Recent Advances in Primary Ciliary Dyskinesia Genetics Małgorzata Kurkowiak,1,2 Ewa Ziętkiewicz,1 Michał Witt1,2

Total Page:16

File Type:pdf, Size:1020Kb

Recent Advances in Primary Ciliary Dyskinesia Genetics Małgorzata Kurkowiak,1,2 Ewa Ziętkiewicz,1 Michał Witt1,2 JMG Online First, published on October 28, 2014 as 10.1136/jmedgenet-2014-102755 Review J Med Genet: first published as 10.1136/jmedgenet-2014-102755 on 28 October 2014. Downloaded from Recent advances in primary ciliary dyskinesia genetics Małgorzata Kurkowiak,1,2 Ewa Ziętkiewicz,1 Michał Witt1,2 1Department of Molecular and ABSTRACT structures like outer dynein arms (ODAs), inner Clinical Genetics, Institute of Primary ciliary dyskinesia (PCD) is a rare genetically dynein arms (IDAs), nexin-dynein regulatory Human Genetics, Polish Academy of Sciences, Poznań, heterogeneous disorder caused by the abnormal complexes (N-DRCs), radial spokes (RSs)); Poland structure and/or function of motile cilia. The PCD found on the apical surface of epithelial cells in 2International Institute of diagnosis is challenging and requires a well-described the airways (respiratory cilia), brain (ependymal Molecular and Cell Biology, clinical phenotype combined with the identification of cilia), female reproductive system (cilia in fallo- Warsaw, Poland abnormalities in ciliary ultrastructure and/or beating pian tube) or in male reproductive system (sperm fl 5–8 Correspondence to pattern as well as the recognition of genetic cause of agella); Dr Małgorzata Kurkowiak, the disease. Regarding the pace of identification of PCD- ▸ motile cilia with the 9+0 pattern (they lack CP Department of Molecular and related genes, a rapid acceleration during the last but still contain ODAs and IDAs); found in the Clinical Genetics, Institute of 2–3 years is notable. This is the result of new embryo (nodal cilia);910 Human Genetics, Polish technologies, such as whole-exome sequencing, that ▸ non-motile cilia with the 9+2 pattern; found in Academy of Sciences, 32 11 Strzeszyńska Street, Poznań have been recently applied in genetic research. To date, the inner ear (kinocilia); 60-479, Poland; PCD-causative mutations in 29 genes are known and the ▸ non-motile cilia with the 9+0 pattern (no CP [email protected] number of causative genes is bound to rise. Even though and associated structures), acting mainly as the genetic causes of approximately one-third of PCD mechanosensor and chemosensors; they are Received 31 August 2014 12 13 Accepted 8 October 2014 cases still remain to be found, the current knowledge present in kidney (renal cilia), bile duct can already be used to create new, accurate genetic (cholangiocyte cilia),14 pancreas (cilia in pancre- tests for PCD that can accelerate the correct diagnosis atic duct),15 bone or cartilage (cilia in osteocyte and reduce the proportion of unexplained cases. This or chondrocyte)16 17 or in the eye (photorecep- review aims to present the latest data on the relations tor connecting cilia).18 between ciliary structure aberrations and their genetic The ultrastructural elements of cilia are com- basis. posed of many proteins; their definition in human cilia is largely based on the information from Chlamydomonas reinhardtii, a unicellular biflagel- CILIARY STRUCTURE AND PRIMARY CILIARY late green alga.19 A broad knowledge on the func- DYSKINESIA tion of flagellar proteins could be used in the Cilia and flagella are highly evolutionary conserved studies of ciliary proteins thanks to the high evolu- organelles present on the variety of eukaryotic tionary conservation of these organelles. http://jmg.bmj.com/ cells. Axoneme, the core of the cytoskeletal struc- Each peripheral doublet consists of MT A and ture of cilia and flagella, emanates from the basal MT B, built of 13 and 11 protofilaments, respect- body, which is necessary for anchoring the cilium ively; protofilaments are composed of α and β to the apical side of the cell.1 Cilia and flagella are tubulin heterodimers. The MTs A and B of the continuously assembled and disassembled at their neighbouring peripheral doublets interconnect with distal tips. Intraflagellar transport is essential for each other by the N-DRC. From each MT A, ODAs the transport of flagellar/ciliary components from and IDAs extend; both are large force-producing on September 25, 2021 by guest. Protected copyright. the basal body to their assembly region and for the multiprotein complexes (molecular motors).20 removal of turnover products from the flagellar/ ODA complexes face towards the boundary of the ciliary tip. Anterograde (base-to-tip) transport with cilium while IDA complexes are directed towards the heterotrimeric kinesin-2 and retrograde the CP. The peripheral doublets are connected to (tip-to-base) transport with the cytoplasmic dynein the CP via RSs. The CP complex, RSs, IDA iso- – occur at a constant rate without pauses.2 4 forms f (figure 1) and N-DRC are important for – The axoneme consists of microtubule (MT) the coordination of the dynein motor activity.21 23 doublets (figure 1) associated with the large All these components, except ODA, are distributed number of multiprotein components. In humans, with the 96 nm periodicity along the axoneme. axonemes with either 9+2 or 9+0 microtubular ODAs are repeated every 24 nm; in addition, two pattern identified on cross sections are present. In forms of ODA can be distinguished: proximal the 9+2 cilia, nine peripheral MT doublets sur- (characterised by the presence of two heavy dynein round a central pair (CP) of MTs, while in the 9+0 chains, DNAH5 and DNAH9) and distal, which do cilia no CP is present. Cilia can be divided into two not contain DNAH9.24 major groups: motile and non-motile (primary). To cite: Kurkowiak M, Subgroups with different ultrastructural patterns CLINICAL FEATURES AND DIAGNOSIS OF PCD Ziętkiewicz E, Witt M. J Med Genet Published Online First: can be distinguished depending on the structure A wide range of different functions played by cilia [please include Day Month and function they perform: present on nearly all types of vertebrate cells under- Year] doi:10.1136/ ▸ motile cilia with the 9+2 pattern (nine periph- lies their importance in the functioning of the jmedgenet-2014-102755 eral microtubular doublets, CP and associated organism. Symptoms triggered by dysfunctional Kurkowiak M, et al. J Med Genet 2014;0:1–9. doi:10.1136/jmedgenet-2014-102755 1 Copyright Article author (or their employer) 2014. Produced by BMJ Publishing Group Ltd under licence. Review J Med Genet: first published as 10.1136/jmedgenet-2014-102755 on 28 October 2014. Downloaded from Figure 1 Schematic diagram of the ciliary axoneme in Chlamydomonas. Upper left: longitudinal section of a cilium presenting the location of axonemal microtubules in different parts of the cilium. Red line indicates the site of a cross section presented on the right site. The cross section shows nine microtubule doublets surrounding the central pair of microtubules. The microtubules are interconnected via radial spokes, N-DRCs and dynein arms; no dynein arms are present in the transition region. All these structures except ODA are distributed with the 96 nm periodicity along the axoneme; ODA are present every 24 nm. The placement of all these structures in relation to each other within the 96 nm repeat is depicted at the bottom. a/d, b/g, c and e, single-headed IDA isoforms; fα and fβ, double-headed IDA isoform f; IC/LC, intermediate chain-light chain complex of inner dynein arms (IDA); Mt A, microtubule A; Mt B, microtubule B; N-DRC, nexin-dynein regulatory complex; ODA, outer dynein arms with marked α, β and γ heavy chains; RS1, radial spoke 1, RS2; radial spoke 2; RS3S, radial spoke 3 stump. Scheme based on the original data published http://jmg.bmj.com/ previously.98 cilia form a broad and phenotypically heterogeneous category bronchiectasis or chronic lung disease.31 32 PCD symptoms of overlapping disorders, commonly named ciliopathies. involve organs where motility of cilia has an impact on their Primary ciliary dyskinesia (PCD, OMIM id: 242650), a rare, normal functioning. The most prominent PCD features relate to genetically heterogeneous autosomal-recessive disease, is the the upper and lower respiratory tract and usually appear early major ciliopathy related to the dysfunction of motile cilia. The after birth. Those symptoms include neonatal respiratory dis- on September 25, 2021 by guest. Protected copyright. incidence of PCD is estimated at 1:10 000–1:20 000 live tress syndrome, which comprises chest congestion, coughing, births.25 26 Extrapolating these data, approximately 70 new tachypnoea (rapid breathing) and hypoxia.31 32 In cases where cases can be born each year in the white population dextrocardia, situs ambiguous or situs inversus are present in worldwide.27 the infant, PCD should be considered as a highly possible diag- The history of PCD dates back to 1904 when nosis.33 34 Later, chronic sinusitis and secretory otitis media Dr A. K. Siewert reported the coexistence of bronchiectasis and might occur, which, together with chronic middle ear effusion, – situs inversus.28 A few decades later, in 1933, Manes Kartagener frequently lead to hearing loss.35 37 There are also lower described multiple cases with bronchiectasis, situs inversus and respiratory tract symptoms like wheezing, chronic wet cough sinusitis and named this disorder the Kartagener syndrome.29 frequently with sputum production, chronic bronchitis and Then in 1976, Björn Afzelius, using transmission electron recurrent pneumonia; after several years these symptoms may microscopy (TEM), identified an absence of dynein arms in the lead to bronchiectasis in the middle and lower lobes.27 Upper axoneme of respiratory cilia and sperm flagella in patients with respiratory tract abnormalities include persistent rhinitis, Kartagener syndrome. He concluded that the observed lack of mucosal congestion, nasal passages oedema and infrequently dynein arms must be the cause of ciliary immotility leading to (more prevalent in adults) nasal polyps.38 In older children and all symptoms of Kartagener syndrome including male infertility adults, chronic and recurrent sinusitis as well as chronic muco- due to azoospermia.30 purulent sputum production are common features.
Recommended publications
  • Educational Paper Ciliopathies
    Eur J Pediatr (2012) 171:1285–1300 DOI 10.1007/s00431-011-1553-z REVIEW Educational paper Ciliopathies Carsten Bergmann Received: 11 June 2011 /Accepted: 3 August 2011 /Published online: 7 September 2011 # The Author(s) 2011. This article is published with open access at Springerlink.com Abstract Cilia are antenna-like organelles found on the (NPHP) . Ivemark syndrome . Meckel syndrome (MKS) . surface of most cells. They transduce molecular signals Joubert syndrome (JBTS) . Bardet–Biedl syndrome (BBS) . and facilitate interactions between cells and their Alstrom syndrome . Short-rib polydactyly syndromes . environment. Ciliary dysfunction has been shown to Jeune syndrome (ATD) . Ellis-van Crefeld syndrome (EVC) . underlie a broad range of overlapping, clinically and Sensenbrenner syndrome . Primary ciliary dyskinesia genetically heterogeneous phenotypes, collectively (Kartagener syndrome) . von Hippel-Lindau (VHL) . termed ciliopathies. Literally, all organs can be affected. Tuberous sclerosis (TSC) . Oligogenic inheritance . Modifier. Frequent cilia-related manifestations are (poly)cystic Mutational load kidney disease, retinal degeneration, situs inversus, cardiac defects, polydactyly, other skeletal abnormalities, and defects of the central and peripheral nervous Introduction system, occurring either isolated or as part of syn- dromes. Characterization of ciliopathies and the decisive Defective cellular organelles such as mitochondria, perox- role of primary cilia in signal transduction and cell isomes, and lysosomes are well-known
    [Show full text]
  • Ciliopathiesneuromuscularciliopathies Disorders Disorders Ciliopathiesciliopathies
    NeuromuscularCiliopathiesNeuromuscularCiliopathies Disorders Disorders CiliopathiesCiliopathies AboutAbout EGL EGL Genet Geneticsics EGLEGL Genetics Genetics specializes specializes in ingenetic genetic diagnostic diagnostic testing, testing, with with ne nearlyarly 50 50 years years of of clinical clinical experience experience and and board-certified board-certified labor laboratoryatory directorsdirectors and and genetic genetic counselors counselors reporting reporting out out cases. cases. EGL EGL Genet Geneticsics offers offers a combineda combined 1000 1000 molecular molecular genetics, genetics, biochemical biochemical genetics,genetics, and and cytogenetics cytogenetics tests tests under under one one roof roof and and custom custom test testinging for for all all medically medically relevant relevant genes, genes, for for domestic domestic andand international international clients. clients. EquallyEqually important important to to improving improving patient patient care care through through quality quality genetic genetic testing testing is is the the contribution contribution EGL EGL Genetics Genetics makes makes back back to to thethe scientific scientific and and medical medical communities. communities. EGL EGL Genetics Genetics is is one one of of only only a afew few clinical clinical diagnostic diagnostic laboratories laboratories to to openly openly share share data data withwith the the NCBI NCBI freely freely available available public public database database ClinVar ClinVar (>35,000 (>35,000 variants variants on on >1700 >1700 genes) genes) and and is isalso also the the only only laboratory laboratory with with a a frefree oen olinnlein dea dtabtaabsaes (eE m(EVmCVlaCslas)s,s f)e, afetuatruinrgin ag vaa vraiarniatn ctl acslasisfiscifiactiaotino sne saercahrc ahn adn rde rpeoprot rrte rqeuqeuset sint tinetrefarcfaec, ew, hwichhic fha cfailcitialiteatse rsa praidp id interactiveinteractive curation curation and and reporting reporting of of variants.
    [Show full text]
  • Accuracy of Immunofluorescence in the Diagnosis of Primary Ciliary Dyskinesia
    View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by UCL Discovery Accuracy of immunofluorescence in the diagnosis of Primary Ciliary Dyskinesia Amelia Shoemark1,2, Emily Frost 1, Mellisa Dixon 1, Sarah Ollosson 1, Kate Kilpin1, Andrew V Rogers 1 , Hannah M Mitchison3, Andrew Bush1,2, Claire Hogg1 1 Department of Paediatrics, Royal Brompton & Harefield NHS Trust, London, UK 2 National Heart and Lung Institute, Imperial College London, UK 3 Genetics and Genomic Medicine Programme, Institute of Child Health, University College London, UK Correspondence to: Amelia Shoemark Primary Ciliary Dyskinesia Service Electron microscopy unit Department of Paediatrics Royal Brompton Hospital London SW3 6NP Statement of contribution: AS, CH and AB designed the study. EF, KK, SO and AS consented patients, conducted light microscopy, collected nasal brushings and prepared slides. EF and AS conducted IF staining and analysis. MD conducted light and electron microscopy. HM provided genotyping. AS and EF analysed the data. AS, CH and AB drafted the manuscript. All authors contributed to manuscript drafts and preparation. AS is custodian of the data and takes responsibility for its accuracy. Sources of support: This project is funded by a NIHR fellowship awarded to AS and mentored by CH, HM and AB. AB was supported by the NIHR Respiratory Disease Biomedical Research Unit at the Royal Brompton and Harefield NHS Foundation Trust and Imperial College London Running head: Immunofluorescence in PCD diagnosis Descriptor number:14.6 Rare paediatric lung disease Word count (excluding abstract and references): 2872 At a Glance Commentary: Scientific Knowledge on the Subject Primary Ciliary Dyskinesia is a genetically heterogeneous chronic condition.
    [Show full text]
  • Translational Activity of the Splicing Factor SRSF1 Is Required for Development and Cilia Function
    bioRxiv preprint doi: https://doi.org/10.1101/2020.09.04.263251; this version posted September 4, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Haward, Maslon, Yeyati et al. Translational activity of the splicing factor SRSF1 is required for development and cilia function Fiona Haward,1,5,6 Magdalena M. Maslon,1,6 Patricia L. Yeyati,1,6 Nicolas Bellora,2 Jan N. Hansen,3 Stuart Aitken,1 Jennifer Lawson,1 Alex von Kriegsheim,4 Dagmar Wachten,3 Pleasantine Mill,1,* Ian R. Adams1,* and Javier F. Cáceres1,7,* 1MRC Human Genetics Unit, Institute of Genetics and Molecular Medicine, University of Edinburgh, Crewe Road South, Edinburgh EH4 2XU, UK 2IPATEC, ConseJo Nacional de Investigaciones, Científicas y Técnicas (CONICET)- Universidad Nacional del Comahue, 8400, Bariloche, Argentina. 3Institute of Innate Immunity, Biophysical Imaging, Medical Faculty, University of Bonn, Bonn, Germany 4Edinburgh Cancer Research UK Centre, Institute of Genetics and Molecular Medicine, University of Edinburgh, Crewe Road South, Edinburgh EH4 2XU, UK 5Present address: Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dundee DD1 5EH, UK 6These authors contributed equally to this work 7Lead contact *Correspondence: [email protected]; [email protected]; [email protected] Running title: Nucleo-cytoplasmic shuttling of SR proteins [Key Words: SR proteins; SRSF1; alternative splicing; mRNA translation; cilia] 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.09.04.263251; this version posted September 4, 2020.
    [Show full text]
  • Ciliopathies Gene Panel
    Ciliopathies Gene Panel Contact details Introduction Regional Genetics Service The ciliopathies are a heterogeneous group of conditions with considerable phenotypic overlap. Levels 4-6, Barclay House These inherited diseases are caused by defects in cilia; hair-like projections present on most 37 Queen Square cells, with roles in key human developmental processes via their motility and signalling functions. Ciliopathies are often lethal and multiple organ systems are affected. Ciliopathies are London, WC1N 3BH united in being genetically heterogeneous conditions and the different subtypes can share T +44 (0) 20 7762 6888 many clinical features, predominantly cystic kidney disease, but also retinal, respiratory, F +44 (0) 20 7813 8578 skeletal, hepatic and neurological defects in addition to metabolic defects, laterality defects and polydactyly. Their clinical variability can make ciliopathies hard to recognise, reflecting the ubiquity of cilia. Gene panels currently offer the best solution to tackling analysis of genetically Samples required heterogeneous conditions such as the ciliopathies. Ciliopathies affect approximately 1:2,000 5ml venous blood in plastic EDTA births. bottles (>1ml from neonates) Ciliopathies are generally inherited in an autosomal recessive manner, with some autosomal Prenatal testing must be arranged dominant and X-linked exceptions. in advance, through a Clinical Genetics department if possible. Referrals Amniotic fluid or CV samples Patients presenting with a ciliopathy; due to the phenotypic variability this could be a diverse set should be sent to Cytogenetics for of features. For guidance contact the laboratory or Dr Hannah Mitchison dissecting and culturing, with ([email protected]) / Prof Phil Beales ([email protected]) instructions to forward the sample to the Regional Molecular Genetics Referrals will be accepted from clinical geneticists and consultants in nephrology, metabolic, laboratory for analysis respiratory and retinal diseases.
    [Show full text]
  • Establishment of the Early Cilia Preassembly Protein Complex
    Establishment of the early cilia preassembly protein PNAS PLUS complex during motile ciliogenesis Amjad Horania,1, Alessandro Ustioneb, Tao Huangc, Amy L. Firthd, Jiehong Panc, Sean P. Gunstenc, Jeffrey A. Haspelc, David W. Pistonb, and Steven L. Brodyc aDepartment of Pediatrics, Washington University School of Medicine, St. Louis, MO 63110; bDepartment of Cell Biology and Physiology, Washington University School of Medicine, St. Louis, MO 63110; cDepartment of Medicine, Washington University School of Medicine, St. Louis, MO 63110; and dDepartment of Medicine, University of Southern California, Keck School of Medicine, Los Angeles, CA 90033 Edited by Kathryn V. Anderson, Sloan Kettering Institute, New York, NY, and approved December 27, 2017 (received for review September 9, 2017) Motile cilia are characterized by dynein motor units, which preas- function of these proteins is unknown; however, missing dynein semble in the cytoplasm before trafficking into the cilia. Proteins motor complexes in the cilia of mutants and cytoplasmic locali- required for dynein preassembly were discovered by finding human zation (or absence in the cilia proteome) suggest a role in the mutations that result in absent ciliary motors, but little is known preassembly of dynein motor complexes. Studies in C. reinhardtii about their expression, function, or interactions. By monitoring show motor components in the cell body before transport to ciliogenesis in primary airway epithelial cells and MCIDAS-regulated flagella (22–25). However, the expression, interactions, and induced pluripotent stem cells, we uncovered two phases of expres- functions of preassembly proteins, as well as the steps required sion of preassembly proteins. An early phase, composed of HEATR2, for preassembly, are undefined.
    [Show full text]
  • NME8 Rs2718058 Polymorphism with Alzheimer's Disease Risk
    www.impactjournals.com/oncotarget/ Oncotarget, Vol. 7, No. 24 Research Paper NME8 rs2718058 polymorphism with Alzheimer’s disease risk: a replication and meta-analysis Shu-Lei Liu1, Xue-Chun Wang2, Meng-Shan Tan1, Hui-Fu Wang1, Wei Zhang1, Zi-Xuan Wang1, Jin-Tai Yu1, Lan Tan1 1Department of Neurology, Qingdao Municipal Hospital, School of Medicine, Qingdao University, Qingdao, PR China 2Department of Radiology, Qingdao Municipal Hospital, School of Medicine, Qingdao University, Qingdao, PR China Correspondence to: Lan Tan, email: [email protected] Jin-Tai Yu, email: [email protected] Keywords: NME8, Alzheimer’s disease, association study, polymorphism, meta-analysis Received: March 01, 2016 Accepted: April 11, 2016 Published: April 28, 2016 ABSTRACT Recently, a large meta-analysis of five genome wide association studies (GWAS) has identified that a novel single nucleotide polymorphism (SNP) rs2718058, adjacent to gene NME8 on chromosome 7p14.1, was associated with late-onset Alzheimer’s disease (LOAD) in Caucasians. However, the effect of rs2718058 on other populations remains unclear. In order to explore the relationship between rs2718058 and LOAD risk in a North Han Chinese population, we recruited 984 LOAD cases and 1354 healthy controls that matched for sex and age in this study. The results showed no significant differences in the genotypic or allelic distributions of rs2718058 polymorphism between LOAD cases and healthy controls, even though after stratification forAPOE ε4 status and statistical adjustment for age, gender and APOE ε4 status (p > 0.05). However, a meta-analysis conducted in a sample of 82513 individuals confirmed a significant association between SNP rs2718058 and LOAD risk (OR = 1.08, 95%CI = 1.05–1.11) in the whole population.
    [Show full text]
  • Next Generation Massively Parallel Sequencing of Targeted
    ARTICLE Next generation massively parallel sequencing of targeted exomes to identify genetic mutations in primary ciliary dyskinesia: Implications for application to clinical testing Jonathan S. Berg, MD, PhD1,2, James P. Evans, MD, PhD1,2, Margaret W. Leigh, MD3, Heymut Omran, MD4, Chris Bizon, PhD5, Ketan Mane, PhD5, Michael R. Knowles, MD2, Karen E. Weck, MD1,6, and Maimoona A. Zariwala, PhD6 Purpose: Advances in genetic sequencing technology have the potential rimary ciliary dyskinesia (PCD) is an autosomal recessive to enhance testing for genes associated with genetically heterogeneous Pdisorder involving abnormalities of motile cilia, resulting in clinical syndromes, such as primary ciliary dyskinesia. The objective of a range of manifestations including situs inversus, neonatal this study was to investigate the performance characteristics of exon- respiratory distress at full-term birth, recurrent otitis media, capture technology coupled with massively parallel sequencing for chronic sinusitis, chronic bronchitis that may result in bronchi- 1–3 clinical diagnostic evaluation. Methods: We performed a pilot study of ectasis, and male infertility. The disorder is genetically het- four individuals with a variety of previously identified primary ciliary erogeneous, rendering molecular diagnosis challenging given dyskinesia mutations. We designed a custom array (NimbleGen) to that mutations in nine different genes (DNAH5, DNAH11, capture 2089 exons from 79 genes associated with primary ciliary DNAI1, DNAI2, KTU, LRRC50, RSPH9, RSPH4A, and TX- dyskinesia or ciliary function and sequenced the enriched material using NDC3) account for only approximately 1/3 of PCD cases.4 the GS FLX Titanium (Roche 454) platform. Bioinformatics analysis DNAH5 and DNAI1 account for the majority of known muta- was performed in a blinded fashion in an attempt to detect the previ- tions, and the other genes each account for a small number of ously identified mutations and validate the process.
    [Show full text]
  • Aneuploidy: Using Genetic Instability to Preserve a Haploid Genome?
    Health Science Campus FINAL APPROVAL OF DISSERTATION Doctor of Philosophy in Biomedical Science (Cancer Biology) Aneuploidy: Using genetic instability to preserve a haploid genome? Submitted by: Ramona Ramdath In partial fulfillment of the requirements for the degree of Doctor of Philosophy in Biomedical Science Examination Committee Signature/Date Major Advisor: David Allison, M.D., Ph.D. Academic James Trempe, Ph.D. Advisory Committee: David Giovanucci, Ph.D. Randall Ruch, Ph.D. Ronald Mellgren, Ph.D. Senior Associate Dean College of Graduate Studies Michael S. Bisesi, Ph.D. Date of Defense: April 10, 2009 Aneuploidy: Using genetic instability to preserve a haploid genome? Ramona Ramdath University of Toledo, Health Science Campus 2009 Dedication I dedicate this dissertation to my grandfather who died of lung cancer two years ago, but who always instilled in us the value and importance of education. And to my mom and sister, both of whom have been pillars of support and stimulating conversations. To my sister, Rehanna, especially- I hope this inspires you to achieve all that you want to in life, academically and otherwise. ii Acknowledgements As we go through these academic journeys, there are so many along the way that make an impact not only on our work, but on our lives as well, and I would like to say a heartfelt thank you to all of those people: My Committee members- Dr. James Trempe, Dr. David Giovanucchi, Dr. Ronald Mellgren and Dr. Randall Ruch for their guidance, suggestions, support and confidence in me. My major advisor- Dr. David Allison, for his constructive criticism and positive reinforcement.
    [Show full text]
  • Transmission Distortion and Genetic Incompatibilities Between Alleles in A
    bioRxiv preprint doi: https://doi.org/10.1101/2021.06.09.447720; this version posted June 10, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Transmission distortion and genetic incompatibilities between alleles in a 2 multigenerational mouse advanced intercross line 3 Danny Arends, [email protected], Albrecht Daniel Thaer-Institut für Agrar- und 4 Gartenbauwissenschaften, Humboldt-Universität zu Berlin, Invalidenstraße 42, D-10115 Berlin, 5 Germany 6 Stefan Kärst, [email protected], Albrecht Daniel Thaer-Institut für Agrar- und 7 Gartenbauwissenschaften, Humboldt-Universität zu Berlin, Invalidenstraße 42, D-10115 Berlin, 8 Germany 9 Sebastian Heise, [email protected], Albrecht Daniel Thaer-Institut für Agrar- und 10 Gartenbauwissenschaften, Humboldt-Universität zu Berlin, Invalidenstraße 42, D-10115 Berlin, 11 Germany 12 Paula Korkuc, [email protected], Albrecht Daniel Thaer-Institut für Agrar- und 13 Gartenbauwissenschaften, Humboldt-Universität zu Berlin, Invalidenstraße 42, D-10115 Berlin, 14 Germany 15 Deike Hesse, [email protected], Albrecht Daniel Thaer-Institut für Agrar- und 16 Gartenbauwissenschaften, Humboldt-Universität zu Berlin, Invalidenstraße 42, D-10115 Berlin, 17 Germany 18 Gudrun A. Brockmann†, [email protected], Albrecht Daniel Thaer-Institut für Agrar- 19 und Gartenbauwissenschaften, Humboldt-Universität zu Berlin, Invalidenstraße 42, D-10115 Berlin, 20 Germany 21 † To whom correspondence should be addressed. 1 bioRxiv preprint doi: https://doi.org/10.1101/2021.06.09.447720; this version posted June 10, 2021.
    [Show full text]
  • Ciliary Dyneins and Dynein Related Ciliopathies
    cells Review Ciliary Dyneins and Dynein Related Ciliopathies Dinu Antony 1,2,3, Han G. Brunner 2,3 and Miriam Schmidts 1,2,3,* 1 Center for Pediatrics and Adolescent Medicine, University Hospital Freiburg, Freiburg University Faculty of Medicine, Mathildenstrasse 1, 79106 Freiburg, Germany; [email protected] 2 Genome Research Division, Human Genetics Department, Radboud University Medical Center, Geert Grooteplein Zuid 10, 6525 KL Nijmegen, The Netherlands; [email protected] 3 Radboud Institute for Molecular Life Sciences (RIMLS), Geert Grooteplein Zuid 10, 6525 KL Nijmegen, The Netherlands * Correspondence: [email protected]; Tel.: +49-761-44391; Fax: +49-761-44710 Abstract: Although ubiquitously present, the relevance of cilia for vertebrate development and health has long been underrated. However, the aberration or dysfunction of ciliary structures or components results in a large heterogeneous group of disorders in mammals, termed ciliopathies. The majority of human ciliopathy cases are caused by malfunction of the ciliary dynein motor activity, powering retrograde intraflagellar transport (enabled by the cytoplasmic dynein-2 complex) or axonemal movement (axonemal dynein complexes). Despite a partially shared evolutionary developmental path and shared ciliary localization, the cytoplasmic dynein-2 and axonemal dynein functions are markedly different: while cytoplasmic dynein-2 complex dysfunction results in an ultra-rare syndromal skeleto-renal phenotype with a high lethality, axonemal dynein dysfunction is associated with a motile cilia dysfunction disorder, primary ciliary dyskinesia (PCD) or Kartagener syndrome, causing recurrent airway infection, degenerative lung disease, laterality defects, and infertility. In this review, we provide an overview of ciliary dynein complex compositions, their functions, clinical disease hallmarks of ciliary dynein disorders, presumed underlying pathomechanisms, and novel Citation: Antony, D.; Brunner, H.G.; developments in the field.
    [Show full text]
  • IFM) Analysis of Primary Ciliary Dyskinesia (PCD) Patients with Suspected Inner Dynein Arm Defects (IDA
    Hjeij et al. Cilia 2012, 1(Suppl 1):P23 http://www.ciliajournal.com/content/1/S1/P23 POSTERPRESENTATION Open Access Immunofluorescence microscopy (IFM) analysis of primary ciliary dyskinesia (PCD) patients with suspected inner dynein arm defects (IDA) R Hjeij1*, NT Loges1, A Becker-Heck2, H Omran1 From First International Cilia in Development and Disease Scientific Conference (2012) London, UK. 16-18 May 2012 Primary ciliary dyskinesia (PCD), characterized by abnor- Author details 1Universitätsklinikum Münster, Germany. 2Department of Pediatrics, University mal motility of cilia or flagella, is caused by defects of Hospital Freiburg, Germany. structural components such as inner dynein arms (IDAs). Recently high-speed videomicroscopy has substituted Published: 16 November 2012 transmission electron microscopy (TEM) analysis as the “gold standard” for diagnosis. However, TEM is still the most widely used diagnostic tool in many countries. A doi:10.1186/2046-2530-1-S1-P23 Cite this article as: Hjeij et al.: Immunofluorescence microscopy (IFM) recent study reported that isolated IDA defects is the most analysis of primary ciliary dyskinesia (PCD) patients with suspected frequent (> 50%) ciliary defect in PCD, as detected by inner dynein arm defects (IDA). Cilia 2012 1(Suppl 1):P23. TEM (Theegarten, 2011). IFM analysis has shown in several studies that it can ascertain diagnosis such as in PCD variants caused by DNAH5, DNAI1, DNAI2, KTU, LRRC50, CCDC39 and CCDC40 mutations. IFM can pro- vide a complete view of the ciliary axoneme and identify “partial” axonemal defects which may be misinterpreted by TEM (e.g. present in KTU mutant cilia). Here we per- formed IFM analysis of known PCD patients to identify the composition of dynein arm defects, including IDAs.
    [Show full text]