Variation of Storage Polysaccharides in Phototrophic Microorganisms
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Chlorophyta, Trebouxiophyceae) in Lake Tanganyika (Africa)*
Biologia 63/6: 799—805, 2008 Section Botany DOI: 10.2478/s11756-008-0101-4 Siderocelis irregularis (Chlorophyta, Trebouxiophyceae) in Lake Tanganyika (Africa)* Maya P. Stoyneva1, Elisabeth Ingolič2,WernerKofler3 &WimVyverman4 1Sofia University ‘St Kliment Ohridski’, Faculty of Biology, Department of Botany, 8 bld. Dragan Zankov, BG-1164 Sofia, Bulgaria; e-mail: [email protected], [email protected]fia.bg 2Graz University of Technology, Research Institute for Electron Microscopy, Steyrergasse 17,A-8010 Graz, Austria; e-mail: [email protected] 3University of Innsbruck, Institute of Botany, Sternwartestrasse 15,A-6020 Innsbruck, Austria; e-mail: werner.kofl[email protected] 4Ghent University, Department Biology, Laboratory of Protistology and Aquatic Ecology, Krijgslaan 281-S8,B-9000 Gent, Belgium; e-mail: [email protected] Abstract: Siderocelis irregularis Hindák, representing a genus Siderocelis (Naumann) Fott that is known from European temperate waters, was identified as a common phytoplankter in Lake Tanganyika. It was found aposymbiotic as well as ingested (possibly endosymbiotic) in lake heterotrophs, mainly Strombidium sp. and Vorticella spp. The morphology and ultrastructure of the species, studied with LM, SEM and TEM, are described with emphasis on the structure of the cell wall and the pyrenoid. Key words: Chlorophyta; cell wall; pyrenoid; symbiosis; ciliates; Strombidium; Vorticella Introduction ics of symbiotic species in general came into alignment with that of free-living algae and the term ‘zoochlorel- Tight partnerships between algae and aquatic inver- lae’ was abandoned as being taxonomically ambiguous tebrates, including symbiotic relationships, have long (e.g. Bal 1968; Reisser & Wiessner 1984; Taylor 1984; been of interest and a number of excellent reviews are Reisser 1992a). -
METABOLIC EVOLUTION in GALDIERIA SULPHURARIA By
METABOLIC EVOLUTION IN GALDIERIA SULPHURARIA By CHAD M. TERNES Bachelor of Science in Botany Oklahoma State University Stillwater, Oklahoma 2009 Submitted to the Faculty of the Graduate College of the Oklahoma State University in partial fulfillment of the requirements for the Degree of DOCTOR OF PHILOSOPHY May, 2015 METABOLIC EVOLUTION IN GALDIERIA SUPHURARIA Dissertation Approved: Dr. Gerald Schoenknecht Dissertation Adviser Dr. David Meinke Dr. Andrew Doust Dr. Patricia Canaan ii Name: CHAD M. TERNES Date of Degree: MAY, 2015 Title of Study: METABOLIC EVOLUTION IN GALDIERIA SULPHURARIA Major Field: PLANT SCIENCE Abstract: The thermoacidophilic, unicellular, red alga Galdieria sulphuraria possesses characteristics, including salt and heavy metal tolerance, unsurpassed by any other alga. Like most plastid bearing eukaryotes, G. sulphuraria can grow photoautotrophically. Additionally, it can also grow solely as a heterotroph, which results in the cessation of photosynthetic pigment biosynthesis. The ability to grow heterotrophically is likely correlated with G. sulphuraria ’s broad capacity for carbon metabolism, which rivals that of fungi. Annotation of the metabolic pathways encoded by the genome of G. sulphuraria revealed several pathways that are uncharacteristic for plants and algae, even red algae. Phylogenetic analyses of the enzymes underlying the metabolic pathways suggest multiple instances of horizontal gene transfer, in addition to endosymbiotic gene transfer and conservation through ancestry. Although some metabolic pathways as a whole appear to be retained through ancestry, genes encoding individual enzymes within a pathway were substituted by genes that were acquired horizontally from other domains of life. Thus, metabolic pathways in G. sulphuraria appear to be composed of a ‘metabolic patchwork’, underscored by a mosaic of genes resulting from multiple evolutionary processes. -
Toxicity, Physiological, and Ultrastructural Effects of Arsenic
International Journal of Environmental Research and Public Health Article Toxicity, Physiological, and Ultrastructural Effects of Arsenic and Cadmium on the Extremophilic Microalga Chlamydomonas acidophila Silvia Díaz 1, Patricia De Francisco 1,2, Sanna Olsson 3 , Ángeles Aguilera 2,*, Elena González-Toril 2 and Ana Martín-González 1 1 Department of Genetics, Physiology and Microbiology, Faculty of Biology, Universidad Complutense de Madrid (UCM), C/José Antonio Novais, 12, 28040 Madrid, Spain; [email protected] (S.D.); [email protected] (P.d.F.); [email protected] (A.M.-G.) 2 Astrobiology Center (INTA-CSIC), Carretera de Ajalvir km 4, Torrejón de Ardoz, 28850 Madrid, Spain; [email protected] 3 Department of Forest Ecology and Genetics, INIA Forest Research Center (INIA-CIFOR), Carretera de A Coruña km 7.5, 28040 Madrid, Spain; sanna.olsson@helsinki.fi * Correspondence: [email protected]; Tel.: +34-91-520-6434 Received: 17 December 2019; Accepted: 24 February 2020; Published: 3 March 2020 Abstract: The cytotoxicity of cadmium (Cd), arsenate (As(V)), and arsenite (As(III)) on a strain of Chlamydomonas acidophila, isolated from the Rio Tinto, an acidic environment containing high metal(l)oid concentrations, was analyzed. We used a broad array of methods to produce complementary information: cell viability and reactive oxygen species (ROS) generation measures, ultrastructural observations, transmission electron microscopy energy dispersive x-ray microanalysis (TEM–XEDS), and gene expression. This acidophilic microorganism was affected differently by the tested metal/metalloid: It showed high resistance to arsenic while Cd was the most toxic heavy metal, showing an LC50 = 1.94 µM. -
Closing the Circle in Chlamydomonas the Different Stages of the Calvin-Benson Cycle Take Place in Separate Locations Within the Chloroplast
INSIGHT CARBON FIXATION Closing the circle In Chlamydomonas the different stages of the Calvin-Benson cycle take place in separate locations within the chloroplast. MARYLOU C MACHINGURA AND JAMES V MORONEY terrestrial plants and both groups have Rubisco Related research article Ku¨ ken A, Sommer enzymes with similar properties. However, land F, Yaneva-Roder L, Mackinder LCM, Ho¨ hne plants rarely have pyrenoids because CO2 dif- M, Geimer S, Jonikas MC, Schroda M, Stitt fuses 10,000 times more rapidly in air than in M, Nikoloski Z, Mettler-Altmann T. 2018. water. Once an aquatic organism has fixed CO2, Effects of microcompartmentation on flux it takes a long time for the next molecule to distribution and metabolic pools in Chlamy- arrive, hence the need for a carbon concentra- domonas reinhardtii chloroplasts. eLife 7: tion mechanism that kicks in when the levels of e37960. DOI: 10.7554/eLife.37960 CO2 get too low. The carbon concentration mechanism in Chla- - mydomonas takes bicarbonate (HCO3 ) from outside the cells and converts it into CO2 that can be used by Rubisco inside the pyrenoid. hen the unicellular green alga Chla- There, Rubisco catalyzes the addition of CO2 mydomonas reinhardtii is viewed onto a molecule known as RuBP to create two W under a microscope, the most promi- molecules of a compound called 3PGA; this is nent object in the cell is a structure called the the first step in the Calvin-Benson cycle, a chain pyrenoid. Located within the chloroplast, the of reactions which results in the creation of organelle where photosynthesis takes place, the organic molecules that the cell needs. -
Effects of Microcompartmentation on Flux Distribution and Metabolic Pools
RESEARCH ARTICLE Effects of microcompartmentation on flux distribution and metabolic pools in Chlamydomonas reinhardtii chloroplasts Anika Ku¨ ken1,2, Frederik Sommer1†, Liliya Yaneva-Roder1, Luke CM Mackinder3‡, Melanie Ho¨ hne1, Stefan Geimer4, Martin C Jonikas3§, Michael Schroda1†, Mark Stitt1, Zoran Nikoloski1,2, Tabea Mettler-Altmann1,5,6* 1Max Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany; 2Bioinformatics Group, Institute of Biochemistry and Biology, University of Potsdam, Potsdam, Germany; 3Department of Plant Biology, Carnegie Institution for Science, Stanford, United States; 4Institute of Cell Biology, University of Bayreuth, Bayreuth, Germany; 5Cluster of Excellence on Plant Sciences, Heinrich-Heine University, Du¨ sseldorf, Germany; 6Institute of Plant Biochemistry, Heinrich-Heine University, Du¨ sseldorf, Germany Abstract Cells and organelles are not homogeneous but include microcompartments that alter *For correspondence: [email protected] the spatiotemporal characteristics of cellular processes. The effects of microcompartmentation on metabolic pathways are however difficult to study experimentally. The pyrenoid is a † Present address: Molecular microcompartment that is essential for a carbon concentrating mechanism (CCM) that improves the Biotechnology and Systems photosynthetic performance of eukaryotic algae. Using Chlamydomonas reinhardtii, we obtained Biology, University of experimental data on photosynthesis, metabolites, and proteins in CCM-induced and CCM- Kaiserslautern, Kaiserslautern, -
Cryptophyte Farming by Symbiotic Ciliate Host Detected in Situ
Cryptophyte farming by symbiotic ciliate host detected in situ Dajun Qiua, Liangmin Huanga, and Senjie Linb,1 aChinese Academy of Sciences Key Laboratory of Tropical Marine Bio-Resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou 510301, China; and bDepartment of Marine Sciences, University of Connecticut, Groton, CT 06340 Edited by David M. Karl, University of Hawaii, Honolulu, HI, and approved September 8, 2016 (received for review July 28, 2016) Protist–alga symbiosis is widespread in the ocean, but its character- as the causative species of the bloom, with no detectable crypto- istics and function in situ remain largely unexplored. Here we report phytes and hardly any other organisms present in the bloom water − the symbiosis of the ciliate Mesodinium rubrum with cryptophyte (Fig. 1B). At 1.03 × 106 cells L 1, M. rubrum abundance in the bloom cells during a red-tide bloom in Long Island Sound. In contrast to was over 100-fold higher than the annual peak in Long Island Sound the current notion that Mesodinium retains cryptophyte chloroplasts (15). Each Mesodinium cell harbored 20 to 30 cryptophyte cells (n = or organelles, our multiapproach analyses reveal that in this bloom 16), which packed the peripheral region of the M. rubrum cells (Fig. the endosymbiotic Teleaulax amphioxeia cells were intact and 1E), with complete cell structures, including cell membranes, nuclei, expressing genes of membrane transporters, nucleus-to-cytoplasm and chloroplasts (Fig. 1C). Taking advantage of the large cell size of RNA transporters, and all major metabolic pathways. Among the Mesodinium spp. (width, 20 to 23 μm; length, 25 to 26 μm), we most highly expressed were ammonium transporters in both organ- picked M. -
Ball Et Al. (2011)
Journal of Experimental Botany, Vol. 62, No. 6, pp. 1775–1801, 2011 doi:10.1093/jxb/erq411 Advance Access publication 10 January, 2011 DARWIN REVIEW The evolution of glycogen and starch metabolism in eukaryotes gives molecular clues to understand the establishment of plastid endosymbiosis Steven Ball*, Christophe Colleoni, Ugo Cenci, Jenifer Nirmal Raj and Catherine Tirtiaux Unite´ de Glycobiologie Structurale et Fonctionnelle, UMR 8576 CNRS-USTL, Baˆ timent C9, Cite´ Scientifique, F-59655 Villeneuve d’Ascq, France * To whom correspondence should be addressed: E-mail: [email protected] Received 10 September 2010; Revised 18 November 2010; Accepted 23 November 2010 Downloaded from Abstract Solid semi-crystalline starch and hydrosoluble glycogen define two distinct physical states of the same type of storage polysaccharide. Appearance of semi-crystalline storage polysaccharides appears linked to the http://jxb.oxfordjournals.org/ requirement of unicellular diazotrophic cyanobacteria to fuel nitrogenase and protect it from oxygen through respiration of vast amounts of stored carbon. Starch metabolism itself resulted from the merging of the bacterial and eukaryote pathways of storage polysaccharide metabolism after endosymbiosis of the plastid. This generated the three Archaeplastida lineages: the green algae and land plants (Chloroplastida), the red algae (Rhodophyceae), and the glaucophytes (Glaucophyta). Reconstruction of starch metabolism in the common ancestor of Archaeplastida suggests that polysaccharide synthesis was ancestrally cytosolic. In addition, the synthesis of cytosolic starch from the ADP-glucose exported from the cyanobacterial symbiont possibly defined the original by guest on March 30, 2012 metabolic flux by which the cyanobiont provided photosynthate to its host. Additional evidence supporting this scenario include the monophyletic origin of the major carbon translocators of the inner membrane of eukaryote plastids which are sisters to nucleotide-sugar transporters of the eukaryote endomembrane system. -
A Taxonomic Reassessment of Chlamydomonas Meslinii (Volvocales, Chlorophyceae) with a Description of Paludistella Gen.Nov
Phytotaxa 432 (1): 065–080 ISSN 1179-3155 (print edition) https://www.mapress.com/j/pt/ PHYTOTAXA Copyright © 2020 Magnolia Press Article ISSN 1179-3163 (online edition) https://doi.org/10.11646/phytotaxa.432.1.6 A taxonomic reassessment of Chlamydomonas meslinii (Volvocales, Chlorophyceae) with a description of Paludistella gen.nov. HANI SUSANTI1,6, MASAKI YOSHIDA2, TAKESHI NAKAYAMA2, TAKASHI NAKADA3,4 & MAKOTO M. WATANABE5 1Life Science Innovation, School of Integrative and Global Major, University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki, 305-8577, Japan. 2Faculty of Life and Environmental Sciences, University of Tsukuba, 1-1-1 Tennodai, Tsukuba 305-8577, Japan. 3Institute for Advanced Biosciences, Keio University, Tsuruoka, Yamagata, 997-0052, Japan. 4Systems Biology Program, Graduate School of Media and Governance, Keio University, Fujisawa, Kanagawa, 252-8520, Japan. 5Algae Biomass Energy System Development and Research Center, University of Tsukuba. 6Research Center for Biotechnology, Indonesian Institute of Sciences, Jl. Raya Bogor KM 46 Cibinong West Java, Indonesia. Corresponding author: [email protected] Abstract Chlamydomonas (Volvocales, Chlorophyceae) is a large polyphyletic genus that includes numerous species that should be classified into independent genera. The present study aimed to examine the authentic strain of Chlamydomonas meslinii and related strains based on morphological and molecular data. All the strains possessed an asteroid chloroplast with a central pyrenoid and hemispherical papilla; however, they were different based on cell and stigmata shapes. Molecular phylogenetic analyses based on 18S rDNA, atpB, and psaB indicated that the strains represented a distinct subclade in the clade Chloromonadinia. The secondary structure of ITS-2 supported the separation of the strains into four species. -
Genetic Dissection of Floridean Starch Synthesis in the Cytosol of the Model Dinoflagellate Crypthecodinium Cohnii
Genetic dissection of floridean starch synthesis in the cytosol of the model dinoflagellate Crypthecodinium cohnii. David Dauvillée, Philippe Deschamps, Jean-Philippe Ral, Charlotte Plancke, Jean-Luc Putaux, Jimi Devassine, Amandine Durand-Terrasson, Aline Devin, Steven Ball To cite this version: David Dauvillée, Philippe Deschamps, Jean-Philippe Ral, Charlotte Plancke, Jean-Luc Putaux, et al.. Genetic dissection of floridean starch synthesis in the cytosol of the model dinoflagellate Cryptheco- dinium cohnii.. Proceedings of the National Academy of Sciences of the United States of America , National Academy of Sciences, 2009, 106 (50), pp.21126-21130. 10.1073/pnas.0907424106. hal- 00436589 HAL Id: hal-00436589 https://hal.archives-ouvertes.fr/hal-00436589 Submitted on 27 Nov 2009 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Biological sciences ‐ Biochemistry Genetic dissection of floridean starch synthesis in the cytosol of the model dinoflagellate Crypthecodinium cohnii David Dauvillée†, Philippe Deschamps†, Jean‐Philippe Ral*, Charlotte Plancke†, -
"Plastid Originand Evolution". In: Encyclopedia of Life
CORE Metadata, citation and similar papers at core.ac.uk Provided by University of Queensland eSpace Plastid Origin and Advanced article Evolution Article Contents . Introduction Cheong Xin Chan, Rutgers University, New Brunswick, New Jersey, USA . Primary Plastids and Endosymbiosis . Secondary (and Tertiary) Plastids Debashish Bhattacharya, Rutgers University, New Brunswick, New Jersey, USA . Nonphotosynthetic Plastids . Plastid Theft . Plastid Origin and Eukaryote Evolution . Concluding Remarks Online posting date: 15th November 2011 Plastids (or chloroplasts in plants) are organelles within organisms that emerged ca. 2.8 billion years ago (Olson, which photosynthesis takes place in eukaryotes. The ori- 2006), followed by the evolution of eukaryotic algae ca. 1.5 gin of the widespread plastid traces back to a cyano- billion years ago (Yoon et al., 2004) and finally by the rise of bacterium that was engulfed and retained by a plants ca. 500 million years ago (Taylor, 1988). Photosynthetic reactions occur within the cytosol in heterotrophic protist through a process termed primary prokaryotes. In eukaryotes, however, the reaction takes endosymbiosis. Subsequent (serial) events of endo- place in the organelle, plastid (e.g. chloroplast in plants). symbiosis, involving red and green algae and potentially The plastid also houses many other reactions that are other eukaryotes, yielded the so-called ‘complex’ plastids essential for growth and development in algae and plants; found in photosynthetic taxa such as diatoms, dino- for example, the -
Common Evolutionary Origin of Starch Biosynthetic Enzymes in Green and Red Algae1
J. Phycol. 41, 1131–1141 (2005) r 2005 Phycological Society of America DOI: 10.1111/j.1529-8817.2005.00135.x COMMON EVOLUTIONARY ORIGIN OF STARCH BIOSYNTHETIC ENZYMES IN GREEN AND RED ALGAE1 Nicola J. Patron and Patrick J. Keeling2 Canadian Institute for Advanced Research, Botany Department, University of British Columbia, 3529-6270 University Boulevard, Vancouver, BC, V6T 1Z4, Canada Plastidic starch synthesis in green algae and length and number of branches varying between or- plants occurs via ADP-glucose in likeness to pro- ganisms. The a-1,4-glucan chains are synthesized by karyotes from which plastids have evolved. In con- glycosyltransferases, which use uridine diphosphate trast, floridean starch synthesis in red algae (UDP)-glucose or ADP-glucose as the sugar donor proceeds via uridine diphosphate-glucose in sem- and a preexisting a-1,4-glucan chain as the acceptor. blance to eukaryotic glycogen synthesis and occurs Glycogen is localized in the cytoplasm of bacteria, fun- in the cytosol rather than the plastid. Given the gi, and animal cells. Both eukaryotic and prokaryotic monophyletic origin of all plastids, we investigated glycogens are always amorphous and never form the the origin of the enzymes of the plastid and cyto- crystalline granules characteristic of starch. Red algal solic starch synthetic pathways to determine wheth- starch, thought to be comprised purely of amylopectin er their location reflects their origin—either from chains (Marszalec et al. 2001, Yu et al. 2002), is cyto- the cyanobacterial endosymbiont or from the solic and is known as floridean starch, whereas in eukaryotic host. We report that, despite the com- green algae and plants, starch accumulates within the partmentalization of starch synthesis differing in plastid. -
758 the Ultrastructure of an Alloparasitic Red Alga Choreocolax
PHYCOLOGIA 12(3/4) 1973 The ultrastructure of an alloparasitic red alga Choreocolax polysiphoniae I PAUL KUGRENS Department of Botany and Plant Pathology, Colorado State University, Fort Collins, Colorado 80521, U.S.A. AND JOHN A. WEST Department of Botany, University of California, Berkeley, California 94720, U.S.A. Accepted June 18, 1973 An alloparasite, Choreocolax polysipiloniae, apparently represents one of the most evolved parasitic red algae. Chlo�oplasts are highly redu�ed and consist of dOl!ble membrane limited organelles lacking any inter nal thylako!� developmen!. The unInucleate cells have thick walls, an absence of starch in cortical cells and larg� quantIties of starch In meduII ary cells. Host-para�ite connections are made by typical red algal pit con . nectIOns. G.eneral effects of t�e InfectIOn on the host .Include cell hypertrophy, decrease in floridean starch granules, dispersed cytoplasmiC matrIces, and contorsJOn of chloroplasts. Phycologia, 12(3/4): 175-186, 1973 Introduction of the host, Cryptopleura. Her decision was The paraSItIc red algae constitute a unique based on the similarity in reproductive struc 1?irou of organisms about which surprisingly tures between the host and parasite, and she � suggested bacteria as causal agents for such lIttle IS known, although their distinctive nature . has been recognized since the late nineteenth proliferatIons. Chemin (1937) also indicated century. There are approximately 40 genera, that bacteria might be causal agents since bac unknown numbers of species, and all are ex teria were isolated from surface-sterilized thalli clusively florideophycean, belonging to all of Callocolax neglectus. Observations on Lobo orders except the Nemaliales.