Supplemental Table 1A. Differential Gene Expression Profile of Adehcd40l and Adehnull Treated Cells Vs Untreated Cells
Total Page:16
File Type:pdf, Size:1020Kb
Supplemental Table 1a. Differential Gene Expression Profile of AdEHCD40L and AdEHNull treated cells vs Untreated Cells Fold change Regulation Fold change Regulation ([AdEHCD40L] vs ([AdEHCD40L] ([AdEHNull] vs ([AdEHNull] vs Probe Set ID [Untreated]) vs [Untreated]) [Untreated]) [Untreated]) Gene Symbol Gene Title RefSeq Transcript ID NM_001039468 /// NM_001039469 /// NM_004954 /// 203942_s_at 2.02 down 1.00 down MARK2 MAP/microtubule affinity-regulating kinase 2 NM_017490 217985_s_at 2.09 down 1.00 down BAZ1A fibroblastbromodomain growth adjacent factor receptorto zinc finger 2 (bacteria-expressed domain, 1A kinase, keratinocyte NM_013448 /// NM_182648 growth factor receptor, craniofacial dysostosis 1, Crouzon syndrome, Pfeiffer 203638_s_at 2.10 down 1.01 down FGFR2 syndrome, Jackson-Weiss syndrome) NM_000141 /// NM_022970 1570445_a_at 2.07 down 1.01 down LOC643201 hypothetical protein LOC643201 XM_001716444 /// XM_001717933 /// XM_932161 231763_at 3.05 down 1.02 down POLR3A polymerase (RNA) III (DNA directed) polypeptide A, 155kDa NM_007055 1555368_x_at 2.08 down 1.04 down ZNF479 zinc finger protein 479 NM_033273 /// XM_001714591 /// XM_001719979 241627_x_at 2.15 down 1.05 down FLJ10357 hypothetical protein FLJ10357 NM_018071 223208_at 2.17 down 1.06 down KCTD10 potassium channel tetramerisation domain containing 10 NM_031954 219923_at 2.09 down 1.07 down TRIM45 tripartite motif-containing 45 NM_025188 242772_x_at 2.03 down 1.07 down Transcribed locus 233019_at 2.19 down 1.08 down CNOT7 CCR4-NOT transcription complex, subunit 7 NM_013354 /// NM_054026 223139_s_at 2.09 down 1.08 down DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 NM_001114397 /// NM_020865 1569594_a_at 2.17 down 1.09 down SDCCAG1 serologically defined colon cancer antigen 1 NM_004713 238518_x_at 2.13 down 1.09 down GLYCTK glycerate kinase NM_145262 217650_x_at 2.83 down 1.09 down ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 NM_006927 218862_at 2.12 down 1.13 down ASB13 ankyrin repeat and SOCS box-containing 13 NM_024701 215587_x_at 2.83 down 1.13 down CDNA FLJ13829 fis, clone THYRO1000625 215623_x_at 2.33 down 1.13 down SMC4 structural maintenance of chromosomes 4 NM_001002800 /// NM_005496 231479_at 2.00 down 1.14 down TTC33 tetratricopeptide repeat domain 33 NM_012382 222854_s_at 2.05 down 1.14 down GEMIN8 gem (nuclear organelle) associated protein 8 NM_001042479 /// NM_001042480 /// NM_017856 242766_at 2.13 down 1.14 down Homo sapiens, clone IMAGE:3660074, mRNA 228766_at 2.45 down 1.15 down 200598_s_at 2.11 down 1.16 down HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 NM_003299 221755_at 2.10 down 1.17 down EHBP1L1 EH domain binding protein 1-like 1 NM_001099409 1556082_a_at 2.20 down 1.18 down CDNA FLJ33441 fis, clone BRACE2021932 205099_s_at 2.01 down 1.18 down CCR1 chemokine (C-C motif) receptor 1 NM_001295 203731_s_at 2.00 down 1.18 down ZKSCAN5 zinc finger with KRAB and SCAN domains 5 NM_014569 /// NM_145102 233511_at 2.07 down 1.18 down CDNA clone IMAGE:5271538 235985_at 2.89 down 1.18 down Transcribed locus 214987_at 2.41 down 1.19 down CDNA clone IMAGE:4801326 230888_at 2.18 down 1.19 down WDR91 WD repeat domain 91 NM_014149 225272_at 2.04 down 1.20 down SAT2 spermidine/spermine N1-acetyltransferase family member 2 NM_133491 201491_at 2.02 down 1.20 down AHSA1 AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast) NM_012111 205240_at 2.74 down 1.20 down GPSM2 G-protein signaling modulator 2 (AGS3-like, C. elegans) NM_013296 229466_at 2.14 down 1.21 down LOC256273 hypothetical protein LOC256273 227507_at 2.06 down 1.22 down ZNF592 zinc finger protein 592 NM_014630 225377_at 2.21 down 1.22 down C9orf86 chromosome 9 open reading frame 86 NM_017995 /// NM_024718 212601_at 2.47 down 1.22 down ZZEF1 zinc finger, ZZ-type with EF-hand domain 1 NM_015113 228789_at 2.92 down 1.24 down MTMR6 myotubularin related protein 6 NM_004685 205854_at 2.44 down 1.24 down TULP3 tubby like protein 3 NM_003324 214836_x_at 2.04 down 1.26 down IGKC immunoglobulin kappa constant 218895_at 2.82 down 1.26 down GPATCH3 G patch domain containing 3 NM_022078 215521_at 2.16 down 1.27 down PHC3 polyhomeotic homolog 3 (Drosophila) NM_024947 204492_at 2.26 down 1.27 down ARHGAP11A Rho GTPase activating protein 11A NM_014783 /// NM_199357 /// XM_001714495 221436_s_at 2.14 down 1.28 down CDCA3 cell division cycle associated 3 NM_031299 224736_at 2.63 down 1.28 down CCAR1 cell division cycle and apoptosis regulator 1 NM_018237 214965_at 2.17 down 1.29 down SPATA2L spermatogenesis associated 2-like NM_152339 235084_x_at 2.56 down 1.30 down Transcribed locus 244792_at 2.06 down 1.31 down 235696_at 2.33 down 1.31 down CDNA clone IMAGE:4837650 229483_at 2.09 down 1.31 down CDNA FLJ42331 fis, clone TSTOM2000588 64488_at 2.31 down 1.31 down CDNA FLJ38849 fis, clone MESAN2008936 201674_s_at 2.40 down 1.32 down AKAP1 A kinase (PRKA) anchor protein 1 NM_003488 220342_x_at 2.41 down 1.32 down EDEM3 ER degradation enhancer, mannosidase alpha-like 3 NM_025191 233509_at 2.26 down 1.33 down HERC4 hect domain and RLD 4 NM_015601 /// NM_022079 202386_s_at 2.02 down 1.33 down KIAA0430 KIAA0430 NM_014647 220305_at 2.08 down 1.34 down MGC3260 hypothetical LOC78993 228897_at 2.08 down 1.34 down DERL3 Der1-like domain family, member 3 NM_001002862 /// NM_198440 228723_at 2.14 down 1.34 down CDNA FLJ30445 fis, clone BRACE2009238 239294_at 2.31 down 1.35 down Transcribed locus 208993_s_at 3.01 down 1.35 down PPIG peptidylprolyl isomerase G (cyclophilin G) NM_004792 203264_s_at 2.17 down 1.36 down ARHGEF9 Cdc42 guanine nucleotide exchange factor (GEF) 9 NM_015185 217164_at 2.16 down 1.36 down 218756_s_at 2.12 down 1.36 down MGC4172 short-chain dehydrogenase/reductase NM_024308 228252_at 2.09 down 1.36 down PIF1 PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) NM_025049 235782_at 2.52 down 1.36 down Transcribed locus 211969_at 2.13 down 1.37 down HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 NM_001017963 /// NM_005348 215942_s_at 2.01 down 1.37 down GTSE1 G-2 and S-phase expressed 1 NM_016426 227811_at 2.17 down 1.38 down FGD3 FYVE, RhoGEF and PH domain containing 3 NM_001083536 /// NM_033086 210625_s_at 2.35 down 1.38 down AKAP1 A kinase (PRKA) anchor protein 1 NM_003488 210993_s_at 2.24 down 1.38 down SMAD1 SMAD family member 1 NM_001003688 /// NM_005900 224520_s_at 5.02 down 1.39 down BEST3 bestrophin 3 NM_032735 /// NM_152439 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus 233642_s_at 2.06 down 1.39 down HEATR5B HEAT repeat containing 5B NM_019024 222305_at 2.08 down 1.39 down HK2 hexokinase 2 NM_000189 214550_s_at 2.60 down 1.40 down TNPO3 transportin 3 NM_012470 222713_s_at 2.03 down 1.40 down FANCF Fanconi anemia, complementation group F NM_022725 242578_x_at 2.83 down 1.40 down SLC22A3 Solute carrier family 22 (extraneuronal monoamine transporter), member 3 NM_021977 222045_s_at 2.23 down 1.41 down PCIF1 PDX1 C-terminal inhibiting factor 1 NM_022104 243560_at 2.54 down 1.42 down Transcribed locus 219949_at 4.30 down 1.42 down LRRC2 leucine rich repeat containing 2 NM_024512 /// NM_024750 203345_s_at 2.28 down 1.42 down MTF2 metal response element binding transcription factor 2 NM_007358 223174_at 2.14 down 1.42 down BTBD10 BTB (POZ) domain containing 10 NM_032320 217807_s_at 2.01 down 1.42 down GLTSCR2 glioma tumor suppressor candidate region gene 2 NM_015710 232682_at 2.06 down 1.42 down MREG melanoregulin NM_018000 242691_at 2.31 down 1.43 down CDNA FLJ41369 fis, clone BRCAN2006117 226413_at 2.05 down 1.43 down LOC400027 hypothetical gene supported by BC047417 XM_001718517 /// XM_931434 /// XM_943193 203725_at 2.08 down 1.43 down GADD45A growth arrest and DNA-damage-inducible, alpha NM_001924 225108_at 2.47 down 1.44 down 229050_s_at 2.11 down 1.44 down SNHG7 small nucleolar RNA host gene (non-protein coding) 7 NR_003672 228167_at 2.01 down 1.44 down KLHL6 kelch-like 6 (Drosophila) NM_130446 1552621_at 2.45 down 1.44 down POLR2J2 DNA directed RNA polymerase II polypeptide J-related NM_032959 239024_at 2.03 down 1.45 down ZNF148 zinc finger protein 148 NM_021964 1558755_x_at 2.66 down 1.45 down ZNF763 zinc finger protein 763 NM_001012753 225330_at 2.20 down 1.45 down IGF1R insulin-like growth factor 1 receptor NM_000875 223487_x_at 2.04 down 1.45 down GNB4 guanine nucleotide binding protein (G protein), beta polypeptide 4 NM_021629 1552427_at 2.35 down 1.46 down ZNF485 zinc finger protein 485 NM_145312 33646_g_at 2.24 down 1.46 down GM2A GM2 ganglioside activator NM_000405 201737_s_at 2.92 down 1.46 down 7-Mar membrane-associated ring finger (C3HC4) 6 NM_005885 212086_x_at 2.03 down 1.47 down LMNA lamin A/C NM_005572 /// NM_170707 /// NM_170708 minichromosome maintenance complex component 3 associated protein 220459_at 2.13 down 1.47 down MCM3APAS antisense NR_002776 230178_s_at 2.02 down 1.47 down CDNA FLJ38461 fis, clone FEBRA2020977 209162_s_at 2.03 down 1.47 down PRPF4 PRP4 pre-mRNA processing factor 4 homolog (yeast) NM_004697 238908_at 2.94 down 1.48 down CALU Calumenin NM_001219 205132_at 2.29 down 1.48 down ACTC1 actin, alpha, cardiac muscle 1 NM_005159 217142_at 2.30 down 1.49 down NM_001042749 /// NM_001042750 /// NM_001042751 /// 207983_s_at 2.21 down 1.49 down STAG2 stromal antigen 2 NM_006603 225640_at 2.15 down 1.49 down LOC401504 hypothetical gene supported by AK091718 241773_at 2.14 down 1.49 down 1553286_at 2.17 down 1.50 down ZNF555 zinc finger protein 555 NM_152791 216606_x_at 2.14 down 1.50 down LYPLA2P1 lysophospholipase II pseudogene 1 NR_001444