The Genus Fragaria in Croatia
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Characteristics of Fragaria Vesca Yield Parameters and Anthocyanin Accumulation Under Water Deficit Stress
plants Article Characteristics of Fragaria vesca Yield Parameters and Anthocyanin Accumulation under Water Deficit Stress Rytis Rugienius 1,* , Vidmantas Bendokas 1 , Tadeusas Siksnianas 1, Vidmantas Stanys 1, Audrius Sasnauskas 1 and Vaiva Kazanaviciute 2 1 Lithuanian Research Centre for Agriculture and Forestry, Department of Orchard Plant Genetics and Biotechnology, Institute of Horticulture, LT-54333 Babtai, Lithuania; [email protected] (V.B.); [email protected] (T.S.); [email protected] (V.S.); [email protected] (A.S.) 2 Department of Eukaryote Gene Engineering, Institute of Biotechnology, Vilnius University, LT-10257 Vilnius, Lithuania; [email protected] * Correspondence: [email protected]; Tel.: +370-37-555253 Abstract: Plants exposed to drought stress conditions often increase the synthesis of anthocyanins—natural plant pigments and antioxidants. However, water deficit (WD) often causes significant yield loss. The aim of our study was to evaluate the productivity as well as the anthocyanin content and composition of berries from cultivated Fragaria vesca “Rojan” and hybrid No. 17 plants (seedlings) grown under WD. The plants were grown in an unheated greenhouse and fully irrigated (control) or irrigated at 50% and 25%. The number of berries per plant and the berry weight were evaluated every 4 days. The anthocyanin content and composition of berries were evaluated with the same periodicity using HPLC. The effect of WD on the yield parameters of two evaluated F. vesca genotypes differed depending on the harvest time. The cumulative yield of plants under WD was not less Citation: Rugienius, R.; Bendokas, V.; Siksnianas, T.; Stanys, V.; Sasnauskas, than that of the control plants for 20–24 days after the start of the experiment. -
Kim E. Hummer USDA ARS National Clonal Germplasm Repository 33447 Peoria Road Corvallis, Oregon 97333-2521 U.S.A
A new species of Fragaria (Rosaceae) from Oregon Kim E. Hummer USDA ARS National Clonal Germplasm Repository 33447 Peoria Road Corvallis, Oregon 97333-2521 U.S.A. [email protected] ABSTRACT Fragaria cascadensis K.E. Hummer, sp. nov. is endemic to the western high Cascade Mountain Range in Oregon, United States. This deca- ploid species can be distinguished by adaxial leaf hairs, distal tooth of the terminal leaflet always smaller than adjacent teeth, and comma- shaped achenes. Its known range is in the western Cascade Mountains from the Columbia River in the north, to the vicinity of Crater Lake in the south, at elevations of 1,000 to 3,800 m, in sandy-clay loams of volcanic origin, in forest clearings and open meadows. RESUMEN Fragaria cascadensis K.E. Hummer, sp. nov. es endémica de la Cordillera de las Cascadas en Oregón, Estados Unidos. Esta especie deca- ploide puede diferenciarse por los pelos del envés de las hojas, diente distal del foliolo terminal siempre más pequeño que los dientes adya- centes, y los aquenios en forma de coma. Su rango conocido va del oeste de la Cordillera de las Cascadas desde el río Columbia en el norte, a las proximidades del Crater Lake en el sur, a elevaciones de 1,000 a 3,800 m, en margas arenoso-calcáreas de origen volcánico, en claros de bosque y en parados abiertos. DESCRIPTION Fragaria cascadensis Hummer, sp. nov. (Figs. 1–3). TYPE: U.S.A. OREGON. Lane Co.: US NFDR 5897, southern exposure, dis- turbed area at forest edge, along roadside ditch, altitude 1433 m, with Pseudotsuga menziesii, 8 Aug 2011, K.E. -
Taxonomic Review of the Genus Rosa
REVIEW ARTICLE Taxonomic Review of the Genus Rosa Nikola TOMLJENOVIĆ 1 ( ) Ivan PEJIĆ 2 Summary Species of the genus Rosa have always been known for their beauty, healing properties and nutritional value. Since only a small number of properties had been studied, attempts to classify and systematize roses until the 16th century did not give any results. Botanists of the 17th and 18th century paved the way for natural classifi cations. At the beginning of the 19th century, de Candolle and Lindley considered a larger number of morphological characters. Since the number of described species became larger, division into sections and subsections was introduced in the genus Rosa. Small diff erences between species and the number of transitional forms lead to taxonomic confusion and created many diff erent classifi cations. Th is problem was not solved in the 20th century either. In addition to the absence of clear diff erences between species, the complexity of the genus is infl uenced by extensive hybridization and incomplete sorting by origin, as well as polyploidy. Diff erent analytical methods used along with traditional, morphological methods help us clarify the phylogenetic relations within the genus and give a clearer picture of the botanical classifi cation of the genus Rosa. Molecular markers are used the most, especially AFLPs and SSRs. Nevertheless, phylogenetic relationships within the genus Rosa have not been fully clarifi ed. Th e diversity of the genus Rosa has not been specifi cally analyzed in Croatia until now. Key words Rosa sp., taxonomy, molecular markers, classifi cation, phylogeny 1 Agricultural School Zagreb, Gjure Prejca 2, 10040 Zagreb, Croatia e-mail: [email protected] 2 University of Zagreb, Faculty of Agriculture, Department of Plant Breeding, Genetics and Biometrics, Svetošimunska cesta 25, 10000 Zagreb, Croatia Received: November , . -
Diversity of Volatile Patterns in Sixteen Fragaria Vesca L. Accessions in Comparison to Cultivars of Fragaria ×Ananassa D
Journal of Applied Botany and Food Quality 86, 37 - 46 (2013), DOI:10.5073/JABFQ.2013.086.006 1Julius Kühn-Institute (JKI), Federal Research Centre for Cultivated Plants, Institute for Ecological Chemistry, Plant Analysis and Stored Product Protection, Quedlinburg, Germany 2Hansabred GmbH & Co. KG, Dresden, Germany Diversity of volatile patterns in sixteen Fragaria vesca L. accessions in comparison to cultivars of Fragaria ×ananassa D. Ulrich1*, K. Olbricht 2 (Received April 4, 2013) Summary of the latter was described as much more sweetish-aromatic than those of the F. ×ananassa cultivars but with some astringent and Fragaria vesca is the most distributed wild species in the genus bitter impressions (ULRICH et al., 2007). F. vesca is characterized by Fragaria. Due to this biogeography, a high diversity is to expect. outstanding flowery notes like violet and acacia. But especially in During two harvest seasons, sixteen accessions from different lo- the white mutant F. vesca f. alba (Ehrh.) Staudt, these impressions cations from the most eastern habitat at Lake Baikal in Siberia, from sometimes were described by the testers with negative statements Middle and Southern Europe and Northern Europe with Scandinavia like over-aromatic and perfume-like. By gas chromatography- and Iceland were investigated as well as two of the three described olfactometry (GCO) experiments, the flowery impressions were North American subspecies and three F. vesca cultivars. Five very assigned to the content of the aromatic ester methyl anthranilate distinct European F. ×ananassa cultivars were chosen to serve as a whereas the herbaceous impressions are caused by a high content comparison. Beside brix value and acid contents, the aroma patterns of terpenoids. -
Sex-Allocation Plasticity in Hermaphrodites of Sexually Dimorphic Fragaria Virginiana (Rosaceae)
231 Sex-allocation plasticity in hermaphrodites of sexually dimorphic Fragaria virginiana (Rosaceae) Eric J. Bishop, Rachel B. Spigler, and Tia-Lynn Ashman Abstract: Sex-allocation plasticity is thought to play an important role in the evolution of separate sexes in plants. Ac- cordingly, much attention has been paid to environmentally induced variation in fruit and seed production in sexually di- morphic species, but we know little about whether this variation arises as a direct response to environmental variation or is instead an indirect consequence of changes in plant size. In this study, we characterize sex-allocation plasticity across a resource gradient for several reproductive traits in hermaphrodites of gyno(sub)dioecious Fragaria virginiana Duch. We find significant plasticity, on average, for flower number, proportion fruit set, ovule number, proportion seed set, and run- ner number in response to resource variation. Plasticity of most traits examined tended to be at least partially independent of variation in plant size, suggesting that it is not simply an indirect consequence of plant allometry. Moreover, we find genetic variation for plasticity of key reproductive traits. Comparisons of relative plasticities among traits reveal that F. virginiana hermaphrodites are more likely to adjust female investment via changes in fruit and seed set than ovule num- ber, and most likely to adjust male investment via flower number rather than anther number or pollen per anther, although there is genotypic variation for plasticity in pollen per anther. Evidence of within-population variation can logically be ex- tended to suggest that variation in hermaphrodite sex-expression seen among natural populations of F. -
Genotyping-By-Sequencing in an Orphan Plant Species Physocarpus Opulifolius Helps Identify the Evolutionary Origins of the Genus
Buti et al. BMC Res Notes (2016) 9:268 DOI 10.1186/s13104-016-2069-4 BMC Research Notes SHORT REPORT Open Access Genotyping‑by‑sequencing in an orphan plant species Physocarpus opulifolius helps identify the evolutionary origins of the genus Prunus Matteo Buti1*, Daniel J. Sargent1,3, Khethani G. Mhelembe2, Pietro Delfino1, Kenneth R. Tobutt2 and Riccardo Velasco1 Abstract Background: The Rosaceae family encompasses numerous genera exhibiting morphological diversification in fruit types and plant habit as well as a wide variety of chromosome numbers. Comparative genomics between various Rosaceous genera has led to the hypothesis that the ancestral genome of the family contained nine chromosomes, however, the synteny studies performed in the Rosaceae to date encompass species with base chromosome num- bers x 7 (Fragaria), x 8 (Prunus), and x 17 (Malus), and no study has included species from one of the many Rosaceous= genera containing= a base chromosome= number of x 9. = Results: A genetic linkage map of the species Physocarpus opulifolius (x 9) was populated with sequence char- acterised SNP markers using genotyping by sequencing. This allowed for= the first time, the extent of the genome diversification of a Rosaceous genus with a base chromosome number of x 9 to be performed. Orthologous loci distributed throughout the nine chromosomes of Physocarpus and the eight= chromosomes of Prunus were identified which permitted a meaningful comparison of the genomes of these two genera to be made. Conclusions: The study revealed a high level of macro-synteny between the two genomes, and relatively few chro- mosomal rearrangements, as has been observed in studies of other Rosaceous genomes, lending further support for a relatively simple model of genomic evolution in Rosaceae. -
The History of Genome Mapping in Fragaria Spp
Journal of Horticultural Research 2014, vol. 22(2): 93-103 DOI: 10.2478/johr-2014-0026 _______________________________________________________________________________________________________ THE HISTORY OF GENOME MAPPING IN FRAGARIA SPP. Abdel-Rahman Moustafa Abdel-Wahab MOHAMED1, Tomasz JĘCZ2, Małgorzata KORBIN2* 1Department of Horticulture, Faculty of Agriculture, University of Minia, Egypt 2Department of Horticultural Plant Breeding, Laboratory of Unconventional Breeding Methods Research Institute of Horticulture, Skierniewice, Poland Received: November 25, 2014; Accepted: December 12, 2014 ABSTRACT This overview summarizes the research programs devoted to mapping the genomes within Fragaria genus. A few genetic linkage maps of diploid and octoploid Fragaria species as well as impressive physical map of F. vesca were developed in the last decade and resulted in the collection of data useful for further fundamental and applied studies. The information concerning the rules for proper preparation of mapping population, the choice of markers useful for generating linkage map, the saturation of existing maps with new markers linked to economically important traits, as well as problems faced during mapping process are presented in this paper. Key words: woodland strawberry, cultivated strawberry, linkage, physical map INTRODUCTION artificial chromosome (YAC) cloning vectors. In comparison to a genetic map, providing insights Genome maps, displaying the position of into the relative position of loci on chromosomes, genes along chromosomes within the genome of an the physical map is more “accurate” representation organism, are classified as genetic and physical maps of the genome (Brown 2002). (Brown 2002). In theory, both maps should provide Regardless of the strategy used, the essence of the same information concerning chromosomal as- all mapping approaches is to localise a collection of signment, and the order of loci. -
The Best Paper Ever
Universidade de São Paulo Escola Superior de Agricultura “Luiz de Queiroz” Métodos de conservação pós-colheita de pedúnculos de caju Juliana Tauffer de Paula Tese apresentada para obtenção do título de Doutora em Ciências. Área de concentração: Fitotecnia Piracicaba 2017 Juliana Tauffer de Paula Engenheira Agrônoma Métodos de conservação pós-colheita de pedúnculos de caju Orientador: Prof. Dr. RICARDO ALFREDO KLUGE Tese apresentada para obtenção do título de Doutora em Ciências. Área de concentração: Fitotecnia Piracicaba 2017 3 RESUMO Métodos de conservação pós-colheita de pedúnculos de caju O pedúnculo de caju é um pseudofruto carnoso, suculento, de ótimo aroma, apresenta altos teores de ácido ascórbico e compostos fenólicos. Apesar da condição nutricional, a vida útil e a comercialização in natura do pedúnculo é limitada principalmente devido a sua alta perecibilidade e susceptibilidade ao ataque de microrganismos patogênicos. O objetivo do trabalho foi estudar métodos de conservação pós-colheita de pedúnculos de caju, entre eles: radiação gama, quitosana e atmosfera modificada passiva, de forma primeiramente individual para avaliar o efeito na conservação dos principais atributos físico-químicos, nutricionais e nos aspectos fisiológicos e depois em combinação para verificar efeitos sobre a vida útil, na atividade antioxidante e no perfil de compostos voláteis. No experimento de irradiação a dose de 2,0 kGy reduziu drasticamente a incidência de podridão mas ocasionou alta perdas de firmeza, ácido ascórbico, fenólicos e de pigmentos. A dose de 0,5 kGy proporcionou a melhor qualidade dos pedúnculos, pois além de reduzir podridões, reduziu perda de massa, manteve valores adequados de firmeza e, diferente da maior dose, não interferiu na pigmentação da epiderme, além de manter altos os níveis de compostos fenólicos e reduzir a adstringência. -
A World of Extraordinary Flavors in Specialty and Exotic Strawberries
Market Watch: A world of extraordinary flavors in specialty and exotic strawberries Commercial varieties are bred for firmness and shelf life. But older, more fragile breeds can be intensely aromatic and delicious. If only more growers would produce them. Wild strawberries grown by Pudwill Berry Farms in Nipomo at the Santa Monica farmers market. (David Karp / For The Times / July 1, 2009) By David Karp, Special to the Los Angeles Times April 16, 2010 The mild climate along California's coast enables its strawberry growers to dominate commercial production of this fruit; last year they accounted for some 88% of the nation's crop. For strawberry lovers, that's both a blessing, of abundance and reasonable prices, and a curse, because local growers are focused almost exclusively on varieties suited to industrial production. Compared with other states where local sales predominate, California strawberry breeders prioritize firmness and long shelf life, often at the expense of flavor. Our farmers market growers can offer riper fruit than is harvested for supermarkets, but they are stuck using commercial varieties because no one in California is breeding new varieties suited for direct sales and nurseries, for the most part, don't want to be bothered with older varieties. That's a shame because there's a whole world of different and extraordinary flavors that could await enterprising growers and their customers. Last week, I wrote a buying guide to farmers market strawberries focused on standard varieties from the University of California breeding program. Let us now consider specialty and exotic strawberry varieties, both from farmers markets and further afield. -
Report of a Working Group on Berries
Report of a Working Group on Berries First Meeting, 14-15 January 2020, Dresden, Germany L. Maggioni and V. Bryant REPORT OF A WORKING GROUP ON BERRIES: FIRST MEETING Report of a Working Group on Berries First Meeting, 14-15 January 2020, Dresden, Germany L. Maggioni and V. Bryant REPORT OF A WORKING GROUP ON BERRIES: FIRST MEETING The European Cooperative Programme for Plant Genetic Resources (ECPGR) is a collaborative programme among most European countries aimed at contributing to rationally and effectively conserve ex situ and in situ Plant Genetic Resources for Food and Agriculture, provide access and increase utilization (http://www.ecpgr.cgiar.org). The Programme, which is entirely financed by the member countries, is overseen by a Steering Committee composed of National Coordinators nominated by the participating countries. The Coordinating Secretariat is hosted by The Alliance of Bioversity International and CIAT. The Programme operates through Working Groups composed of pools of experts nominated by the National Coordinators. The ECPGR Working Groups deal with either crops or general themes related to plant genetic resources (documentation and information and in situ and on-farm conservation). Members of the Working Groups carry out activities based on specific ECPGR objectives, using ECPGR funds and/or their own resources. The geographical designations employed and the presentation of material in this publication do not imply the expression of any opinion whatsoever on the part of The Alliance concerning the legal status of any country, territory, city or area or its authorities, or concerning the delimitation of its frontiers or boundaries. Mention of a proprietary name does not constitute endorsement of the product and is given only for information. -
The History of Genome Mapping in Fragaria Spp
Journal of Horticultural Research 2014, vol. 22(2): 93-103 DOI: 10.2478/johr-2014-0026 _______________________________________________________________________________________________________ THE HISTORY OF GENOME MAPPING IN FRAGARIA SPP. Abdel-Rahman Moustafa Abdel-Wahab MOHAMED1, Tomasz JĘCZ2, Małgorzata KORBIN2* 1Department of Horticulture, Faculty of Agriculture, University of Minia, Egypt 2Department of Horticultural Plant Breeding, Laboratory of Unconventional Breeding Methods Research Institute of Horticulture, Skierniewice, Poland Received: November 25, 2014; Accepted: December 12, 2014 ABSTRACT This overview summarizes the research programs devoted to mapping the genomes within Fragaria genus. A few genetic linkage maps of diploid and octoploid Fragaria species as well as impressive physical map of F. vesca were developed in the last decade and resulted in the collection of data useful for further fundamental and applied studies. The information concerning the rules for proper preparation of mapping population, the choice of markers useful for generating linkage map, the saturation of existing maps with new markers linked to economically important traits, as well as problems faced during mapping process are presented in this paper. Key words: woodland strawberry, cultivated strawberry, linkage, physical map INTRODUCTION artificial chromosome (YAC) cloning vectors. In comparison to a genetic map, providing insights Genome maps, displaying the position of into the relative position of loci on chromosomes, genes along chromosomes within the genome of an the physical map is more “accurate” representation organism, are classified as genetic and physical maps of the genome (Brown 2002). (Brown 2002). In theory, both maps should provide Regardless of the strategy used, the essence of the same information concerning chromosomal as- all mapping approaches is to localise a collection of signment, and the order of loci. -
Molecular Phylogenetics and Evolution 66 (2013) 17–29
Molecular Phylogenetics and Evolution 66 (2013) 17–29 Contents lists available at SciVerse ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Insights into phylogeny, sex function and age of Fragaria based on whole chloroplast genome sequencing ⇑ Wambui Njuguna a, , Aaron Liston b, Richard Cronn c, Tia-Lynn Ashman d, Nahla Bassil e a Department of Horticulture, Oregon State University, ALS 4017, Corvallis, OR 97331, USA b Department of Botany and Plant Pathology, Oregon State University, Cordley Hall 2082, Corvallis, OR 97331, USA c Pacific Northwest Research Station, United States Forest Service, 3200 SW Jefferson Way, Corvallis, OR 97331, USA d Department of Biological Sciences, University of Pittsburgh, Pittsburgh, PA 15260, USA e United States Department of Agriculture, Agricultural Research Service, National Clonal Germplasm Repository, Corvallis, OR 97333, USA article info abstract Article history: The cultivated strawberry is one of the youngest domesticated plants, developed in France in the 1700s Received 13 February 2012 from chance hybridization between two western hemisphere octoploid species. However, little is known Revised 20 August 2012 about the evolution of the species that gave rise to this important fruit crop. Phylogenetic analysis of Accepted 30 August 2012 chloroplast genome sequences of 21 Fragaria species and subspecies resolves the western North Ameri- Available online 14 September 2012 can diploid F. vesca subsp. bracteata as sister to the clade of octoploid/decaploid species. No extant tetrap- loids or hexaploids are directly involved in the maternal ancestry of the octoploids. Keywords: There is strong geographic segregation of chloroplast haplotypes in subsp. bracteata, and the gynodioe- Plastome cious Pacific Coast populations are implicated as both the maternal lineage and the source of male-ste- Polyploidy Self-compatibility rility in the octoploid strawberries.