Soluble Adenylyl Cyclase Inhibition Prevents Human Sperm Functions Essential for Fertilization
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Supplementary Table S4. FGA Co-Expressed Gene List in LUAD
Supplementary Table S4. FGA co-expressed gene list in LUAD tumors Symbol R Locus Description FGG 0.919 4q28 fibrinogen gamma chain FGL1 0.635 8p22 fibrinogen-like 1 SLC7A2 0.536 8p22 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 DUSP4 0.521 8p12-p11 dual specificity phosphatase 4 HAL 0.51 12q22-q24.1histidine ammonia-lyase PDE4D 0.499 5q12 phosphodiesterase 4D, cAMP-specific FURIN 0.497 15q26.1 furin (paired basic amino acid cleaving enzyme) CPS1 0.49 2q35 carbamoyl-phosphate synthase 1, mitochondrial TESC 0.478 12q24.22 tescalcin INHA 0.465 2q35 inhibin, alpha S100P 0.461 4p16 S100 calcium binding protein P VPS37A 0.447 8p22 vacuolar protein sorting 37 homolog A (S. cerevisiae) SLC16A14 0.447 2q36.3 solute carrier family 16, member 14 PPARGC1A 0.443 4p15.1 peroxisome proliferator-activated receptor gamma, coactivator 1 alpha SIK1 0.435 21q22.3 salt-inducible kinase 1 IRS2 0.434 13q34 insulin receptor substrate 2 RND1 0.433 12q12 Rho family GTPase 1 HGD 0.433 3q13.33 homogentisate 1,2-dioxygenase PTP4A1 0.432 6q12 protein tyrosine phosphatase type IVA, member 1 C8orf4 0.428 8p11.2 chromosome 8 open reading frame 4 DDC 0.427 7p12.2 dopa decarboxylase (aromatic L-amino acid decarboxylase) TACC2 0.427 10q26 transforming, acidic coiled-coil containing protein 2 MUC13 0.422 3q21.2 mucin 13, cell surface associated C5 0.412 9q33-q34 complement component 5 NR4A2 0.412 2q22-q23 nuclear receptor subfamily 4, group A, member 2 EYS 0.411 6q12 eyes shut homolog (Drosophila) GPX2 0.406 14q24.1 glutathione peroxidase -
Functional Significance of the Adcy10-Dependent Intracellular
Journal of Cardiovascular Development and Disease Review Functional Significance of the Adcy10-Dependent Intracellular cAMP Compartments Sofya Pozdniakova 1,2,* and Yury Ladilov 1,2 1 Institute of Gender in Medicine, Center for Cardiovascular Research, Charite, 10115 Berlin, Germany; [email protected] 2 DZHK (German Center for Cardiovascular Research), Berlin Partner Site, 10115 Berlin, Germany * Correspondence: [email protected] Received: 5 March 2018; Accepted: 9 May 2018; Published: 11 May 2018 Abstract: Mounting evidence confirms the compartmentalized structure of evolutionarily conserved 30–50-cyclic adenosine monophosphate (cAMP) signaling, which allows for simultaneous participation in a wide variety of physiological functions and ensures specificity, selectivity and signal strength. One important player in cAMP signaling is soluble adenylyl cyclase (sAC). The intracellular localization of sAC allows for the formation of unique intracellular cAMP microdomains that control various physiological and pathological processes. This review is focused on the functional role of sAC-produced cAMP. In particular, we examine the role of sAC-cAMP in different cellular compartments, such as cytosol, nucleus and mitochondria. Keywords: adcy10; cAMP; phosphodiesterase; compartmentalization 1. Introduction Even though 30–50-cyclic adenosine monophosphate (cAMP) was discovered more than half a century ago, it still remains an object of scientific interest. cAMP signaling plays an important role in a wide variety of physiological processes: transcription regulation [1,2], metabolism [3,4], cell migration [5,6], mitochondrial homeostasis [7–11] (reviewed in Reference [12]), as well as cell proliferation [13] (reviewed in Reference [14]) and cell death [15] (reviewed in Reference [16]). The importance of cAMP signaling is underlined by the fact that this pathway is evolutionarily conserved and can be found in all species from microorganisms to mammals [17–19]. -
Supplementary Table 2
Supplementary Table 2. Differentially Expressed Genes following Sham treatment relative to Untreated Controls Fold Change Accession Name Symbol 3 h 12 h NM_013121 CD28 antigen Cd28 12.82 BG665360 FMS-like tyrosine kinase 1 Flt1 9.63 NM_012701 Adrenergic receptor, beta 1 Adrb1 8.24 0.46 U20796 Nuclear receptor subfamily 1, group D, member 2 Nr1d2 7.22 NM_017116 Calpain 2 Capn2 6.41 BE097282 Guanine nucleotide binding protein, alpha 12 Gna12 6.21 NM_053328 Basic helix-loop-helix domain containing, class B2 Bhlhb2 5.79 NM_053831 Guanylate cyclase 2f Gucy2f 5.71 AW251703 Tumor necrosis factor receptor superfamily, member 12a Tnfrsf12a 5.57 NM_021691 Twist homolog 2 (Drosophila) Twist2 5.42 NM_133550 Fc receptor, IgE, low affinity II, alpha polypeptide Fcer2a 4.93 NM_031120 Signal sequence receptor, gamma Ssr3 4.84 NM_053544 Secreted frizzled-related protein 4 Sfrp4 4.73 NM_053910 Pleckstrin homology, Sec7 and coiled/coil domains 1 Pscd1 4.69 BE113233 Suppressor of cytokine signaling 2 Socs2 4.68 NM_053949 Potassium voltage-gated channel, subfamily H (eag- Kcnh2 4.60 related), member 2 NM_017305 Glutamate cysteine ligase, modifier subunit Gclm 4.59 NM_017309 Protein phospatase 3, regulatory subunit B, alpha Ppp3r1 4.54 isoform,type 1 NM_012765 5-hydroxytryptamine (serotonin) receptor 2C Htr2c 4.46 NM_017218 V-erb-b2 erythroblastic leukemia viral oncogene homolog Erbb3 4.42 3 (avian) AW918369 Zinc finger protein 191 Zfp191 4.38 NM_031034 Guanine nucleotide binding protein, alpha 12 Gna12 4.38 NM_017020 Interleukin 6 receptor Il6r 4.37 AJ002942 -
Increased Plasma Levels of Adenylate Cyclase 8 and Camp Are Associated with Obesity and Type 2 Diabetes: Results from a Cross-Sectional Study
biology Article Increased Plasma Levels of Adenylate Cyclase 8 and cAMP Are Associated with Obesity and Type 2 Diabetes: Results from a Cross-Sectional Study 1, 2, , 2, 2 Samy M. Abdel-Halim y, Ashraf Al Madhoun * y , Rasheeba Nizam y, Motasem Melhem , Preethi Cherian 3, Irina Al-Khairi 3, Dania Haddad 2, Mohamed Abu-Farha 3 , Jehad Abubaker 3, Milad S. Bitar 4 and Fahd Al-Mulla 2,* 1 Department of Oncology, Karolinska University Hospital, 17177 Stockholm, Sweden; [email protected] 2 Department of Genetics and Bioinformatics, Dasman Diabetes Institute, Dasman 15462, Kuwait; [email protected] (R.N.); [email protected] (M.M.); [email protected] (D.H.) 3 Department of Biochemistry and Molecular Biology, Dasman Diabetes Institute, Dasman 15462, Kuwait; [email protected] (P.C.); [email protected] (I.A.-K.); [email protected] (M.A.-F.); [email protected] (J.A.) 4 Department of Pharmacology and Toxicology, Faculty of Medicine, Kuwait University, Jabriya 046302, Kuwait; [email protected] * Correspondence: [email protected] (A.A.M.); [email protected] (F.A.-M.); Tel.: +965-2224-2999 (ext. 2805) (A.A.M.); +965-6777-1040 (F.A.-M.) These authors equally contributed to this work. y Received: 5 July 2020; Accepted: 20 August 2020; Published: 24 August 2020 Abstract: Adenylate cyclases (ADCYs) catalyze the conversion of ATP to cAMP,an important co-factor in energy homeostasis. Giving ADCYs role in obesity, diabetes and inflammation, we questioned whether calcium-stimulated ADCY isoforms may be variably detectable in human plasma. -
ADCY10 Frameshift Variant Leading to Severe Recessive
Human Reproduction, Vol.34, No.6, pp. 1155–1164, 2019 Advance Access Publication on May 23, 2019 doi:10.1093/humrep/dez048 ORIGINAL ARTICLE Reproductive genetics ADCY10 frameshift variant leading to severe recessive asthenozoospermia Downloaded from https://academic.oup.com/humrep/article-abstract/34/6/1155/5492390 by Promedica Health System user on 20 July 2019 and segregating with absorptive hypercalciuria Arvand Akbari1,2, Giovanni Battista Pipitone3, Zahra Anvar4,5, Mojtaba Jaafarinia1,2, Maurizio Ferrari3,6,7, Paola Carrera3,6,*, and Mehdi Totonchi8,9,* 1Department of Biology, Faculty of Science, Fars Science and Research Branch, Islamic Azad University, Marvdasht, Iran 2Department of Biology, Faculty of Science, Marvdasht Branch, Islamic Azad University, Marvdasht, Iran 3Laboratory of Clinical Molecular Biology and Cytogenetics, IRCCS San Raffaele Hospital, Milan, Italy 4Infertility Research Center, Shiraz University of Medical Sciences, Shiraz, Iran 5Department of Obstetrics & Gynecology, School of Medicine, Shiraz University of Medical Sciences, Shiraz, Iran 6Genomic Unit for the Diagnosis of Human Disorders, Division of Genetics and Cell Biology, IRCCS San Raffaele Hospital, Milan, Italy 7Vita-Salute San Raffaele University, Milan, Italy 8Department of Genetics, Reproductive Biomedicine Research Center, Royan Institute for Reproductive Biomedicine, ACECR, Tehran, Iran 9Department of Stem Cells and Developmental Biology, Cell Science Research Center, Royan Institute for Stem Cell Biology and Technology, ACECR, Tehran, Iran *Correspondence -
Epigenetic Modifications to Cytosine and Alzheimer's Disease
University of Kentucky UKnowledge Theses and Dissertations--Chemistry Chemistry 2017 EPIGENETIC MODIFICATIONS TO CYTOSINE AND ALZHEIMER’S DISEASE: A QUANTITATIVE ANALYSIS OF POST-MORTEM TISSUE Elizabeth M. Ellison University of Kentucky, [email protected] Digital Object Identifier: https://doi.org/10.13023/ETD.2017.398 Right click to open a feedback form in a new tab to let us know how this document benefits ou.y Recommended Citation Ellison, Elizabeth M., "EPIGENETIC MODIFICATIONS TO CYTOSINE AND ALZHEIMER’S DISEASE: A QUANTITATIVE ANALYSIS OF POST-MORTEM TISSUE" (2017). Theses and Dissertations--Chemistry. 86. https://uknowledge.uky.edu/chemistry_etds/86 This Doctoral Dissertation is brought to you for free and open access by the Chemistry at UKnowledge. It has been accepted for inclusion in Theses and Dissertations--Chemistry by an authorized administrator of UKnowledge. For more information, please contact [email protected]. STUDENT AGREEMENT: I represent that my thesis or dissertation and abstract are my original work. Proper attribution has been given to all outside sources. I understand that I am solely responsible for obtaining any needed copyright permissions. I have obtained needed written permission statement(s) from the owner(s) of each third-party copyrighted matter to be included in my work, allowing electronic distribution (if such use is not permitted by the fair use doctrine) which will be submitted to UKnowledge as Additional File. I hereby grant to The University of Kentucky and its agents the irrevocable, non-exclusive, and royalty-free license to archive and make accessible my work in whole or in part in all forms of media, now or hereafter known. -
Characterization of a Novel Signal Transducer Element Intrinsic To
Characterization of a Novel Signal Transducer Element Intrinsic to Class IIIa/b Adenylate Cyclases and Guanylate Cyclases Miriam Ziegler1, Jens Bassler2, Stephanie Beltz1, Anita Schultz1, Andrei N. Lupas2, Joachim E. Schultz1* 1 Pharmazeutisches Institut der Universität Tübingen, Auf der Morgenstelle 8, 72076 Tübingen, Germany 2 Max-Planck-Institut für Entwicklungsbiologie, Abt. Proteinevolution, Spemannstr. 35, 72076 Tübingen, Germany Article Running title Novel Cylase-Transducer-Element in Adenylate Cyclases Article type : Regular Paper Correspondence J. E. Schultz, Pharmazeutisches Institut der Universität Tübingen, Auf der Morgenstelle 8, D- 72076 Tübingen, Germany, FAX: +49 7071 292476 Tel: +49 7071 2972475; E-mail: [email protected] Keywords adenylate cyclase, cyclic AMP (cAMP), receptor regulation, quorum-sensing, signal transduction, Legionella This article has been accepted for publication and undergone full peer review but has not Accepted been through the copyediting, typesetting, pagination and proofreading process, which may lead to differences between this version and the Version of Record. Please cite this article as doi: 10.1111/febs.14047 This article is protected by copyright. All rights reserved. Abbreviations AC, adenylate cyclase; GC, guanylate cyclase; CTE, cyclase-transducer-element; LAI-1, Legionella autoinducer-1; CAI-1, Legionella autoinducer-1; QS, quorum-sensing; CLANS, CLuster ANalysis of Sequences. Cholera Abstract Adenylate cyclases (ACs) are signalling proteins that produce the second messenger cAMP. Class III ACs comprises four groups (class IIIa-d); of these, class IIIa and IIIb ACs have been identified in bacteria and eukaryotes. Many class IIIa ACs are anchored to membranes via hexahelical domains. In eukaryotic ACs, membrane anchors are well conserved, suggesting that this region possesses important functional characteristics that are as yet Article unknown. -
Protective Potential of Mir-146A-5P and Its Underlying Molecular
Li et al. Cancer Cell Int (2019) 19:167 https://doi.org/10.1186/s12935-019-0886-y Cancer Cell International PRIMARY RESEARCH Open Access Protective potential of miR-146a-5p and its underlying molecular mechanism in diverse cancers: a comprehensive meta-analysis and bioinformatics analysis Mei‑wei Li†, Li Gao†, Yi‑wu Dang, Ping Li, Zu‑yun Li*, Gang Chen* and Dian‑zhong Luo Abstract Background/aims: Studies have shown that miR‑146a‑5p was diferentially expressed in diverse cancers, but the associations between miR‑146a‑5p expression and prognosis across multiple types of cancer as well its potential targets and downstream pathways have not been comprehensively analyzed. In this study, we performed the frst meta‑analysis of the prognostic value of miR‑146a‑5p expression in diverse malignancies and explored prospective targets of miR‑146a‑5p and related signaling pathways. Methods: A thorough search for articles related to miR‑146a‑5p was performed, and RNA‑seq data from The Cancer Genome Atlas (TCGA) and microarray data from gene expression omnibus profles were used to collect information about the prognostic value of miR‑146a‑5p. A comprehensive meta‑analysis was conducted. Twelve platforms in miRWalk 2.0 were applied to predict targets of miR‑146a‑5p. TCGA RNA‑seq data were used to validate the inverse relationships between miR‑146a‑5p and its likely targets. Subsequently, gene ontology and pathway analyses were conducted using Funrich version 3.1.3. Potential protein–protein interaction (PPI) networks were constructed. Poten‑ tial target genes of miR‑146a‑5p in lung cancer were validated by RT‑qPCR. -
Targeting the Sac-Dependent Camp Pool to Prevent SARS-Cov-2 Infection
cells Review Targeting the sAC-Dependent cAMP Pool to Prevent SARS-Cov-2 Infection Muhammad Aslam 1,2 and Yury Ladilov 3,* 1 Experimental Cardiology, Department of Internal Medicine, Justus Liebig University, 35392 Giessen, Germany; [email protected] 2 DZHK (German Centre for Cardiovascular Research), Department of Cardiology, Kerckhoff Clinic GmbH partner site Rhein-Main, 61231 Bad Nauheim, Germany 3 Independent Researcher, 42929 Wermelskirchen, Germany * Correspondence: [email protected] Received: 27 July 2020; Accepted: 24 August 2020; Published: 25 August 2020 Abstract: An outbreak of the novel coronavirus (CoV) SARS-CoV-2, the causative agent of COVID-19 respiratory disease, infected millions of people since the end of 2019, led to high-level morbidity and mortality and caused worldwide social and economic disruption. There are currently no antiviral drugs available with proven efficacy or vaccines for its prevention. An understanding of the underlying cellular mechanisms involved in virus replication is essential for repurposing the existing drugs and/or the discovery of new ones. Endocytosis is the important mechanism of entry of CoVs into host cells. Endosomal maturation followed by the fusion with lysosomes are crucial events in endocytosis. Late endosomes and lysosomes are characterized by their acidic pH, which is generated by a proton transporter V-ATPase and required for virus entry via endocytic pathway. The cytoplasmic cAMP pool produced by soluble adenylyl cyclase (sAC) promotes V-ATPase recruitment to endosomes/lysosomes and thus their acidification. In this review, we discuss targeting the sAC-specific cAMP pool as a potential strategy to impair the endocytic entry of the SARS-CoV-2 into the host cell. -
Anti-ADCY5 Antibody (ARG10771)
Product datasheet [email protected] ARG10771 Package: 50 μg anti-ADCY5 antibody Store at: -20°C Summary Product Description Rabbit Polyclonal antibody recognizes ADCY5 Tested Reactivity Hu, Ms, Rat Tested Application Confocal, Dot, ELISA, ICC/IF, IHC, IP, WB Host Rabbit Clonality Polyclonal Isotype IgG Target Name ADCY5 Antigen Species Rat Immunogen Synthetic peptide from Rat ADCY5. Conjugation Un-conjugated Alternate Names FDFM; ATP pyrophosphate-lyase 5; AC5; Adenylate cyclase type V; Adenylate cyclase type 5; EC 4.6.1.1; Adenylyl cyclase 5 Application Instructions Application table Application Dilution Confocal 1:200 - 1:1000 Dot 1:10000 ELISA 1:10000 ICC/IF 1:200 - 1:1000 IHC 1:200 - 1:1000 IP 1:200 WB 1:500 Application Note * The dilutions indicate recommended starting dilutions and the optimal dilutions or concentrations should be determined by the scientist. Calculated Mw 139 kDa Properties Form Liquid Purification Affinity purified. Buffer Tris-Glycine Buffer (pH 7.4 - 7.8), Hepes, 0.02% Sodium azide, 30% Glycerol and 0.5% BSA. Preservative 0.02% Sodium azide www.arigobio.com 1/2 Stabilizer 30% Glycerol and 0.5% BSA Concentration 0.5 mg/ml Storage instruction For continuous use, store undiluted antibody at 2-8°C for up to a week. For long-term storage, aliquot and store at -20°C. Storage in frost free freezers is not recommended. Avoid repeated freeze/thaw cycles. Suggest spin the vial prior to opening. The antibody solution should be gently mixed before use. Note For laboratory research only, not for drug, diagnostic or other use. Bioinformation Gene Symbol Adcy5 Gene Full Name adenylate cyclase 5 Background This gene encodes a member of the membrane-bound adenylyl cyclase enzymes. -
Comparative Genomic Analysis Suggests That the Sperm-Specific
Romero and Nishigaki Zoological Letters (2019) 5:25 https://doi.org/10.1186/s40851-019-0141-3 RESEARCHARTICLE Open Access Comparative genomic analysis suggests that the sperm-specific sodium/proton exchanger and soluble adenylyl cyclase are key regulators of CatSper among the Metazoa Francisco Romero and Takuya Nishigaki* Abstract Background: CatSper is a sperm-specific calcium ion (Ca2+) channel, which regulates sperm flagellar beating by tuning cytoplasmic Ca2+ concentrations. Although this Ca2+ channel is essential for mammalian fertilization, recent bioinformatics analyses have revealed that genes encoding CatSper are heterogeneously distributed throughout the eukaryotes, including vertebrates. As this channel is activated by cytoplasmic alkalization in mammals and sea urchins, it has been proposed that the sperm-specific Na+/H+ exchanger (sNHE, a product of the SLC9C gene family) positively regulates its activity. In mouse, sNHE is functionally coupled to soluble adenylyl cyclase (sAC). CatSper, sNHE, and sAC have thus been considered functionally interconnected in the control of sperm motility, at least in mouse and sea urchin. Results: We carried out a comparative genomic analysis to explore phylogenetic relationships among CatSper, sNHE and sAC in eukaryotes. We found that sNHE occurs only in Metazoa, although sAC occurs widely across eukaryotes. In animals, we found correlated and restricted distribution patterns of the three proteins, suggesting coevolution among them in the Metazoa. Namely, nearly all species in which CatSper is conserved also preserve sNHE and sAC. In contrast, in species without sAC, neither CatSper nor sNHE is conserved. On the other hand, the distribution of another testis-specific NHE (NHA, a product of the SLC9B gene family) does not show any apparent association with that of CatSper. -
Anoctamin 1 - a Member of a Novel Family of Ion Channels with Extended Functions and Significance in Disease
UNIVERSIDADE DE LISBOA FACULDADE DE CIÊNCIAS Anoctamin 1 - A Member of a Novel Family of Ion Channels with Extended Functions and Significance in Disease Doutoramento em Biologia Especialidade: Biologia de Sistemas Joana Ramos Rapaz Lérias Tese orientada por: Prof. Dr. Karl Kunzelmann e Prof. Dr. Margarida D. Amaral Documento especialmente elaborado para a obtenção do grau de doutor 2018 UNIVERSIDADE DE LISBOA FACULDADE DE CIÊNCIAS Anoctamin 1 - A Member of a Novel Family of Ion Channels with Extended Functions and Significance in Disease Doutoramento em Biologia Especialidade: Biologia de Sistemas Joana Ramos Rapaz Lérias Tese orientada por: Prof. Dr. Karl Kunzelmann e Prof. Dr. Margarida D. Amaral Júri: Presidente: ● Doutor Rui Manuel dos Santos Malhó, Professor Catedrático da Faculdade de Ciências da Universidade de Lisboa Vogais: ● Doutor Karl Kunzelmann, Kunzelmann, Professor, Faculty of Biology and Pre-Clinical Medicine da University of Regensburg, Alemanha (orientador); ● Doutor Ana Colette Pereira de Castro Osório Maurício, Professora Associada com Agregação, Instituto de Ciências Biomédicas Abel Salazar (ICBAS) da Universidade do Porto; ● Doutor Peter Jordan, Investigador Principal, Departamento de Genética Humana do Instituto Nacional de Saúde Doutor Ricardo Jorge; ● Doutora Maria da Graça Tavares Rebelo de Soveral Rodrigues, Professora Associada com Agregação, Faculdade de Farmácia da Universidade de Lisboa. Documento especialmente elaborado para a obtenção do grau de doutor Fundação para a Ciência e Tecnologia do Ministério da Educação e Ciência (FCT/ SFRH / BD / 52489 / 2014) 2018 De acordo com o disposto no artigo 24º do Regulamento de Estudos de Pós- Graduação da Universidade de Lisboa, Despacho nº 7024/2017, publicado no Diário da República – 2ª Série – nº 155 – 11 de Agosto de 2017, foram utilizados nesta dissertação resultados incluídos nos seguintes artigos: 1.