GM1 Signaling Through the GDNF Receptor
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A Computational Approach for Defining a Signature of Β-Cell Golgi Stress in Diabetes Mellitus
Page 1 of 781 Diabetes A Computational Approach for Defining a Signature of β-Cell Golgi Stress in Diabetes Mellitus Robert N. Bone1,6,7, Olufunmilola Oyebamiji2, Sayali Talware2, Sharmila Selvaraj2, Preethi Krishnan3,6, Farooq Syed1,6,7, Huanmei Wu2, Carmella Evans-Molina 1,3,4,5,6,7,8* Departments of 1Pediatrics, 3Medicine, 4Anatomy, Cell Biology & Physiology, 5Biochemistry & Molecular Biology, the 6Center for Diabetes & Metabolic Diseases, and the 7Herman B. Wells Center for Pediatric Research, Indiana University School of Medicine, Indianapolis, IN 46202; 2Department of BioHealth Informatics, Indiana University-Purdue University Indianapolis, Indianapolis, IN, 46202; 8Roudebush VA Medical Center, Indianapolis, IN 46202. *Corresponding Author(s): Carmella Evans-Molina, MD, PhD ([email protected]) Indiana University School of Medicine, 635 Barnhill Drive, MS 2031A, Indianapolis, IN 46202, Telephone: (317) 274-4145, Fax (317) 274-4107 Running Title: Golgi Stress Response in Diabetes Word Count: 4358 Number of Figures: 6 Keywords: Golgi apparatus stress, Islets, β cell, Type 1 diabetes, Type 2 diabetes 1 Diabetes Publish Ahead of Print, published online August 20, 2020 Diabetes Page 2 of 781 ABSTRACT The Golgi apparatus (GA) is an important site of insulin processing and granule maturation, but whether GA organelle dysfunction and GA stress are present in the diabetic β-cell has not been tested. We utilized an informatics-based approach to develop a transcriptional signature of β-cell GA stress using existing RNA sequencing and microarray datasets generated using human islets from donors with diabetes and islets where type 1(T1D) and type 2 diabetes (T2D) had been modeled ex vivo. To narrow our results to GA-specific genes, we applied a filter set of 1,030 genes accepted as GA associated. -
Α7 Nicotinic Receptor Up-Regulation in Cholinergic Basal Forebrain Neurons in Alzheimer Disease
ORIGINAL CONTRIBUTION ␣7 Nicotinic Receptor Up-regulation in Cholinergic Basal Forebrain Neurons in Alzheimer Disease Scott E. Counts, PhD; Bin He, MD; Shaoli Che, MD, PhD; Milos D. Ikonomovic, MD; Steven T. DeKosky, MD; Stephen D. Ginsberg, PhD; Elliott J. Mufson, PhD Background: Dysfunction of basocortical cholinergic pro- Participants: Participants were members of the Rush jection neurons of the nucleus basalis (NB) correlates with Religious Orders Study cohort. cognitive deficits in Alzheimer disease (AD). Nucleus ba- Main Outcome Measures: Real-time quantitative poly- salis neurons receive cholinergic inputs and express nico- merase chain reaction was performed to validate micro- tinic acetylcholine receptors (nAChRs) and muscarinic array findings. AChRs (mAChRs), which may regulate NB neuron activ- ity in AD. Although alterations in these AChRs occur in Results: Cholinergic NB neurons displayed a statisti- the AD cortex, there is little information detailing whether cally significant up-regulation of ␣7 nAChR messenger defects in nAChR and mAChR gene expression occur in RNA expression in subjects with mild to moderate AD cholinergic NB neurons during disease progression. compared with those with NCI and MCI (PϽ.001). No differences were found for other nAChR and mAChR sub- types across the cohort. Expression levels of ␣7 nAChRs Objective: To determine whether nAChR and mAChR were inversely associated with Global Cognitive Score and gene expression is altered in cholinergic NB neurons dur- with Mini-Mental State Examination performance. ing the progression of AD. Conclusions: Up-regulation of ␣7 nAChRs may signal Design: Individual NB neurons from subjects diag- a compensatory response to maintain basocortical cho- nosed ante mortem as having no cognitive impairment linergic activity during AD progression. -
Research Article Microarray-Based Comparisons of Ion Channel Expression Patterns: Human Keratinocytes to Reprogrammed Hipscs To
Hindawi Publishing Corporation Stem Cells International Volume 2013, Article ID 784629, 25 pages http://dx.doi.org/10.1155/2013/784629 Research Article Microarray-Based Comparisons of Ion Channel Expression Patterns: Human Keratinocytes to Reprogrammed hiPSCs to Differentiated Neuronal and Cardiac Progeny Leonhard Linta,1 Marianne Stockmann,1 Qiong Lin,2 André Lechel,3 Christian Proepper,1 Tobias M. Boeckers,1 Alexander Kleger,3 and Stefan Liebau1 1 InstituteforAnatomyCellBiology,UlmUniversity,Albert-EinsteinAllee11,89081Ulm,Germany 2 Institute for Biomedical Engineering, Department of Cell Biology, RWTH Aachen, Pauwelstrasse 30, 52074 Aachen, Germany 3 Department of Internal Medicine I, Ulm University, Albert-Einstein Allee 11, 89081 Ulm, Germany Correspondence should be addressed to Alexander Kleger; [email protected] and Stefan Liebau; [email protected] Received 31 January 2013; Accepted 6 March 2013 Academic Editor: Michael Levin Copyright © 2013 Leonhard Linta et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Ion channels are involved in a large variety of cellular processes including stem cell differentiation. Numerous families of ion channels are present in the organism which can be distinguished by means of, for example, ion selectivity, gating mechanism, composition, or cell biological function. To characterize the distinct expression of this group of ion channels we have compared the mRNA expression levels of ion channel genes between human keratinocyte-derived induced pluripotent stem cells (hiPSCs) and their somatic cell source, keratinocytes from plucked human hair. This comparison revealed that 26% of the analyzed probes showed an upregulation of ion channels in hiPSCs while just 6% were downregulated. -
Stem Cells and Ion Channels
Stem Cells International Stem Cells and Ion Channels Guest Editors: Stefan Liebau, Alexander Kleger, Michael Levin, and Shan Ping Yu Stem Cells and Ion Channels Stem Cells International Stem Cells and Ion Channels Guest Editors: Stefan Liebau, Alexander Kleger, Michael Levin, and Shan Ping Yu Copyright © 2013 Hindawi Publishing Corporation. All rights reserved. This is a special issue published in “Stem Cells International.” All articles are open access articles distributed under the Creative Com- mons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Editorial Board Nadire N. Ali, UK Joseph Itskovitz-Eldor, Israel Pranela Rameshwar, USA Anthony Atala, USA Pavla Jendelova, Czech Republic Hannele T. Ruohola-Baker, USA Nissim Benvenisty, Israel Arne Jensen, Germany D. S. Sakaguchi, USA Kenneth Boheler, USA Sue Kimber, UK Paul R. Sanberg, USA Dominique Bonnet, UK Mark D. Kirk, USA Paul T. Sharpe, UK B. Bunnell, USA Gary E. Lyons, USA Ashok Shetty, USA Kevin D. Bunting, USA Athanasios Mantalaris, UK Igor Slukvin, USA Richard K. Burt, USA Pilar Martin-Duque, Spain Ann Steele, USA Gerald A. Colvin, USA EvaMezey,USA Alexander Storch, Germany Stephen Dalton, USA Karim Nayernia, UK Marc Turner, UK Leonard M. Eisenberg, USA K. Sue O’Shea, USA Su-Chun Zhang, USA Marina Emborg, USA J. Parent, USA Weian Zhao, USA Josef Fulka, Czech Republic Bruno Peault, USA Joel C. Glover, Norway Stefan Przyborski, UK Contents Stem Cells and Ion Channels, Stefan Liebau, -
Ion Channels
UC Davis UC Davis Previously Published Works Title THE CONCISE GUIDE TO PHARMACOLOGY 2019/20: Ion channels. Permalink https://escholarship.org/uc/item/1442g5hg Journal British journal of pharmacology, 176 Suppl 1(S1) ISSN 0007-1188 Authors Alexander, Stephen PH Mathie, Alistair Peters, John A et al. Publication Date 2019-12-01 DOI 10.1111/bph.14749 License https://creativecommons.org/licenses/by/4.0/ 4.0 Peer reviewed eScholarship.org Powered by the California Digital Library University of California S.P.H. Alexander et al. The Concise Guide to PHARMACOLOGY 2019/20: Ion channels. British Journal of Pharmacology (2019) 176, S142–S228 THE CONCISE GUIDE TO PHARMACOLOGY 2019/20: Ion channels Stephen PH Alexander1 , Alistair Mathie2 ,JohnAPeters3 , Emma L Veale2 , Jörg Striessnig4 , Eamonn Kelly5, Jane F Armstrong6 , Elena Faccenda6 ,SimonDHarding6 ,AdamJPawson6 , Joanna L Sharman6 , Christopher Southan6 , Jamie A Davies6 and CGTP Collaborators 1School of Life Sciences, University of Nottingham Medical School, Nottingham, NG7 2UH, UK 2Medway School of Pharmacy, The Universities of Greenwich and Kent at Medway, Anson Building, Central Avenue, Chatham Maritime, Chatham, Kent, ME4 4TB, UK 3Neuroscience Division, Medical Education Institute, Ninewells Hospital and Medical School, University of Dundee, Dundee, DD1 9SY, UK 4Pharmacology and Toxicology, Institute of Pharmacy, University of Innsbruck, A-6020 Innsbruck, Austria 5School of Physiology, Pharmacology and Neuroscience, University of Bristol, Bristol, BS8 1TD, UK 6Centre for Discovery Brain Science, University of Edinburgh, Edinburgh, EH8 9XD, UK Abstract The Concise Guide to PHARMACOLOGY 2019/20 is the fourth in this series of biennial publications. The Concise Guide provides concise overviews of the key properties of nearly 1800 human drug targets with an emphasis on selective pharmacology (where available), plus links to the open access knowledgebase source of drug targets and their ligands (www.guidetopharmacology.org), which provides more detailed views of target and ligand properties. -
Nicotinic Receptor Gene Variants Interact with Attention Deficient
Addictive Behaviors 38 (2013) 2683–2689 Contents lists available at ScienceDirect Addictive Behaviors Nicotinic receptor gene variants interact with attention deficient hyperactive disorder symptoms to predict smoking trajectories from early adolescence to adulthood Chien-Ti Lee a, Bernard F. Fuemmeler a,b,⁎, F. Joseph McClernon c,d, Allison Ashley-Koch e, Scott H. Kollins c a Duke University Medical Center, Department of Psychology Neuroscience, Durham, NC DUMC 104006, Durham, NC 27710, United States b Duke University, Department of Community and Family Medicine, Durham, NC DUMC 104006, Durham, NC 27710, United States c Duke University Medical Center, Department of Psychiatry and Behavioral Science, Durham, NC DUMC 3527, Durham, NC 27710, United States d Durham VAMC Mental Illness Research, Education, and Clinical Center, Durham, NC 508 Fulton Street, Durham, NC 27705, United States e Duke University Medical Center, Center for Human Genomics, DUMC Box 2903, Durham, NC 27710, United States HIGHLIGHTS • Associations between nAChR SNPs, ADHD symptoms, and smoking patterns were examined. • Growth modeling used to identify smoking patterns based on SNP and ADHD symptoms. • ADHD symptom severity predicted the number of cigarettes smoked. • Certain CHRNA6 variants predicted pattern of cigarette use over time. • CHRNB3 variant × ADHD symptom interaction increased risk of cigarette use over time. article info abstract Keywords: Objective: To examine the association of single nucleotide polymorphisms (SNPs) of the CHRNB3 nAChR SNPs (rs13280604) and CHRNA6 (rs892413) nicotinic acetylcholine receptor (nAChR) genes and symptoms of ADHD attention deficit hyperactivity disorder (ADHD) in predicting smoking patterns from early adolescence to Smoking development adulthood. Method: A longitudinal cohort of 1137 unrelated youths from the National Longitudinal Study of Adolescent Health provided responses to four surveys from Waves I to IV, and a genetic sample in Wave III. -
Replicated Risk Nicotinic Cholinergic Receptor Genes for Nicotine Dependence
G C A T T A C G G C A T genes Article Replicated Risk Nicotinic Cholinergic Receptor Genes for Nicotine Dependence Lingjun Zuo 1, Rolando Garcia-Milian 2, Xiaoyun Guo 1,3,4,*, Chunlong Zhong 5,*, Yunlong Tan 6, Zhiren Wang 6, Jijun Wang 3, Xiaoping Wang 7, Longli Kang 8, Lu Lu 9,10, Xiangning Chen 11,12, Chiang-Shan R. Li 1 and Xingguang Luo 1,6,* 1 Department of Psychiatry, Yale University School of Medicine, New Haven, CT 06510, USA; [email protected] (L.Z.); [email protected] (C.-S.R.L.) 2 Curriculum & Research Support Department, Cushing/Whitney Medical Library, Yale University School of Medicine, New Haven, CT 06510, USA; [email protected] 3 Shanghai Mental Health Center, Shanghai 200030, China; [email protected] 4 Department of Cellular and Molecular Physiology, Yale University School of Medicine, New Haven, CT 06510, USA 5 Department of Neurosurgery, Ren Ji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai 200127, China 6 Biological Psychiatry Research Center, Beijing Huilongguan Hospital, Beijing 100096, China; [email protected] (Y.T.); [email protected] (Z.W.) 7 Department of Neurology, Shanghai First People’s Hospital, Shanghai Jiao Tong University, Shanghai 200080, China; [email protected] 8 Key Laboratory for Molecular Genetic Mechanisms and Intervention Research on High Altitude Diseases of Tibet Autonomous Region, Xizang Minzu University School of Medicine, Xianyang, Shanxi 712082, China; [email protected] 9 Provincial Key Laboratory for Inflammation and Molecular Drug Target, Medical -
Nicotinic Receptors in Sleep-Related Hypermotor Epilepsy: Pathophysiology and Pharmacology
brain sciences Review Nicotinic Receptors in Sleep-Related Hypermotor Epilepsy: Pathophysiology and Pharmacology Andrea Becchetti 1,* , Laura Clara Grandi 1 , Giulia Colombo 1 , Simone Meneghini 1 and Alida Amadeo 2 1 Department of Biotechnology and Biosciences, University of Milano-Bicocca, 20126 Milano, Italy; [email protected] (L.C.G.); [email protected] (G.C.); [email protected] (S.M.) 2 Department of Biosciences, University of Milano, 20133 Milano, Italy; [email protected] * Correspondence: [email protected] Received: 13 October 2020; Accepted: 21 November 2020; Published: 25 November 2020 Abstract: Sleep-related hypermotor epilepsy (SHE) is characterized by hyperkinetic focal seizures, mainly arising in the neocortex during non-rapid eye movements (NREM) sleep. The familial form is autosomal dominant SHE (ADSHE), which can be caused by mutations in genes encoding subunits of the neuronal nicotinic acetylcholine receptor (nAChR), Na+-gated K+ channels, as well as non-channel signaling proteins, such as components of the gap activity toward rags 1 (GATOR1) macromolecular complex. The causative genes may have different roles in developing and mature brains. Under this respect, nicotinic receptors are paradigmatic, as different pathophysiological roles are exerted by distinct nAChR subunits in adult and developing brains. The widest evidence concerns α4 and β2 subunits. These participate in heteromeric nAChRs that are major modulators of excitability in mature neocortical circuits as well as regulate postnatal synaptogenesis. However, growing evidence implicates mutant α2 subunits in ADSHE, which poses interpretive difficulties as very little is known about the function of α2-containing (α2*) nAChRs in the human brain. -
CHRNA2 Antibody Cat
CHRNA2 Antibody Cat. No.: 56-130 CHRNA2 Antibody Specifications HOST SPECIES: Rabbit SPECIES REACTIVITY: Human This CHRNA2 antibody is generated from rabbits immunized with a KLH conjugated IMMUNOGEN: synthetic peptide between 42-69 amino acids from the N-terminal region of human CHRNA2. TESTED APPLICATIONS: WB APPLICATIONS: For WB starting dilution is: 1:1000 PREDICTED MOLECULAR 60 kDa WEIGHT: Properties This antibody is purified through a protein A column, followed by peptide affinity PURIFICATION: purification. CLONALITY: Polyclonal ISOTYPE: Rabbit Ig CONJUGATE: Unconjugated September 24, 2021 1 https://www.prosci-inc.com/chrna2-antibody-56-130.html PHYSICAL STATE: Liquid BUFFER: Supplied in PBS with 0.09% (W/V) sodium azide. CONCENTRATION: batch dependent Store at 4˚C for three months and -20˚C, stable for up to one year. As with all antibodies STORAGE CONDITIONS: care should be taken to avoid repeated freeze thaw cycles. Antibodies should not be exposed to prolonged high temperatures. Additional Info OFFICIAL SYMBOL: CHRNA2 ALTERNATE NAMES: Neuronal acetylcholine receptor subunit alpha-2, CHRNA2 ACCESSION NO.: Q15822 PROTEIN GI NO.: 308153405 GENE ID: 1135 USER NOTE: Optimal dilutions for each application to be determined by the researcher. Background and References Nicotinic acetylcholine receptors (nAChRs) are ligand-gated ion channels formed by a pentameric arrangement of alpha and beta subunits to create distinct muscle and neuronal receptors. Neuronal receptors are found throughout the peripheral and central nervous system where they are involved in fast synaptic transmission. This gene encodes an alpha subunit that is widely expressed in the brain. The proposed structure for nAChR BACKGROUND: subunits is a conserved N-terminal extracellular domain followed by three conserved transmembrane domains, a variable cytoplasmic loop, a fourth conserved transmembrane domain, and a short C-terminal extracellular region. -
Nicotinic Acetylcholine Receptor Variation and Response to Smoking Cessation Therapies Andrew W
94 Original article Nicotinic acetylcholine receptor variation and response to smoking cessation therapies Andrew W. Bergena, Harold S. Javitza, Ruth Krasnowa, Denise Nishitaa, Martha Michela, David V. Contib, Jinghua Liub, Won Leeb, Christopher K. Edlundb, Sharon Hallc, Pui-Yan Kwokd, Neal L. Benowitze, Timothy B. Bakerf, Rachel F. Tyndaleh, Caryn Lermang and Gary E. Swana Objective To evaluate the association of nicotinic and with increased abstinence in the NRT PG at 6MO acetylcholine receptor (nAChR) single nucleotide [for rs588765, 2.07 (1.11–3.87) and for rs1051730, 2.54 polymorphism (SNP) with 7-day point prevalence (1.29–4.99)]. We observed significant heterogeneity abstinence (abstinence) in randomized clinical trials in rs1051730 effects (F = 2.48, P = 0.021) between PGs. of smoking cessation therapies in individuals grouped Conclusion chr15q25.1 nAChR SNP risk alleles for by pharmacotherapy randomization to inform the smoking heaviness significantly increase relapse with PLA development of personalized smoking cessation therapy. treatment and significantly increase abstinence with NRT. Materials and methods We quantified association of four These SNP–PG associations require replication SNPs at three nAChRs with abstinence in eight randomized in independent samples for validation, and testing in larger clinical trials. Participants were 2633 outpatient treatment- sample sizes to evaluate whether similar effects occur in seeking, self-identified European ancestry individuals other PGs. Pharmacogenetics and Genomics 23:94–103 c -
(DPYSL2) with Schizophrenia in Japanese Subjects
Journal of Human Genetics (2010) 55, 469–472 & 2010 The Japan Society of Human Genetics All rights reserved 1434-5161/10 $32.00 www.nature.com/jhg SHORT COMMUNICATION A two-stage case–control association study of the dihydropyrimidinase-like 2 gene (DPYSL2) with schizophrenia in Japanese subjects Takayoshi Koide1,7, Branko Aleksic1,7, Yoshihito Ito1,7, Hinako Usui1, Akira Yoshimi2, Toshiya Inada3, Michio Suzuki4, Ryota Hashimoto5,7,8, Masatoshi Takeda5,8, Nakao Iwata6,7 and Norio Ozaki1,7 We examined the association of schizophrenia (SCZ) and dihydropyrimidinase-like 2 (DPYSL2), also known as collapsin response mediator protein 2, which regulates axonal growth and branching. We genotyped 20 tag single nucleotide polymorphisms (SNPs) in 1464 patients and 1310 controls. There were two potential associations in a screening population of 384 patients and 384 controls (rs2585458: P¼0.046, rs4733048: P¼0.014). However, we could not replicate these associations in a confirmatory population of 1080 patients and 926 controls (rs2585458: P¼0.39, rs4733048: P¼0.70) or a joint analysis (rs2585458: P¼0.72, rs4733048: P¼0.10). We conclude that DPYSL2 does not have a major function in SCZ in Japanese subjects. Journal of Human Genetics (2010) 55, 469–472; doi:10.1038/jhg.2010.38; published online 23 April 2010 Keywords: case–control study; DPYSL2; imputation; Japanese subjects; neuronal polarity; schizophrenia INTRODUCTION DPYSL2 is located on chromosome 8p21.2. This region has been Schizophrenia (SCZ) is a severe debilitating neuropsychiatric disorder reported as positive in meta-analysis of genome-wide linkage studies that affects B1% of the general population. -
The Functional Role of a Human Polymorphism (Rs2304297) in the 3'-UTR of the CHRNA6 Gene in Nicotine-Induced Locomotion and An
Submitter Name: Anjelica Cardenas Submitted email: [email protected] PI Name (if different): Shahrdad Lotfipour, PhD PI email (if different): [email protected] The Functional Role of a Human Polymorphism (rs2304297) in the 3’-UTR of the CHRNA6 Gene in Nicotine-Induced Locomotion and Anxiety in Adolescent Sprague Dawley Rats Anjelica Cardenas1, Yasamin Heydary1, Shahrdad Lotfipour1,2,3 1Pharmaceutical Sciences, University of California, Irvine; 2Emergency Medicine, University of California, Irvine, 3Pathology and Laboratory Medicine, University of California, Irvine A single nucleotide polymorphism (SNP), rs2304297, in the human 3’-untranslated region (UTR) of the alpha(α)6 nicotinic acetylcholine receptor (nAChR) subunit gene (CHRNA6), is associated with enhanced smoking during adolescence in humans. The α6 nAChR subunit exhibits peak expression during adolescence in dopaminergic neurons of the ventral tegmental area and substantia nigra in rodents. Studies using α6 genetic animal models and pharmacological approaches provide evidence that α6-containing (*) nAChRs mediate nicotine-induced locomotor activity, anxiety, and self-administration. To study the role of the human CHRNA6 3’-UTR SNP in vivo, our lab generated a humanized rodent line via CRISPR/Cas9 genomic engineering. Using our new genetic animal model, our current studies test the functional role of the SNP in adolescent locomotor response and anxiety-like behavior following acute and sub-chronic nicotine exposure. We hypothesize that the CHRNA6 SNP will interact with nicotine to enhance locomotion and anxiolytic behavior in male and female humanized 3’-UTR CHRNA6 rats. Our results illustrate sub-chronic, but not acute, nicotine exposure leads to genotype- and sex-dependent enhancement of locomotion. For anxiety-like behavior, we observe genotype-dependent effects for acute nicotine exposure and genotype- and sex-dependent effects for sub-chronic nicotine versus saline exposure.