The Controversy Space on Quaternary Megafaunal Extinctions
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Ancient Mitogenomes Shed Light on the Evolutionary History And
Ancient Mitogenomes Shed Light on the Evolutionary History and Biogeography of Sloths Frédéric Delsuc, Melanie Kuch, Gillian Gibb, Emil Karpinski, Dirk Hackenberger, Paul Szpak, Jorge Martinez, Jim Mead, H. Gregory Mcdonald, Ross Macphee, et al. To cite this version: Frédéric Delsuc, Melanie Kuch, Gillian Gibb, Emil Karpinski, Dirk Hackenberger, et al.. Ancient Mitogenomes Shed Light on the Evolutionary History and Biogeography of Sloths. Current Biology - CB, Elsevier, 2019. hal-02326384 HAL Id: hal-02326384 https://hal.archives-ouvertes.fr/hal-02326384 Submitted on 22 Oct 2019 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. 1 Ancient Mitogenomes Shed Light on the Evolutionary 2 History and Biogeography of Sloths 3 Frédéric Delsuc,1,13,*, Melanie Kuch,2 Gillian C. Gibb,1,3, Emil Karpinski,2,4 Dirk 4 Hackenberger,2 Paul Szpak,5 Jorge G. Martínez,6 Jim I. Mead,7,8 H. Gregory 5 McDonald,9 Ross D. E. MacPhee,10 Guillaume Billet,11 Lionel Hautier,1,12 and 6 Hendrik N. Poinar2,* 7 Author list footnotes 8 1Institut des Sciences de l’Evolution de Montpellier -
Uma Perspectiva Macroecológica Sobre O Risco De Extinção Em Mamíferos
Universidade Federal de Goiás Instituto de Ciências Biológicas Programa de Pós-graduação em Ecologia e Evolução Uma Perspectiva Macroecológica sobre o Risco de Extinção em Mamíferos VINÍCIUS SILVA REIS Goiânia 2019 VINÍCIUS SILVA REIS Uma Perspectiva Macroecológica sobre o Risco de Extinção em Mamíferos Tese apresentada ao Programa de Pós-graduação em Ecologia e Evolução do Departamento de Ecologia do Instituto de Ciências Biológicas da Universidade Federal de Goiás como requisito parcial para a obtenção do título de Doutor em Ecologia e Evolução. Orientador: Profº Drº Matheus de Souza Lima- Ribeiro Co-orientadora: Profª Drª Levi Carina Terribile Goiânia 2019 DEDI CATÓRIA Ao meu pai Wilson e à minha mãe Iris por sempre acreditarem em mim. “Esper o que próxima vez que eu te veja, você s eja um novo homem com uma vasta gama de novas experiências e aventuras. Não he site, nem se permita dar desculpas. Apenas vá e faça. Vá e faça. Você ficará muito, muito feliz por ter feito”. Trecho da carta escrita por Christopher McCandless a Ron Franz contida em Into the Wild de Jon Krakauer (Livre tradução) . AGRADECIMENTOS Eis que a aventura do doutoramento esteve bem longe de ser um caminho solitário. Não poderia ter sido um caminho tão feliz se eu não tivesse encontrado pessoas que me ensinaram desde método científico até como se bebe cerveja de verdade. São aos que estiveram comigo desde sempre, aos que permaneceram comigo e às novas amizades que eu construí quando me mudei pra Goiás que quero agradecer por terem me apoiado no nascimento desta tese: À minha família, em especial meu pai Wilson, minha mãe Iris e minha irmã Flora, por me apoiarem e me incentivarem em cada conquista diária. -
Reveals That Glyptodonts Evolved from Eocene Armadillos
Molecular Ecology (2016) 25, 3499–3508 doi: 10.1111/mec.13695 Ancient DNA from the extinct South American giant glyptodont Doedicurus sp. (Xenarthra: Glyptodontidae) reveals that glyptodonts evolved from Eocene armadillos KIEREN J. MITCHELL,* AGUSTIN SCANFERLA,† ESTEBAN SOIBELZON,‡ RICARDO BONINI,‡ JAVIER OCHOA§ and ALAN COOPER* *Australian Centre for Ancient DNA, School of Biological Sciences, University of Adelaide, Adelaide, SA 5005, Australia, †CONICET-Instituto de Bio y Geociencias del NOA (IBIGEO), 9 de Julio No 14 (A4405BBB), Rosario de Lerma, Salta, Argentina, ‡Division Paleontologıa de Vertebrados, Facultad de Ciencias Naturales y Museo (UNLP), CONICET, Museo de La Plata, Paseo del Bosque, La Plata, Buenos Aires 1900, Argentina, §Museo Arqueologico e Historico Regional ‘Florentino Ameghino’, Int De Buono y San Pedro, Rıo Tercero, Cordoba X5850, Argentina Abstract Glyptodonts were giant (some of them up to ~2400 kg), heavily armoured relatives of living armadillos, which became extinct during the Late Pleistocene/early Holocene alongside much of the South American megafauna. Although glyptodonts were an important component of Cenozoic South American faunas, their early evolution and phylogenetic affinities within the order Cingulata (armoured New World placental mammals) remain controversial. In this study, we used hybridization enrichment and high-throughput sequencing to obtain a partial mitochondrial genome from Doedicurus sp., the largest (1.5 m tall, and 4 m long) and one of the last surviving glyptodonts. Our molecular phylogenetic analyses revealed that glyptodonts fall within the diver- sity of living armadillos. Reanalysis of morphological data using a molecular ‘back- bone constraint’ revealed several morphological characters that supported a close relationship between glyptodonts and the tiny extant fairy armadillos (Chlamyphori- nae). -
The Giant Sea Mammal That Went Extinct in Less Than Three Decades
The Giant Sea Mammal That Went Extinct in Less Than Three Decades The quick disappearance of the 30-foot animal helped to usher in the modern science of human-caused extinctions. JACOB MIKANOWSKI, THE ATLANTIC 4/19/17 HTTPS://WWW.THEATLANTIC.COM/SCIENCE/ARCHIVE/2017/04/PLEIST OSEACOW/522831/ The Pleistocene, the geologic era immediately preceding our own, was an age of giants. North America was home to mastodons and saber-tooth cats; mammoths and wooly rhinos roamed Eurasia; giant lizards and bear-sized wombats strode across the Australian outback. Most of these giants died at the by the end of the last Ice Age, some 14,000 years ago. Whether this wave of extinctions was caused by climate change, overhunting by humans, or some combination of both remains a subject of intense debate among scientists. Complicating the picture, though, is the fact that a few Pleistocene giants survived the Quaternary extinction event and nearly made it intact to the present. Most of these survivor species found refuge on islands. Giant sloths were still living on Cuba 6,000 years ago, long after their relatives on the mainland had died out. The last wooly mammoths died out just 4,000 years ago. They lived in a small herd on Wrangel Island north of the Bering Strait between the Chukchi and East Siberian Seas. Two-thousand years ago, gorilla-sized lemurs were still living on Madagascar. A thousand years ago, 12-foot-tall moa birds were still foraging in the forests of New Zealand. Unlike the other long-lived megafauna, Steller’s sea cows, one of the last of the Pleistocene survivors to die out, found their refuge in a remote scrape of the ocean instead of on land. -
Late Quaternary Extinction of Ungulates in Sub-Saharan Africa: a Reductionist's Approach
Late Quaternary Extinction of Ungulates in Sub-Saharan Africa: a Reductionist's Approach Joris Peters Ins/itu/ für Palaeoanatomie, Domestikationsforschung und Geschichte der Tiermedizin, Universität München. Feldmochinger Strasse 7, D-80992 München, Germany AchilIes Gautier Laboratorium VDor Pa/eonlo/agie, Seclie Kwartairpaleo1ltologie en Archeozoölogie, Universiteit Gent, Krijgs/aon 2811S8, B-9000 Gent, Belgium James S. Brink National Museum, P. 0. Box 266. Bloemfontein 9300. Republic of South Africa Wim Haenen Instituut voor Gezandheidsecologie, Katholieke Universiteit Leuven, Capucijnenvoer 35, B-3000 Leuven, Belgium (Received 24 January 1992, revised manuscrip/ accepted 6 November 1992) Comparative osteomorphology and sta ti st ical analysis cf postcranial limb bone measurements cf modern African wildebeest (Collnochaetes), eland (Taura/ragus) and Africa n buffala (Sy" cer"s) have heen applied to reassess the systematic affiliations between these bovids and related extinct Pleistocene forms. The fossil sam pies come from the sites of Elandsfontein (Cape Province) .nd Flarisb.d (Orange Free State) in South Afrie • . On the basis of differenees in skull morphology and size of the appendicular skeleton between fossil and modern blaek wildebeest (ConlJochaeus gnou). the subspecies name anliquus, proposed earlier to designate the Pleistoeene form, ean be retained. The same taxonomie level is accepted for the large Pleistocene e1and, whieh could be named Taurolragus oryx antiquus. The long horned or giant buffa1o, Pelorovis antiquus, can be inc1uded in the polymorphous Syncerus caffer stock and could therefore be called Syncerus caffer antiquus. The ecology of Pleistocene and modern Connochaetes, Taurolragus and Syncerus is discussed. A relationship between herbivore body size and c1imate, as Bergmann's Rule predicts, could not be demonstrated. -
Straight-Tusked Elephant (Palaeoloxodon Antiquus) and Other Megafauna in Europe
The World of Elephants - International Congress, Rome 2001 The Late Quaternary extinction of woolly mammoth (Mammuthus primigenius), straight-tusked elephant (Palaeoloxodon antiquus) and other megafauna in Europe A.J. Stuart, A.M. Lister Department of Biology, University College, London, UK [email protected] We are engaged in a research project (funded at present, it is apparent that these range changes by the Natural Environment Research Council - were not the same for each species; for example NERC) on megafaunal extinctions throughout the “last stands” of Mammuthus primigenius, Europe within the period ca. 50,000 to 9000 14C Megaloceros giganteus and Palaeoloxodon years BP. The work involves a survey of strati- antiquus appear to have been made in very dif- graphic information and available 14C dates, and ferent regions of Europe. Tracking these changes also sampling crucial material for a major involves firstly gathering data from the literature programme of AMS 14C dating. Both of the and from colleagues in each region. By these elephant species present in the European Late means we are building up an approximate pic- Pleistocene: Mammuthus primigenius and ture and specifying the likely latest material of Palaeoloxodon antiquus are included in the our target species for each region. In order to project. obtain a much more accurate database, we are Our target species include most of those that sampling the putatively latest material and sub- became extinct, or regionally extinct, after mitting it for 14C dating. ca. 15,000 BP: woolly mammoth Mammuthus Late Quaternary extinctions have been vari- primigenius, woolly rhinoceros Coelodonta ously attributed to overkill by human hunters antiquitatis; giant deer Megaloceros giganteus; (Martin 1984; Martin & Steadman 1999), to lion Panthera leo; and spotted hyaena Crocuta environmental changes (Graham & Lundelius crocuta. -
Extinct Mammal Used Its 'Sweet Spot' to Club Rivals 27 August 2009, by Lin Edwards
Extinct Mammal Used its 'Sweet Spot' to Club Rivals 27 August 2009, by Lin Edwards Blanco and his colleagues Washington W. Jones, and Andres Rinderknecht, decided to use the same methods as the sports studies to determine the location of the sweet spot on the tails of the glyptodonts. They studied fossilized remains of glyptodonts in the collections of three South American museums, and found that in many species of glyptodonts, such as Doedicurus clavicaudatus, the ball of bony plates at the end of Artistic reconstruction of Doedicurus clavicaudatus, with the tail was located at the center of percussion. a human for scale. The distal rigid caudal sheath and the mobile free rings are shown. Adapted from Ubilla et al. The plates were fused, turning the tail into a rigid (2008) (fig. 13.3, with permission of Perea, D. ed. 2008). weapon that concentrated the force onto the sweet spot in the tail's club, which is believed to have been covered in large horny spikes. The scientists likened the flexible part of the glyptodont's tail to a (PhysOrg.com) -- Scientists in Uruguay studying tennis player's arm, and the rigid club at the end of extinct mammals called glyptodonts have the tail to the tennis racket, with the sweet spot discovered they used a "sweet spot" in their tails, under the largest spikes. just like baseball players use the center of percussion (CP), or sweet spot, in their bats to hit Having the sweet spot in the position of the largest the ball with maximum power and minimum chance spikes meant the glyptodont tail clubs must have of injury. -
Overkill, Glacial History, and the Extinction of North America's Ice Age Megafauna
PERSPECTIVE Overkill, glacial history, and the extinction of North America’s Ice Age megafauna PERSPECTIVE David J. Meltzera,1 Edited by Richard G. Klein, Stanford University, Stanford, CA, and approved September 23, 2020 (received for review July 21, 2020) The end of the Pleistocene in North America saw the extinction of 38 genera of mostly large mammals. As their disappearance seemingly coincided with the arrival of people in the Americas, their extinction is often attributed to human overkill, notwithstanding a dearth of archaeological evidence of human predation. Moreover, this period saw the extinction of other species, along with significant changes in many surviving taxa, suggesting a broader cause, notably, the ecological upheaval that occurred as Earth shifted from a glacial to an interglacial climate. But, overkill advocates ask, if extinctions were due to climate changes, why did these large mammals survive previous glacial−interglacial transitions, only to vanish at the one when human hunters were present? This question rests on two assumptions: that pre- vious glacial−interglacial transitions were similar to the end of the Pleistocene, and that the large mammal genera survived unchanged over multiple such cycles. Neither is demonstrably correct. Resolving the cause of large mammal extinctions requires greater knowledge of individual species’ histories and their adaptive tolerances, a fuller understanding of how past climatic and ecological changes impacted those animals and their biotic communities, and what changes occurred at the Pleistocene−Holocene boundary that might have led to those genera going extinct at that time. Then we will be able to ascertain whether the sole ecologically significant difference between previous glacial−interglacial transitions and the very last one was a human presence. -
Incorporating a Deeper Temporal Perspective Into Modern Ecology Felisa A
opinion and perspectives ISSN 1948-6596 perspective Losing time? Incorporating a deeper temporal perspective into modern ecology Felisa A. Smith1 and Alison G. Boyer2 1Department of Biology, University of New Mexico, Albuquerque, NM 87131, USA. [email protected]; http://biology.unm.edu/fasmith/ 2Department of Ecology and Evolutionary Biology, University of Tennessee, Knoxville, TN 37996, USA. [email protected]; http://eeb.bio.utk.edu/boyer/index.html Abstract. Ecologists readily acknowledge that a temporal perspective is essential for untangling ecological complexity, yet most studies remain of relatively short duration. Despite a number of excellent essays on the topic, only recently have ecologists begun to explicitly incorporate a historical component. Here we provide several concrete examples drawn largely from our own work that clearly illustrate how the adoption of a longer temporal perspective produces results significantly at odds with those obtained when relying solely on modern data. We focus on projects in the areas of conservation, global change and macroecology because such work often relies on broad-scale or synthetic data that may be heavily influenced by historic or prehistoric anthropogenic factors. Our analysis suggests that considerable care should be taken when extrapolating from studies of extant systems. Few, if any, modern systems have been unaffected by anthropogenic influences. We encourage the further integration between paleoecologists and ecologists, who have been historically segregated into different departments, scientific societies and scientific cultures. Keywords: climate change, conservation, macroecology, paleoecology, palaeoecology, woodrat The pronghorn (Antilocapra americana) is a nature of animals like the pronghorn, but more as quintessential symbol of the Great Plains. -
The Reconfiguration of Seed-Dispersal Interactions After Megafaunal Extinction
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Biblioteca Digital da Produção Intelectual da Universidade de São Paulo (BDPI/USP) Universidade de São Paulo Biblioteca Digital da Produção Intelectual - BDPI Departamento de Ecologia - IB/BIE Artigos e Materiais de Revistas Científicas - IB/BIE 2014-05 Reconstructing past ecological networks: the reconfiguration of seed-dispersal interactions after megafaunal extinction Oecologia, Heidelberg, v.175, n.4, p.1247-1256, 2014 http://www.producao.usp.br/handle/BDPI/45245 Downloaded from: Biblioteca Digital da Produção Intelectual - BDPI, Universidade de São Paulo Oecologia (2014) 175:1247–1256 DOI 10.1007/s00442-014-2971-1 PLANT-MICROBE-ANIMAL INTERACTIONS - ORIGINAL RESEARCH Reconstructing past ecological networks: the reconfiguration of seed‑dispersal interactions after megafaunal extinction Mathias M. Pires · Mauro Galetti · Camila I. Donatti · Marco A. Pizo · Rodolfo Dirzo · Paulo R. Guimarães Jr. Received: 16 December 2013 / Accepted: 9 May 2014 / Published online: 28 May 2014 © Springer-Verlag Berlin Heidelberg 2014 Abstract The late Quaternary megafaunal extinction extinction and the arrival of humans changed how seed impacted ecological communities worldwide, and affected dispersers were distributed among network modules. How- key ecological processes such as seed dispersal. The traits ever, the recent introduction of livestock into the seed- of several species of large-seeded plants are thought to have dispersal system partially restored the original network evolved in response to interactions with extinct megafauna, organization by strengthening the modular configuration. but how these extinctions affected the organization of inter- Moreover, after megafaunal extinctions, introduced species actions in seed-dispersal systems is poorly understood. -
Mammalia, Xenarthra)
AMEGHINIANA (Rev. Asoc. Paleontol. Argent.) - 41 (4): 651-664. Buenos Aires, 30-12-2004 ISSN 0002-7014 Functional and phylogenetic assessment of the masticatory adaptations in Cingulata (Mammalia, Xenarthra) Sergio F. VIZCAÍNO1, Richard A. FARIÑA2, M. Susana BARGO1 and Gerardo DE IULIIS3 Abstract. Cingulata -armadillos, pampatheres and glyptodonts- are among the most representative of South American Cenozoic mammalian groups. Their dental anatomy is characterised by homodonty, hypselodonty, and the absence of enamel in almost all known species. It has been proposed that these peculiarities are related to a primitive adaptation to insectivory and that they represent a strong phylogenetic constraint that restricted, or at least conditioned, adaptations toward other ali- mentary habits. However, the great diversity of forms recorded suggests a number of adaptive possibilities that range from specialised myrmecophagous species to carrion-eaters or predators among the animalivorous, and from selective browsers to bulk grazers among herbivores, as well as omnivores. Whereas armadillos (Dasypodidae) developed varied habits, mostly an- imalivorous but also including omnivores and herbivores, pampatheres (Pampatheriidae) and glyptodonts (Glyptodontidae) were herbivores. Morphofunctional and biomechanical studies have permitted a review of previous hypotheses based solely on comparative morphology. While in some cases these were refuted (carnivory in peltephiline armadillos), they were corrob- orated (carnivory in armadillos of the genus Macroeuphractus; -
Patterns of Late Quaternary Megafaunal Extinctions in Europe and Northern Asia
Cour. Forsch.-Inst. Senckenberg | 259 | 287 – 297 | 2 Figs | Frankfurt a. M., 13. 12. 2007 Patterns of Late Quaternary megafaunal extinctions in Europe and northern Asia With 2 figs Anthony J. STUART & Adrian M. LISTER A b s t r a c t This paper summarizes the results so far of our ‘Late Quaternary Megafaunal Extinctions’ project, focussing on an assessment of latest available dates for selected target species from Europe and northern Asia. Our approach is to directly radiocarbon-date material of extinct megafauna to construct their spatio-temporal histories, and to seek correlations with the environmental and archaeological records with the aim of estab- lishing the cause or causes of extinction. So far we have focussed on Mammuthus primigenius, Coelodonta antiquitatis, and Megaloceros giganteus, and are accumulating data on Panthera leo/spelaea, Crocuta crocuta and Ursus spelaeus. Attempts to date Palaeoloxodon antiquus and Stephanorhinus hemitoechus (from southern Europe) were largely unsuccessful. The pattern of inferred terminal dates is staggered, with extinctions occurring over ca. 30 millennia, with some species previously thought extinct in the Late Pleistocene – M. primigenius and M. giganteus – surviving well into the Holocene. All species show dramatic range shifts in response to climatic/vegeta- tional changes, especially the beginning of the Last Glacial Maximum, Late Glacial Interstadial, Allerød, Younger Dryas and Holocene, and there was a general trend of progressive range reduction and fragmenta- tion prior to final extinction. With the possible exceptions of P. antiquus, S. hemitoechus and Homo nean- derthalensis, extinctions do not correlate with the appearance of modern humans. However, although most of the observed patterns can be attributed to environmental changes, some features – especially failures to recolonize – suggest human involvement.