Redalyc.Hongos Clavarioides (Agaricomycetes) De Tabasco
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A Checklist of Clavarioid Fungi (Agaricomycetes) Recorded in Brazil
A checklist of clavarioid fungi (Agaricomycetes) recorded in Brazil ANGELINA DE MEIRAS-OTTONI*, LIDIA SILVA ARAUJO-NETA & TATIANA BAPTISTA GIBERTONI Departamento de Micologia, Universidade Federal de Pernambuco, Av. Nelson Chaves s/n, Recife 50670-420 Brazil *CORRESPONDENCE TO: [email protected] ABSTRACT — Based on an intensive search of literature about clavarioid fungi (Agaricomycetes: Basidiomycota) in Brazil and revision of material deposited in Herbaria PACA and URM, a list of 195 taxa was compiled. These are distributed into six orders (Agaricales, Cantharellales, Gomphales, Hymenochaetales, Polyporales and Russulales) and 12 families (Aphelariaceae, Auriscalpiaceae, Clavariaceae, Clavulinaceae, Gomphaceae, Hymenochaetaceae, Lachnocladiaceae, Lentariaceae, Lepidostromataceae, Physalacriaceae, Pterulaceae, and Typhulaceae). Among the 22 Brazilian states with occurrence of clavarioid fungi, Rio Grande do Sul, Paraná and Amazonas have the higher number of species, but most of them are represented by a single record, which reinforces the need of more inventories and taxonomic studies about the group. KEY WORDS — diversity, taxonomy, tropical forest Introduction The clavarioid fungi are a polyphyletic group, characterized by coralloid, simple or branched basidiomata, with variable color and consistency. They include 30 genera with about 800 species, distributed in Agaricales, Cantharellales, Gomphales, Hymenochaetales, Polyporales and Russulales (Corner 1970; Petersen 1988; Kirk et al. 2008). These fungi are usually humicolous or lignicolous, but some can be symbionts – ectomycorrhizal, lichens or pathogens, being found in temperate, subtropical and tropical forests (Corner 1950, 1970; Petersen 1988; Nelsen et al. 2007; Henkel et al. 2012). Some species are edible, while some are poisonous (Toledo & Petersen 1989; Henkel et al. 2005, 2011). Studies about clavarioid fungi in Brazil are still scarce (Fidalgo & Fidalgo 1970; Rick 1959; De Lamônica-Freire 1979; Sulzbacher et al. -
Re-Thinking the Classification of Corticioid Fungi
mycological research 111 (2007) 1040–1063 journal homepage: www.elsevier.com/locate/mycres Re-thinking the classification of corticioid fungi Karl-Henrik LARSSON Go¨teborg University, Department of Plant and Environmental Sciences, Box 461, SE 405 30 Go¨teborg, Sweden article info abstract Article history: Corticioid fungi are basidiomycetes with effused basidiomata, a smooth, merulioid or Received 30 November 2005 hydnoid hymenophore, and holobasidia. These fungi used to be classified as a single Received in revised form family, Corticiaceae, but molecular phylogenetic analyses have shown that corticioid fungi 29 June 2007 are distributed among all major clades within Agaricomycetes. There is a relative consensus Accepted 7 August 2007 concerning the higher order classification of basidiomycetes down to order. This paper Published online 16 August 2007 presents a phylogenetic classification for corticioid fungi at the family level. Fifty putative Corresponding Editor: families were identified from published phylogenies and preliminary analyses of unpub- Scott LaGreca lished sequence data. A dataset with 178 terminal taxa was compiled and subjected to phy- logenetic analyses using MP and Bayesian inference. From the analyses, 41 strongly Keywords: supported and three unsupported clades were identified. These clades are treated as fam- Agaricomycetes ilies in a Linnean hierarchical classification and each family is briefly described. Three ad- Basidiomycota ditional families not covered by the phylogenetic analyses are also included in the Molecular systematics classification. All accepted corticioid genera are either referred to one of the families or Phylogeny listed as incertae sedis. Taxonomy ª 2007 The British Mycological Society. Published by Elsevier Ltd. All rights reserved. Introduction develop a downward-facing basidioma. -
Fungal Allergy and Pathogenicity 20130415 112934.Pdf
Fungal Allergy and Pathogenicity Chemical Immunology Vol. 81 Series Editors Luciano Adorini, Milan Ken-ichi Arai, Tokyo Claudia Berek, Berlin Anne-Marie Schmitt-Verhulst, Marseille Basel · Freiburg · Paris · London · New York · New Delhi · Bangkok · Singapore · Tokyo · Sydney Fungal Allergy and Pathogenicity Volume Editors Michael Breitenbach, Salzburg Reto Crameri, Davos Samuel B. Lehrer, New Orleans, La. 48 figures, 11 in color and 22 tables, 2002 Basel · Freiburg · Paris · London · New York · New Delhi · Bangkok · Singapore · Tokyo · Sydney Chemical Immunology Formerly published as ‘Progress in Allergy’ (Founded 1939) Edited by Paul Kallos 1939–1988, Byron H. Waksman 1962–2002 Michael Breitenbach Professor, Department of Genetics and General Biology, University of Salzburg, Salzburg Reto Crameri Professor, Swiss Institute of Allergy and Asthma Research (SIAF), Davos Samuel B. Lehrer Professor, Clinical Immunology and Allergy, Tulane University School of Medicine, New Orleans, LA Bibliographic Indices. This publication is listed in bibliographic services, including Current Contents® and Index Medicus. Drug Dosage. The authors and the publisher have exerted every effort to ensure that drug selection and dosage set forth in this text are in accord with current recommendations and practice at the time of publication. However, in view of ongoing research, changes in government regulations, and the constant flow of information relating to drug therapy and drug reactions, the reader is urged to check the package insert for each drug for any change in indications and dosage and for added warnings and precautions. This is particularly important when the recommended agent is a new and/or infrequently employed drug. All rights reserved. No part of this publication may be translated into other languages, reproduced or utilized in any form or by any means electronic or mechanical, including photocopying, recording, microcopy- ing, or by any information storage and retrieval system, without permission in writing from the publisher. -
Systematics of the Genus Ramaria Inferred from Nuclear Large Subunit And
AN ABSTRACT OF THE THESIS OF Andrea J. Humpert for the degree of Master of Science in Botany and Plant Pathology presented on November 11, 1999. Title: Systematics of the Genus Ramaria Inferred from Nuclear Large Subunit and Mitochondrial Small Subunit Ribosomal DNA Sequences. Abstract approved: Redacted for Privacy Joseph W. Spatafora Ramaria is a genus of epigeous fungi common to the coniferous forests of the Pacific Northwest of North America. The extensively branched basidiocarps and the positive chemical reaction of the context in ferric sulfate are distinguishing characteristics of the genus. The genus is estimated to contain between 200-300 species and is divided into four subgenera, i.) R. subgenus Ramaria, ii.) R. subgenus Laeticolora, iii.) R. subgenus Lentoramaria and iv.) R. subgenus Echinoramaria, according to macroscopic, microscopic and macrochemical characters. The systematics of Ramaria is problematic and confounded by intraspecific and possibly ontogenetic variation in several morphological traits. To test generic and intrageneric taxonomic classifications, two gene regions were sequenced and subjected to maximum parsimony analyses. The nuclear large subunit ribosomal DNA (nuc LSU rDNA) was used to test and refine generic, subgeneric and selected species concepts of Ramaria and the mitochondrial small subunit ribosomal DNA (mt SSU rDNA) was used as an independent locus to test the monophyly of Ramaria. Cladistic analyses of both loci indicated that Ramaria is paraphyletic due to several non-ramarioid taxa nested within the genus including Clavariadelphus, Gautieria, Gomphus and Kavinia. In the nuc LSU rDNA analyses, R. subgenus Ramaria species formed a monophyletic Glade and were indicated for the first time to be a sister group to Gautieria. -
New Data on Aphyllophoroid Fungi (Basidiomycota) in Forest-Steppe Introduction Communities of the Lipetsk Region, European Russia
Acta Mycologica DOI: 10.5586/am.1112 ORIGINAL RESEARCH PAPER Publication history Received: 2018-06-05 Accepted: 2018-09-30 New data on aphyllophoroid fungi Published: 2018-12-28 (Basidiomycota) in forest-steppe Handling editor Anna Kujawa, Institute for Agricultural and Forest communities of the Lipetsk region, Environment, Polish Academy of Sciences, Poland European Russia Authors’ contributions SV designed the research, 1 2 1 collected and identifed the Sergey Volobuev *, Alexandra Arzhenenko , Sergey Bolshakov , material; AA collected and Nataliya Shakhova3, Lyudmila Sarycheva4 identifed the material; SB 1 Laboratory of Systematics and Geography of Fungi, Komarov Botanical Institute, Russian identifed the material; NS and Academy of Sciences, Professor Popov Str. 2, St. Petersburg 197376, Russia LS collected the material; all 2 Botany Chair, Biological Department, Saint Petersburg State University, Universitetskaya authors contributed to the Embankment 7–9 Str., Petersburg 199034, Russia manuscript preparation 3 Laboratory of Biochemistry of Fungi, Komarov Botanical Institute, Russian Academy of Sciences, Professor Popov Str. 2, St. Petersburg 197376, Russia Funding 4 Laboratory of Mycology, Galichya Gora Nature Reserve, Voronezh State University, Donskoye The work was supported by the village, Zadonsky District, Lipetsk region 399240, Russia program of basic research of the Russian Academy of Sciences, * Corresponding author. Email: [email protected] project “Biological diversity and dynamics of the fora and vegetation of Russia”, using equipment of the Core Facility Abstract Center of the Komarov Botanical Te data on 150 species of aphyllophoroid fungi from the Lipetsk region, Central Institute “Cell and Molecular Russian Upland, European Russia, are presented. Te annotated species list based Technologies in Plant Science”. -
Phylogenetic Relationships of the Gomphales Based on Nuc-25S-Rdna, Mit-12S-Rdna, and Mit-Atp6-DNA Combined Sequences
fungal biology 114 (2010) 224–234 journal homepage: www.elsevier.com/locate/funbio Phylogenetic relationships of the Gomphales based on nuc-25S-rDNA, mit-12S-rDNA, and mit-atp6-DNA combined sequences Admir J. GIACHINIa,*, Kentaro HOSAKAb, Eduardo NOUHRAc, Joseph SPATAFORAd, James M. TRAPPEa aDepartment of Forest Ecosystems and Society, Oregon State University, Corvallis, OR 97331-5752, USA bDepartment of Botany, National Museum of Nature and Science (TNS), Tsukuba-shi, Ibaraki 305-0005, Japan cIMBIV/Universidad Nacional de Cordoba, Av. Velez Sarfield 299, cc 495, 5000 Co´rdoba, Argentina dDepartment of Botany and Plant Pathology, Oregon State University, Corvallis, OR 97331, USA article info abstract Article history: Phylogenetic relationships among Geastrales, Gomphales, Hysterangiales, and Phallales Received 16 September 2009 were estimated via combined sequences: nuclear large subunit ribosomal DNA (nuc-25S- Accepted 11 January 2010 rDNA), mitochondrial small subunit ribosomal DNA (mit-12S-rDNA), and mitochondrial Available online 28 January 2010 atp6 DNA (mit-atp6-DNA). Eighty-one taxa comprising 19 genera and 58 species were inves- Corresponding Editor: G.M. Gadd tigated, including members of the Clathraceae, Gautieriaceae, Geastraceae, Gomphaceae, Hysterangiaceae, Phallaceae, Protophallaceae, and Sphaerobolaceae. Although some nodes Keywords: deep in the tree could not be fully resolved, some well-supported lineages were recovered, atp6 and the interrelationships among Gloeocantharellus, Gomphus, Phaeoclavulina, and Turbinel- Gomphales lus, and the placement of Ramaria are better understood. Both Gomphus sensu lato and Rama- Homobasidiomycetes ria sensu lato comprise paraphyletic lineages within the Gomphaceae. Relationships of the rDNA subgenera of Ramaria sensu lato to each other and to other members of the Gomphales were Systematics clarified. -
Notes, Outline and Divergence Times of Basidiomycota
Fungal Diversity (2019) 99:105–367 https://doi.org/10.1007/s13225-019-00435-4 (0123456789().,-volV)(0123456789().,- volV) Notes, outline and divergence times of Basidiomycota 1,2,3 1,4 3 5 5 Mao-Qiang He • Rui-Lin Zhao • Kevin D. Hyde • Dominik Begerow • Martin Kemler • 6 7 8,9 10 11 Andrey Yurkov • Eric H. C. McKenzie • Olivier Raspe´ • Makoto Kakishima • Santiago Sa´nchez-Ramı´rez • 12 13 14 15 16 Else C. Vellinga • Roy Halling • Viktor Papp • Ivan V. Zmitrovich • Bart Buyck • 8,9 3 17 18 1 Damien Ertz • Nalin N. Wijayawardene • Bao-Kai Cui • Nathan Schoutteten • Xin-Zhan Liu • 19 1 1,3 1 1 1 Tai-Hui Li • Yi-Jian Yao • Xin-Yu Zhu • An-Qi Liu • Guo-Jie Li • Ming-Zhe Zhang • 1 1 20 21,22 23 Zhi-Lin Ling • Bin Cao • Vladimı´r Antonı´n • Teun Boekhout • Bianca Denise Barbosa da Silva • 18 24 25 26 27 Eske De Crop • Cony Decock • Ba´lint Dima • Arun Kumar Dutta • Jack W. Fell • 28 29 30 31 Jo´ zsef Geml • Masoomeh Ghobad-Nejhad • Admir J. Giachini • Tatiana B. Gibertoni • 32 33,34 17 35 Sergio P. Gorjo´ n • Danny Haelewaters • Shuang-Hui He • Brendan P. Hodkinson • 36 37 38 39 40,41 Egon Horak • Tamotsu Hoshino • Alfredo Justo • Young Woon Lim • Nelson Menolli Jr. • 42 43,44 45 46 47 Armin Mesˇic´ • Jean-Marc Moncalvo • Gregory M. Mueller • La´szlo´ G. Nagy • R. Henrik Nilsson • 48 48 49 2 Machiel Noordeloos • Jorinde Nuytinck • Takamichi Orihara • Cheewangkoon Ratchadawan • 50,51 52 53 Mario Rajchenberg • Alexandre G. -
New Macrofungi Records from Turkey and Macrofungal Diversity of Pozantı-Adana
Turkish Journal of Botany Turk J Bot (2016) 40: 209-217 http://journals.tubitak.gov.tr/botany/ © TÜBİTAK Research Article doi:10.3906/bot-1501-22 New macrofungi records from Turkey and macrofungal diversity of Pozantı-Adana 1, 2 Hasan Hüseyin DOĞAN *, Fevzi KURT 1 Department of Biology, Faculty of Science, Selçuk University, Konya, Turkey 2 Ayhan Şahenk Technical and Vocational High School, Eyyubiye, Şanlıurfa, Turkey Received: 12.01.2015 Accepted/Published Online: 08.07.2015 Final Version: 09.02.2016 Abstract: The present study reports on macrofungi species collected from 2003 to 2012 in Pozantı. In the field and during laboratory studies, 157 taxa belonging to 2 divisions and 51 families were identified. Among them, 8 families and 12 taxa belong to Ascomycota, and 43 families and 145 taxa belong to Basidiomycota. Moreover, 10 taxa—Dumontinia tuberosa, Lycoperdon lambinonii, Conocybe mesospora, Pholiotina striipes, Hebeloma sordidum, Antrodia ramentacea, Leucogyrophana romellii, Diplomitoporus flavescens, Alutaceodontia alutacea, and Tulasnella violea—were found in the Turkish mycobiota for the first time. Key words: Pozantı, macrofungi, new records, Turkey 1. Introduction 2. Materials and methods Despite the high level of macrofungal diversity, the first The Pozantı district is located in the Central Taurus fungal systematic studies were started in the 1930s and Mountains at the intersection of the roads that connect the focused on only wood-rotting fungi in Turkey (Doğan et Mediterranean and Central Anatolia regions (37°25′39″N, al., 2005). After the 1980s, researchers were more focused 34°52′16″E). The research area is surrounded by Karaisalı and Aladağ to the east, Ulukışla to the west, Tarsus to the on regional fungal diversity studies and started to get more south, and Çamardı to the north (Figure 1). -
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AN ABSTRACT OF THE DISSERTATIONOF Kentaro Hosaka for the degree of Doctor ofPhilosophy in Botany and Plant Pathology presented on October 26, 2005. Title: Systematics, Phylogeny, andBiogeography of the Hysterangiales and Related Taxa (Phallomycetidae, Homobasidiomycetes). Abstract approved: Redacted for Privacy Monophyly of the gomphoid-phalloid dadewas confirmed based on multigene phylogenetic analyses. Four major subclades(Hysterangiales, Geastrales, Gomphales and Phallales) were also demonstratedto be monophyletic. The interrelationships among the subclades were, however, not resolved, andalternative topologies could not be rejected statistically. Nonetheless,most analyses showed that the Hysterangiales and Phallales do not forma monophyletic group, which is in contrast to traditional taxonomy. The higher-level phylogeny of thegomphoid-phalloid fungi tends to suggest that the Gomphales form a sister group with either the Hysterangialesor Phallales. Unweighted parsimonycharacter state reconstruction favorsthe independent gain of the ballistosporic mechanism in the Gomphales, but the alternativescenario of multiple losses of ballistospoiy could not be rejected statistically underlikelihood- based reconstructions. This latterhypothesis is consistent with thewidely accepted hypothesis that the loss of ballistosporyis irreversible. The transformationof fruiting body forms from nongastroid to gastroidwas apparent in the lineage leading to Gautieria (Gomphales), but thetree topology and character statereconstructions supported that truffle-like -
Diversity and Distribution of Clavarioid Fungi in Estonia
Folia Cryptog. Estonica, Fasc. 45: 65–80 (2009) Diversity and distribution of clavarioid fungi in Estonia Anton Shiryaev Institute of Plant and Animal Ecology, Ural Division of the Russian Academy of Sciences, 202 8-March St. , RUS-620144 Ekaterinburg, Russia E-mail: [email protected] Abstract: This paper attempts to compile available data on Estonian clavarioid fungi (Basidiomycota) published between 1856 and 2006 (78 publications) and 986 herbarium specimens studied and observations. 103 species have been reported including 46 species new for Estonia. The most frequent species is Typhula erythropus, followed by Macrotyphula juncea, Typhula setipes, Clavulina cinerea, Clavariadelphus ligula, Ramaria gracilis and Typhula phacorrhiza. These constitute around 28% of all observations, but only 6.8% of all species. Twenty one species (20.6%) were collected only once, fifteen species (14.7%) twice and ten species three times (9.8%). Some species rare for whole Europe, but also for its hemiboreal zone, are also infrequently collected, like Clavaria zollingeri, Clavulina amethystina, Lentaria subcaulescens, Multiclavula mucida, Ra- maria botrytis, Ramariopsis crocea, Ramariopsis pulchella and Sparassis crispa. Rare and threatened are the old-growth habitats species like, e.g., Clavaria amoenoides, Clavaria rosea, Clavulinopsis rufipes, Clavulinopsis umbrinella, Multiclavula corynoides, Ramaria broomei and Typhula sphaeroidea. Kokkuvõte: Harikulaadsete kandseente mitmekesisus ja levik Eestis Kirjutises on kokku võetud Eesti harikuliselaadsete kandseente kohta käivad 78 trükises avaldatud andmed (1856–2006), 986 herbaareksemplari uurimise tulemused ja autori vaatlused. Eestist on leitud 103 liiki, neist 46 märgitakse siin esmakordselt. Sagedaim liik on Typhula erythropus, järgnevad Macrotyphula juncea, Typhula setipes, Clavulina cinerea, Clavariadelphus ligula, Ramaria gracilis ja Typhula phacorrhiza. -
Phylogenetic Relationships of the Gomphales Based on Nuc-25S-Rdna, Mit-12S-Rdna, and Mit-Atp6-DNA Combined Sequences
Phylogenetic relationships of the Gomphales based on nuc-25S-rDNA, mit-12S-rDNA, and mit-atp6-DNA combined sequences a b Admir J. GIACHINl ,*, Kentaro HOSAKA , Eduardo NOUHRAc, d A Joseph SPATAFORA , James M. TRAPPE ARTICLE INFO ABSTRACT Phylogenetic relationships among Geastrales, Gomphales, Hysterangiales, and Phallales were estimated via combined sequences: nuclear large subunit ribosomal DNA (nuc-25S- rDNA), mitochondrial small subunit ribosomal DNA (mit-12S-rDNA), and mitochondrial atp6 DNA (mit-atp6-DNA). Eighty-one taxa comprising 19 genera and 58 species were inves- tigated, including members of the Clathraceae, Gautieriaceae, Geastraceae, Gomphaceae, Hysterangiaceae, Phallaceae, Protophallaceae, and Sphaerobolaceae. Although some nodes Keywords: deep in the tree could not be fully resolved, some well-supported lineages were recovered, atp6 and the interrelationships among Gloeocantharellus, Gomphus, Phaeoclavulina, and Turbinel- Gomphales Ius, and the placement of Ramaria are better understood. Both Gomphus sensu lato and Rama- Homobasidiomycetes ria sensu lato comprise paraphyletic lineages within the Gomphaceae. Relationships of the rDNA subgenera of Ramaria sensu lato to each other and to other members of the Gomphales were Systematics clarified. Within Gomphus sensu lato, Gomphus sensu stricto, Turbinellus, Gloeocantharellus and Phaeoclavulina are separated by the presence/absence of clamp connections, spore orna- mentation (echinulate, verrucose, subreticulate or reticulate), and basidiomal morphology (fan-shaped, funnel-shaped or ramarioid). Gautieria, a sequestrate genus in theGautieria- ceae, was recovered as monophyletic and nested with members of Ramaria subgenus Ramaria. This agrees with previous observations of traits shared by these two ectomycor- rhizal taxa, such as the presence of fungal mats in the soil. Clavariadelphus was recovered as a sister group to Beenakia, Kavinia, and Lentaria. -
00010905.Pdf
RUSSIAN ACADEMY OF SCIENCES FAR EASTERN BRANCH INSTITUTE OF BIOLOGY AND SOIL SCIENCE FLORA AND FAUNA OF NORTH-WEST PACIFIC ISLANDS (Materials of International Kuril Island and International Sakhalin Island Projects). VLADIVOSTOK DALNAUKA 2012 ФЕДЕРАЛЬНОЕ ГОСУДАРСТВЕННОЕ БЮДЖЕТНОЕ УЧРЕЖДЕНИЕ НАУКИ БИОЛОГО–ПОЧВЕННЫЙ ИНСТИТУТ ДАЛЬНЕВОСТОЧНОГО ОТДЕЛЕНИЯ РОССИЙСКОЙ АКАДЕМИИ НАУК РАСТИТЕЛЬНЫЙ И ЖИВОТНЫЙ МИР ОСТРОВОВ СЕВЕРО-ЗАПАДНОЙ ЧАСТИ ТИХОГО ОКЕАНА (Материалы Международного курильского и Международного сахалинского проектов) ВЛАДИВОСТОК ДАЛЬНАУКА 2012 УДК 581.9+591.9](571.645) Растительный и животный мир островов северо-западной части Тихого океана (Материалы Международного курильского и Международного сахалинского проектов). – Владивосток: Дальнаука, 2012. – 396 с. ISBN 978–5–8044–1296–9 В коллективной монографии обобщены материалы экспедиций, проведенных в 1994- 2003 гг. в рамках Международного курильского проекта [IKIP] и Международного сахалинского проекта [МСП]. Рассмотрены вопросы состава и формирования флоры высших растений и водорослей, микобиоты, фауны моллюсков, насекомых, птиц, млекопитающих и паразитов рыб на островах северо-западной части Тихого океана. На основании анализа распространения 2266 видов наземных и пресноводных растений, грибов и животных обсуждается таксономическое разнообразие биоты и биогеография острова Сахалин. Книга предназначена для ботаников, зоологов, биогеографов, специалистов в области охраны окружающей среды, преподавателей и студентов высших учебных заведений. Flora and fauna of North-West Pacific islands (Materials of International Kuril Island and International Sakhalin Island Projects). – Vladivostok: Dalnauka, 2012.– 396 p. ISBN 978–5–8044–1296–9 The book treats the results of the International Kuril Island Project [IKIP] and International Sakhalin Island Project [ISIP] expeditions in 1994-2003. The aspects of composition and origin of flora of vascular plants and algae, mycobiota, fauna of mollusks, insects, birds, mammals and parasites of fishes of the North-West Pacific islands are given.