Ecological Characteristics of Invasive Alien Plants John H
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Priority Actions to Improve Provenance Decision-Making
Forum Priority Actions to Improve Provenance Decision-Making MARTIN F. BREED, PETER A. HARRISON, ARMIN BISCHOFF, PAULA DURRUTY, NICK J. C. GELLIE, EMILY K. GONZALES, KAYRI HAVENS, MARION KARMANN, FRANCIS F. KILKENNY, SIEGFRIED L. KRAUSS, ANDREW J. LOWE, PEDRO MARQUES, PAUL G. NEVILL, PATI L. VITT, AND ANNA BUCHAROVA Selecting the geographic origin—the provenance—of seed is a key decision in restoration. The last decade has seen a vigorous debate on whether to use local or nonlocal seed. The use of local seed has been the preferred approach because it is expected to maintain local adaptation and avoid deleterious population effects (e.g., maladaptation and outbreeding depression). However, the impacts of habitat fragmentation and climate change on plant populations have driven the debate on whether the local-is-best standard needs changing. This debate has largely been theoretical in nature, which hampers provenance decision-making. Here, we detail cross-sector priority actions to improve provenance decision-making, including embedding provenance trials into restoration projects; developing dynamic, evidence-based provenance policies; and establishing stronger research–practitioner collaborations to facilitate the adoption of research outcomes. We discuss how to tackle these priority actions in order to help satisfy the restoration sector’s requirement for appropriately provenanced seed. Keywords: assisted migration, ecological restoration, local adaptation, restoration genetics he restoration sector’s demand for seed is Williams et al. 2014, Havens et al. 2015, Prober et al. 2015, Tenormous and is rapidly increasing with the growth Breed et al. 2016b, Christmas et al. 2016b). in the global restoration effort (Verdone and Seidl 2017). -
Impatiens Glandulifera (Himalayan Balsam) Chloroplast Genome Sequence As a Promising Target for Populations Studies
Impatiens glandulifera (Himalayan balsam) chloroplast genome sequence as a promising target for populations studies Giovanni Cafa1, Riccardo Baroncelli2, Carol A. Ellison1 and Daisuke Kurose1 1 CABI Europe, Egham, Surrey, UK 2 University of Salamanca, Instituto Hispano-Luso de Investigaciones Agrarias (CIALE), Villamayor (Salamanca), Spain ABSTRACT Background: Himalayan balsam Impatiens glandulifera Royle (Balsaminaceae) is a highly invasive annual species native of the Himalayas. Biocontrol of the plant using the rust fungus Puccinia komarovii var. glanduliferae is currently being implemented, but issues have arisen with matching UK weed genotypes with compatible strains of the pathogen. To support successful biocontrol, a better understanding of the host weed population, including potential sources of introductions, of Himalayan balsam is required. Methods: In this molecular study, two new complete chloroplast (cp) genomes of I. glandulifera were obtained with low coverage whole genome sequencing (genome skimming). A 125-year-old herbarium specimen (HB92) collected from the native range was sequenced and assembled and compared with a 2-year-old specimen from UK field plants (HB10). Results: The complete cp genomes were double-stranded molecules of 152,260 bp (HB92) and 152,203 bp (HB10) in length and showed 97 variable sites: 27 intragenic and 70 intergenic. The two genomes were aligned and mapped with two closely related genomes used as references. Genome skimming generates complete organellar genomes with limited technical and financial efforts and produces large datasets compared to multi-locus sequence typing. This study demonstrates the 26 July 2019 Submitted suitability of genome skimming for generating complete cp genomes of historic Accepted 12 February 2020 Published 24 March 2020 herbarium material. -
Journal of Ecology, 109 (1)
Article (refereed) - postprint This is the peer reviewed version of the following article: Formenti, Ludovico; Caggìa, Veronica; Puissant, Jeremy; Goodall, Tim; Glauser, Gaétan; Griffiths, Robert; Rasmann, Sergio. 2021. The effect of root‐associated microbes on plant growth and chemical defence traits across two contrasted elevations. Journal of Ecology, 109 (1). 38-50, which has been published in final form at https://doi.org/10.1111/1365-2745.13440 This article may be used for non-commercial purposes in accordance with Wiley Terms and Conditions for Use of Self-Archived Versions. © 2020 British Ecological Society This version is available at https://nora.nerc.ac.uk/id/eprint/528184/ Copyright and other rights for material on this site are retained by the rights owners. Users should read the terms and conditions of use of this material at https://nora.nerc.ac.uk/policies.html#access. This document is the authors’ final manuscript version of the journal article, incorporating any revisions agreed during the peer review process. There may be differences between this and the publisher’s version. You are advised to consult the publisher’s version if you wish to cite from this article. The definitive version is available at https://onlinelibrary.wiley.com/ Contact UKCEH NORA team at [email protected] The NERC and UKCEH trademarks and logos (‘the Trademarks’) are registered trademarks of NERC and UKCEH in the UK and other countries, and may not be used without the prior written consent of the Trademark owner. Journal of Ecology DR SERGIO RASMANN -
Invasive Species Identification Guide
Invasive Species Identification guides – Table of Contents Floating Pennywort (Hydrocotyle ranunculoides)……………………………….…………………………………2 Giant Hogweed (Heracleum mantegazzianum)…………………………………………………………………….4 Himalayan balsam (Impatiens glandulifera)………………………………………………………….…………….6 Japanese knotweed (Fallopia japonica)………………………………………………………………………………..8 New Zealand pigmyweed (Crassula helmsii)……………………………………………………………………….10 Water fern (Azolla filiculoides)……………………………………………………………………………………………12 This list is by no means exhaustive. Please refer to pages 233-237 of the Lincolnshire Biodiversity Action Plan (3rd Edition) for a list of priority non-native invasive species for our area. Floating pennywort Hydrocotyle ranunculoides Invasive species identification guide Where is it found? Floating on the surface or emerging from still or slowly moving freshwater. Can be free floating or rooted. Similar to…… Marsh pennywort (see bottom left photo) – this has a smaller more rounded leaf that attaches to the stem in the centre rather than between two lobes. Will always be rooted and never free floating. Key features Lobed leaves Fleshy green or red stems Floating or rooted Forms dense interwoven mats Leaf Leaves can be up to 7cm in diameter. Lobed leaves can float on or stand above the water. Marsh pennywort Roots Up to 5cm Fine white Stem attaches in roots centre More rounded leaf Floating pennywort Larger lobed leaf Stem attaches between lobes Photos © GBNNSS Workstream title goes here Invasive species ID guide: Floating pennywort Management Floating pennywort is extremely difficult to control due to rapid growth rates (up to 20cm from the bank each day). Chemical control: Can use glyphosphate but plant does not rot down very quickly after treatment so vegetation should be removed after two to three weeks in flood risk areas. Regular treatment necessary throughout the growing season. -
What Are Plant Ecotypes?
United States Department of Agriculture Natural Resources Conservation Service Technical Note No: TX-PM-10-5 August 2010 What Are Plant Ecotypes? Plant Materials Technical Note Variation in early greenup of switchgrass collections in a common garden plot, Shelly Maher, E. “Kika” de la Garza PMC Range scientists and agronomists have shown that individual species having a large geographical distribution vary considerably in such characteristics as plant height, growth habits, maturation dates, leaf appearance, and reproductive habits. These characteristics are not distributed randomly throughout the range of the species but are clustered into ecological regions (ecoregions) or seed transfer zones. Plants within these ecological regions are known as ecotypes. Ecotypes were first recognized by scientists as far back as the 1920’s. Grass ecotypes assembled in common garden studies revealed that northern ecotypes of sideoats grama flower earlier than more southern ecotypes, resulting in shorter plants. Ecotypes of little bluestem originating from either sandy or clay soils did not do well when placed on soils of the opposite texture. More recently Dr. Danny Gustafson found that genetic, morphological and phenological differences existed between ecoregional sources of big bluestem, Indiangrass and purple prairie clover. Locally adapted plant materials are widely recommended because of their increased chances of establishment success and genetic compatibility with surrounding populations. However, it is important to consider the isolation and thus the potential genetic inbreeding of limiting oneself solely to localized remnant populations. Frequently people try to simplify what an ecotype is by stating that it is a plant that is within 100-200 miles of its center of origin. -
Emergent Biogeography of Microbial Communities in a Model Ocean
REPORTS germ insects not only uncovers those features es- mRNA localization indeed appears to be an sential to this developmental mode but also sheds important component of long-germ embryogene- light on how the bcd-dependent anterior patterning sis, perhaps even playing a role in the transition program might have evolved. Through analysis of from the ancestral short-germ to the derived long- the regulation of the trunk gap gene Kr in Dro- germ fate. sophila and Nasonia,wehavebeenabletodem- onstrate that anterior repression of Kr is essential References and Notes for head and thorax formation and is a common 1. G. K. Davis, N. H. Patel, Annu. Rev. Entomol. 47, 669 (2002). feature of long-germ patterning. Both insects 2. T. Berleth et al., EMBO J. 7, 1749 (1988). accomplish this task through maternal, anteriorly 3. W. Driever, C. Nusslein-Volhard, Cell 54, 83 (1988). localized factors that either indirectly (Drosophila) 4. J. Lynch, C. Desplan, Curr. Biol. 13, R557 (2003). or directly (Nasonia) repress Kr and, hence, trunk 5. J. A. Lynch, A. E. Brent, D. S. Leaf, M. A. Pultz, C. Desplan, Nature 439, 728 (2006). fates. In Drosophila, the terminal system and bcd 6. J. Savard et al., Genome Res. 16, 1334 (2006). regulate expression of gap genes, including Dm-gt, 7. G. Struhl, P. Johnston, P. A. Lawrence, Cell 69, 237 (1992). that repress Dm-Kr. Nasonia’s bcd-independent 8. A. Preiss, U. B. Rosenberg, A. Kienlin, E. Seifert, long-germ embryos must solve the same problem, H. Jackle, Nature 313, 27 (1985). Fig. 4. -
Maine Coefficient of Conservatism
Coefficient of Coefficient of Scientific Name Common Name Nativity Conservatism Wetness Abies balsamea balsam fir native 3 0 Abies concolor white fir non‐native 0 Abutilon theophrasti velvetleaf non‐native 0 3 Acalypha rhomboidea common threeseed mercury native 2 3 Acer ginnala Amur maple non‐native 0 Acer negundo boxelder non‐native 0 0 Acer pensylvanicum striped maple native 5 3 Acer platanoides Norway maple non‐native 0 5 Acer pseudoplatanus sycamore maple non‐native 0 Acer rubrum red maple native 2 0 Acer saccharinum silver maple native 6 ‐3 Acer saccharum sugar maple native 5 3 Acer spicatum mountain maple native 6 3 Acer x freemanii red maple x silver maple native 2 0 Achillea millefolium common yarrow non‐native 0 3 Achillea millefolium var. borealis common yarrow non‐native 0 3 Achillea millefolium var. millefolium common yarrow non‐native 0 3 Achillea millefolium var. occidentalis common yarrow non‐native 0 3 Achillea ptarmica sneezeweed non‐native 0 3 Acinos arvensis basil thyme non‐native 0 Aconitum napellus Venus' chariot non‐native 0 Acorus americanus sweetflag native 6 ‐5 Acorus calamus calamus native 6 ‐5 Actaea pachypoda white baneberry native 7 5 Actaea racemosa black baneberry non‐native 0 Actaea rubra red baneberry native 7 3 Actinidia arguta tara vine non‐native 0 Adiantum aleuticum Aleutian maidenhair native 9 3 Adiantum pedatum northern maidenhair native 8 3 Adlumia fungosa allegheny vine native 7 Aegopodium podagraria bishop's goutweed non‐native 0 0 Coefficient of Coefficient of Scientific Name Common Name Nativity -
Impatiens Glandulifera
NOBANIS – Invasive Alien Species Fact Sheet Impatiens glandulifera Author of this fact sheet: Harry Helmisaari, SYKE (Finnish Environment Institute), P.O. Box 140, FIN-00251 Helsinki, Finland, Phone + 358 20 490 2748, E-mail: [email protected] Bibliographical reference – how to cite this fact sheet: Helmisaari, H. (2010): NOBANIS – Invasive Alien Species Fact Sheet – Impatiens glandulifera. – From: Online Database of the European Network on Invasive Alien Species – NOBANIS www.nobanis.org, Date of access x/x/201x. Species description Scientific name: Impatiens glandulifera Royle (Balsaminaceae). Synonyms: Impatiens roylei Walpers. Common names: Himalayan balsam, Indian balsam, Policeman's Helmet (GB), Drüsiges Springkraut, Indisches Springkraut (DE), kæmpe-balsamin (DK), verev lemmalts (EE), jättipalsami (FI), risalísa (IS), bitinė sprigė (LT), puķu sprigane (LV), Reuzenbalsemien (NL), kjempespringfrø (NO), Niecierpek gruczolowaty, Niecierpek himalajski (PL), недотрога железконосная (RU), jättebalsamin (SE). Fig. 1 and 2. Impatiens glandulifera in an Alnus stand in Helsinki, Finland, and close-up of the seed capsules, photos by Terhi Ryttäri and Harry Helmisaari. Fig. 3 and 4. White and red flowers of Impatiens glandulifera, photos by Harry Helmisaari. Species identification Impatiens glandulifera is a tall annual with a smooth, usually hollow and jointed stem, which is easily broken (figs. 1-4). The stem can reach a height of 3 m and its diameter can be up to several centimetres. The leaves are opposite or in whorls of 3, glabrous, lanceolate to elliptical, 5-18 cm long and 2.5-7 cm wide. The inflorescences are racemes of 2-14 flowers that are 25-40 mm long. Flowers are zygomorphic, their lowest sepal forming a sac that ends in a straight spur. -
A Review of Caribou Population Dynamics in Alaska Emphasizing Limiting Factors, Theory, and Management Implications
DAVIS A REVIEW OF CARIBOU POPULATION DYNAMICS IN ALASKA EMPHASIZING LIMITING FACTORS, THEORY, AND MANAGEMENT IMPLICATIONS James L. Davis, Alaska Department of Fish and Game, 1300 College Road, Fairbanks, AK 99701 U.S.A. Patrick Valkenburg, Alaska Department of Fish and Ga;me, 1300 College Road, Fairbanks, AK 99701 USA 1 Abstract: Alaska's 29 recognized caribou (Rangifer tarandus granti) herds are classified to identify those that are both migratory and inhabit areas where moose (Alces alces) (or other ungulates) are important alternate prey. During the time that detailed demographic data have been obtained (i.e., 1960s-1980s), natural mortality and human-induced mortality have varied more and have more influenced Alaska's caribou herd demographics than have natality changes. Dispersal has not significantly influenced population dynamics during this time and has not been consistent with theory in the caribou literature. Detailed demographic data have been obtained primarily during low and increasing phases of populations. Recent conclusions regarding limiting and regulating factors are compared and contrasted with past reviews of Alaskan caribou population dynamics. INTRODUCTION For discussion at the 4th North American Caribou Workshop, caribou in North America were envisioned as comprising 3 ecotypes (F. Messier, pers. commun.): ecotype 1- woodland caribou (B-~ caribou) - 184 -- ---------~-------------------- living in association with alternate ungulate prey (e.g., British Columbia caribou); ecotype 2- migratory caribou herds that inhabit areas also used by alternate ungulate prey (particularly moose) (e.g. , Alaska caribou) ; and ecotype 3 - migratory caribou herds having limited contact with alternate ungulate prey (e.g., the George River Herd in Quebec/Labrador). This paper discusses population dynamics in the Alaskan caribou ecotype. -
How Does Genome Size Affect the Evolution of Pollen Tube Growth Rate, a Haploid Performance Trait?
Manuscript bioRxiv preprint doi: https://doi.org/10.1101/462663; this version postedClick April here18, 2019. to The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv aaccess/download;Manuscript;PTGR.genome.evolution.15April20 license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Effects of genome size on pollen performance 2 3 4 5 How does genome size affect the evolution of pollen tube growth rate, a haploid 6 performance trait? 7 8 9 10 11 John B. Reese1,2 and Joseph H. Williams2 12 Department of Ecology and Evolutionary Biology, University of Tennessee, Knoxville, TN 13 37996, U.S.A. 14 15 16 17 1Author for correspondence: 18 John B. Reese 19 Tel: 865 974 9371 20 Email: [email protected] 21 1 bioRxiv preprint doi: https://doi.org/10.1101/462663; this version posted April 18, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 22 ABSTRACT 23 Premise of the Study – Male gametophytes of most seed plants deliver sperm to eggs via a 24 pollen tube. Pollen tube growth rates (PTGRs) of angiosperms are exceptionally rapid, a pattern 25 attributed to more effective haploid selection under stronger pollen competition. Paradoxically, 26 whole genome duplication (WGD) has been common in angiosperms but rare in gymnosperms. -
Taxonomic Resolution, Ecotypes and the Biogeography of Prochlorococcus
Environmental Microbiology (2009) 11(4), 823–832 doi:10.1111/j.1462-2920.2008.01803.x Taxonomic resolution, ecotypes and the biogeography of Prochlorococcus Adam C. Martiny,1,2,3*AmosP.K.Tai,1† by a hierarchy of environmental factors as well dis- Daniele Veneziano,1 François Primeau2 and persal limitation. Sallie W. Chisholm1** 1Department of Civil & Environmental Engineering, Introduction Massachusetts Institute of Technology, Cambridge, MA 02139, USA. The marine cyanobacterium Prochlorococcus is an impor- Departments of 2Earth System Science and 3Ecology tant contributor to global nutrient cycles, as it contributes and Evolutionary Biology, University of California – a significant fraction of the primary production in mid- Irvine, Irvine, CA 92697, USA. latitude oceans (Liu et al., 1997). Prochlorococcus is known to thrive under a wide range of environmental conditions, which in part may be due to the existence of Summary several closely related (> 97% 16S rRNA similarity) but In order to expand our understanding of the diversity physiological and genetically distinct lineages. At broad and biogeography of Prochlorococcus ribotypes, we taxonomic resolution, Prochlorococcus strains can be PCR-amplified, cloned and sequenced the 16S/23S divided into two ecotypes, high-light (HL)-adapted and rRNA ITS region from sites in the Atlantic and Pacific low-light (LL)-adapted (Moore et al., 1998). Most of the oceans. Ninety-three per cent of the ITS sequences LL-adapted ecotypes are found in significant abundance could be assigned to existing Prochlorococcus only in deeper waters, while the HL-adapted cells typically clades, although many novel subclades were dominate surface waters (West and Scanlan, 1999). -
Is the Spread of Non-Native Plants in Alaska Accelerating?
Meeting the Challenge: Invasive Plants in Pacific Northwest Ecosystems IS THE SPREAD OF NON-NATIVE PLANTS IN ALASKA ACCELERATING? Matthew L. Carlson1 and Michael Shephard2 ABSTRACT Alaska has remained relatively unaffected by non-native plants; however, recently the state has started to experience an influx of invasive non-native plants that the rest of the U.S. underwent 60–100 years ago. With the increase in population, gardening, development, and commerce there have been more frequent introductions to Alaska. Many of these species, such as meadow hawkweed (Hieracium caespitosum), Canada thistle (Cirsium arvense), and spotted knapweed (Centaurea biebersteinii), have only localized populations in Alaska. Other species such as reed canary grass (Phalaris arundinacea) and white sweetclover (Melilotus officinalis), both formerly used in roadside seed mixes, are now very widespread and are moving into riparian areas and wetlands. We review the available literature and Alaska’s statewide invasive plant database (AKEPIC, Alaska Exotic Plant Clearinghouse) to summarize changes in Alaska’s non-native flora over the last 65 years. We suggest that Alaska is not immune to invasion, but rather that the exponential increase in non-native plants experienced else- where is delayed by a half century. This review highlights the need for more intensive detection and rapid response work if Alaska is going to remain free of many of the invasive species problems that plague the contiguous U.S. KEYWORDS: Alaska, invasion patterns, invasive plants, non-native plants, plant databases. INTRODUCTION presence of non-native plants. Recently, however, popula- Most botanists and ecologists thought Alaska was immune tions of many non-native species appear to be expanding to the invasion of non-native plants the rest of the United and most troubling, a number of species are spreading into States had experienced, and continue to experience, given natural habitats.