Increased Kv1 Channel Expression May Contribute to Decreased Sipsc Frequency Following Chronic Inhibition of NR2B-Containing NMDAR
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Using the Deadly M-Conotoxins As Probes of Voltage-Gated Sodium Channels
Toxicon 44 (2004) 117–122 www.elsevier.com/locate/toxicon Mini-review Using the deadly m-conotoxins as probes of voltage-gated sodium channels Ronald A. Li*, Gordon F. Tomaselli The Johns Hopkins University School of Medicine, 720 Rutland Avenue, Ross 871, Baltimore, MD 21205, USA Accepted 23 March 2004 Available online 19 June 2004 Abstract m-Conotoxins (m-CTX) are potent Na channel inhibitory peptides isolated from the venom of the predatory marine snail Conus geographus. m-CTXs exert their biological action by physically occluding the ion-conducting pore of voltage-gated Na (Nav) channels with a 1:1 stoichiometry in an all-or-none fashion. This article reviews our current knowledge of the mechanism of m-CTX and the associated structural and functional insights into its molecular target—Nav channels. q 2004 Elsevier Ltd. All rights reserved. Keywords: Na channel; Pore; m-Conotoxin Contents 1. Well-defined primary and 3-dimensional structures of m-CTX .............................. 117 2. Molecular target of m-CTX: voltage-gated Naþ channels . ................................. 119 3. m-CTX-pore interactions are site-specific.............................................. 119 4. Docking orientation of m-CTX ..................................................... 119 5. Isoform-specificity of m-CTX block ................................................. 121 6. m-CTX versus Kþ channel pore-blocking toxins ........................................ 121 7. Conclusion.................................................................... 121 Acknowledgements -
Report from the 26Th Meeting on Toxinology,“Bioengineering Of
toxins Meeting Report Report from the 26th Meeting on Toxinology, “Bioengineering of Toxins”, Organized by the French Society of Toxinology (SFET) and Held in Paris, France, 4–5 December 2019 Pascale Marchot 1,* , Sylvie Diochot 2, Michel R. Popoff 3 and Evelyne Benoit 4 1 Laboratoire ‘Architecture et Fonction des Macromolécules Biologiques’, CNRS/Aix-Marseille Université, Faculté des Sciences-Campus Luminy, 13288 Marseille CEDEX 09, France 2 Institut de Pharmacologie Moléculaire et Cellulaire, Université Côte d’Azur, CNRS, Sophia Antipolis, 06550 Valbonne, France; [email protected] 3 Bacterial Toxins, Institut Pasteur, 75015 Paris, France; michel-robert.popoff@pasteur.fr 4 Service d’Ingénierie Moléculaire des Protéines (SIMOPRO), CEA de Saclay, Université Paris-Saclay, 91191 Gif-sur-Yvette, France; [email protected] * Correspondence: [email protected]; Tel.: +33-4-9182-5579 Received: 18 December 2019; Accepted: 27 December 2019; Published: 3 January 2020 1. Preface This 26th edition of the annual Meeting on Toxinology (RT26) of the SFET (http://sfet.asso.fr/ international) was held at the Institut Pasteur of Paris on 4–5 December 2019. The central theme selected for this meeting, “Bioengineering of Toxins”, gave rise to two thematic sessions: one on animal and plant toxins (one of our “core” themes), and a second one on bacterial toxins in honour of Dr. Michel R. Popoff (Institut Pasteur, Paris, France), both sessions being aimed at emphasizing the latest findings on their respective topics. Nine speakers from eight countries (Belgium, Denmark, France, Germany, Russia, Singapore, the United Kingdom, and the United States of America) were invited as international experts to present their work, and other researchers and students presented theirs through 23 shorter lectures and 27 posters. -
Ligand and Voltage Gated Ion Channels
Print ISSN: 2319-2003 | Online ISSN: 2279-0780 IJBCP International Journal of Basic & Clinical Pharmacology DOI: http://dx.doi.org/10.18203/2319-2003.ijbcp20170314 Review Article Drug targets: ligand and voltage gated ion channels Nilan T. Jacob* Department of Pharmacology, Jawaharlal Institute of Postgraduate Medical Education and Research (JIPMER), ABSTRACT Puducherry, India The elucidation of a drug target is one of the earliest and most important steps in the drug discovery process. Ion channels encompassing both the ligand gated Received: 03 December 2016 and voltage gated types are the second most common drug targets after G- Revised: 07 December 2016 Protein Coupled Receptors (GPCR). Ion channels are basically pore forming Accepted: 27 December 2016 membrane proteins specialized for conductance of ions as per the concentration gradient. They are further broadly classified based on the energy (ATP) *Correspondence to: dependence into active ion channels/pumps and passive ion channels. Gating is Dr. Nilan T. Jacob, the regulatory mechanism of these ion channels by which binding of a specific Email: molecule or alteration in membrane potential induces conformational change in [email protected] the channel architecture to result in ion flow or its inhibition. Thus, the study of ligand and voltage gated ion channels becomes an important tool for drug Copyright: © the author(s), discovery especially during the initial stage of target identification. This review publisher and licensee Medip aims to describe the ligand and voltage gated ion channels along with discussion Academy. This is an open- on its subfamilies, channel architecture and key pharmacological modulators. access article distributed under the terms of the Creative Keywords: Drug targets, Ion channels, Ligand gated ion channels, Receptor Commons Attribution Non- Commercial License, which pharmacology, Voltage gated ion channels permits unrestricted non- commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. -
Immune Drug Discovery from Venoms
Accepted Manuscript Immune drug discovery from venoms Rocio Jimenez, Maria P. Ikonomopoulou, J.A. Lopez, John J. Miles PII: S0041-0101(17)30352-5 DOI: 10.1016/j.toxicon.2017.11.006 Reference: TOXCON 5763 To appear in: Toxicon Received Date: 18 July 2017 Revised Date: 14 November 2017 Accepted Date: 18 November 2017 Please cite this article as: Jimenez, R., Ikonomopoulou, M.P., Lopez, J.A., Miles, J.J., Immune drug discovery from venoms, Toxicon (2017), doi: 10.1016/j.toxicon.2017.11.006. This is a PDF file of an unedited manuscript that has been accepted for publication. As a service to our customers we are providing this early version of the manuscript. The manuscript will undergo copyediting, typesetting, and review of the resulting proof before it is published in its final form. Please note that during the production process errors may be discovered which could affect the content, and all legal disclaimers that apply to the journal pertain. ACCEPTED MANUSCRIPT Immune drug discovery from venoms Rocio Jimenez 1,2 , Maria P. Ikonomopoulou 2,3 , J.A. Lopez 1,2 and John J. Miles 1,2,3,4,5 1. Griffith University, School of Natural Sciences, Brisbane, Queensland, Australia 2. QIMR Berghofer Medical Research Institute, Brisbane, Queensland, Australia 3. School of Medicine, The University of Queensland, Brisbane, Australia 4. Centre for Biodiscovery and Molecular DevelopmentMANUSCRIPT of Therapeutics, AITHM, James Cook University, Cairns, Queensland, Australia 5. Institute of Infection and Immunity, Cardiff University School of Medicine, Heath Park, Cardiff, United Kingdom Corresponding author: A/Prof John J. Miles, Molecular Immunology Laboratory, Centre for Biodiscovery and Molecular Development of Therapeutics, AITHM, James Cook University, Cairns, Queensland,ACCEPTED Australia E-mail: [email protected]. -
For Toxicon Manuscript Draft Manuscript Number: Title
Elsevier Editorial System(tm) for Toxicon Manuscript Draft Manuscript Number: Title: Margatoxin is a non-selective inhibitor of human Kv1.3 K+ channels Article Type: Research Paper Keywords: Margatoxin, MgTx, non-selective, Kv1.3, Kv1.2 Corresponding Author: Prof. Gyorgy Panyi, MD PhD Corresponding Author's Institution: University of Debrecen, Medical and Health Science Center First Author: Adam Bartok Order of Authors: Adam Bartok; Agnes Toth, Ph.D.; Sandor Somodi, M.D., Ph.D.; Tibor G Szanto, Ph.D.; Peter Hajdu, Ph.D.; Gyorgy Panyi, MD PhD; Zoltan Varga, Ph.D. Abstract: During the last few decades many short-chain peptides have been isolated from the venom of different scorpion species. These toxins inhibit a variety of K+ channels by binding to and plugging the pore of the channels from the extracellular side thereby inhibiting ionic fluxes through the plasma membrane. The high affinity and selectivity of some toxins promote these peptides to become lead compounds for potential therapeutic use. Voltage-gated K+ channels can be classified into several families based on their gating properties and sequence homology. Members of a given family may have high sequence similarity, such as Kv1.1, Kv1.2 and Kv1.3 channels, therefore selective inhibitors of one specific channel are quite rare. The lack of selectivity of such peptides and the inhibition of more types of channels might lead to undesired side effects upon therapeutic application or may lead to incorrect conclusion regarding the role of a particular ion channel in a physiological or pathophysiological response either in vitro or in vivo. Margatoxin (MgTx) is often considered as a high affinity and selective inhibitor of the Kv1.3 channel. -
Design of a Truncated Cardiotoxin‑I Analogue with Potent Insulinotropic
Design of a Truncated Cardiotoxin‑I Analogue with Potent Insulinotropic Activity Thi Tuyet Nhung Nguyen, Benjamin Folch, Myriam Letourneau, Nam Hai Truong, Nicolas Doucet, Alain Fournier, David Chatenet To cite this version: Thi Tuyet Nhung Nguyen, Benjamin Folch, Myriam Letourneau, Nam Hai Truong, Nicolas Doucet, et al.. Design of a Truncated Cardiotoxin‑I Analogue with Potent Insulinotropic Activity. Journal of Medicinal Chemistry, American Chemical Society, 2014, 57 (6), pp.2623-33. 10.1021/jm401904q. hal-01177382 HAL Id: hal-01177382 https://hal.archives-ouvertes.fr/hal-01177382 Submitted on 14 Sep 2015 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Design of a Truncated Cardiotoxin-I Analogue with Potent Insulinotropic Activity Thi Tuyet Nhung Nguyen†‡§, Benjamin Folch†∥⊥, Myriam Létourneau†§, Nam Hai Truong‡, Nicolas Doucet†∥⊥, Alain Fournier*†§, and David Chatenet*†§ † INRS−Institut Armand-Frappier, Université du Québec, 531 Boulevard des Prairies Ville de Laval, Québec H7 V 1B7, QuébecCanada ‡ Vietnam Academy of Science and Technology, Institute -
Mechanism of M-Conotoxin PIIIA Binding to the Voltage-Gated Na+
Mechanism of m-Conotoxin PIIIA Binding to the + Voltage-Gated Na Channel NaV1.4 Rong Chen*, Anna Robinson, Shin-Ho Chung Research School of Biology, Australian National University, Canberra, ACT, Australia Abstract + Several subtypes of voltage-gated Na (NaV) channels are important targets for pain management. m-Conotoxins isolated from venoms of cone snails are potent and specific blockers of different NaV channel isoforms. The inhibitory effect of m- conotoxins on NaV channels has been examined extensively, but the mechanism of toxin specificity has not been understood in detail. Here the known structure of m-conotoxin PIIIA and a model of the skeletal muscle channel NaV1.4 are used to elucidate elements that contribute to the structural basis of m-conotoxin binding and specificity. The model of NaV1.4 is constructed based on the crystal structure of the bacterial NaV channel, NaVAb. Six different binding modes, in which the side chain of each of the basic residues carried by the toxin protrudes into the selectivity filter of NaV1.4, are examined in atomic detail using molecular dynamics simulations with explicit solvent. The dissociation constants (Kd) computed for two selected binding modes in which Lys9 or Arg14 from the toxin protrudes into the filter of the channel are within 2 fold; both values in close proximity to those determined from dose response data for the block of NaV currents. To explore the mechanism of PIIIA specificity, a double mutant of NaV1.4 mimicking NaV channels resistant to m-conotoxins and tetrodotoxin is constructed and the binding of PIIIA to this mutant channel examined. -
A Guide to Cell-Surface Protein Detection: Protocols and Products by Alomone Labs Contents
alomone labs empowering the spirit of science Live Cell Imaging Catalog A guide to cell-surface protein detection: Protocols and products By Alomone Labs Contents Introduction 3 Live cell imaging products 3 Products: Extracellular Antibodies Optimized for FACS 4-6 Products: Extracellular Antibodies Optimized for FACS and ICC 7 Product Highlight: Neurotransmission 8 Products: Extracellular Antibodies Optimized for ICC 9-10 Labeled Toxins 11 Product Highlight: Toxins 12 Labeled Neurotrophins 13 Protocols 14 Key Abbreviations 15 2 © www.alomone.com Introduction At Alomone Labs we have a diverse product portfolio that we have optimized specifically for use in flow cytometry (FACS) and live cell imaging. These reagents include directly conjugated and unconjugated antibodies, kits, labeled toxins and neurotrophins. Our products are developed entirely in-house and undergo rigorous QC with lot-specific testing. We have a specialism in research tools for membrane proteins and cover neuroscience, cancer, cardiovascular, immunology, stem cells, metabolism, development and cancer research fields. Live cell imaging products Extracellular Antibodies We have over 500+ products in our extracellular antibody range, to help you detect a wide range of key cell surface markers and membrane protein epitopes. They enable the rapid characterization of different cell lineages, and detect cell surface protein expression for your research needs. Immunocytochemistry (ICC) and flow cytometry (FACS) are the most common methods used with intact live cells, bypassing the need to fix and permeabilize your samples. We develop our extracellular antibodies to perform optimally in these applications. They have subsequently received multiple citations for use in leading peer-review publications. ICC using live cells with our extracellular antibodies can be used to detect protein expression, monitor cell movement, study protein transport and internalization. -
Molecular Dynamics Simulation Reveals Specific Interaction
toxins Article Molecular Dynamics Simulation Reveals Specific Interaction Sites between Scorpion Toxins and Kv1.2 Channel: Implications for Design of Highly Selective Drugs Shouli Yuan 1,2, Bin Gao 1 and Shunyi Zhu 1,* ID 1 Group of Peptide Biology and Evolution, State Key Laboratory of Integrated Management of Pest Insects and Rodents, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China; [email protected] (S.Y.); [email protected] (B.G.) 2 College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100049, China * Correspondence: [email protected] Academic Editors: Bryan Grieg Fry and Steve Peigneur Received: 29 August 2017; Accepted: 19 October 2017; Published: 1 November 2017 Abstract: The Kv1.2 channel plays an important role in the maintenance of resting membrane potential and the regulation of the cellular excitability of neurons, whose silencing or mutations can elicit neuropathic pain or neurological diseases (e.g., epilepsy and ataxia). Scorpion venom contains a variety of peptide toxins targeting the pore region of this channel. Despite a large amount of structural and functional data currently available, their detailed interaction modes are poorly understood. In this work, we choose four Kv1.2-targeted scorpion toxins (Margatoxin, Agitoxin-2, OsK-1, and Mesomartoxin) to construct their complexes with Kv1.2 based on the experimental structure of ChTx-Kv1.2. Molecular dynamics simulation of these complexes lead to the identification of hydrophobic patches, hydrogen-bonds, and salt bridges as three essential forces mediating the interactions between this channel and the toxins, in which four Kv1.2-specific interacting amino acids (D353, Q358, V381, and T383) are identified for the first time. -
Discovery and Characterization of Nav Modulatory Venom Peptides
Discovery and characterization of NaV modulatory venom peptides Joshua Seth Wingerd B.Sc. of Molecular Biology A thesis submitted for the degree of Doctor of Philosophy at The University of Queensland in 2013 Institute for Molecular Biosciences Abstract Voltage-gated sodium channels (NaV) are integral membrane proteins that are responsible for the increase in sodium permeability that initiates and propagates the rising phase of action potentials, carrying electrical signals along nerve fibers and through excitable cells. NaV channels play a diverse role in neurophysiology and neurotransmission, as well as serving as molecular targets for several groups of neurotoxins that bind to different receptor sites and alter voltage-dependent activation, inactivation and conductance. There are nine NaV channel isoforms so far discovered, each of which display distinct functional profiles and tissue-specific expression patterns. The modulation of specific isoforms for therapeutic purposes has become an important research objective for the treatment of conductance diseases exhibiting phenotypes of chronic pain, epilepsy, myotonia, seizure, and cardiac arrhythmia. However, because of the high sequence similarity and structural homology between NaV channel isoforms, many current therapeutics that target NaV channels – the vast majority of which are small molecules – lack specificity between isoforms, or even other voltage-gated ion channels. The current push for greater selectivity while maintaining a relevant degree of potency has led the focus away from small molecules and towards the discovery and development of peptidic ligands for therapeutic use. Venom derived peptides have proven to be naturally potent and selective bioactive molecules, exhibiting inherent secondary structures that add stability through the formation of disulfide bonds. -
Module 10: Nerve Local Potentials and Action Potentials
PEER-LED TEAM LEARNING ANATOMY & PHYSIOLOGY MODULE 10: NERVE LOCAL POTENTIALS AND ACTION POTENTIALS NICHOLE MCDANIEL, PH.D. I. Introduction A neuron is a single cell that is specialized to transmit electric signals (called impulses) from one part of the body to another. A nerve is actually made up of many individual neurons bundled together. To understand how signals travel from a receptor in the skin to the central nervous system (CNS) or from the CNS to a muscle, we have to build on the membrane transport concepts that we have already learned. You already have the tools that you need to understand local and action potentials—now you’ll just add information about where in the neuron they occur, and how one thing leads to another to cause nerve conduction. Prepare for your workshop by reading in your textbook (Chapter 12: 444-475) and completing the Pre- Workshop Activities below, really! Show your work in these pages. II. Pre-Workshop Activities Activity A. Define the following terms. action potential ligand afferent neuron ligand-gated potassium channel axon ligand-gated sodium channel axon hillock local potentials axon terminal millivolt cell body myelin sheath central nervous system myelinated dendrites neuron depolarization neurotransmitter efferent neuron postsynaptic neuron hyperpolarization presynaptic neuron impulses repolarization Peer-Led Team Learning Anatomy and Physiology, Module 10: Nerve Local Potentials and Action Potentials, Page 1 – Nichole McDaniel, 2012, www.pltlis.org resting membrane potential synapse Schwann cell threshold voltage Na+/K+-ATPase voltage-gated potassium channel soma voltage-gated sodium channel Activity B. Label the figure to the right with the terms in bold print below. -
Focus on Scorpion Toxins
ISSN 0006-2979, Biochemistry (Moscow), 2015, Vol. 80, No. 13, pp. 1764-1799. © Pleiades Publishing, Ltd., 2015. Original Russian Text © A. I. Kuzmenkov, E. V. Grishin, A. A. Vassilevski, 2015, published in Uspekhi Biologicheskoi Khimii, 2015, Vol. 55, pp. 289-350. REVIEW Diversity of Potassium Channel Ligands: Focus on Scorpion Toxins A. I. Kuzmenkov*, E. V. Grishin, and A. A. Vassilevski* Shemyakin–Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997 Moscow, Russia; E-mail: [email protected]; [email protected] Received June 16, 2015 Revision received July 21, 2015 Abstract—Potassium (K+) channels are a widespread superfamily of integral membrane proteins that mediate selective transport of K+ ions through the cell membrane. They have been found in all living organisms from bacteria to higher mul- ticellular animals, including humans. Not surprisingly, K+ channels bind ligands of different nature, such as metal ions, low molecular mass compounds, venom-derived peptides, and antibodies. Functionally these substances can be K+ channel pore blockers or modulators. Representatives of the first group occlude the channel pore, like a cork in a bottle, while the second group of ligands alters the operation of channels without physically blocking the ion current. A rich source of K+ channel ligands is venom of different animals: snakes, sea anemones, cone snails, bees, spiders, and scorpions. More than a half of the known K+ channel ligands of polypeptide nature are scorpion toxins (KTx), all of which are pore blockers. These com- pounds have become an indispensable molecular tool for the study of K+ channel structure and function. A recent special interest is the possibility of toxin application as drugs to treat diseases involving K+ channels or related to their dysfunction (channelopathies).