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SOME STUDIES on the RHABDITID NEMATODES of JAMMU and KASHMIR M^Ittx of $I)Tlo^Opi)P
SOME STUDIES ON THE RHABDITID NEMATODES OF JAMMU AND KASHMIR DISSERTATION SUBMITTED IN PARTIAL FULFILMENT OF THE REQUIREMENTS FOR THE AWARD OF THE DEGREE OF M^ittx of $I)tlo^opi)P IN ZOOLOGY BY ALI ASGHAR SHAH SECTION OF NEMATOLOGY DEPARTMENT OF ZOOLOGY ALIGARH MUSLIM UNIVERSITY ALIGARH (INDIA) 2001 ..r-'- ^^.^ '^X -^"^ - i,'A^>^<, <•• /^ '''^^ -:':^-:^ DS3204 Phones \ External: 700920/21-300/30 \ Internal: 300/301 DEPARTMENT OF ZOOLOGY ALIGARH MUSLIM UNIVERSITY '^it^^ ALIGARH—202002 INDIA Sections : 1. AGRICULTURAL NEMATOLOGY ^- ^°- /ZD 2. ENTOMOLOGY 3. FISHERY SCIENCE &AQUACULTURE Dated. 4. GENETICS 5. PARASITOLOGY This is to certify that the research work presented in the dissertation entitled "Some studies on the Rhabditid nematodes of Jammu and Kashmir", by Mr. Ali Asghar Shah is original and was carried out under my supervision. I have permitted Mr. Shah to submit it to the Aligarh Muslim University, Aligarh, in fulfilment of the requirements for the degree of Master of Philosophy in Zoology. Irfan Ahmad Professor "'7)ecfica/ecf ^o ma dearest Qincfe IS no more Aere io see t£e fruii ofmtj laoour. " ACKNOWLEDGEMENTS The auther is highly indebted to Prof. Irfan Ahmad for his excellent guidance, valuable advices and continuous encouragement during the course of present work and also for critically going through the manuscript. The author is grateful to Prof. A. K. Jafri Chairman, Department of Zoology for providing laboratory facilities. The author expresses sincere thanks to Mrs «& Prof. M. Shamim Jairajpuri, Prof. Shahid Hasan Khan, Dr. Wasim Ahmad, Dr. Qudsia Tahseen and Dr. (Mrs.) Anjum Ahmad for their constant encouragement and valuable suggestions. The constant inspiration and support from my parents, my elder brother Sayed Ali Akhtar Shah and my uncle Sayed Safeer Hussain Shah and the helping hands extended by my senior colleague Miss Azra Shaheen, my friend Md. -
Free-Living Marine Nematodes from San Antonio Bay (Río Negro, Argentina)
A peer-reviewed open-access journal ZooKeys 574: 43–55Free-living (2016) marine nematodes from San Antonio Bay (Río Negro, Argentina) 43 doi: 10.3897/zookeys.574.7222 DATA PAPER http://zookeys.pensoft.net Launched to accelerate biodiversity research Free-living marine nematodes from San Antonio Bay (Río Negro, Argentina) Gabriela Villares1, Virginia Lo Russo1, Catalina Pastor de Ward1, Viviana Milano2, Lidia Miyashiro3, Renato Mazzanti3 1 Laboratorio de Meiobentos LAMEIMA-CENPAT-CONICET, Boulevard Brown 2915, U9120ACF, Puerto Madryn, Argentina 2 Universidad Nacional de la Patagonia San Juan Bosco, sede Puerto Madryn. Boulevard Brown 3051, U9120ACF, Puerto Madryn, Argentina 3Centro de Cómputos CENPAT-CONICET, Boulevard Brown 2915, U9120ACF, Puerto Madryn, Argentina Corresponding author: Gabriela Villares ([email protected]) Academic editor: H-P Fagerholm | Received 18 November 2015 | Accepted 11 February 2016 | Published 28 March 2016 http://zoobank.org/3E8B6DD5-51FA-499D-AA94-6D426D5B1913 Citation: Villares G, Lo Russo V, Pastor de Ward C, Milano V, Miyashiro L, Mazzanti R (2016) Free-living marine nematodes from San Antonio Bay (Río Negro, Argentina). ZooKeys 574: 43–55. doi: 10.3897/zookeys.574.7222 Abstract The dataset of free-living marine nematodes of San Antonio Bay is based on sediment samples collected in February 2009 during doctoral theses funded by CONICET grants. A total of 36 samples has been taken at three locations in the San Antonio Bay, Santa Cruz Province, Argentina on the coastal littoral at three tidal levels. This presents a unique and important collection for benthic biodiversity assessment of Patagonian nematodes as this area remains one of the least known regions. -
Developmental Plasticity, Ecology, and Evolutionary Radiation of Nematodes of Diplogastridae
Developmental Plasticity, Ecology, and Evolutionary Radiation of Nematodes of Diplogastridae Dissertation der Mathematisch-Naturwissenschaftlichen Fakultät der Eberhard Karls Universität Tübingen zur Erlangung des Grades eines Doktors der Naturwissenschaften (Dr. rer. nat.) vorgelegt von Vladislav Susoy aus Berezniki, Russland Tübingen 2015 Gedruckt mit Genehmigung der Mathematisch-Naturwissenschaftlichen Fakultät der Eberhard Karls Universität Tübingen. Tag der mündlichen Qualifikation: 5 November 2015 Dekan: Prof. Dr. Wolfgang Rosenstiel 1. Berichterstatter: Prof. Dr. Ralf J. Sommer 2. Berichterstatter: Prof. Dr. Heinz-R. Köhler 3. Berichterstatter: Prof. Dr. Hinrich Schulenburg Acknowledgements I am deeply appreciative of the many people who have supported my work. First and foremost, I would like to thank my advisors, Professor Ralf J. Sommer and Dr. Matthias Herrmann for giving me the opportunity to pursue various research projects as well as for their insightful scientific advice, support, and encouragement. I am also very grateful to Matthias for introducing me to nematology and for doing an excellent job of organizing fieldwork in Germany, Arizona and on La Réunion. I would like to thank the members of my examination committee: Professor Heinz-R. Köhler and Professor Hinrich Schulenburg for evaluating this dissertation and Dr. Felicity Jones, Professor Karl Forchhammer, and Professor Rolf Reuter for being my examiners. I consider myself fortunate for having had Dr. Erik J. Ragsdale as a colleague for several years, and more than that to count him as a friend. We have had exciting collaborations and great discussions and I would like to thank you, Erik, for your attention, inspiration, and thoughtful feedback. I also want to thank Erik and Orlando de Lange for reading over drafts of this dissertation and spelling out some nuances of English writing. -
Nematode Taxonomic Diversity and Community Structure: Indicators of Environmental Conditions at Keetham Lake, Agra
NEMATODE TAXONOMIC DIVERSITY AND COMMUNITY STRUCTURE: INDICATORS OF ENVIRONMENTAL CONDITIONS AT KEETHAM LAKE, AGRA THESIS SUBMITTED FOR THE AWARD OF THE DEGREE OF DOCTOR OF PHILOSOPHY IN ZOOLOGY BY MALKA MUSTAQIM UNDER THE SUPERVISION OF PROF. QUDSIA TAHSEEN DEPARTMENT OF ZOOLOGY ALIGARH MUSLIM UNIVERSITY ALIGARH-202002 (INDIA) 2017 1 Dedicated to my Beloved Parents and Brothers 2 Qudsia Tahseen, Professor Department of Zoology, PhD, FASc, FNASc Aligarh Muslim University, Aligarh-202002, India Tel: +91 9319624196 E-mail: [email protected] Certificate This is to certify that the entire work presented in the thesis entitled, ‘‘Nematode taxonomic diversity and community structure: indicators of environmental conditions at Keetham Lake, Agra’’ by Ms. Malka Mustaqim is original and was carried out under my supervision. I have permitted Ms. Mustaqim to submit the thesis to Aligarh Muslim University, Aligarh for the award of degree of Doctor of Philosophy in Zoology. (Qudsia Tahseen) Supervisor 3 ANNEXURE-Ι CANDIDATE’S DECLARATION I, Malka Mustaqim, Department of Zoology, certify that the work embodied in this Ph.D. thesis is my own bonafide work carried out by me under the supervision of Prof. Qudsia Tahseen at Aligarh Muslim University, Aligarh. The matter embodied in this Ph.D. thesis has not been submitted for the award of any other degree. I declare that I have faithfully acknowledged, given credit to and referred to the research workers wherever their works have been cited in the text and the body of the thesis. I further certify that I have not willfully lifted up some others work, para, text, data, results, etc. -
Nematodes of the Order Rhabditida from Andalucía Oriental, Spain. the Genera Protorhabditis (Osche, 1952) Dougherty, 1953 and D
Journal of Nematology 39(3):263–274. 2007. © The Society of Nematologists 2007. Nematodes of the Order Rhabditida from Andalucía Oriental, Spain. The Genera Protorhabditis (Osche, 1952) Dougherty, 1953 and Diploscapter Cobb, 1913, with Description of P. spiculocrestata sp. n. and a Species Protorhabditis Key J. Abolafia,R.Pen˜a-Santiago Abstract: A new species of the genus Protorhabditis is described from natural areas in the SE Iberian Peninsula. Protorhabditis spiculocrestata sp. n. is distinguished by its body length 387–707 µm in females and 375–546 µm in males, lip very low and flattened, stoma 14–22 µm long, female tail conical-elongate (48–100 µm, c = 6.4–8.3, cЈ = 4.8–7.5), phasmid near anus, male tail conical (20–27 µm, c = 18.3–22.3, cЈ = 1.4–1.5), bursa peloderan closed anteriorly and bears eight papillae (1+2+1+1+3), spicules 23–26 µm long, and gubernaculum 10–16 µm long. Diploscapter coronatus is also presented. Description, measurements and illustrations, including SEM photographs, are provided. A key to species of Protorhabditis is also given as well a compendium of their measure- ments. Key words: description, Diploscapter, key, morphology, new species, Protorhabditis, Rhabditids, SE Spain, SEM, taxonomy. Rhabditid nematodes are an interesting zoological mis (Bütschli, 1873) Sudhaus, 1976, P. tristis (Hirsch- taxon. They are very abundant in all types of soil and mann, 1952) Dougherty, 1955 and D. coronatus (Cobb, sediments of freshwater bodies and play important eco- 1893) Cobb, 1913. Nevertheless, no relevant morpho- logical roles mainly as primary consumers—their free- logical or taxonomical information on them was pro- living forms display saprophagous or bacteriophagous vided in the corresponding publications. -
The Evolutionary Developmental Biology of Nematodes
HIGHLIGHTED ARTICLE | WORMBOOK EVOLUTION AND ECOLOGY From “the Worm” to “the Worms” and Back Again: The Evolutionary Developmental Biology of Nematodes Eric S. Haag,*,1 David H. A. Fitch,† and Marie Delattre‡ *Department of Biology, University of Maryland, College Park, Maryland 20742, †Department of Biology, New York University, New York 10003, and ‡Laboratoire de Biologie Moléculaire de la Cellule, CNRS, INSERM, Ecole Normale Supérieure de Lyon, 69007, France ORCID IDs: 0000-0002-6102-3498 (E.S.H.); 0000-0001-6940-7544 (D.H.A.F.); 0000-0003-1640-0300 (M.D.) ABSTRACT Since the earliest days of research on nematodes, scientists have noted the developmental and morphological variation that exists within and between species. As various cellular and developmental processes were revealed through intense focus on Caenorhabditis elegans, these comparative studies have expanded. Within the genus Caenorhabditis, they include characterization of intraspecific polymorphisms and comparisons of distinct species, all generally amenable to the same laboratory culture methods and supported by robust genomic and experimental tools. The C. elegans paradigm has also motivated studies with more distantly related nematodes and animals. Combined with improved phylogenies, this work has led to important insights about the evolution of nematode development. First, while many aspects of C. elegans development are representative of Caenorhabditis, and of terrestrial nematodes more generally, others vary in ways both obvious and cryptic. Second, the system has revealed several clear examples of developmental flexibility in achieving a particular trait. This includes developmental system drift, in which the developmental control of homologous traits has diverged in different lineages, and cases of convergent evolution. -
Sixtieth Society of Nematologists Conference Gulf Shores, Alabama
Sixtieth Society of Nematologists Conference Gulf Shores, Alabama September 12 – 16, 2021 LOCAL ARRANGEMENTS COMMITTEE Chair: Kathy Lawrence Department of Entomology & Plant Pathology Auburn University Auburn, Alabama Committee Members: Pat Donald Bisho Lawaju Department of Entomology & Plant Department of Entomology & Plant Pathology Pathology Auburn University Auburn University Auburn, Alabama Auburn, Alabama Kate Turner Marina Rondon Department of Entomology & Plant Department of Entomology & Plant Pathology Pathology Auburn University Auburn University Auburn, Alabama Auburn, Alabama Gary Lawrence Retired Nematologist Program Chair: Kathy Lawrence Professor of Nematology Department of Entomology & Plant Pathology Auburn University Auburn, Alabama 2 Society of Nematologists Executive Board 2020-2021 Andrea Skantar, President Kathy Lawrence, President-Elect Axel Elling, Vice President Sally Stetina, Past President Brent Sipes, Secretary Nathan Schroder, Treasurer Ralf J. Sommer, Editor-in-Chief, JON Churamani Khanal, Website Editor Gary Phillips, Editor, NNL Adrienne Gorney, Executive Member Tesfa Mengistu, Executive Member Travis Faske, Executive Member 3 Society of Nematologists Sixtieth meeting dedications 2021 Dr. Grover C. Smart Jr. 1929-2020 Dr. Smart was one of the first members of SON, a Fellow of SON, and EIC of the JON. Dr. Seymour Dean Van Gundy 1931-2020 Dr. Gundy was instrumental in extablishing the Journal of Nematology, served as the first EIC, a Fellow of SON, and a Honoray Member. 4 ACKNOWLEDGEMENTS The following sponsors have provided support for the meeting: Corteva Bayer Cotton Incorporated Auburn University Department of Entomology and Plant Pathology 5 Sustaining Associates Sustaining Associates are organizations which contribute to the Society and have all the privileges of regular members. To show our appreciation for the generosity of Sustaining Associates, we acknowledge their companies in all our publications as well as on our website. -
Taxaliste Der Gewässerorganismen Deutschlands Zur Kodierung
Bayerisches Landesamt für Wasserwirtschaft (Herausgeber und Verlag) · München 2003 Taxaliste der Gewässer- organismen Deutschlands zur Kodierung biologischer Befunde Informationsberichte Heft 1/03 Informationsberichte des Bayerischen Landsamtes für Wasserwirtschaft Heft 01/03 München, 2003 – ISBN 3-930253-89-5 367 Seiten, 6 Abbildungen, 1 Tabelle, 1 CD, gedruckt auf chlorfrei gebleichtem Papier Herausgeber: Bayerisches Landesamt für Wasserwirtschaft, Lazarettstraße 67, D-80636 München, eine Behörde im Geschäftsbereich des Bayerischen Staatsministeriums für Landesentwicklung und Umweltfragen Autoren: Dr. Erik Mauch Dr. Ursula Schmedtje Dipl.-Ing (FH) Anette Maetze Dipl.-Biol. Folker Fischer Druck: Druckhaus Fritz König GmbH, München Bezug: Wasserwirtschaftsamt Deggendorf, Postfach 2061, 94460 Deggendorf Nachdruck und Wiedergabe – auch auszugsweise – nur mit Genehmigung des Herausgebers Vorwort Für die nationale und internationale Zusammenarbeit im Bereich der biologischen Gewässer- untersuchung ist die eindeutige Benennung und Kodierung der Gewässerorganismen entschei- dend. Diesem Zweck dient die „Taxaliste der Gewässerorganismen Deutschlands“, die hiermit erstmalig veröffentlicht wird. Die Liste enthält fast 10 000 in Deutschland vorkommende Gewässerorganismen der unterschied- lichsten limnischen Lebensräume. Jedem dieser Taxa wurde eine eindeutige Kennziffer zugewiesen. So ist es möglich, die Untersuchungsergebnisse innerhalb sowie zwischen den Flussgebieten in einheitlichen Datenbanken zusammenzufassen und auszuwerten. Damit stellt -
Impact of Trophic Ecologies on the Whereabouts of Nematodes in Soil
Impact of trophic ecologies on the whereabouts of nematodes in soil Casper W. Quist Thesis committee Promotor Prof. Dr Jaap Bakker Professor of Nematology Wageningen University & Research Co-promotor Dr Johannes Helder Associate professor, Laboratory of Nematology Wageningen University & Research Other members Prof. Dr Wietse de Boer, Wageningen University & Research Dr Sofie Derycke, Royal Belgian Institute of Natural Sciences, Brussels, Belgium Prof. Dr Michael Bonkowski, University of Cologne, Germany Dr Christien Ettema, CEO Shades of Green This research was conducted under the auspices of the C.T. de Wit Graduate School of Production Ecology and Resource Conservation Impact of trophic ecologies on the whereabouts of nematodes in soil Casper W. Quist Thesis submitted in fulfilment of the requirements for the degree of doctor at Wageningen University by the authority of the Rector Magnificus, Prof. Dr A.P.J Mol, in the presence of the Thesis Committee appointed by the Academic Board to be defended in public on Friday 19 May 2017 at 1:30 p.m. in the Aula. Casper W. Quist Impact of trophic ecologies on the whereabouts of nematodes in soil, 130 pages. PhD thesis, Wageningen University, Wageningen, the Netherlands (2017) With references, with summary in English. ISBN 978-94-6343-081-4 DOI http://dx.doi.org/ 10.18174/403954 Contents Chapter 1 General introduction 7 Chapter 2 Selective alteration of soil food web components by 17 invasive giant goldenrod Solidago gigantea in two distinct habitat types (published in Oikos 2014, 123, 837-845) -
Dissertation Abstract
Nematode Community Structure and Effects on Peanut Production Systems by Kassie N. Conner A dissertation submitted to the Graduate Faculty of Auburn University in partial fulfillment of the Requirements for the Degree of Doctor of Philosophy Auburn, Alabama August 9, 2010 Keywords: aflatoxins, DGGE, molecular, nematology Copyright 2010 by Kassie N. Conner Approved by Robin N. Huettel, Chair, Professor of Plant Pathology Covadonga R. Arias, Associate Professor of Fisheries and Allied Aquacultures Kira L. Bowen, Professor of Plant Pathology Austin Hagan, Extension Specialist of Plant Pathology Abstract Understanding the total nematode community in agronomic systems and its impact on crop health may provide insight into more sustainable management strategies. In this study the focus was on management of the peanut root-knot nematode, Meloidogyne arenaria race 1 and the aflatoxigenic fungi Aspergillus flavus and A. parasiticus, a toxic food contaminate that poses a threat to humans and animals, to increase peanut yields while lowering toxins. The overall approach of management is to suppress plant-parasitic nematodes that facilitate invasion of the toxin producing fungi through manipulation of free-living nematode populations that act to increase plant health. The objectives of this research were 1) evaluate nematode consensus primers and Denaturing Gradient Gel Electrophoresis (DGGE) techniques for effectiveness in identification of nematode populations and monitoring community shifts; 2) develop nematode genetic profiles of selected soil samples, using DGGE fingerprinting, from different rotation sequences: continuous peanut, continuous bahiagrass, peanut/cotton, and peanut/corn, to determine if any factors exist that result in nematode population shifts; and 3) identify individual populations in the nematode community and determine their relationship with peanut yields and aflatoxin contamination. -
JOURNAL of NEMATOLOGY Morphological, Morphometrical, and Molecular Characterization of Metarhabditis Amsactae
JOURNAL OF NEMATOLOGY Article | DOI: 10.21307/jofnem-2020-116 e2020-116 | Vol. 52 Morphological, morphometrical, and molecular characterization of Metarhabditis amsactae (Ali, Pervez, Andrabi, Sharma and Verma, 2011) Sudhaus, 2011 (Rhabditida, Rhabditidae) from India and proposal of Metarhabditis longicaudata as a junior synonym of M. amsactae Aashaq Hussain Bhat1,4,*, Shreyansh Srivastava1, Aasha Rana1, Ashok Kumar Abstract 1 2 Chaubey , Ricardo A. R. Machado A new population of Metarhabditis amsactae from India is 3 and Joaquín Abolafia morphologically, morphometrically, and molecularly characterized. 1Nematology Laboratory, This material is characterized by having 0.65 to 1.14 mm length, Department of Zoology, Chaudhary lips rounded, and grouped in pairs, stoma with metastegostoma Charan Singh University, Meerut, bearing setose denticles, pharynx with metacorpus slightly swollen India. and fusiform, nerve ring, and excretory pore located at isthmus 2 level, female reproductive system didelphic-amphidelphic with Experimental Biology Research vulva equatorial, female tail conical-elongate with acute tip, male Group, Institute of Biology, tail conical with large and robust posterior filiform part, spicules free University of Neuchâtel, 2000, with hooked manubrium slightly bent ventrad, gubernaculum with Neuchâtel, Switzerland. narrow corpus, bursa open leptoderan with eight genital papillae and 3Departamento de Biología Animal, phasmids posterior to the GP8. Molecular studies based on 18S and Biología Vegetal y Ecología, 28S rDNA genes are provided for the first time for the species. In Universidad de Jaén, Jaén, Spain. addition, integrated morphological, morphometrical, and molecular characters are compared with other previous records of the species. 4Government Degree College, According to our analysis, Metarhabditis longicaudata and other Billawar, 184204, Kathua, Jammu material described as different species are proposed as new junior and Kashmir, India. -
Evolution of Developmental GATA Factors in Nematodes
Journal of Developmental Biology Article Evolution of Developmental GATA Factors in Nematodes Ethan Eurmsirilerd 1,2 and Morris F. Maduro 2,* 1 Undergraduate Program in Biology, Department of Molecular, Cell, and Systems Biology, University of California, Riverside, Riverside, CA 92521, USA; [email protected] 2 Department of Molecular, Cell, and Systems Biology, University of California, Riverside, Riverside, CA 92521, USA * Correspondence: [email protected] Received: 19 October 2020; Accepted: 11 November 2020; Published: 16 November 2020 Abstract: GATA transcription factors are found in animals, plants, and fungi. In animals, they have important developmental roles in controlling specification of cell identities and executing tissue-specific differentiation. The Phylum Nematoda is a diverse group of vermiform animals that inhabit ecological niches all over the world. Both free-living and parasitic species are known, including those that cause human infectious disease. To date, GATA factors in nematodes have been studied almost exclusively in the model system C. elegans and its close relatives. In this study, we use newly available sequences to identify GATA factors across the nematode phylum. We find that most species have fewer than six GATA factors, but some species have 10 or more. Comparisons of gene and protein structure suggest that there were at most two GATA factors at the base of the phylum, which expanded by duplication and modification to result in a core set of four factors. The high degree of structural similarity with the corresponding orthologues in C. elegans suggests that the nematode GATA factors share similar functions in development. Keywords: GATA factors; transcription factors; nematodes 1.