Apicomplexan Cytoskeleton and Motors: Key Regulators in Morphogenesis, Cell Division, Transport and Motility
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Basal Body Structure and Composition in the Apicomplexans Toxoplasma and Plasmodium Maria E
Francia et al. Cilia (2016) 5:3 DOI 10.1186/s13630-016-0025-5 Cilia REVIEW Open Access Basal body structure and composition in the apicomplexans Toxoplasma and Plasmodium Maria E. Francia1* , Jean‑Francois Dubremetz2 and Naomi S. Morrissette3 Abstract The phylum Apicomplexa encompasses numerous important human and animal disease-causing parasites, includ‑ ing the Plasmodium species, and Toxoplasma gondii, causative agents of malaria and toxoplasmosis, respectively. Apicomplexans proliferate by asexual replication and can also undergo sexual recombination. Most life cycle stages of the parasite lack flagella; these structures only appear on male gametes. Although male gametes (microgametes) assemble a typical 9 2 axoneme, the structure of the templating basal body is poorly defined. Moreover, the rela‑ tionship between asexual+ stage centrioles and microgamete basal bodies remains unclear. While asexual stages of Plasmodium lack defined centriole structures, the asexual stages of Toxoplasma and closely related coccidian api‑ complexans contain centrioles that consist of nine singlet microtubules and a central tubule. There are relatively few ultra-structural images of Toxoplasma microgametes, which only develop in cat intestinal epithelium. Only a subset of these include sections through the basal body: to date, none have unambiguously captured organization of the basal body structure. Moreover, it is unclear whether this basal body is derived from pre-existing asexual stage centrioles or is synthesized de novo. Basal bodies in Plasmodium microgametes are thought to be synthesized de novo, and their assembly remains ill-defined. Apicomplexan genomes harbor genes encoding δ- and ε-tubulin homologs, potentially enabling these parasites to assemble a typical triplet basal body structure. -
Molecular Data and the Evolutionary History of Dinoflagellates by Juan Fernando Saldarriaga Echavarria Diplom, Ruprecht-Karls-Un
Molecular data and the evolutionary history of dinoflagellates by Juan Fernando Saldarriaga Echavarria Diplom, Ruprecht-Karls-Universitat Heidelberg, 1993 A THESIS SUBMITTED IN PARTIAL FULFILMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY in THE FACULTY OF GRADUATE STUDIES Department of Botany We accept this thesis as conforming to the required standard THE UNIVERSITY OF BRITISH COLUMBIA November 2003 © Juan Fernando Saldarriaga Echavarria, 2003 ABSTRACT New sequences of ribosomal and protein genes were combined with available morphological and paleontological data to produce a phylogenetic framework for dinoflagellates. The evolutionary history of some of the major morphological features of the group was then investigated in the light of that framework. Phylogenetic trees of dinoflagellates based on the small subunit ribosomal RNA gene (SSU) are generally poorly resolved but include many well- supported clades, and while combined analyses of SSU and LSU (large subunit ribosomal RNA) improve the support for several nodes, they are still generally unsatisfactory. Protein-gene based trees lack the degree of species representation necessary for meaningful in-group phylogenetic analyses, but do provide important insights to the phylogenetic position of dinoflagellates as a whole and on the identity of their close relatives. Molecular data agree with paleontology in suggesting an early evolutionary radiation of the group, but whereas paleontological data include only taxa with fossilizable cysts, the new data examined here establish that this radiation event included all dinokaryotic lineages, including athecate forms. Plastids were lost and replaced many times in dinoflagellates, a situation entirely unique for this group. Histones could well have been lost earlier in the lineage than previously assumed. -
Plasmodium Evasion of Mosquito Immunity and Global Malaria Transmission: the Lock-And-Key Theory
Plasmodium evasion of mosquito immunity and global malaria transmission: The lock-and-key theory Alvaro Molina-Cruz1,2, Gaspar E. Canepa1, Nitin Kamath, Noelle V. Pavlovic, Jianbing Mu, Urvashi N. Ramphul, Jose Luis Ramirez, and Carolina Barillas-Mury2 Laboratory of Malaria and Vector Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Rockville, MD 20852 Contributed by Carolina Barillas-Mury, October 15, 2015 (sent for review September 19, 2015; reviewed by Serap Aksoy and Daniel L. Hartl) Plasmodium falciparum malaria originated in Africa and became for the parasite to evade mosquito immunity. The implications global as humans migrated to other continents. During this jour- of P. falciparum selection by mosquitoes for global malaria ney, parasites encountered new mosquito species, some of them transmission are discussed. evolutionarily distant from African vectors. We have previously shown that the Pfs47 protein allows the parasite to evade the mos- Results quito immune system of Anopheles gambiae mosquitoes. Here, we Differences in Compatibility Between P. falciparum Isolates from investigated the role of Pfs47-mediated immune evasion in the Diverse Geographic Origin and Different Anopheline Species. The adaptation of P. falciparum to evolutionarily distant mosquito species. compatibility between P. falciparum isolates from different continents We found that P. falciparum isolates from Africa, Asia, or the Americas and mosquito vectors that are geographically and evolutionarily have low compatibility to malaria vectors from a different continent, distant was investigated by simultaneously infecting major malaria an effect that is mediated by the mosquito immune system. We iden- vectors from Africa (A. gambiae), Southeast Asia (Anopheles dirus), tified 42 different haplotypes of Pfs47 that have a strong geographic and the New World (A. -
Comparison of the Plasmodium Species Which Cause Human Malaria
Comparison of the Plasmodium Species Which Cause Human Malaria Plasmodium Stages found Appearance of Erythrocyte species in blood (RBC) Appearance of Parasite normal; multiple infection of RBC more delicate cytoplasm; 1-2 small chromatin Ring common than in other species dots; occasional appliqué (accollé) forms normal; rarely, Maurer’s clefts seldom seen in peripheral blood; compact Trophozoite (under certain staining conditions) cytoplasm; dark pigment seldom seen in peripheral blood; mature Schizont normal; rarely, Maurer’s clefts = 8-24 small merozoites; dark pigment, (under certain staining conditions) clumped in one mass P.falciparum crescent or sausage shape; chromatin in a Gametocyte distorted by parasite single mass (macrogametocyte) or diffuse (microgametocyte); dark pigment mass normal to 1-1/4 X,round; occasionally fine Ring Schüffner’s dots; multiple infection of RBC large cytoplasm with occasional not uncommon pseudopods; large chromatin dot enlarged 1-1/2–2 X;may be distorted; fine large ameboid cytoplasm; large chromatin; Trophozoite Schüffner’s dots fine, yellowish-brown pigment enlarged 1-1/2–2 X;may be distorted; fine large, may almost fill RBC; mature = 12-24 Schizont Schüffner’s dots merozoites; yellowish-brown, coalesced P.vivax pigment round to oval; compact; may almost fill enlarged 1-1/2–2 X;may be distorted; fine RBC; chromatin compact, eccentric Gametocyte Schüffner’s dots (macrogametocyte) or diffuse (micro- gametocyte); scattered brown pigment normal to 1-1/4 X,round to oval; occasionally Ring Schüffner’s dots; -
Research Toward Vaccines Against Malaria
© 1998 Nature Publishing Group http://www.nature.com/naturemedicine REVIEW Louis Miller (National Institute of Allergy and Infectious Diseases) and Stephen Hoffman (Naval Medical Research Institute) review progress toward developing malaria vaccines. They argue that multiple antigens from different stages may be needed to protect the diverse populations at risk, and that an optimal vaccine would Induce Immunity against all stages. Vaccines for African children, In whom the major mortality occurs, must induce immunity against ase,cual blood stages. Research toward vaccines against malaria Malaria is one of the major causes of the only stage of the life cycle that causes disease and death between the Tropic LOUIS H. MILLER1 disease. The stages before the asexual of Cancer and Tropic of Capricorn. & STEPHEN L. HOFFMAN2 blood stage are lumped together and Plasmodium falciparum has an especially called pre-erythrocytic. A small propor profound impact on infants and children in sub-Saharan Africa, tion of the asexual blood stages differentiate into sexual stages, where its effect on health is increasing as chloroquine resistance the gametocytes in red cells that infect mosquitoes; vaccines to spreads across the continent. We believe that vaccination the mosquito stages are called transmission-blocking vaccines. against P. falciparum is the intervention with the greatest poten The parasites' multistage life cycle and the fact that immune re tial to reduce malaria-associated severe morbidity and mortality sponses that recognize one stage often do not affect the next in areas with the most intense transmission and that it may do stage have made vaccine development for malaria more diffi so without necessarily preventing blood stage infection. -
Identification of a Novel Fused Gene Family Implicates Convergent
Chen et al. BMC Genomics (2018) 19:306 https://doi.org/10.1186/s12864-018-4685-y RESEARCH ARTICLE Open Access Identification of a novel fused gene family implicates convergent evolution in eukaryotic calcium signaling Fei Chen1,2,3, Liangsheng Zhang1, Zhenguo Lin4 and Zong-Ming Max Cheng2,3* Abstract Background: Both calcium signals and protein phosphorylation responses are universal signals in eukaryotic cell signaling. Currently three pathways have been characterized in different eukaryotes converting the Ca2+ signals to the protein phosphorylation responses. All these pathways have based mostly on studies in plants and animals. Results: Based on the exploration of genomes and transcriptomes from all the six eukaryotic supergroups, we report here in Metakinetoplastina protists a novel gene family. This family, with a proposed name SCAMK,comprisesSnRK3 fused calmodulin-like III kinase genes and was likely evolved through the insertion of a calmodulin-like3 gene into an SnRK3 gene by unequal crossover of homologous chromosomes in meiosis cell. Its origin dated back to the time intersection at least 450 million-year-ago when Excavata parasites, Vertebrata hosts, and Insecta vectors evolved. We also analyzed SCAMK’s unique expression pattern and structure, and proposed it as one of the leading calcium signal conversion pathways in Excavata parasite. These characters made SCAMK gene as a potential drug target for treating human African trypanosomiasis. Conclusions: This report identified a novel gene fusion and dated its precise fusion time -
The Planktonic Protist Interactome: Where Do We Stand After a Century of Research?
bioRxiv preprint doi: https://doi.org/10.1101/587352; this version posted May 2, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Bjorbækmo et al., 23.03.2019 – preprint copy - BioRxiv The planktonic protist interactome: where do we stand after a century of research? Marit F. Markussen Bjorbækmo1*, Andreas Evenstad1* and Line Lieblein Røsæg1*, Anders K. Krabberød1**, and Ramiro Logares2,1** 1 University of Oslo, Department of Biosciences, Section for Genetics and Evolutionary Biology (Evogene), Blindernv. 31, N- 0316 Oslo, Norway 2 Institut de Ciències del Mar (CSIC), Passeig Marítim de la Barceloneta, 37-49, ES-08003, Barcelona, Catalonia, Spain * The three authors contributed equally ** Corresponding authors: Ramiro Logares: Institute of Marine Sciences (ICM-CSIC), Passeig Marítim de la Barceloneta 37-49, 08003, Barcelona, Catalonia, Spain. Phone: 34-93-2309500; Fax: 34-93-2309555. [email protected] Anders K. Krabberød: University of Oslo, Department of Biosciences, Section for Genetics and Evolutionary Biology (Evogene), Blindernv. 31, N-0316 Oslo, Norway. Phone +47 22845986, Fax: +47 22854726. [email protected] Abstract Microbial interactions are crucial for Earth ecosystem function, yet our knowledge about them is limited and has so far mainly existed as scattered records. Here, we have surveyed the literature involving planktonic protist interactions and gathered the information in a manually curated Protist Interaction DAtabase (PIDA). In total, we have registered ~2,500 ecological interactions from ~500 publications, spanning the last 150 years. -
Download the Abstract Book
1 Exploring the male-induced female reproduction of Schistosoma mansoni in a novel medium Jipeng Wang1, Rui Chen1, James Collins1 1) UT Southwestern Medical Center. Schistosomiasis is a neglected tropical disease caused by schistosome parasites that infect over 200 million people. The prodigious egg output of these parasites is the sole driver of pathology due to infection. Female schistosomes rely on continuous pairing with male worms to fuel the maturation of their reproductive organs, yet our understanding of their sexual reproduction is limited because egg production is not sustained for more than a few days in vitro. Here, we explore the process of male-stimulated female maturation in our newly developed ABC169 medium and demonstrate that physical contact with a male worm, and not insemination, is sufficient to induce female development and the production of viable parthenogenetic haploid embryos. By performing an RNAi screen for genes whose expression was enriched in the female reproductive organs, we identify a single nuclear hormone receptor that is required for differentiation and maturation of germ line stem cells in female gonad. Furthermore, we screen genes in non-reproductive tissues that maybe involved in mediating cell signaling during the male-female interplay and identify a transcription factor gli1 whose knockdown prevents male worms from inducing the female sexual maturation while having no effect on male:female pairing. Using RNA-seq, we characterize the gene expression changes of male worms after gli1 knockdown as well as the female transcriptomic changes after pairing with gli1-knockdown males. We are currently exploring the downstream genes of this transcription factor that may mediate the male stimulus associated with pairing. -
Essential Function of the Alveolin Network in the Subpellicular
RESEARCH ARTICLE Essential function of the alveolin network in the subpellicular microtubules and conoid assembly in Toxoplasma gondii Nicolo` Tosetti1, Nicolas Dos Santos Pacheco1, Eloı¨se Bertiaux2, Bohumil Maco1, Lore` ne Bournonville2, Virginie Hamel2, Paul Guichard2, Dominique Soldati-Favre1* 1Department of Microbiology and Molecular Medicine, Faculty of Medicine, University of Geneva, Geneva, Switzerland; 2Department of Cell Biology, Sciences III, University of Geneva, Geneva, Switzerland Abstract The coccidian subgroup of Apicomplexa possesses an apical complex harboring a conoid, made of unique tubulin polymer fibers. This enigmatic organelle extrudes in extracellular invasive parasites and is associated to the apical polar ring (APR). The APR serves as microtubule- organizing center for the 22 subpellicular microtubules (SPMTs) that are linked to a patchwork of flattened vesicles, via an intricate network composed of alveolins. Here, we capitalize on ultrastructure expansion microscopy (U-ExM) to localize the Toxoplasma gondii Apical Cap protein 9 (AC9) and its partner AC10, identified by BioID, to the alveolin network and intercalated between the SPMTs. Parasites conditionally depleted in AC9 or AC10 replicate normally but are defective in microneme secretion and fail to invade and egress from infected cells. Electron microscopy revealed that the mature parasite mutants are conoidless, while U-ExM highlighted the disorganization of the SPMTs which likely results in the catastrophic loss of APR and conoid. Introduction *For correspondence: Toxoplasma gondii belongs to the phylum of Apicomplexa that groups numerous parasitic protozo- Dominique.Soldati-Favre@unige. ans causing severe diseases in humans and animals. As part of the superphylum of Alveolata, the ch Apicomplexa are characterized by the presence of the alveoli, which consist in small flattened single- membrane sacs, underlying the plasma membrane (PM) to form the inner membrane complex (IMC) Competing interest: See of the parasite. -
Unexpected Fold in the Circumsporozoite Protein Target of Malaria Vaccines
Unexpected fold in the circumsporozoite protein target of malaria vaccines Michael B. Doud, Adem C. Koksal, Li-Zhi Mi, Gaojie Song, Chafen Lu, and Timothy A. Springer1 Immune Disease Institute, Children’s Hospital Boston and Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115 Contributed by Timothy A. Springer, April 4, 2012 (sent for review March 19, 2012) Circumsporozoite (CS) protein is the major surface component of Plas- The CS structures reveal a unique “αTSR” domain that is modium falciparum sporozoites and is essential for host cell invasion. related to TSR domains yet has unique features (Figs. 1 C and D A vaccine containing tandem repeats, region III, and thrombospondin and 2). Region III forms an integral part of the fold as a unique type-I repeat (TSR) of CS is efficacious in phase III trials but gives only amphipathic α-helix running orthogonally to the classic three- a 35% reduction in severe malaria in the first year postimmunization. stranded TSR homology region. This α1-helix, together with We solved crystal structures showing that region III and TSR fold into a “CS flap” (Fig. 1 C and D), decorates one face of the TSR asingleunit,an“αTSR” domain. The αTSR domain possesses a hydro- β-sheet (Fig. 2A). By packing against the β-sheet, the region III phobic pocket and core, missing in TSR domains. CS binds heparin, but α-helix gives the αTSR domain a hydrophobic core lacking in αTSR does not. Interestingly, polymorphic T-cell epitopes map to spe- TSR domains. A short linker containing a conserved hydro- cialized αTSR regions. -
Predatory Flagellates – the New Recently Discovered Deep Branches of the Eukaryotic Tree and Their Evolutionary and Ecological Significance
Protistology 14 (1), 15–22 (2020) Protistology Predatory flagellates – the new recently discovered deep branches of the eukaryotic tree and their evolutionary and ecological significance Denis V. Tikhonenkov Papanin Institute for Biology of Inland Waters, Russian Academy of Sciences, Borok, 152742, Russia | Submitted March 20, 2020 | Accepted April 6, 2020 | Summary Predatory protists are poorly studied, although they are often representing important deep-branching evolutionary lineages and new eukaryotic supergroups. This short review/opinion paper is inspired by the recent discoveries of various predatory flagellates, which form sister groups of the giant eukaryotic clusters on phylogenetic trees, and illustrate an ancestral state of one or another supergroup of eukaryotes. Here we discuss their evolutionary and ecological relevance and show that the study of such protists may be essential in addressing previously puzzling evolutionary problems, such as the origin of multicellular animals, the plastid spread trajectory, origins of photosynthesis and parasitism, evolution of mitochondrial genomes. Key words: evolution of eukaryotes, heterotrophic flagellates, mitochondrial genome, origin of animals, photosynthesis, predatory protists, tree of life Predatory flagellates and diversity of eu- of the hidden diversity of protists (Moon-van der karyotes Staay et al., 2000; López-García et al., 2001; Edg- comb et al., 2002; Massana et al., 2004; Richards The well-studied multicellular animals, plants and Bass, 2005; Tarbe et al., 2011; de Vargas et al., and fungi immediately come to mind when we hear 2015). In particular, several prevailing and very abun- the term “eukaryotes”. However, these groups of dant ribogroups such as MALV, MAST, MAOP, organisms represent a minority in the real diversity MAFO (marine alveolates, stramenopiles, opistho- of evolutionary lineages of eukaryotes. -
Vaccination with Recombinant Microneme Proteins Confers Protection Against Experimental Toxoplasmosis in Mice
RESEARCH ARTICLE Vaccination with Recombinant Microneme Proteins Confers Protection against Experimental Toxoplasmosis in Mice Camila Figueiredo Pinzan1, Aline Sardinha-Silva1, Fausto Almeida1, Livia Lai2, Carla Duque Lopes1, Elaine Vicente Lourenço3, Ademilson Panunto-Castelo4, Stephen Matthews2, Maria Cristina Roque-Barreira1* 1 Department of Cell and Molecular Biology, Ribeirão Preto Medical School, University of São Paulo, Ribeirão Preto, São Paulo, Brazil, 2 Division of Molecular Biosciences, Imperial College London, South Kensington Campus, London, SW7 2AZ, United Kingdom, 3 Department of Medicine, Division of Rheumatology, University of California Los Angeles, Los Angeles, California, 90095–1670, United States of America, 4 Department of Biology, School of Philosophy, Sciences and Literature of Ribeirão Preto, University of Sao Paulo, Ribeirão Preto, São Paulo, Brazil * [email protected] OPEN ACCESS Abstract Citation: Pinzan CF, Sardinha-Silva A, Almeida F, Lai L, Lopes CD, Lourenço EV, et al. (2015) Vaccination Toxoplasmosis, a zoonotic disease caused by Toxoplasma gondii, is an important public with Recombinant Microneme Proteins Confers health problem and veterinary concern. Although there is no vaccine for human toxoplas- Protection against Experimental Toxoplasmosis in mosis, many attempts have been made to develop one. Promising vaccine candidates uti- Mice. PLoS ONE 10(11): e0143087. doi:10.1371/ journal.pone.0143087 lize proteins, or their genes, from microneme organelle of T. gondii that are involved in the initial stages of host cell invasion by the parasite. In the present study, we used different Editor: Takafumi Tsuboi, Ehime University, JAPAN recombinant microneme proteins (TgMIC1, TgMIC4, or TgMIC6) or combinations of these Received: June 17, 2015 proteins (TgMIC1-4 and TgMIC1-4-6) to evaluate the immune response and protection Accepted: October 4, 2015 against experimental toxoplasmosis in C57BL/6 mice.