Viral Hepatitis Transmission and Prevention
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Globalization and Infectious Diseases: a Review of the Linkages
TDR/STR/SEB/ST/04.2 SPECIAL TOPICS NO.3 Globalization and infectious diseases: A review of the linkages Social, Economic and Behavioural (SEB) Research UNICEF/UNDP/World Bank/WHO Special Programme for Research & Training in Tropical Diseases (TDR) The "Special Topics in Social, Economic and Behavioural (SEB) Research" series are peer-reviewed publications commissioned by the TDR Steering Committee for Social, Economic and Behavioural Research. For further information please contact: Dr Johannes Sommerfeld Manager Steering Committee for Social, Economic and Behavioural Research (SEB) UNDP/World Bank/WHO Special Programme for Research and Training in Tropical Diseases (TDR) World Health Organization 20, Avenue Appia CH-1211 Geneva 27 Switzerland E-mail: [email protected] TDR/STR/SEB/ST/04.2 Globalization and infectious diseases: A review of the linkages Lance Saker,1 MSc MRCP Kelley Lee,1 MPA, MA, D.Phil. Barbara Cannito,1 MSc Anna Gilmore,2 MBBS, DTM&H, MSc, MFPHM Diarmid Campbell-Lendrum,1 D.Phil. 1 Centre on Global Change and Health London School of Hygiene & Tropical Medicine Keppel Street, London WC1E 7HT, UK 2 European Centre on Health of Societies in Transition (ECOHOST) London School of Hygiene & Tropical Medicine Keppel Street, London WC1E 7HT, UK TDR/STR/SEB/ST/04.2 Copyright © World Health Organization on behalf of the Special Programme for Research and Training in Tropical Diseases 2004 All rights reserved. The use of content from this health information product for all non-commercial education, training and information purposes is encouraged, including translation, quotation and reproduction, in any medium, but the content must not be changed and full acknowledgement of the source must be clearly stated. -
On Confinement and Quarantine Concerns on an SEIAR Epidemic
S S symmetry Article On Confinement and Quarantine Concerns on an SEIAR Epidemic Model with Simulated Parameterizations for the COVID-19 Pandemic Manuel De la Sen 1,* , Asier Ibeas 2 and Ravi P. Agarwal 3 1 Campus of Leioa, Institute of Research and Development of Processes IIDP, University of the Basque Country, 48940 Leioa (Bizkaia), Spain 2 Department of Telecommunications and Systems Engineering, Universitat Autònoma de Barcelona, UAB, 08193 Barcelona, Spain; [email protected] 3 Department of Mathematics, Texas A & M University, 700 Univ Blvd, Kingsville, TX 78363, USA; [email protected] * Correspondence: [email protected] Received: 7 September 2020; Accepted: 30 September 2020; Published: 7 October 2020 Abstract: This paper firstly studies an SIR (susceptible-infectious-recovered) epidemic model without demography and with no disease mortality under both total and under partial quarantine of the susceptible subpopulation or of both the susceptible and the infectious ones in order to satisfy the hospital availability requirements on bed disposal and other necessary treatment means for the seriously infectious subpopulations. The seriously infectious individuals are assumed to be a part of the total infectious being described by a time-varying proportional function. A time-varying upper-bound of those seriously infected individuals has to be satisfied as objective by either a total confinement or partial quarantine intervention of the susceptible subpopulation. Afterwards, a new extended SEIR (susceptible-exposed-infectious-recovered) epidemic model, which is referred to as an SEIAR (susceptible-exposed-symptomatic infectious-asymptomatic infectious-recovered) epidemic model with demography and disease mortality is given and focused on so as to extend the above developed ideas on the SIR model. -
Commentary Disease Transmission Dynamics and the Evolution
Proc. Natl. Acad. Sci. USA Vol. 96, pp. 800–801, February 1999 Commentary Disease transmission dynamics and the evolution of antibiotic resistance in hospitals and communal settings Simon A. Levin*† and Viggo Andreasen‡ *Department of Ecology and Evolutionary Biology, Eno Hall, Princeton University, Princeton NJ 08544; and ‡Department of Mathematics, Roskilde University, DK-4000 Roskilde, Denmark Despite the tremendous benefits of antibiotics for dealing with sally, exercising little influence on their host under normal a wide range of pathogens, there is by now little doubt that conditions. Antibiotics are typically introduced to treat the their indiscriminate use has led to the emergence of novel true pathogens, and for them the problem of resistance resistant strains and a frightening new set of threats to public introduces questions concerning the length and intensity of health. Hospitals and other community settings provide an treatment, multidrug strategies, and patient compliance. (See, especially fertile ground for the spread of those types; in for example, refs. 2–4). Commensals provide a different sort particular, the recent emergence and proliferation of bacteria of problem, however. Under normal conditions, they live in resistant to both methicillin and vancomycin has engendered such places as the skin or upper respiratory tract, causing little serious concern, threatening the effectiveness of the last or no harm. On occasion, however, they become translocated available options for treatment of potentially fatal Staphylo- to sites that are normally sterile, such as the blood or lungs, coccus strains. where they may have serious harmful effects (6). Many viru- It seems clear that a considered and comprehensive strategy lence factors, for example in Staphylococcus aureus, are carried for antibiotic use is essential, permitting the intelligent de- on plasmids, and can be exchanged among different strains. -
Survival of Human Norovirus Surrogates in Juices and Their Inactivation Using Novel Methods
University of Tennessee, Knoxville TRACE: Tennessee Research and Creative Exchange Masters Theses Graduate School 5-2011 Survival of Human Norovirus Surrogates In Juices and their Inactivation Using Novel Methods Katie Marie Horm [email protected] Follow this and additional works at: https://trace.tennessee.edu/utk_gradthes Recommended Citation Horm, Katie Marie, "Survival of Human Norovirus Surrogates In Juices and their Inactivation Using Novel Methods. " Master's Thesis, University of Tennessee, 2011. https://trace.tennessee.edu/utk_gradthes/882 This Thesis is brought to you for free and open access by the Graduate School at TRACE: Tennessee Research and Creative Exchange. It has been accepted for inclusion in Masters Theses by an authorized administrator of TRACE: Tennessee Research and Creative Exchange. For more information, please contact [email protected]. To the Graduate Council: I am submitting herewith a thesis written by Katie Marie Horm entitled "Survival of Human Norovirus Surrogates In Juices and their Inactivation Using Novel Methods." I have examined the final electronic copy of this thesis for form and content and recommend that it be accepted in partial fulfillment of the equirr ements for the degree of Master of Science, with a major in Food Science and Technology. Doris H. D'Souza, Major Professor We have read this thesis and recommend its acceptance: Federico M. Harte, Gina M. Pighetti Accepted for the Council: Carolyn R. Hodges Vice Provost and Dean of the Graduate School (Original signatures are on file with official studentecor r ds.) Survival of Human Norovirus Surrogates In Juices and their Inactivation Using Novel Methods A Thesis Presented for the Master of Science Degree The University of Tennessee, Knoxville Katie Marie Horm May 2011 Acknowledgments I would like to think my major professor/advisor Dr. -
Valacyclovir Reduced Genital Herpes Transmission in Couples Discordant for Herpes Simplex Virus Type 2 Infection Corey L, Wald A, Patel R, Et Al
146 THERAPEUTICS Evid Based Med: first published as 10.1136/ebm.9.5.146 on 30 September 2004. Downloaded from Valacyclovir reduced genital herpes transmission in couples discordant for herpes simplex virus type 2 infection Corey L, Wald A, Patel R, et al. Once-daily valacyclovir to reduce the risk of transmission of genital herpes. N Engl J Med 2004;350:11–20. Clinical impact ratings GP/FP/Primary care wwwwwwq Infectious diseases wwwwwqq ............................................................................................................................... In heterosexual couples who are serologically discordant for herpes simplex virus type 2 (HSV-2) infection, does once Q daily valacyclovir reduce the sexual transmission of genital herpes? METHODS MAIN RESULTS The table shows the results. Design: randomised placebo controlled trial. CONCLUSION In heterosexual couples discordant for herpes simplex virus type 2 infection, valacyclovir reduced transmission of infection. Allocation: concealed.* Commentary Blinding: blinded {participants, healthcare providers, data revious studies have shown that antiviral drugs can reduce the collectors, data analysts, and outcome assessors}À.* frequency of recurrence and subclinical shedding of viral particles.1 Follow up period: 8 months. P This important, large, well designed trial by Corey et al is the first to show an effect on the transmission of HSV-2 infection to an uninfected partner. In this study, the reduction in transmission was limited; 62 partners had Setting: 96 sites in the US, Canada, Europe, Latin America, and to take the drug daily for 8 months to prevent 1 infection, and 57 partners Australia. had to take the drug daily to prevent overall acquisition of HSV-2 infection. 2 independent predictors were found in addition to the drugs: Participants: 1498 couples >18 years who were women as the susceptible partners (hazard ratio [HR] 3.3) and duration immunocompetent, heterosexual, monogamous, in good health, of HSV-2 infection ,2 years (HR 2.9). -
Potential for Transmission of Antimicrobial Resistance In
Report of the Scientific Committee of the Food Safety Authority of Ireland 2015 Potential for Transmission of Antimicrobial Resistance in the Food Chain Report of the Scientific Committee of the Food Safety Authority of Ireland Potential for Transmission of Antimicrobial Resistance in the Food Chain Published by: Food Safety Authority of Ireland Abbey Court, Lower Abbey St Dublin 1 DO1 W2H4 Tel: +353 1 8171300 Fax: +353 1 8171301 [email protected] www.fsai.ie © FSAI 2015 Applications for reproduction should be made to the FSAI Information Unit ISBN 978-1-910348-01-7 Report of the Scientific Committee of the Food Safety Authority of Ireland Potential for Transmission of Antimicrobial Resistance in the Food Chain CONTENTS FOREWORD 4 ACKNOWLEDGEMENTS 5 ABBREVIATIONS 6 EXECUTIVE SUMMARY 7 CHAPTER 1. INTRODUCTION 10 1.1 The Scale of the Antimicrobial Resistance Problem ...................10 1.2 Human and Animals – The ‘One Health’ Concept.....................11 1.3 The Background to the Antimicrobial Resistance Problem . .11 1.4 Genetic Diversity, Genetic Determinants and Change in Bacteria . 14 1.5 Selection for Antimicrobial Resistance...............................15 1.6 Surveillance of Antimicrobial Resistance in Ireland and Europe . .15 1.7 Prudent Use of Antimicrobials – Definition . 15 1.8 Surveillance of Antimicrobial Use in Ireland and Europe ...............16 1.9 Antimicrobials and the Food Chain . .16 1.10 Antimicrobial-resistant Bacteria and the Food Chain ..................16 1.11 Summary . .17 1.12 Chapter Bibliography..............................................17 CHAPTER 2. TERMS OF REFERENCE 20 2.1 Chapter Bibliography..............................................20 1 of 58 Report of the Scientific Potential for Transmission of Committee of the Food Safety Authority of Ireland Antimicrobial Resistance in the Food Chain CHAPTER 3. -
Optimal Vaccine Subsidies for Endemic and Epidemic Diseases Matthew Goodkin-Gold, Michael Kremer, Christopher M
WORKING PAPER · NO. 2020-162 Optimal Vaccine Subsidies for Endemic and Epidemic Diseases Matthew Goodkin-Gold, Michael Kremer, Christopher M. Snyder, and Heidi L. Williams NOVEMBER 2020 5757 S. University Ave. Chicago, IL 60637 Main: 773.702.5599 bfi.uchicago.edu OPTIMAL VACCINE SUBSIDIES FOR ENDEMIC AND EPIDEMIC DISEASES Matthew Goodkin-Gold Michael Kremer Christopher M. Snyder Heidi L. Williams The authors are grateful for helpful comments from Witold Więcek and seminar participants in the Harvard Economics Department, Yale School of Medicine, the “Infectious Diseases in Poor Countries and the Social Sciences” conference at Cornell University, the DIMACS “Game Theoretic Approaches to Epidemiology and Ecology” workshop at Rutgers University, the “Economics of the Pharmaceutical Industry” roundtable at the Federal Trade Commission’s Bureau of Economics, the U.S. National Institutes of Health “Models of Infectious Disease Agent” study group at the Hutchinson Cancer Research Center in Seattle, the American Economic Association “Economics of Infectious Disease” session, and the Health and Pandemics (HELP!) Economics Working Group “Covid-19 and Vaccines” workshop. Maya Durvasula, Nishi Jain, Amrita Misha, Frank Schilbach, and Alfian Tjandra provided excellent research assistance. Williams gratefully acknowledges financial support from NIA grant number T32- AG000186 to the NBER. © 2020 by Matthew Goodkin-Gold, Michael Kremer, Christopher M. Snyder, and Heidi L. Williams. All rights reserved. Short sections of text, not to exceed two paragraphs, may be quoted without explicit permission provided that full credit, including © notice, is given to the source. Optimal Vaccine Subsidies for Endemic and Epidemic Diseases Matthew Goodkin-Gold, Michael Kremer, Christopher M. Snyder, and Heidi L. -
Characterizing and Evaluating the Zoonotic Potential of Novel Viruses Discovered in Vampire Bats
viruses Article Characterizing and Evaluating the Zoonotic Potential of Novel Viruses Discovered in Vampire Bats Laura M. Bergner 1,2,* , Nardus Mollentze 1,2 , Richard J. Orton 2 , Carlos Tello 3,4, Alice Broos 2, Roman Biek 1 and Daniel G. Streicker 1,2 1 Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK; [email protected] (N.M.); [email protected] (R.B.); [email protected] (D.G.S.) 2 MRC–University of Glasgow Centre for Virus Research, Glasgow G61 1QH, UK; [email protected] (R.J.O.); [email protected] (A.B.) 3 Association for the Conservation and Development of Natural Resources, Lima 15037, Peru; [email protected] 4 Yunkawasi, Lima 15049, Peru * Correspondence: [email protected] Abstract: The contemporary surge in metagenomic sequencing has transformed knowledge of viral diversity in wildlife. However, evaluating which newly discovered viruses pose sufficient risk of infecting humans to merit detailed laboratory characterization and surveillance remains largely speculative. Machine learning algorithms have been developed to address this imbalance by ranking the relative likelihood of human infection based on viral genome sequences, but are not yet routinely Citation: Bergner, L.M.; Mollentze, applied to viruses at the time of their discovery. Here, we characterized viral genomes detected N.; Orton, R.J.; Tello, C.; Broos, A.; through metagenomic sequencing of feces and saliva from common vampire bats (Desmodus rotundus) Biek, R.; Streicker, D.G. and used these data as a case study in evaluating zoonotic potential using molecular sequencing Characterizing and Evaluating the data. -
Opportunistic Intruders: How Viruses Orchestrate ER Functions to Infect Cells
REVIEWS Opportunistic intruders: how viruses orchestrate ER functions to infect cells Madhu Sudhan Ravindran*, Parikshit Bagchi*, Corey Nathaniel Cunningham and Billy Tsai Abstract | Viruses subvert the functions of their host cells to replicate and form new viral progeny. The endoplasmic reticulum (ER) has been identified as a central organelle that governs the intracellular interplay between viruses and hosts. In this Review, we analyse how viruses from vastly different families converge on this unique intracellular organelle during infection, co‑opting some of the endogenous functions of the ER to promote distinct steps of the viral life cycle from entry and replication to assembly and egress. The ER can act as the common denominator during infection for diverse virus families, thereby providing a shared principle that underlies the apparent complexity of relationships between viruses and host cells. As a plethora of information illuminating the molecular and cellular basis of virus–ER interactions has become available, these insights may lead to the development of crucial therapeutic agents. Morphogenesis Viruses have evolved sophisticated strategies to establish The ER is a membranous system consisting of the The process by which a virus infection. Some viruses bind to cellular receptors and outer nuclear envelope that is contiguous with an intri‑ particle changes its shape and initiate entry, whereas others hijack cellular factors that cate network of tubules and sheets1, which are shaped by structure. disassemble the virus particle to facilitate entry. After resident factors in the ER2–4. The morphology of the ER SEC61 translocation delivering the viral genetic material into the host cell and is highly dynamic and experiences constant structural channel the translation of the viral genes, the resulting proteins rearrangements, enabling the ER to carry out a myriad An endoplasmic reticulum either become part of a new virus particle (or particles) of functions5. -
A New Twenty-First Century Science for Effective Epidemic Response
Review A new twenty-first century science for effective epidemic response https://doi.org/10.1038/s41586-019-1717-y Juliet Bedford1, Jeremy Farrar2*, Chikwe Ihekweazu3, Gagandeep Kang4, Marion Koopmans5 & John Nkengasong6 Received: 10 June 2019 Accepted: 24 September 2019 With rapidly changing ecology, urbanization, climate change, increased travel and Published online: 6 November 2019 fragile public health systems, epidemics will become more frequent, more complex and harder to prevent and contain. Here we argue that our concept of epidemics must evolve from crisis response during discrete outbreaks to an integrated cycle of preparation, response and recovery. This is an opportunity to combine knowledge and skills from all over the world—especially at-risk and afected communities. Many disciplines need to be integrated, including not only epidemiology but also social sciences, research and development, diplomacy, logistics and crisis management. This requires a new approach to training tomorrow’s leaders in epidemic prevention and response. connected, high-density urban areas (particularly relevant to Ebola, Anniversary dengue, influenza and severe acute respiratory syndrome-related coro- collection: navirus SARS-CoV). These factors and effects combine and interact, go.nature.com/ fuelling more-complex epidemics. nature150 Although rare compared to those diseases that cause the majority of the burden on population health, the nature of such epidemics disrupts health systems, amplifies mistrust among communities and creates high and long-lasting socioeconomic effects, especially in low- and When Nature published its first issue in 18691, a new understanding of middle-income countries. Their increasing frequency demands atten- infectious diseases was taking shape. The work of William Farr2, Ignaz tion. -
Zoonotic Diseases Fact Sheet
ZOONOTIC DISEASES FACT SHEET s e ion ecie s n t n p is ms n e e s tio s g s m to a a o u t Rang s p t tme to e th n s n m c a s a ra y a re ho Di P Ge Ho T S Incub F T P Brucella (B. Infected animals Skin or mucous membrane High and protracted (extended) fever. 1-15 weeks Most commonly Antibiotic melitensis, B. (swine, cattle, goats, contact with infected Infection affects bone, heart, reported U.S. combination: abortus, B. suis, B. sheep, dogs) animals, their blood, tissue, gallbladder, kidney, spleen, and laboratory-associated streptomycina, Brucellosis* Bacteria canis ) and other body fluids causes highly disseminated lesions bacterial infection in tetracycline, and and abscess man sulfonamides Salmonella (S. Domestic (dogs, cats, Direct contact as well as Mild gastroenteritiis (diarrhea) to high 6 hours to 3 Fatality rate of 5-10% Antibiotic cholera-suis, S. monkeys, rodents, indirect consumption fever, severe headache, and spleen days combination: enteriditis, S. labor-atory rodents, (eggs, food vehicles using enlargement. May lead to focal chloramphenicol, typhymurium, S. rep-tiles [especially eggs, etc.). Human to infection in any organ or tissue of the neomycin, ampicillin Salmonellosis Bacteria typhi) turtles], chickens and human transmission also body) fish) and herd animals possible (cattle, chickens, pigs) All Shigella species Captive non-human Oral-fecal route Ranges from asymptomatic carrier to Varies by Highly infective. Low Intravenous fluids primates severe bacillary dysentery with high species. 16 number of organisms and electrolytes, fevers, weakness, severe abdominal hours to 7 capable of causing Antibiotics: ampicillin, cramps, prostration, edema of the days. -
Evolution of Disease Transmission During the COVID-19
www.nature.com/scientificreports OPEN Evolution of disease transmission during the COVID‑19 pandemic: patterns and determinants Jie Zhu & Blanca Gallego* Epidemic models are being used by governments to inform public health strategies to reduce the spread of SARS‑CoV‑2. They simulate potential scenarios by manipulating model parameters that control processes of disease transmission and recovery. However, the validity of these parameters is challenged by the uncertainty of the impact of public health interventions on disease transmission, and the forecasting accuracy of these models is rarely investigated during an outbreak. We ftted a stochastic transmission model on reported cases, recoveries and deaths associated with SARS‑CoV‑2 infection across 101 countries. The dynamics of disease transmission was represented in terms of the daily efective reproduction number ( Rt ). The relationship between public health interventions and Rt was explored, frstly using a hierarchical clustering algorithm on initial Rt patterns, and secondly computing the time‑lagged cross correlation among the daily number of policies implemented, Rt , and daily incidence counts in subsequent months. The impact of updating Rt every time a prediction is made on the forecasting accuracy of the model was investigated. We identifed 5 groups of countries with distinct transmission patterns during the frst 6 months of the pandemic. Early adoption of social distancing measures and a shorter gap between interventions were associated with a reduction on the duration of outbreaks. The lagged correlation analysis revealed that increased policy volume was associated with lower future Rt (75 days lag), while a lower Rt was associated with lower future policy volume (102 days lag).