fish were inadequate. As a result, two new biological opinions were written. The biological opinion that is controlling pumping rates now is a 2008 biological opinion by the U.S. -
Endangered Species
FEATURE: ENDANGERED SPECIES Conservation Status of Imperiled North American Freshwater and Diadromous Fishes ABSTRACT: This is the third compilation of imperiled (i.e., endangered, threatened, vulnerable) plus extinct freshwater and diadromous fishes of North America prepared by the American Fisheries Society’s Endangered Species Committee. Since the last revision in 1989, imperilment of inland fishes has increased substantially. This list includes 700 extant taxa representing 133 genera and 36 families, a 92% increase over the 364 listed in 1989. The increase reflects the addition of distinct populations, previously non-imperiled fishes, and recently described or discovered taxa. Approximately 39% of described fish species of the continent are imperiled. There are 230 vulnerable, 190 threatened, and 280 endangered extant taxa, and 61 taxa presumed extinct or extirpated from nature. Of those that were imperiled in 1989, most (89%) are the same or worse in conservation status; only 6% have improved in status, and 5% were delisted for various reasons. Habitat degradation and nonindigenous species are the main threats to at-risk fishes, many of which are restricted to small ranges. Documenting the diversity and status of rare fishes is a critical step in identifying and implementing appropriate actions necessary for their protection and management. Howard L. Jelks, Frank McCormick, Stephen J. Walsh, Joseph S. Nelson, Noel M. Burkhead, Steven P. Platania, Salvador Contreras-Balderas, Brady A. Porter, Edmundo Díaz-Pardo, Claude B. Renaud, Dean A. Hendrickson, Juan Jacobo Schmitter-Soto, John Lyons, Eric B. Taylor, and Nicholas E. Mandrak, Melvin L. Warren, Jr. Jelks, Walsh, and Burkhead are research McCormick is a biologist with the biologists with the U.S. -
First Records of the Night Smelt, Spirinchus Starksi, in the Salish Sea
First Records of the Night Smelt, Spirinchus starksi, in the Salish Sea, Washington Author(s): Melanie M Paquin , Anna N Kagley , Kurt L Fresh , and James W Orr Source: Northwestern Naturalist, 95(1):40-43. 2014. Published By: Society for Northwestern Vertebrate Biology DOI: http://dx.doi.org/10.1898/NWN13-05.1 URL: http://www.bioone.org/doi/full/10.1898/NWN13-05.1 BioOne (www.bioone.org) is a nonprofit, online aggregation of core research in the biological, ecological, and environmental sciences. BioOne provides a sustainable online platform for over 170 journals and books published by nonprofit societies, associations, museums, institutions, and presses. Your use of this PDF, the BioOne Web site, and all posted and associated content indicates your acceptance of BioOne’s Terms of Use, available at www.bioone.org/ page/terms_of_use. Usage of BioOne content is strictly limited to personal, educational, and non- commercial use. Commercial inquiries or rights and permissions requests should be directed to the individual publisher as copyright holder. BioOne sees sustainable scholarly publishing as an inherently collaborative enterprise connecting authors, nonprofit publishers, academic institutions, research libraries, and research funders in the common goal of maximizing access to critical research. 40 NORTHWESTERN NATURALIST 95(1) NORTHWESTERN NATURALIST 95:40–43 SPRING 2014 FIRST RECORDS OF THE NIGHT SMELT, SPIRINCHUS STARKSI, IN THE SALISH SEA, WASHINGTON MELANIE MPAQUIN,ANNA NKAGLEY,KURT LFRESH, AND JAMES WORR Key words: COI, distribution, genetics, (frozen or preserved in ethanol) from 11 S. starksi Longfin Smelt, Night Smelt, Osmeridae, Spir- and 5 S. thaleichthys were obtained from the inchus starksi, Spirinchus thaleichthys, Washing- Northwest Fisheries Science Center (NWFSC) ton and the University of Washington Fish Collec- tion (UW). -
Appendix B: CNDDB, CNPS, and USFWS Database Searches
City of Hercules—Willow Avenue Commercial Center Project Initial Study/Mitigated Negative Declaration Appendix B: CNDDB, CNPS, and USFWS Database Searches FirstCarbon Solutions Y:\Publications\Client (PN-JN)\4673\46730012\ISMND\46730012 Hercules Willow Ave ISMND.docx THIS PAGE INTENTIONALLY LEFT BLANK Selected Elements by Scientific Name California Department of Fish and Wildlife California Natural Diversity Database Query Criteria: Quad<span style='color:Red'> IS </span>(Mare Island (3812213))<br /><span style='color:Red'> AND </span>County<span style='color:Red'> IS </span>(Contra Costa) Rare Plant Rank/CDFW Species Element Code Federal Status State Status Global Rank State Rank SSC or FP Antrozous pallidus AMACC10010 None None G5 S3 SSC pallid bat Bombus occidentalis IIHYM24250 None None G2G3 S1 western bumble bee Chloropyron molle ssp. molle PDSCR0J0D2 Endangered Rare G2T1 S1 1B.2 soft salty bird's-beak Danaus plexippus pop. 1 IILEPP2012 None None G4T2T3 S2S3 monarch - California overwintering population Hypomesus transpacificus AFCHB01040 Threatened Endangered G1 S1 Delta smelt Isocoma arguta PDAST57050 None None G1 S1 1B.1 Carquinez goldenbush Laterallus jamaicensis coturniculus ABNME03041 None Threatened G3G4T1 S1 FP California black rail Melospiza melodia samuelis ABPBXA301W None None G5T2 S2 SSC San Pablo song sparrow Northern Coastal Salt Marsh CTT52110CA None None G3 S3.2 Northern Coastal Salt Marsh Pandion haliaetus ABNKC01010 None None G5 S4 WL osprey Rallus obsoletus obsoletus ABNME05016 Endangered Endangered G5T1 S1 FP California Ridgway's rail Rana draytonii AAABH01022 Threatened None G2G3 S2S3 SSC California red-legged frog Spirinchus thaleichthys AFCHB03010 Candidate Threatened G5 S1 SSC longfin smelt Xanthocephalus xanthocephalus ABPBXB3010 None None G5 S3 SSC yellow-headed blackbird Record Count: 14 Commercial Version -- Dated December, 1 2017 -- Biogeographic Data Branch Page 1 of 1 Report Printed on Thursday, December 21, 2017 Information Expires 6/1/2018 Plant List Inventory of Rare and Endangered Plants 8 matches found. -
Drought and the Delta – a “Deep Dive” Into Impacts
DroughtDrought andand thethe DeltaDelta – A “Deep Dive” into Impacts – Sponsored by Drought and the Delta – A “Deep Dive” into Impacts CONTENTS Introduction: The Sacramento-San Joaquin Delta and Drought ................................3 Resource Management .....................................................................................................................................9 Case Study: Contra Costa Water District Operations ..........................................................12 Ecosystem Effects ................................................................................................................................................14 Cast Study: The Importance of Floodplains ................................................................................20 Water Quality ..........................................................................................................................................................21 Agriculture ................................................................................................................................................................26 Case Study: McCormack Sheep and Grain ....................................................................................29 Policy ..............................................................................................................................................................................31 “Drought and the Delta” Presenters: • “Drought and the Delta” Jay Lund, Director, Center for Watershed Sciences, -
PREHISTORIC FORAGING PATTERNS at CA-SAC-47 SACRAMENTO COUNTY, CALIFORNIA a Thesis Presented to the Faculty of the Department Of
PREHISTORIC FORAGING PATTERNS AT CA-SAC-47 SACRAMENTO COUNTY, CALIFORNIA A Thesis Presented to the Faculty of the Department of Anthropology California State University, Sacramento Submitted in partial satisfaction of the requirements for the degree of MASTER OF ARTS in Anthropology by Justin Blake Cairns SUMMER 2016 © 2016 Justin Blake Cairns ALL RIGHTS RESERVED ii PREHISTORIC FORAGING PATTERNS AT CA-SAC-47 SACRAMENTO COUNTY, CALIFORNIA A Thesis by Justin Blake Cairns Approved by: ________________________________, Committee Chair Mark E. Basgall, Ph.D. ________________________________, Second Reader Jacob L. Fisher, Ph.D. ____________________________ Date iii Student: Justin Blake Cairns I certify that this student has met the requirements for format contained in the University format manual, and that this thesis is suitable for shelving in the Library and credit is to be awarded for the thesis. __________________________________, Graduate Coordinator _______________ Jacob Fisher, Ph.D. Date Department of Anthropology iv Abstract of PREHISTORIC FORAGING PATTERNS AT CA-SAC-47 SACRAMENTO COUNTY, CALIFORNIA by Justin Blake Cairns Subsistence studies conducted on regional archaeological deposits indicate that in the Sacramento Delta, as in the rest of the Central Valley, there is a decrease in foraging efficiency during the Late Period. A recently excavated site, CA-SAC-47, provides direct evidence of subsistence strategies in the form of faunal and plant remains. This faunal assemblage is compared to direct evidence of subsistence from Delta sites SAC-42, SAC-43, SAC-65, SAC-145, and SAC-329. The results and implications of this direct evidence are used to address site variability and resource selectivity. ___________________________________, Committee Chair Mark E. -
LATE MIOCENE FISHES of the CACHE VALLEY MEMBER, SALT LAKE FORMATION, UTAH and IDAHO By
LATE MIOCENE FISHES OF THE CACHE VALLEY MEMBER, SALT LAKE FORMATION, UTAH AND IDAHO by PATRICK H. MCCLELLAN AND GERALD R. SMITH MISCELLANEOUS PUBLICATIONS MUSEUM OF ZOOLOGY, UNIVERSITY OF MICHIGAN, 208 Ann Arbor, December 17, 2020 ISSN 0076-8405 P U B L I C A T I O N S O F T H E MUSEUM OF ZOOLOGY, UNIVERSITY OF MICHIGAN NO. 208 GERALD SMITH, Editor The publications of the Museum of Zoology, The University of Michigan, consist primarily of two series—the Miscellaneous Publications and the Occasional Papers. Both series were founded by Dr. Bryant Walker, Mr. Bradshaw H. Swales, and Dr. W. W. Newcomb. Occasionally the Museum publishes contributions outside of these series. Beginning in 1990 these are titled Special Publications and Circulars and each is sequentially numbered. All submitted manuscripts to any of the Museum’s publications receive external peer review. The Occasional Papers, begun in 1913, serve as a medium for original studies based principally upon the collections in the Museum. They are issued separately. When a sufficient number of pages has been printed to make a volume, a title page, table of contents, and an index are supplied to libraries and individuals on the mailing list for the series. The Miscellaneous Publications, initiated in 1916, include monographic studies, papers on field and museum techniques, and other contributions not within the scope of the Occasional Papers, and are published separately. Each number has a title page and, when necessary, a table of contents. A complete list of publications on Mammals, Birds, Reptiles and Amphibians, Fishes, I nsects, Mollusks, and other topics is available. -
A History of the Salmonid Decline in the Russian River
A HISTORY OF THE SALMONID DECLINE IN THE RUSSIAN RIVER A Cooperative Project Sponsored by Sonoma County Water Agency California State Coastal Conservancy Steiner Environmental Consulting Prepared by Steiner Environmental Consulting August 1996 Steiner Environmental Consulting Fisheries, Wildlife, and Environmental Quality P. O. Box 250 Potter Valley, CA 95469 A HISTORY OF THE SALMONID DECLINE IN THE RUSSIAN RIVER A Cooperative Project Sponsored By Sonoma County Water Agency California State Coastal Conservancy Steiner Environmental Consulting Prepared by Steiner Environmental Consulting P.O. Box 250 Potter Valley, CA 95469 August 1996 (707) 743-1815 (707) 743-1816 f«x [email protected] EXECUTIVE SUMMARY BACKGROUND Introduction This report gathers together the best available information to provide the historical and current status of chinook salmon, coho salmon, pink salmon, and steelhead in the Russian River basin. Although the historical records are limited, all sources depict a river system where the once dominant salmonids have declined dramatically. The last 150 years of human activities have transformed the Russian River basin into a watershed heavily altered by agriculture and urban development. Flows in the main river channel river are heavily regulated. The result is a river system with significantly compromised biological functions. The anthropogenic factors contributing to the decline of salmonids are discussed. Study Area The 1,485 square mile Russian River watershed, roughly 80 miles long and 10 to 30 miles wide, lies in Mendocino, Sonoma, and Lake counties. The basin topography is characterized by a sequence of northwest/southeast trending fault-block ridges and alluvial valleys. Lying within a region of Mediterranean climate, the watershed is divided into a fog-influenced coastal region and an interior region of hot, dry summers. -
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Humboldt Bay Fishes
Humboldt Bay Fishes ><((((º>`·._ .·´¯`·. _ .·´¯`·. ><((((º> ·´¯`·._.·´¯`·.. ><((((º>`·._ .·´¯`·. _ .·´¯`·. ><((((º> Acknowledgements The Humboldt Bay Harbor District would like to offer our sincere thanks and appreciation to the authors and photographers who have allowed us to use their work in this report. Photography and Illustrations We would like to thank the photographers and illustrators who have so graciously donated the use of their images for this publication. Andrey Dolgor Dan Gotshall Polar Research Institute of Marine Sea Challengers, Inc. Fisheries And Oceanography [email protected] [email protected] Michael Lanboeuf Milton Love [email protected] Marine Science Institute [email protected] Stephen Metherell Jacques Moreau [email protected] [email protected] Bernd Ueberschaer Clinton Bauder [email protected] [email protected] Fish descriptions contained in this report are from: Froese, R. and Pauly, D. Editors. 2003 FishBase. Worldwide Web electronic publication. http://www.fishbase.org/ 13 August 2003 Photographer Fish Photographer Bauder, Clinton wolf-eel Gotshall, Daniel W scalyhead sculpin Bauder, Clinton blackeye goby Gotshall, Daniel W speckled sanddab Bauder, Clinton spotted cusk-eel Gotshall, Daniel W. bocaccio Bauder, Clinton tube-snout Gotshall, Daniel W. brown rockfish Gotshall, Daniel W. yellowtail rockfish Flescher, Don american shad Gotshall, Daniel W. dover sole Flescher, Don stripped bass Gotshall, Daniel W. pacific sanddab Gotshall, Daniel W. kelp greenling Garcia-Franco, Mauricio louvar