bioRxiv preprint doi: https://doi.org/10.1101/2020.12.02.407783; this version posted December 3, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. ORIGINAL ARTICLE Broken, silent, and in hiding: Tamed endogenous pararetroviruses escape elimination from the genome of sugar beet (Beta vulgaris) Nicola Schmidt1, Kathrin M. Seibt1, Beatrice Weber1, Trude Schwarzacher2,3, Thomas Schmidt†1, and Tony Heitkam*1 1Institute of Botany, Technische Universität Dresden, 01069 Dresden, Germany 2Department of Genetics and Genome Biology, University of Leicester, LE1 7RH Leicester, United Kingdom 3Key Laboratory of Plant Resources Conservation and Sustainable Utilization / Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Xingke Road 723, Tianhe District, Guangzhou, 510650, PR China *Manuscript corresponding author: Tony Heitkam Institute of Botany Technische Universität Dresden 01069 Dresden Germany Phone: (+49) 0351 463 39593 E-Mail:
[email protected] † Deceased 1 August 2019 Running title: Endogenous pararetroviruses in Beta vulgaris 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.12.02.407783; this version posted December 3, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. Schmidt et al. Endogenous pararetroviruses in Beta vulgaris 2 ABSTRACT 3 • Background and Aims 4 Endogenous pararetroviruses (EPRVs) are widespread components of plant genomes 5 that originated from episomal DNA viruses of the Caulimoviridae family.