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Endangered Species
FEATURE: ENDANGERED SPECIES Conservation Status of Imperiled North American Freshwater and Diadromous Fishes ABSTRACT: This is the third compilation of imperiled (i.e., endangered, threatened, vulnerable) plus extinct freshwater and diadromous fishes of North America prepared by the American Fisheries Society’s Endangered Species Committee. Since the last revision in 1989, imperilment of inland fishes has increased substantially. This list includes 700 extant taxa representing 133 genera and 36 families, a 92% increase over the 364 listed in 1989. The increase reflects the addition of distinct populations, previously non-imperiled fishes, and recently described or discovered taxa. Approximately 39% of described fish species of the continent are imperiled. There are 230 vulnerable, 190 threatened, and 280 endangered extant taxa, and 61 taxa presumed extinct or extirpated from nature. Of those that were imperiled in 1989, most (89%) are the same or worse in conservation status; only 6% have improved in status, and 5% were delisted for various reasons. Habitat degradation and nonindigenous species are the main threats to at-risk fishes, many of which are restricted to small ranges. Documenting the diversity and status of rare fishes is a critical step in identifying and implementing appropriate actions necessary for their protection and management. Howard L. Jelks, Frank McCormick, Stephen J. Walsh, Joseph S. Nelson, Noel M. Burkhead, Steven P. Platania, Salvador Contreras-Balderas, Brady A. Porter, Edmundo Díaz-Pardo, Claude B. Renaud, Dean A. Hendrickson, Juan Jacobo Schmitter-Soto, John Lyons, Eric B. Taylor, and Nicholas E. Mandrak, Melvin L. Warren, Jr. Jelks, Walsh, and Burkhead are research McCormick is a biologist with the biologists with the U.S. -
Drought and the Delta – a “Deep Dive” Into Impacts
DroughtDrought andand thethe DeltaDelta – A “Deep Dive” into Impacts – Sponsored by Drought and the Delta – A “Deep Dive” into Impacts CONTENTS Introduction: The Sacramento-San Joaquin Delta and Drought ................................3 Resource Management .....................................................................................................................................9 Case Study: Contra Costa Water District Operations ..........................................................12 Ecosystem Effects ................................................................................................................................................14 Cast Study: The Importance of Floodplains ................................................................................20 Water Quality ..........................................................................................................................................................21 Agriculture ................................................................................................................................................................26 Case Study: McCormack Sheep and Grain ....................................................................................29 Policy ..............................................................................................................................................................................31 “Drought and the Delta” Presenters: • “Drought and the Delta” Jay Lund, Director, Center for Watershed Sciences, -
Molecular Systematics of Western North American Cyprinids (Cypriniformes: Cyprinidae)
Zootaxa 3586: 281–303 (2012) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ ZOOTAXA Copyright © 2012 · Magnolia Press Article ISSN 1175-5334 (online edition) urn:lsid:zoobank.org:pub:0EFA9728-D4BB-467E-A0E0-0DA89E7E30AD Molecular systematics of western North American cyprinids (Cypriniformes: Cyprinidae) SUSANA SCHÖNHUTH 1, DENNIS K. SHIOZAWA 2, THOMAS E. DOWLING 3 & RICHARD L. MAYDEN 1 1 Department of Biology, Saint Louis University, 3507 Laclede Avenue, St. Louis, MO 63103, USA. E-mail S.S: [email protected] ; E-mail RLM: [email protected] 2 Department of Biology and Curator of Fishes, Monte L. Bean Life Science Museum, Brigham Young University, Provo, UT 84602, USA. E-mail: [email protected] 3 School of Life Sciences, Arizona State University, Tempe, AZ 85287-4501, USA. E-mail: [email protected] Abstract The phylogenetic or evolutionary relationships of species of Cypriniformes, as well as their classification, is in a era of flux. For the first time ever, the Order, and constituent Families are being examined for relationships within a phylogenetic context. Relevant findings as to sister-group relationships are largely being inferred from analyses of both mitochondrial and nuclear DNA sequences. Like the vast majority of Cypriniformes, due to an overall lack of any phylogenetic investigation of these fishes since Hennig’s transformation of the discipline, changes in hypotheses of relationships and a natural classification of the species should not be of surprise to anyone. Basically, for most taxa no properly supported phylogenetic hypothesis has ever been done; and this includes relationships with reasonable taxon and character sampling of even families and subfamilies. -
LATE MIOCENE FISHES of the CACHE VALLEY MEMBER, SALT LAKE FORMATION, UTAH and IDAHO By
LATE MIOCENE FISHES OF THE CACHE VALLEY MEMBER, SALT LAKE FORMATION, UTAH AND IDAHO by PATRICK H. MCCLELLAN AND GERALD R. SMITH MISCELLANEOUS PUBLICATIONS MUSEUM OF ZOOLOGY, UNIVERSITY OF MICHIGAN, 208 Ann Arbor, December 17, 2020 ISSN 0076-8405 P U B L I C A T I O N S O F T H E MUSEUM OF ZOOLOGY, UNIVERSITY OF MICHIGAN NO. 208 GERALD SMITH, Editor The publications of the Museum of Zoology, The University of Michigan, consist primarily of two series—the Miscellaneous Publications and the Occasional Papers. Both series were founded by Dr. Bryant Walker, Mr. Bradshaw H. Swales, and Dr. W. W. Newcomb. Occasionally the Museum publishes contributions outside of these series. Beginning in 1990 these are titled Special Publications and Circulars and each is sequentially numbered. All submitted manuscripts to any of the Museum’s publications receive external peer review. The Occasional Papers, begun in 1913, serve as a medium for original studies based principally upon the collections in the Museum. They are issued separately. When a sufficient number of pages has been printed to make a volume, a title page, table of contents, and an index are supplied to libraries and individuals on the mailing list for the series. The Miscellaneous Publications, initiated in 1916, include monographic studies, papers on field and museum techniques, and other contributions not within the scope of the Occasional Papers, and are published separately. Each number has a title page and, when necessary, a table of contents. A complete list of publications on Mammals, Birds, Reptiles and Amphibians, Fishes, I nsects, Mollusks, and other topics is available. -
State of California the Natural Resources Agency DEPARTMENT of FISH and GAME Biogeographic Data Branch California Natural Diversity Database
State of California The Natural Resources Agency DEPARTMENT OF FISH AND GAME Biogeographic Data Branch California Natural Diversity Database STATE & FEDERALLY LISTED ENDANGERED & THREATENED ANIMALS OF CALIFORNIA January 2010 This is a list of animals found within California or off the coast of the State that have been classified as Endangered or Threatened by the California Fish & Game Commission (state list) or by the U.S. Secretary of the Interior or the U.S. Secretary of Commerce (federal list). The official California listing of Endangered and Threatened animals is contained in the California Code of Regulations, Title 14, Section 670.5. The official federal listing of Endangered and Threatened animals is published in the Federal Register, 50 CFR 17.11. The California Endangered Species Act of 1970 created the categories of “Endangered” and “Rare”. The California Endangered Species Act of 1984 created the categories of “Endangered” and “Threatened”. On January 1, 1985, all animal species designated as “Rare” were reclassified as “Threatened”. Animals that are candidates for state listing and animals proposed for federal listing are also included on this list. A state candidate species is one that the Fish and Game commission had formally noticed as being under review by the Department for addition to the State list. A federal proposed species is one for which a proposed regulation has been published in the Federal Register. Code Designation: Totals as of January 2010 SE = State-listed as Endangered 45 ST = State listed as Threatened 34 SR = State listed as Rare – old designation, all animals reclassified to Threatened on 1/1/85 0 FE = Federally listed as Endangered (21.5% of all U.S. -
From the Sierra to the Sea the Ecological History of the San Francisco Bay-Delta Watershed
From the Sierra to the Sea The Ecological History of the San Francisco Bay-Delta Watershed © 1998 The Bay Institute of San Francisco Second printing, July 2003 The Bay Institute of San Francisco is a non-profit research and advocacy organization which works to protect and restore the ecosystem of the San Francisco Bay/Delta estuary and its watershed. Since 1981, the Institute’s policy and technical staff have led programs to protect water quality and endangered species, reform state and federal water management, and promote comprehensive ecological restoration in the Bay/Delta. Copies of this report can be ordered for $40.00 (includes shipping and handling) from: The Bay Institute of San Francisco 500 Palm Drive Novato, CA 94949 Phone: (415) 506-0150 Fax: (415) 506-0155 www.bay.org The cover is taken from an engraving showing the entrance to the middle fork of the Sacramento River near modern-day Steamboat Slough, in C. Ringgold’s 1852 series of navigational charts and sailing directions for San Francisco Bay and Delta. Printed on recycled paper From the Sierra to the Sea The Ecological History of the San Francisco Bay-Delta Watershed July 1998 The Bay Institute FROM THE SIERRA TO THE SEA: THE ECOLOGICAL HISTORY OF THE SAN FRANCISCO BAY-DELTA WATERSHED Table of Contents Page CONTRIBUTORS AND ACKNOWLEDGEMENTS................................................................. vii EXECUTIVE SUMMARY....................................................................................................... ES-1 CHAPTER ONE: INTRODUCTION I. Background....................................................................................................... -
A New Chub (Actinopterygii, Cypriniformes, Cyprinidae) from the Middle Miocene (Early Clarendonian) Aldrich Station Formation, Lyon County, Nevada
Paludicola 7(4):137-157 May 2010 © by the Rochester Institute of Vertebrate Paleontology A NEW CHUB (ACTINOPTERYGII, CYPRINIFORMES, CYPRINIDAE) FROM THE MIDDLE MIOCENE (EARLY CLARENDONIAN) ALDRICH STATION FORMATION, LYON COUNTY, NEVADA Thomas S. Kelly Research Associate, Vertebrate Paleontology Section, Natural History Museum of Los Angeles County 900 Exposition Boulevard, Los Angeles, California 90007 ABSTRACT A new chub, Lavinia lugaskii, is described from the middle Miocene (early Clarendonian) Aldrich Station Formation of Lyon County, Nevada. Lavinia lugaskii represents a basal member of the Lavinia-Hesperoleucus lineage, indicating that this lineage diverged from a common ancestor with Mylopharodon before 12.5 – 12.0 million years before present. This is the oldest recognized species of Lavinia and the first new chub species to be documented from the Miocene of Nevada in over 30 years. INTRODUCTION METHODS A sample of fish fossils is now known from Measurements of the skeletons and individual localities that occur in an outlier of the Aldrich Station bones were made to the nearest 0.1 mm with a vernier Formation, exposed just west of Mickey Canyon on the caliper. Measurements of the pharyngeal teeth were northwest flank of the Pine Groove Hills, Lyon made with an optical micrometer to the nearest 0.01 County, Nevada. All of the fish remains were mm. Estimated standard lengths for partial skeletons recovered from a single stratigraphic level represented were extrapolated using the mean ratios of the standard by a thin (~0.06 m) shale bed. This level can be traced length to landmark measurements (e.g., ratios of the SL laterally for about 0.5 km and yielded fossil fish to head length, pectoral fin origin to pelvic fin origin remains at several points along its exposure. -
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AN ICTHYOARCHAEOLOGICAL STUDY OF DIETARY CHANGE IN THE CALIFORNIA DELTA, CONTRA COSTA COUNTY JASON I. MISZANIEC, JELMER W. EERKENS UNIVERSITY OF CALIFORNIA, DAVIS ERIC J. BARTELINK CALIFORNIA STATE UNIVERSITY, CHICO This paper presents the results from a diachronic study of fish remains from two neighboring archaeological mound sites in Contra Costa county, Hotchkiss Mound (CA-CCO-138; 850–450 cal BP) and Simone Mound (CA-CCO-139; 1200–950 cal BP). A previous study (Eerkens and Bartelink, in review) using stable isotope data from individual burials suggested dietary differences between these two sites. This study examines fish remains as a potential source of these dietary differences. Fish remains from shovel probes were identified and quantified. Results indicate that both assemblages are dominated by Sacramento perch (30% and 36%, respectively) and minnows (chub, hitch, pikeminnow; 65% and 57% respectively). Similarities in the ichthyofaunal assemblages suggest that the fish species consumed remained relatively consistent between the Middle and Late Periods, indicating that variation in human bone collagen stable isotope values was not likely driven by differences in the species of fish consumed. The Sacramento-San Joaquin Delta (or the California Delta) is an expansive inland river delta and estuary system. Although this region has rich biodiversity in mammals and birds, the Delta is especially known for its diverse and unique ichthyofaunal communities, which are composed of freshwater, anadromous, and euryhaline species. Although certain species are present year-round, others are seasonally available, during migration and/or spawning events. Prehistoric hunter gatherers, who occupied the Delta for millennia, took full advantage of the ichthyofaunal resources available to them, as is evident from rich fish collections from midden deposits and settlement locations. -
Cypriniformes: Cyprinidae)
Zootaxa 3586: 281–303 (2012) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ ZOOTAXA Copyright © 2012 · Magnolia Press Article ISSN 1175-5334 (online edition) urn:lsid:zoobank.org:pub:0EFA9728-D4BB-467E-A0E0-0DA89E7E30AD Molecular systematics of western North American cyprinids (Cypriniformes: Cyprinidae) SUSANA SCHÖNHUTH 1, DENNIS K. SHIOZAWA 2, THOMAS E. DOWLING 3 & RICHARD L. MAYDEN 1 1 Department of Biology, Saint Louis University, 3507 Laclede Avenue, St. Louis, MO 63103, USA. E-mail S.S: [email protected] ; E-mail RLM: [email protected] 2 Department of Biology and Curator of Fishes, Monte L. Bean Life Science Museum, Brigham Young University, Provo, UT 84602, USA. E-mail: [email protected] 3 School of Life Sciences, Arizona State University, Tempe, AZ 85287-4501, USA. E-mail: [email protected] Abstract The phylogenetic or evolutionary relationships of species of Cypriniformes, as well as their classification, is in a era of flux. For the first time ever, the Order, and constituent Families are being examined for relationships within a phylogenetic context. Relevant findings as to sister-group relationships are largely being inferred from analyses of both mitochondrial and nuclear DNA sequences. Like the vast majority of Cypriniformes, due to an overall lack of any phylogenetic investigation of these fishes since Hennig’s transformation of the discipline, changes in hypotheses of relationships and a natural classification of the species should not be of surprise to anyone. Basically, for most taxa no properly supported phylogenetic hypothesis has ever been done; and this includes relationships with reasonable taxon and character sampling of even families and subfamilies. -
Summary of Data and Analyses Indicating That Exotic Species Have Impaired the Beneficial Uses of Certain California Waters
Summary of data and analyses indicating that exotic species have impaired the beneficial uses of certain California waters A report submitted to the State Water Resources Control Board on June 14, 2004 Prepared by Andrew N. Cohen San Francisco Estuary Institute and Peter B. Moyle University of California, Davis The Authors: Andrew N. Cohen, Environmental Scientist, San Francisco Estuary Institute Dr. Cohen directs SFEI's Biological Invasions research program, which he founded in 1997. His research topics have included: invasions in San Francisco Bay, Puget Sound and southern California; invasion vectors including ships' ballast water and the baitworm trade; the spread and potential distribution of exotic species; species and environmental characteristics that affect invasion success; the treatment of ballast water; and the impacts of introduced plants in Pacific Coast salt marshes. In 1998 he was awarded a Pew Fellowship in Marine Conservation to investigate biological invasions in tropical marine waters, and in 1999 he received the San Francisco BayKeeper's Environmental Achievement Award in recognition of the his research and its contribution to policy development. He has served on the Executive Committee of the Western Regional Panel on Aquatic Nuisance Species, and on the Advisory Board of the National Aquatic Nuisance Species Clearinghouse. He also has authored several general-interest publications on the environment, including a guide to the natural history of San Francisco Bay. Professor Peter Moyle, University of California, Davis Dr. Moyle is a professor of fisheries biology and former Chair of the Department of Wildlife, Fish, and Conservation Biology, at the University of California at Davis. Dr. -
Hitch (Lavinia Exilicauda) Ecological Risk Screening Summary
Hitch (Lavinia exilicauda) Ecological Risk Screening Summary U.S. Fish and Wildlife Service, February 2011 Revised, January 2018 Web Version, 8/29/2018 Photo: R. Reyes. Public domain. Available: https://commons.wikimedia.org/wiki/File:Lavinia- exilicauda-21.jpg. (January 2018). 1 Native Range and Status in the United States Native Range From Froese and Pauly (2017): “North America: Sacramento-San Joaquin, Clear Lake, Russian River, and Pajaro-Salinas river drainages in California, USA.” Status in the United States From NatureServe (2017): “Range includes the Sacramento and San Joaquin drainages; Clear Lake, Lake County; Russian River; and Pajaro and Salinas rivers drainages, California (Moyle 2002, Page and Burr 2011). This species has been introduced in a few reservoirs within the native range, and it occurs in some waters as a result of transport in water diversion aqueducts (Moyle 2002).. [sic]” 1 From Nico (2018): “Status: Established in parts of southern California (Swift et al. 1993).” “McGinnis (1984) stated that this species was apparently introduced into the Russian River of California. Other authors (e.g., Page and Burr 1991) apparently consider it to be native to that drainage.” From Swift et al. (1993): “This species was reported from Pyramid Lake in 1984 […], Lake Silverwood in 1988 […], and one was taken in June 1992 at Pyramid Lake […]. It is possibly established or at least a regular immigrant from central California. […] Kimsey and Fisk (1960) reported one collected in Ramer Lake, Imperial County. Hitch were collected in the spring of 1992 from isolated pools of Aliso Canyon, tributary to Santa Clara River in Soledad Canyon […], and thought to have been there for about 40 years (Tom Hale, pers. -
Conservation Status of Imperiled North American Freshwater And
FEATURE: ENDANGERED SPECIES Conservation Status of Imperiled North American Freshwater and Diadromous Fishes ABSTRACT: This is the third compilation of imperiled (i.e., endangered, threatened, vulnerable) plus extinct freshwater and diadromous fishes of North America prepared by the American Fisheries Society’s Endangered Species Committee. Since the last revision in 1989, imperilment of inland fishes has increased substantially. This list includes 700 extant taxa representing 133 genera and 36 families, a 92% increase over the 364 listed in 1989. The increase reflects the addition of distinct populations, previously non-imperiled fishes, and recently described or discovered taxa. Approximately 39% of described fish species of the continent are imperiled. There are 230 vulnerable, 190 threatened, and 280 endangered extant taxa, and 61 taxa presumed extinct or extirpated from nature. Of those that were imperiled in 1989, most (89%) are the same or worse in conservation status; only 6% have improved in status, and 5% were delisted for various reasons. Habitat degradation and nonindigenous species are the main threats to at-risk fishes, many of which are restricted to small ranges. Documenting the diversity and status of rare fishes is a critical step in identifying and implementing appropriate actions necessary for their protection and management. Howard L. Jelks, Frank McCormick, Stephen J. Walsh, Joseph S. Nelson, Noel M. Burkhead, Steven P. Platania, Salvador Contreras-Balderas, Brady A. Porter, Edmundo Díaz-Pardo, Claude B. Renaud, Dean A. Hendrickson, Juan Jacobo Schmitter-Soto, John Lyons, Eric B. Taylor, and Nicholas E. Mandrak, Melvin L. Warren, Jr. Jelks, Walsh, and Burkhead are research McCormick is a biologist with the biologists with the U.S.