2009 Trappe Quebec Conf
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
2011 APS-IPPC Joint Meeting Abstracts of Presentations
2011 APS-IPPC Joint Meeting Abstracts of Presentations Abstracts submitted for presentation at the APS-IPPC 2011 Joint Meeting in Honolulu, Hawaii, August 6–10, 2011 (including abstracts submitted for presentation at the 2011 APS Pacific Division Meeting). The abstracts are arranged alphabetically by the first author’s name. Prioritizing cover crops for improving root health and yield of vegetables ability of non-aflatoxigenic strains to prevent aflatoxin production by in the Northeast subsequent challenge with toxigenic A. flavus strains was assessed in 4 G. S. ABAWI (1), C. H. Petzoldt (1), B. K. Gugino (2), J. A. LaMondia (3) experiments. Non-aflatoxigenic strain K49 effectively prevented toxin (1) Cornell University, Geneva, NY, U.S.A.; (2) The Pennsylvania State production at various inoculation levels in 3 experiments. K49 also was University, University Park, PA, U.S.A.; (3) CT Agric. Exp. Station, Windsor, evaluated alongside the widely used biocontrol strains NRRL 21882 (Afla- CT, U.S.A. Guard®) and AF36 for prevention of aflatoxin and CPA production by strains Phytopathology 101:S1 K54 and F3W4. K49 and NRRL 21882 were superior to AF36 in reducing aflatoxins. K49 and NRRL 21882 produced no CPA, and reduced CPA and Cover crops are used increasingly by growers to improve soil quality, prevent aflatoxin production in a subsequent challenge with F3W4 and K54 by 84– erosion, increase organic matter, and suppress root pathogens and pests. 97% and 83–98%, respectively. In contrast, AF36 inoculation and subsequent However, limited information is available on their use for suppressing challenge with F3W4 reduced aflatoxins by 20% and 93% with K54, but pathogens (Rhizoctonia, Pythium, Fusarium, Thieloviopsis, Pratylenchus, and showed no CPA reduction with F3W4 and only 62% CPA reduction with Meloidogyne) of vegetables grown in the Northeast. -
Discovering the Environmental Factors Affecting the Distribution of Terfezia Claveryi Chatin in the Northwest of the Region of Murcia
Discovering the environmental factors affecting the distribution of Terfezia claveryi Chatin in the Northwest of the Region of Murcia Motaz Abdelaziz st 21 September 2018 Supervised by: Prof. Asuncion Morte (The University of Murcia) Prof. Jose-Antonio Bonet (The University of Lleida) Dr. Alfonso Navarro (The University of Murcia) 1 University of Lleida School of Agrifood and Forestry Science and Engineering Master thesis: Discovering the environmental factors affecting the distribution of Terfezia claveryi Chatin in the Northwest of the Region of Murcia Presented by: Motaz Abdelaziz Supervised by: Prof. Asuncio Morte Prof. Jose-Antonio Bonet Dr. Alfonoso Navarro 2 Table of Contents ABSTRACT: ..................................................................................................................................................... 4 1. INTRODUCTION .................................................................................................................................... 5 1.1. Importance of fungi in Europe ................................................................................................... 5 1.2. What is a desert truffle? ............................................................................................................ 5 1.3. Tefezia claveryi distribution. ..................................................................................................... 7 1.4. T. claveryi economical value ..................................................................................................... -
Phd. Thesis Sana Jabeen.Pdf
ECTOMYCORRHIZAL FUNGAL COMMUNITIES ASSOCIATED WITH HIMALAYAN CEDAR FROM PAKISTAN A dissertation submitted to the University of the Punjab in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY in BOTANY by SANA JABEEN DEPARTMENT OF BOTANY UNIVERSITY OF THE PUNJAB LAHORE, PAKISTAN JUNE 2016 TABLE OF CONTENTS CONTENTS PAGE NO. Summary i Dedication iii Acknowledgements iv CHAPTER 1 Introduction 1 CHAPTER 2 Literature review 5 Aims and objectives 11 CHAPTER 3 Materials and methods 12 3.1. Sampling site description 12 3.2. Sampling strategy 14 3.3. Sampling of sporocarps 14 3.4. Sampling and preservation of fruit bodies 14 3.5. Morphological studies of fruit bodies 14 3.6. Sampling of morphotypes 15 3.7. Soil sampling and analysis 15 3.8. Cleaning, morphotyping and storage of ectomycorrhizae 15 3.9. Morphological studies of ectomycorrhizae 16 3.10. Molecular studies 16 3.10.1. DNA extraction 16 3.10.2. Polymerase chain reaction (PCR) 17 3.10.3. Sequence assembly and data mining 18 3.10.4. Multiple alignments and phylogenetic analysis 18 3.11. Climatic data collection 19 3.12. Statistical analysis 19 CHAPTER 4 Results 22 4.1. Characterization of above ground ectomycorrhizal fungi 22 4.2. Identification of ectomycorrhizal host 184 4.3. Characterization of non ectomycorrhizal fruit bodies 186 4.4. Characterization of saprobic fungi found from fruit bodies 188 4.5. Characterization of below ground ectomycorrhizal fungi 189 4.6. Characterization of below ground non ectomycorrhizal fungi 193 4.7. Identification of host taxa from ectomycorrhizal morphotypes 195 4.8. -
Download the Late-Successional Reserve
Chapter 1 Introduction and Highlights Chapter 1 Table of Contents Map 1-1 Late-Successional Reserves Map.........................................................................1-ii Introduction........................................................................................................................... 1-1 1-1 Management Objectives ............................................................................................ 1-2 1-2 Approach to the Assessment...................................................................................... 1-2 1-3 Highlights of the Assessment .................................................................................... 1-3 Literature Cited ................................................................................................................. 1-4 1-4 REO Exemption Letter .............................................................................................. 1-5 1-i Chapter 1 – Introduction Map 1-1 Late-Successional Reserves November 1997 Map 1-1 Late-Successional Reserves Map 1-ii Chapter 1 - Introduction November 1997 Chapter 1 Introduction In 1994 the Northwest Forest Plan watershed analyses should be examined (NWFP) designated a network of Late- concurrently with this Assessment. Successional Reserves (LSR) with the For the purposes of this Assessment, object of protecting and enhancing there are nine Late-Successional conditions of late-successional and old- Reserves including one Managed Late- growth forest ecosystems. As part of its Successional Area on the -
Truffle Farming in North America
Examples of Truffle Cultivation Working with Riparian Habitat Restoration and Preservation Charles K. Lefevre, Ph.D. New World Truffieres, Inc. Oregon Truffle Festival, LLC What Are Truffles? • Mushrooms that “fruit” underground and depend on animals to disperse their spores • Celebrated delicacies for millennia • They are among the world’s most expensive foods • Most originate in the wild, but three valuable European species are domesticated and are grown on farms throughout the world What Is Their Appeal? • The likelihood of their reproductive success is a function of their ability to entice animals to locate and consume them • Produce strong, attractive aromas to capture attention of passing animals • Androstenol and other musky compounds French Truffle Production Trend 1900-2000 Driving Forces: • Phylloxera • Urbanization Current Annual U.S. Import volume: 15-20 tons Price Trend:1960-2000 The Human-Truffle Connection • Truffles are among those organisms that thrive in human- created environments • Urban migration and industrialization have caused the decline of truffles not by destroying truffle habitat directly, but by eliminating forms of traditional agriculture that created new truffle habitat • Truffles are the kind of disturbance-loving organisms that we can grow Ectomycorrhizae: Beneficial Symbiosis Between the Truffle Fungus and Host Tree Roots Inoculated Seedlings • Produced by five companies in the U.S. and Canada planting ~200 acres annually • ~3000 acres planted per year globally • Cultivated black truffle production now -
The Diversity of Terfezia Desert Truffles: New Species and a Highly Variable Species Complex with Intrasporocarpic Nrdna ITS Heterogeneity
Mycologia, 103(4), 2011, pp. 841–853. DOI: 10.3852/10-312 # 2011 by The Mycological Society of America, Lawrence, KS 66044-8897 The diversity of Terfezia desert truffles: new species and a highly variable species complex with intrasporocarpic nrDNA ITS heterogeneity Ga´bor M. Kova´cs1 INTRODUCTION Tı´mea K. Bala´zs Desert truffles are hypogeous ascomycetes living on Department of Plant Anatomy, Institute of Biology, Eo¨tvo¨s Lora´nd University, Pa´zma´ny Pe´ter se´ta´ny 1/C, several continents (Dı´ez et al. 2002, Ferdman et al. H-1117 Budapest, Hungary 2005, Trappe et al. 2010a) where they play important roles as mycorrhizal partners of plants and their fruit Francisco D. Calonge bodies are a potentially important food source Marı´a P. Martı´n (Trappe et al. 2008a, b). A study revealed that fungi Departamento de Micologı´a, Real Jardı´n Bota´nico, adapted to deserts evolved in several lineages of the CSIC, Plaza de Murillo 2, 28014 Madrid, Spain Pezizaceae (Trappe et al. 2010a). Among the genera in these lineages Terfezia represents the best known and probably most frequently collected desert truffles Abstract: Desert truffles belonging to Terfezia are (Dı´ez et al. 2002, Læssøe and Hansen 2007). well known mycorrhizal members of the mycota of the Although several members of the genus were de- Mediterranean region and the Middle East. We aimed scribed from different continents, recent molecular- to test (i) whether the morphological criteria of taxonomic studies revealed that probably only the Terfezia species regularly collected in Spain enable species from the Mediterranean region and the their separation and (ii) whether the previously Middle East belong in Terfezia s. -
This File Was Created by Scanning the Printed Publication. Text Errors Identified by the Software Have Been Corrected: However
pp. l'v1vcu/ogia, 102(5),2010, 1058-1065.001: 10.3852/09,232 by The Mycolog-icai Society of America, Lawrence, ( 2010 KS 66044-8897 Kalapuya brunnea gen. & sp. nov. and its relationship to the other sequestrate genera in Morchellaceae Matthew J. Trappe' it from Leucangium and other known genera. Here James M. Trappe we describe this genus and its only known species, co.',�s,tenH and Society, Oregon Kalapuya 1Yrunnea, and discuss its relationship with Oregon 97331,5752 other genera \\ithin the Morchellaceae. Gregory M. Bonito Department oj Biology, Duke Durham, MATERIALS AND y[ETHODS North Carolina 27708 Sections were prepared for light microscopy by hand and mounted in dH20, Melzer's reagent and cotton blue as well as by microtoming of paraffin-embedded specimens and Kalapuya is described as a new, monotypic Abstract: staining the thin sections in safranin-fast gTeen. All truffle genus in the Morchellaceae knovm only from microscopic measurements were made in dH20 mounts at the Pacific northwestern United States. Its relationship 400X or 1000X with a Zeiss GSL research microscope. to other hypogeous genera within Morchellaceae is Melzer's reagent was used to test for amyloid reactions and explored by phylogenetic analysis of the ribosomal LSU cotton blue for cyanescent reactions. EFlcx Glebal tissue samples were sequenced at the Institute for and protein coding region. The type species, K lxrunnea, occurs in Douglas-fir forests up to about 50 y Genome Sciences and Policy at Duke University. Clean old on the west slope of the Cascade Range in Oregon fungal tissue was removed from within sporocarps, placed in and in the Coastal Ranges of Oregon and northern microcentrifuge tubes and ground with micropestles. -
Genetic Diversity of the Genus Terfezia (Pezizaceae, Pezizales): New Species and New Record from North Africa
Phytotaxa 334 (2): 183–194 ISSN 1179-3155 (print edition) http://www.mapress.com/j/pt/ PHYTOTAXA Copyright © 2018 Magnolia Press Article ISSN 1179-3163 (online edition) https://doi.org/10.11646/phytotaxa.334.2.7 Genetic diversity of the genus Terfezia (Pezizaceae, Pezizales): New species and new record from North Africa FATIMA EL-HOUARIA ZITOUNI-HAOUAR1*, JUAN RAMÓN CARLAVILLA2, GABRIEL MORENO2, JOSÉ LUIS MANJÓN2 & ZOHRA FORTAS1 1 Laboratoire de Biologie des Microorganismes et de Biotechnologie, Département de Biotechnologie, Faculté des Sciences de la nature et de la vie, Université d’Oran 1 Ahmed Ben Bella, Algeria 2 Departamento Ciencias de la Vida, Facultad de Biología, Universidad de Alcalá, 28805 Alcalá de Henares, Madrid, Spain * Corresponding author: [email protected] Abstract Morphological and phylogenetic analyses of large ribosomal subunit (28S rDNA) and internal transcribed spacer (ITS rDNA) of Terfezia samples collected from several bioclimatic zones in Algeria and Spain revealed the presence of six dis- tinct Terfezia species: T. arenaria, T. boudieri, T. claveryi; T. eliocrocae (reported here for the first time from North Africa), T. olbiensis, and a new species, T. crassiverrucosa sp. nov., proposed and described here, characterized by its phylogenetic position and unique combination of morphological characters. A discussion on the unresolved problems in the taxonomy of the spiny-spored Terfezia species is conducted after the present results. Key words: desert truffles, Pezizaceae, phylogeny, taxonomy Introduction The genus Terfezia (Tul. & C.Tul.) Tul. & C. Tul. produce edible hypogeous ascomata growing mostly in arid and semi-arid ecosystems, although they can be found also in a wide range of habitats, such as temperate deciduous forests, conifer forests, prairies, or even heath lands (Moreno et al. -
Categorization of Orthologous Gene Clusters in 92 Ascomycota Genomes Reveals Functions Important for Phytopathogenicity
Journal of Fungi Article Categorization of Orthologous Gene Clusters in 92 Ascomycota Genomes Reveals Functions Important for Phytopathogenicity Daniel Peterson 1, Tang Li 2, Ana M. Calvo 1,* and Yanbin Yin 2,* 1 Department of Biological Sciences, Northern Illinois University, DeKalb, IL 60115, USA; [email protected] 2 Nebraska Food for Health Center, Department of Food Science and Technology, University of Nebraska–Lincoln, Lincoln, NE 68588, USA; [email protected] * Correspondence: [email protected] (A.M.C.); [email protected] (Y.Y.); Tel.: +1-(815)-753-0451 (A.M.C.); +1-(402)-472-4303 (Y.Y.) Abstract: Phytopathogenic Ascomycota are responsible for substantial economic losses each year, destroying valuable crops. The present study aims to provide new insights into phytopathogenicity in Ascomycota from a comparative genomic perspective. This has been achieved by categorizing orthologous gene groups (orthogroups) from 68 phytopathogenic and 24 non-phytopathogenic Ascomycota genomes into three classes: Core, (pathogen or non-pathogen) group-specific, and genome-specific accessory orthogroups. We found that (i) ~20% orthogroups are group-specific and accessory in the 92 Ascomycota genomes, (ii) phytopathogenicity is not phylogenetically determined, (iii) group-specific orthogroups have more enriched functional terms than accessory orthogroups and this trend is particularly evident in phytopathogenic fungi, (iv) secreted proteins with signal peptides and horizontal gene transfers (HGTs) are the two functional terms that show the highest Citation: Peterson, D.; Li, T.; Calvo, occurrence and significance in group-specific orthogroups, (v) a number of other functional terms are A.M.; Yin, Y. Categorization of Orthologous Gene Clusters in 92 also identified to have higher significance and occurrence in group-specific orthogroups. -
(<I>Morchella</I>) Species in the Elata Subclade
MYCOTAXON ISSN (print) 0093-4666 (online) 2154-8889 © 2016. Mycotaxon, Ltd. April–June 2016—Volume 131, pp. 467–482 http://dx.doi.org/10.5248/131.467 Four new morel (Morchella) species in the elata subclade (M. sect. Distantes) from Turkey Hatıra Taşkın1*, Hasan Hüseyİn Doğan2, Saadet Büyükalaca1, Philippe Clowez3, Pierre-Arthur Moreau4 & Kerry O’Donnell5 1Department of Horticulture, Faculty of Agriculture, University of Çukurova, Adana, 01330, Turkey 2Department of Biology, Faculty of Science, University of Selçuk, Konya, 42079, Turkey 356 place des Tilleuls, F-60400 Pont-l’Evêque, France 4 EA 4483, UFR Pharmacie, Université de Lille, F-59000 Lille cedex, France 5Mycotoxin Prevention and Applied Mycology Research Unit, National Center for Agricultural Utilization Research, US Department of Agriculture, Agricultural Research Service, 1815 North University Street, Peoria, Illinois 61604, USA * Correspondence to: [email protected] Abstract—Four Turkish Morchella species identified in published multilocus molecular phylogenetic analyses are described here as new, using detailed macro- and microscopic data: M. mediterraneensis (Mel-27), M. fekeensis (Mel-28), M. magnispora (Mel-29), and M. conifericola (Mel-32). A distribution map of morels identified to date in Turkey is also provided. Key words—Ascomycota, conservation, edible fungi, Morchellaceae, systematics, taxonomy Introduction True morels (Morchella), among the most highly prized edible macrofungi, are classified in the Morchellaceae (Pezizales, Ascomycota). This monophyletic family also includes Disciotis, Kalapuya, Fischerula, Imaia, Leucangium, and Verpa (O’Donnell et al. 1997, Trappe et al. 2010). Several multilocus DNA sequence-based analyses of Morchella that employed phylogenetic species recognition based on genealogical concordance (GCPSR sensu Taylor et al. 2000) have revealed that most species exhibit continental endemism and provincialism in the northern hemisphere (Du et al. -
Proquest Dissertations
Bedouin ethnobotany: Plant concepts and plant use in a desert pastoral world Item Type text; Dissertation-Reproduction (electronic) Authors Mandaville, James Paul Publisher The University of Arizona. Rights Copyright © is held by the author. Digital access to this material is made possible by the University Libraries, University of Arizona. Further transmission, reproduction or presentation (such as public display or performance) of protected items is prohibited except with permission of the author. Download date 09/10/2021 11:40:39 Link to Item http://hdl.handle.net/10150/290142 BEDOUIN ETHNOBOTANY: PLANT CONCEPTS AND PLANT USE IN A DESERT PASTORAL WORLD by James Paul Mandaville Copyright © James Paul Mandaville 2004 A Dissertation Submitted to the Faculty of the GRADUATE INTERDISCIPLINARY PROGRAM IN ARID LANDS RESOURCE SCIENCES In Partial Fulfillment of the Requirements For the Degree of DOCTOR OF PHILOSOPHY In the Graduate College THE UNIVERSITY OF ARIZONA 2004 UMI Number: 3158126 Copyright 2004 by Mandaville, James Paul All rights reserved. INFORMATION TO USERS The quality of this reproduction is dependent upon the quality of the copy submitted. Broken or indistinct print, colored or poor quality illustrations and photographs, print bleed-through, substandard margins, and improper alignment can adversely affect reproduction. In the unlikely event that the author did not send a complete manuscript and there are missing pages, these will be noted. Also, if unauthorized copyright material had to be removed, a note will indicate the deletion. UMI UMI Microform 3158126 Copyright 2005 by ProQuest Information and Learning Company. All rights reserved. This microform edition is protected against unauthorized copying under Title 17, United States Code. -
Leucangium Microspermum: Re-Examination of Japanese L
Online publication; available at: http://jats-truffles.org/truffology/ Truffology 3 (1): –1 7 (2020) Original peer-reviewed article (原著論文 ; 査読有) Leucangium microspermum: Re-examination of Japanese L. carthusianum reveals its taxonomic novelty 日本産Leucangium carthusianum の再検討結果に基づく新種 L. microspermum の記載 Kohei Yamamoto1*, Hiromi Sasaki2, Muneyuki Ohmae3, Takamichi Orihara4 1* 2 3 4 山本 航平 , 佐々木廣海 , 大前 宗之 , 折原 貴道 1 Tochigi Prefectural Museum, 2-2 Mutsumi-cho, Utsunomiya-shi, Tochigi 320-0865, Japan 栃木県立博物館, 〒 320-0865 栃木県宇都宮市睦町 2-2 2 Mycologist Circle of Japan, Fujisawa-shi, Kanagawa, Japan 菌類懇話会, 神奈川県藤沢市 3 Hokken Co. Ltd., 7-3 Ekihigashimachi, Mibu-machi, Shimotsuga-gun, Tochigi 321-0222, Japan 株式会社北研, 〒 321-0222 栃木県下都賀郡壬生町駅東町 7-3 4 Kanagawa Prefectural Museum of Natural History, 499 Iryuda, Odawara-shi, Kanagawa 250-0031, Japan 神奈川県立生命の星 ・ 地球博物館, 〒 250-0031 神奈川県小田原市入生田 499 * Corresponding author (主著者) E-mail: [email protected] Abstract The genus Leucangium (Morchellaceae, Pezizales) is a truffle-like ascomycete that includes the type species L. carthusianum from Europe and North America, as well as a variety from China. Two specimens collected from subalpine conifer forests in Hokkaido in 2004 and 2011 are the only records of the genus in Japan. Since they were identified as L. carthusianum without detailed examination, in-depth morphological observation and phylogenetic analysis were necessary to confirm their taxonomic placement. In this study, we critically re- examined the Japanese specimens. Morphologically, the length of ascospores of the Japanese L. carthusianum was found to be much shorter than that indicated by the original descriptions of the type species and its variety. Phylogenetic analyses based on two nuclear ribosomal DNA regions showed significant genetic divergence between the Japanese specimens and other specimens of L.