Neuronal Calcium Signaling Review
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Geometric Control of Frequency Modulation of Camp Oscillations Due to Calcium in Dendritic Spines
Article Geometric Control of Frequency Modulation of cAMP Oscillations due to Calcium in Dendritic Spines Donya Ohadi1 and Padmini Rangamani1,* 1Department of Mechanical and Aerospace Engineering, University of California, San Diego, La Jolla, California ABSTRACT The spatiotemporal regulation of cyclic adenosine monophosphate (cAMP) and its dynamic interactions with other second messengers such as calcium are critical features of signaling specificity required for neuronal development and connectivity. cAMP is known to contribute to long-term potentiation and memory formation by controlling the formation and regu- lation of dendritic spines. Despite the recent advances in biosensing techniques for monitoring spatiotemporal cAMP dynamics, the underlying molecular mechanisms that attribute to the subcellular modulation of cAMP remain unknown. In this work, we model the spatiotemporal dynamics of calcium-induced cAMP signaling pathway in dendritic spines. Using a three-dimensional reaction-diffusion model, we investigate the effect of different spatial characteristics of cAMP dynamics that may be responsible for subcellular regulation of cAMP concentrations. Our model predicts that the volume/surface ratio of the spine, regulated through the spine head size, spine neck size, and the presence of physical barriers (spine apparatus), is an important regulator of cAMP dynamics. Furthermore, localization of the enzymes responsible for the synthesis and degradation of cAMP in different compartments also modulates the oscillatory patterns of cAMP through exponential relationships. Our findings shed light on the significance of complex geometric and localization relationships for cAMP dynamics in dendritic spines. SIGNIFICANCE Dendritic spines are small signaling subcompartments along dendrites in neurons. They are the primary sites of postsynaptic activity. Here, we investigate how spine size and spatial organization of enzymes can change the dynamics of cyclic adenosine monophosphate, a second messenger interacting with calcium. -
Fear and Safety Learning Differentially Affect Synapse Size and Dendritic Translation in the Lateral Amygdala
Fear and safety learning differentially affect synapse size and dendritic translation in the lateral amygdala Linnaea E. Ostroffa,1, Christopher K. Caina, Joseph Bedonta,b, Marie H. Monfilsa, and Joseph E. LeDouxa,c aCenter for Neural Science, New York University, New York, NY 10003; bDepartment of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, MD 21205; and cEmotional Brain Institute, Nathan S. Kline Institute for Psychiatry Research, Orangeburg, NY 10962 Edited by Richard L. Huganir, Johns Hopkins University School of Medicine, Baltimore, MD, and approved April 13, 2010 (received for review November 19, 2009) Fear learning is associated with changes in synapse strength in the clearly involved in hippocampal LTP and is suspected to occur with lateral amygdala (LA). To examine changes in LA dendritic spine fear conditioning, although this has not been directly observed structure with learning, we used serial electron microscopy to re- (22–25). We found that there were more polyribosomes in LA construct dendrites after either fear or safety conditioning. The dendrites after fear conditioning and that their presence in spines spine apparatus, a smooth endoplasmic reticulum (sER) specializa- was differentially associated with changes in synapse size. tion found in very large spines, appeared more frequently after fear conditioning. Fear conditioning was associated with larger synapses Results on spines that did not contain a spine apparatus, whereas safety Behavioral Evidence for Single-Session Fear or Safety Learning. To conditioning resulted in smaller synapses on these spines. Synapses compare spine morphology in adult rats during consolidation of on spines with a spine apparatus were smaller after safety con- fear learning, we designed and tested two training protocols of ditioning but unchanged with fear conditioning, suggesting a ceil- equal length with equal numbers of tone and shock pre- ing effect. -
Calcium Signaling at the Endoplasmic Reticulum Fine-Tuning Stress
Cell Calcium 70 (2018) 24–31 Contents lists available at ScienceDirect Cell Calcium journal homepage: www.elsevier.com/locate/ceca Review Calcium signaling at the endoplasmic reticulum: fine-tuning stress responses T ⁎ Amado Carreras-Suredaa,b,c, Philippe Pihána,b,c, Claudio Hetza,b,c,d,e, a Center for Geroscience, Brain Health and Metabolism, Faculty of Medicine, University of Chile, Chile b Biomedical Neuroscience Institute, Faculty of Medicine, University of Chile, Santiago, Chile c Program of Cellular and Molecular Biology, Institute of Biomedical Sciences, University of Chile, Santiago, Chile d Buck Institute for Research on Aging, Novato, CA, 94945, USA e Department of Immunology and Infectious Diseases, Harvard School of Public Health, Boston, MA 02115, USA ARTICLE INFO ABSTRACT Keywords: Endoplasmic reticulum (ER) calcium signaling is implicated in a myriad of coordinated cellular processes. The ER homeostasis ER calcium content is tightly regulated as it allows a favorable environment for protein folding, in addition to ER stress operate as a major reservoir for fast and specific release of calcium. Altered ER homeostasis impacts protein Calcium handling mechanisms folding, activating the unfolded protein response (UPR) as a rescue mechanism to restore proteostasis. ER cal- Calcium homeostasis cium release impacts mitochondrial metabolism and also fine-tunes the threshold to undergo apoptosis under Unfolded protein response chronic stress. The global coordination between UPR signaling and energetic demands takes place at mi- Mitochondrial associated membranes Mitochondria biology tochondrial associated membranes (MAMs), specialized subdomains mediating interorganelle communication. Here we discuss current models explaining the functional relationship between ER homeostasis and various cellular responses to coordinate proteostasis and metabolic maintenance. -
Calcium Signaling in Aging and Neurodegenerative Diseases 2019
International Journal of Molecular Sciences Meeting Report Calcium Signaling in Aging and Neurodegenerative Diseases 2019 Luísa Cortes 1,2 , João Malva 2,3,4, Ana Cristina Rego 1,2,3 and Cláudia F. Pereira 1,2,3,* 1 Center for Neuroscience and Cell Biology (CNC), University of Coimbra, Rua Larga, Faculty of Medicine, Polo I, 1st floor, 3004-504 Coimbra, Portugal; [email protected] (L.C.); [email protected] (A.C.R.) 2 CIBB-Center for Innovative Biomedicine and Biotechnology, University of Coimbra, Rua Larga, Faculty of Medicine, Polo I, 1st floor, 3004-504 Coimbra, Portugal; [email protected] 3 Faculty of Medicine, Azinhaga de Santa Comba, Celas, 3000-548 Coimbra, Portugal 4 iCRB- Coimbra Institute for Clinical and Biomedical Research; Azinhaga de Santa Comba, Celas, 3000-548 Coimbra, Portugal * Correspondence: [email protected] Received: 28 December 2019; Accepted: 4 February 2020; Published: 7 February 2020 Abstract: The European Calcium Society (ECS) workshop, which is held every 2 years, is a dedicated meeting of scientists interested in the elucidation of the action of calcium binding, calcium signaling and the study of proteins and organelles, such as mitochondria and endoplasmic reticulum, thereby involved, either in health and disease conditions. The 8th edition of the ECS workshop was organized by a group of researchers from the University of Coimbra, Portugal, in close collaboration with ECS board members. Thanks to the central role of “Calcium Signaling in Aging and Neurodegenerative Disorders”, the ECS 2019 workshop was attended by 62 experts who presented their results in a plenary lecture and five regular symposia, two oral communication sessions and two poster sessions, followed by a hands-on session on calcium imaging. -
Ultrastructural Analysis of Spine Plasticity 11
Ultrastructural Analysis of Spine Plasticity 11 Ultrastructural Analysis of Spine Plasticity J N Bourne and K M Harris, Medical College of from the shaft to spines. Similarly, endosomal compart- Georgia, Augusta, GA, USA ments including coated pits and vesicles, large vesicles, ã 2009 Elsevier Ltd. All rights reserved. tubules, and multivesicular bodies are restricted to a subpopulation of dendritic spines that differs from spines that contain SER. Mitochondria rarely occur in dendritic spines and are usually restricted to those Introduction that are very large, complex, and highly branched. Dendritic spines are small protrusions that serve as the However, during periods of active synapse formation major site of excitatory synaptic transmission in the and remodeling in cultured neurons, mitochondria brain. The shape and density of spines can be affected can localize to smaller dendritic spines. by numerous factors, including developmental stage, Postsynaptic Targets experimental preparation, temperature, exposure to enriched environments, and neuronal pathology. In Evaluation of dendritic spine structure readily reveals addition, physiological models of learning, including them to be the major postsynaptic target of excitatory long-term potentiation (LTP) and long-term depres- synaptic input (Figure 2(a)). Since all dendritic spines sion (LTD), have indicated that alterations in synaptic have at least one excitatory synapse on their head, ultrastructure may underlie the storage of information more spines mean more synapses and accordingly in the brain. more point-to-point connections in a neuronal ensemble involving spiny neurons. The size of the Spine Structure and Function spine head also influences the amount of synaptic input, because larger spines are more sensitive to Spine Shape glutamate, the major excitatory neurotransmitter in the brain. -
A Biochemist's View of Long-Term Potentiation Erik D
Downloaded from learnmem.cshlp.org on October 4, 2021 - Published by Cold Spring Harbor Laboratory Press REVIEW A Biochemist's View of Long-term Potentiation Erik D. Roberson, Joey D. English, and J. David Sweatt ~ Division of Neur0science Bayl0r College of Medicine Houston, Texas 77030 Abstract teractions. Explanations of LTP in terms of changes in synaptic structure (Edwards 1995) or on the This review surveys the molecular basis of silent synapses becoming functional (Isaac mechanisms of long-term potentiation et al. 1995) recently have been proposed. It is (LTP) from the point of view of a worth keeping in mind, though, that even those biochemist. On the basis of available data, processes must have some underlying biochemical LTP in area CA1 of the hippocampus is basis, for any persisting change in a neuron's func- divided into three phases--initial, early, and tion must be produced by a persisting change in late---and the mechanisms contributing to one or more of its proteins [or, perhaps less likely, the induction and expression of each phase in persisting changes to one of its two other mac- are examined. We focus on evidence for the romolecular complexes, DNA and RNA (see Crick involvement of various second messengers 1984)]. Thus, an explanation of LTP in terms of and their effectors as well as the biochemical changes is not mutually exclusive of biochemical strategies employed in each an explanation based on, for example, structure; in phase to convert a transient signal into a fact, a biochemical explanation is a necessary part lasting change in the neuron. -
Neuronal Calcium Sensor-1 Enhancement of Insp3 Receptor Activity Is Inhibited by Therapeutic Levels of Lithium
Neuronal calcium sensor-1 enhancement of InsP3 receptor activity is inhibited by therapeutic levels of lithium Christina Schlecker, … , Klara Szigeti-Buck, Barbara E. Ehrlich J Clin Invest. 2006;116(6):1668-1674. https://doi.org/10.1172/JCI22466. Research Article Neuroscience Regulation and dysregulation of intracellular calcium (Ca2+) signaling via the inositol 1,4,5-trisphosphate receptor (InsP3R) has been linked to many cellular processes and pathological conditions. In the present study, addition of neuronal calcium sensor-1 (NCS-1), a high-affinity, low-capacity, calcium-binding protein, to purified InsP3R type 1 (InsP3R1) increased the channel activity in both a calcium-dependent and -independent manner. In intact cells, enhanced expression of NCS-1 resulted in increased intracellular calcium release upon stimulation of the phosphoinositide signaling pathway. To determine whether InsP3R1/NCS-1 interaction could be functionally relevant in bipolar disorders, conditions in which NCS-1 is highly expressed, we tested the effect of lithium, a salt widely used for treatment of bipolar disorders. Lithium inhibited the enhancing effect of NCS-1 on InsP3R1 function, suggesting that InsP3R1/NCS-1 interaction is an essential component of the pathomechanism of bipolar disorder. Find the latest version: https://jci.me/22466/pdf Research article Neuronal calcium sensor-1 enhancement of InsP3 receptor activity is inhibited by therapeutic levels of lithium Christina Schlecker,1,2,3 Wolfgang Boehmerle,1,4 Andreas Jeromin,5 Brenda DeGray,1 Anurag Varshney,1 Yogendra Sharma,6 Klara Szigeti-Buck,7 and Barbara E. Ehrlich1,3 1Department of Pharmacology, Yale University, New Haven, Connecticut, USA. 2Department of Neuroscience, University of Magdeburg, Magdeburg, Germany. -
Dendritic Spine Geometry and Spine Apparatus Organization Govern the Spatiotemporal Dynamics of Calcium
bioRxiv preprint doi: https://doi.org/10.1101/386367; this version posted May 29, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Dendritic spine geometry and spine apparatus organization govern the spatiotemporal dynamics of calcium Miriam Bell1, Tom Bartol2, Terrence Sejnowski2,3, and Padmini Rangamani1,* 1 Department of Mechanical and Aerospace Engineering, University of California San Diego, La Jolla, United States 2 Howard Hughes Medical Institute, Salk Institute for Biological Studies, La Jolla, United States 3 Division of Biological Sciences, University of California, San Diego, San Diego, United States * [email protected]. Abstract Dendritic spines are small subcompartments that protrude from the dendrites of neurons and are important for signaling activity and synaptic communication. These subcompartments have been characterized to have different shapes. While it is known that these shapes are associated with spine function, the specific nature of these shape-function relationships is not well understood. In this work, we systematically investigated the relationship between the shape and size of both the spine head and spine apparatus, a specialized endoplasmic reticulum compartment in the spine head, in modulating rapid calcium dynamics using mathematical modeling. We developed a spatial multi-compartment reaction-diffusion model of calcium dynamics in three dimensions with various flux sources including N-methyl-D-aspartate receptors (NMDAR), voltage sensitive calcium channels (VSCC), and different ion pumps on the plasma membrane. -
Local Resources of Polyribosomes and SER Promote Synapse
www.nature.com/scientificreports OPEN Local resources of polyribosomes and SER promote synapse enlargement and spine clustering Received: 26 March 2015 Accepted: 7 February 2019 after long-term potentiation in Published: xx xx xxxx adult rat hippocampus Michael A. Chirillo1,2, Mikayla S. Waters1,3, Laurence F. Lindsey1,4, Jennifer N. Bourne1,5 & Kristen M. Harris1 Synapse clustering facilitates circuit integration, learning, and memory. Long-term potentiation (LTP) of mature neurons produces synapse enlargement balanced by fewer spines, raising the question of how clusters form despite this homeostatic regulation of total synaptic weight. Three-dimensional reconstruction from serial section electron microscopy (3DEM) revealed the shapes and distributions of smooth endoplasmic reticulum (SER) and polyribosomes, subcellular resources important for synapse enlargement and spine outgrowth. Compared to control stimulation, synapses were enlarged two hours after LTP on resource-rich spines containing polyribosomes (4% larger than control) or SER (15% larger). SER in spines shifted from a single tubule to complex spine apparatus after LTP. Negligible synapse enlargement (0.6%) occurred on resource-poor spines lacking SER and polyribosomes. Dendrites were divided into discrete synaptic clusters surrounded by asynaptic segments. Spine density was lowest in clusters having only resource-poor spines, especially following LTP. In contrast, resource-rich spines preserved neighboring resource-poor spines and formed larger clusters with elevated total synaptic weight following LTP. These clusters also had more shaft SER branches, which could sequester cargo locally to support synapse growth and spinogenesis. Thus, resources appear to be redistributed to synaptic clusters with LTP-related synapse enlargement while homeostatic regulation suppressed spine outgrowth in resource-poor synaptic clusters. -
Calcium Activated Calpain Specifically Cleaves Glutamate Receptor IIA but Not IIB at the Drosophila Neuromuscular Junction
This Accepted Manuscript has not been copyedited and formatted. The final version may differ from this version. A link to any extended data will be provided when the final version is posted online. Research Articles: Cellular/Molecular Calcium Activated Calpain Specifically Cleaves Glutamate Receptor IIA but not IIB at the Drosophila Neuromuscular Junction Elsayed Metwally1,2, Guoli Zhao1, Wenhua Li1, Qifu Wang1 and Yong Q. Zhang1,2 1State Key Laboratory for Molecular and Developmental Biology, CAS Center for Excellence in Brain Science and Intelligence Technology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China. 2International College, University of Chinese Academy of Sciences, Beijing 10080, China. https://doi.org/10.1523/JNEUROSCI.2213-17.2019 Received: 31 July 2017 Revised: 21 December 2018 Accepted: 16 January 2019 Published: 31 January 2019 Author contributions: E.M., G.Z., and Y.Q.Z. designed research; E.M., G.Z., W.L., and Q.W. performed research; E.M., G.Z., and Y.Q.Z. analyzed data; E.M. and Y.Q.Z. wrote the paper. Conflict of Interest: The authors declare no competing financial interests. This work was supported by the Strategic Priority Research Program B of the Chinese Academy of Sciences (XDBS1020100) and the National Science Foundation of China (NSFC No 31110103907 and 31490590) to Y.Q. Zhang and NSFC grant No 31500824 to G. Zhao. We thank Drs. Endre Kókai and Helena Araujo for antibodies and flies. We thank Bloomington and Tsinghua stock centers for supplying stocks. We are grateful to Drs. Yingchun Wang and Cathrine Rein Carlson for identification of cleavage sites and Dr. -
Calcium Signaling in Plants
CMLS, Cell. Mol. Life Sci. 55 (1999) 214–232 1420-682X/99/020214-19 $ 1.50+0.20/0 © Birkha¨user Verlag, Basel, 1999 Calcium signaling in plants J. J. Rudd and V. E. Franklin-Tong* Wolfson Laboratory for Plant Molecular Biology, School of Biological Sciences, University of Birmingham, Edgbaston, Birmingham, B15 2TT (UK), Fax +44 121 414 5925, e-mail: [email protected] 2+ Abstract. Changes in the cytosolic concentration of cal- Characteristic changes in [Ca ]i have been seen to 2+ cium ions ([Ca ]i) play a key second messenger role in precede the responses of plant cells and whole plants to signal transduction. These changes are visualized by physiological stimuli. This has had a major impact on making use of either Ca2+-sensitive fluorescent dyes or our understanding of cell signaling in plants. The next the Ca2+-sensitive photoprotein, aequorin. Here we challenge will be to establish how the Ca2+ signals are describe the advances made over the last 10 years or so, encrypted and decoded in order to provide specificity, which have conclusively demonstrated a second messen- and we discuss the current understanding of how this 2+ ger role for [Ca ]i in a few model plant systems. may be achieved. Key words. Cytosolic calcium; signaling; Ca2+ imaging; angiosperms. 2+ 2+ Signal transduction in plant cells has rapidly become a cytosolic free Ca ([Ca ]i) is generally regulated in major topic of research that has emerged from the mammalian and plant cells. We will consider the major disciplines of genetics, molecular biology, physiology advances achieved in this field over the last 10 years or and biochemistry and now largely combines these disci- so, which have been made possible by the new genera- 2+ plines in order to advance our knowledge of how plants tion of dyes which accurately report [Ca ]i, together sense, and respond to, the diversity of extracellular with the advent of use of aequorin in transformed stimuli they are exposed to. -
The Structure and Function of Actin Cytoskeleton in Mature
The Structure and Function of Actin Cytoskeleton in Mature Glutamatergic Dendritic Spines Alba Bellot, Biuse Guivernau, Marta Tajes, Mònica Bosch-Morató, Victòria Valls- Comamala and Francisco J. Muñoz * Laboratory of Molecular Physiology and Channelopathies, Department of Experimental and Health Sciences, Universitat Pompeu Fabra (UPF), Barcelona, Catalonia, Spain * To whom correspondence should be addressed: Dr. Francisco J. Muñoz, Laboratori de Fisiologia Molecular i Canalopaties, Universitat Pompeu Fabra, C/ Dr. Aiguader, 88, Barcelona 08003, Spain; Fax: +34 93 316 09 01; Phone: +34 93 316 08 52; E-mail: [email protected] Abstract Dendritic spines are actin-rich protrusions from the dendritic shaft, considered to be the locus where most synapses occur, as they receive the vast majority of excitatory connections in the central nervous system (CNS). Interestingly, hippocampal spines are plastic structures that contain a dense array of molecules involved in postsynaptic signalling and synaptic plasticity. Since changes in spine shape and size are correlated with the strength of excitatory synapses, spine morphology directly reflects spine function. Therefore several neuropathologies are associated with defects in proteins located at the spines. The present work is focused on the spine actin cytoskeleton attending to its structure and function mainly in glutamatergic neurons. It addresses the study of the structural plasticity of dendritic spines associated with long-term potentiation (LTP) and the mechanisms that underlie learning and memory formation. We have integrated the current knowledge on synaptic proteins to relate this plethora of molecules with actin and actin-binding proteins. We further included recent findings that outline key uncharacterized proteins that would be useful to unveil the real ultrastructure and function of dendritic spines.