Relation Between Herbivore Abundance, Herbivore Diversity and Vegetation Diversity
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The Importance of Herbivore Density and Management As Determinants
1 The importance of herbivore density and management as 2 determinants of the distribution of rare plant species 3 James D. M. Speed* & Gunnar Austrheim 4 NTNU University Museum 5 Norwegian University of Science and Technology 6 NO-7491 Trondheim 7 Norway 8 *Correspondence: 9 +47 73592251 10 [email protected] 11 12 Speed, J.D.M. & Austrheim, G. (2017) The importance of herbivore density and management as 13 determinants of the distribution of rare plant species. Biological Conservation, 205, 77-84. 14 Post-print: Final version available here http://dx.doi.org/10.1016/j.biocon.2016.11.030 15 16 Abstract 17 Herbivores are often drivers of ecosystem states and dynamics and in many situations are managed 18 either as livestock or through controlled or exploitative hunting of wild populations. Changes in 19 herbivore density can affect the composition of plant communities. Management of herbivore 20 densities could therefore be regulated to benefit plant species of conservation concern. In this study 21 we use a unique spatial dataset of large herbivores in Norway to test whether herbivore density 22 affects the distribution of rare red-listed plant species in tundra ecosystems, and to identify regions 23 where herbivore density is the most important factor in determining the habitat suitability for the 24 plant species. For all selected species a climatic variable was the most important determinant of the 25 distribution, but herbivore density was an important determinant of some species notably Primula 26 scandinavica. Herbivore density was the most important factor determining habitat suitability for this 27 species in 13% of mainland Norway. -
Species-Habitat Associations
Species-Habitat associations Spatial Data • Predictive Models • Ecological Insights Jason Matthiopoulos • John Fieberg • Geert Aarts 2 Suggested Citation: Matthiopoulos, Jason; Fieberg, John; Aarts, Geert. (2020). Species-Habitat Associations: Spatial data, predictive models, and ecological insights. University of Minnesota Libraries Publishing. Retrieved from the University of Minnesota Digital Conservancy, http://hdl.handle.net/11299/217469. Related Works: A copy of the book, which we plan to continuously update (with new versions in the future) can be accessed in gitbook format at: https://bookdown.org/jfieberg/SHABook/. Cover photograph: Guanacos, a camelid native to South America, grazing in Torres del Paine National Park in the Pantagonia region of Chile. ©Gary R. Jensen, www.GaryRobertPhotography.com. License: This work, other than the cover photo, is licensed under a Creative Commons Attribution 4.0 International License. ISBN: 978-1-946135-68-1 Edition 1 Contents 5 About the Authors 6 Jason Matthiopoulos . .6 John Fieberg . .6 Geert Aarts . .6 Acknowledgments 7 Abbreviations 8 Glossary 9 Notation 15 Preface 16 0.1 A “live” project . 16 0.2 Audience . 16 0.3 Objectives . 17 0.4 Why is this book unique? . 17 0.5 Why model species habitat associations? . 18 I Fundamental concepts and methods 20 1 The ecology behind species-habitat-association models 21 1.1 Objectives . 21 1.2 How do living beings “see” the world around them? . 21 1.3 What is a habitat? . 23 1.4 What is a species-habitat association? . 24 1.5 What mechanisms drive habitat-mediated changes in species densities? . 26 1.6 When is species density a reliable reflection of habitat suitability? . -
Functional Benefits of Predator Species Diversity Depend on Prey Identity
Ecological Entomology (2005) 30, 497–501 Functional benefits of predator species diversity depend on prey identity A. WILBY1 , S. C. VILLAREAL2 ,L.P.LAN3 ,K.L.HEONG2 and 1 M. B. THOMAS 1Department of Agricultural Sciences and NERC Centre for Population Biology, Imperial College London, U.K., 2International Rice Research Institute, Metro Manila, Philippines and 3Institute of Agricultural Sciences of South Vietnam, Ho Chi Minh City, Vietnam Abstract. 1. Determining the functional significance of species diversity in nat- ural enemy assemblages is a key step towards prediction of the likely impact of biodiversity loss on natural pest control processes. While the biological control literature contains examples in which increased natural enemy diversity hinders pest control, other studies have highlighted mechanisms where pest suppression is promoted by increased enemy diversity. 2. This study aimed to test whether increased predator species diversity results in higher rates of predation on two key, but contrasting, insect pest species commonly found in the rice ecosystems of south-east Asia. 3. Glasshouse experiments were undertaken in which four life stages of a planthopper (Nilaparvata lugens) and a moth (Marasmia patnalis) were caged with single or three-species combinations of generalist predators. 4. Generally, predation rates of the three-species assemblages exceeded expec- tation when attacking M. patnalis, but not when attacking N. lugens. In addition, a positive effect of increased predator species richness on overall predation rate was found with M. patnalis but not with N. lugens. 5. The results are consistent with theoretical predictions that morphological and behavioural differentiation among prey life stages promotes functional com- plementarity among predator species. -
Species Richness, Species–Area Curves and Simpson's Paradox
Evolutionary Ecology Research, 2000, 2: 791–802 Species richness, species–area curves and Simpson’s paradox Samuel M. Scheiner,1* Stephen B. Cox,2 Michael Willig,2 Gary G. Mittelbach,3 Craig Osenberg4 and Michael Kaspari5 1Department of Life Sciences (2352), Arizona State University West, P.O. Box 37100, Phoenix, AZ 85069, 2Program in Ecology and Conservation Biology, Department of Biological Sciences and The Museum, Texas Tech University, Lubbock, TX 79409, 3W.K. Kellogg Biological Station, 3700 E. Gull Lake Drive, Michigan State University, Hickory Corners, MI 49060, 4Department of Zoology, University of Florida, Gainesville, FL 32611 and 5Department of Zoology, University of Oklahoma, Norman, OK 73019, USA ABSTRACT A key issue in ecology is how patterns of species diversity differ as a function of scale. The scaling function is the species–area curve. The form of the species–area curve results from patterns of environmental heterogeneity and species dispersal, and may be system-specific. A central concern is how, for a given set of species, the species–area curve varies with respect to a third variable, such as latitude or productivity. Critical is whether the relationship is scale-invariant (i.e. the species–area curves for different levels of the third variable are parallel), rank-invariant (i.e. the curves are non-parallel, but non-crossing within the scales of interest) or neither, in which case the qualitative relationship is scale-dependent. This recognition is critical for the development and testing of theories explaining patterns of species richness because different theories have mechanistic bases at different scales of action. -
Loss of Microsatellite Diversity and Low Effective Population Size in an Overexploited Population of New Zealand Snapper (Pagrus Auratus)
Loss of microsatellite diversity and low effective population size in an overexploited population of New Zealand snapper (Pagrus auratus) Lorenz Hauser*†, Greg J. Adcock*‡, Peter J. Smith§, Julio H. Bernal Ramı´rez*¶, and Gary R. Carvalho* *Molecular Ecology and Fisheries Genetics Laboratory, Department of Biological Sciences, University of Hull, Hull HU6 7RX, United Kingdom; and §National Institute of Water and Atmospheric Research, P.O. Box 14901, Wellington, New Zealand Edited by John C. Avise, University of Georgia, Athens, GA, and approved June 27, 2002 (received for review April 23, 2002) Although the effects of overfishing on species diversity and abun- ered being in danger of losing genetic diversity (8), and so there dance are well documented, threats to the genetic diversity of appears to be little cause for concern from a genetic perspective. marine fish populations have so far been largely neglected. Indeed, On the other hand, the number of fish in a population (census there seems to be little cause for concern, as even ‘‘collapsed’’ population size, N) is often much larger than the genetically stocks usually consist of several million individuals, whereas pop- effective population size (Ne), which determines the genetic ulation genetics theory suggests that only very small populations properties of a population (12). The long-term evolutionary Ne suffer significant loss of genetic diversity. On the other hand, in is often orders of magnitude smaller than current population many marine species the genetically effective population size (Ne), sizes, probably because of historic population bottlenecks, ‘‘se- which determines the genetic properties of a population, may be lective sweeps,’’ or colonization histories (13). -
European Gradients of Resilience in the Face of Climate Extremes
EUROPEAN GRADIENTS OF RESILIENCE IN THE FACE OF CLIMATE EXTREMES POLICY BRIEF Field site in Belgium with rainout shelters deployed in 2013 ©Sigi Berwaers This policy brief is based on the results Extreme weather events and the presence of invasive species can act as of the BiodivERsA-funded project pressures threatening biodiversity, resilience and ecosystem services of semi- ‘SIGNAL’ addressing the interaction of three major research areas, combined natural grasslands and drive them beyond thresholds of system integrity in ecology for the first time: biodiversity (tipping points and regime shifts). On the other hand, biodiversity itself may experiments, climate change research, and invasion research. The project made use buffer ecosystem functioning and services against change. Potential stabilising of coordinated experiments in different mechanisms include species richness, presence of key species such as legumes climates across Europe, thereby increasing and within-species diversity. These potential buffers can be promoted by the scope and relevance of the results. conservation management and policy adjustments. K EY POLICY RECOMMENDATIONS • Local biodiversity should be actively stimulated or preserved across European grasslands in order to increase the stability of ecosystem service provisioning, which is especially relevant as climate extremes are expected to become more frequent and intense. • Adjustment of mowing frequency and cutting height can help maintain or increase biodiversity. • More explicit consideration of within-species diversity is warranted, as this component of biodiversity can contribute to stabilising ecosystem functioning in the face of climate extremes. • Ecosystem responses to climate extremes of similar magnitude can vary significantly between climates and regions, suggesting that targeted policy requires tailor-made impact predictions. -
"Species Richness: Small Scale". In: Encyclopedia of Life Sciences (ELS)
Species Richness: Small Advanced article Scale Article Contents . Introduction Rebecca L Brown, Eastern Washington University, Cheney, Washington, USA . Factors that Affect Species Richness . Factors Affected by Species Richness Lee Anne Jacobs, University of North Carolina, Chapel Hill, North Carolina, USA . Conclusion Robert K Peet, University of North Carolina, Chapel Hill, North Carolina, USA doi: 10.1002/9780470015902.a0020488 Species richness, defined as the number of species per unit area, is perhaps the simplest measure of biodiversity. Understanding the factors that affect and are affected by small- scale species richness is fundamental to community ecology. Introduction diversity indices of Simpson and Shannon incorporate species abundances in addition to species richness and are The ability to measure biodiversity is critically important, intended to reflect the likelihood that two individuals taken given the soaring rates of species extinction and human at random are of the same species. However, they tend to alteration of natural habitats. Perhaps the simplest and de-emphasize uncommon species. most frequently used measure of biological diversity is Species richness measures are typically separated into species richness, the number of species per unit area. A vast measures of a, b and g diversity (Whittaker, 1972). a Di- amount of ecological research has been undertaken using versity (also referred to as local or site diversity) is nearly species richness as a measure to understand what affects, synonymous with small-scale species richness; it is meas- and what is affected by, biodiversity. At the small scale, ured at the local scale and consists of a count of species species richness is generally used as a measure of diversity within a relatively homogeneous area. -
Plant Species Diversity, Plant Biomass and Responses of the Soil Community on Abandoned Land Across Europe: Idiosyncracy Or Above-Belowground Time Lags
Plant species diversity, plant biomass and responses of the soil community on abandoned land across Europe: idiosyncracy or above-belowground time lags Hedlund, Katarina; Regina, IS; Van der Putten, WH; Leps, J; Diaz, T; Korthals, GW; Lavorel, S; Brown, VK; Gormsen, Dagmar; Mortimer, SR; Barrueco, CR; Roy, J; Smilauer, P; Smilauerova, M; Van Dijk, C Published in: Oikos DOI: 10.1034/j.1600-0706.2003.12511.x 2003 Link to publication Citation for published version (APA): Hedlund, K., Regina, IS., Van der Putten, WH., Leps, J., Diaz, T., Korthals, GW., Lavorel, S., Brown, VK., Gormsen, D., Mortimer, SR., Barrueco, CR., Roy, J., Smilauer, P., Smilauerova, M., & Van Dijk, C. (2003). Plant species diversity, plant biomass and responses of the soil community on abandoned land across Europe: idiosyncracy or above-belowground time lags. Oikos, 103(1), 45-58. https://doi.org/10.1034/j.1600- 0706.2003.12511.x Total number of authors: 15 General rights Unless other specific re-use rights are stated the following general rights apply: Copyright and moral rights for the publications made accessible in the public portal are retained by the authors and/or other copyright owners and it is a condition of accessing publications that users recognise and abide by the legal requirements associated with these rights. • Users may download and print one copy of any publication from the public portal for the purpose of private study or research. • You may not further distribute the material or use it for any profit-making activity or commercial gain • You may freely distribute the URL identifying the publication in the public portal Read more about Creative commons licenses: https://creativecommons.org/licenses/ Take down policy If you believe that this document breaches copyright please contact us providing details, and we will remove access to the work immediately and investigate your claim. -
Towards an Integrative Understanding of Soil Biodiversity
Towards an integrative understanding of soil biodiversity Madhav Thakur, Helen Phillips, Ulrich Brose, Franciska de Vries, Patrick Lavelle, Michel Loreau, Jérôme Mathieu, Christian Mulder, Wim van der Putten, Matthias Rillig, et al. To cite this version: Madhav Thakur, Helen Phillips, Ulrich Brose, Franciska de Vries, Patrick Lavelle, et al.. Towards an integrative understanding of soil biodiversity. Biological Reviews, Wiley, 2020, 95, pp.350 - 364. 10.1111/brv.12567. hal-02499460 HAL Id: hal-02499460 https://hal.archives-ouvertes.fr/hal-02499460 Submitted on 5 Mar 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Biol. Rev. (2020), 95, pp. 350–364. 350 doi: 10.1111/brv.12567 Towards an integrative understanding of soil biodiversity Madhav P. Thakur1,2,3∗ , Helen R. P. Phillips2, Ulrich Brose2,4, Franciska T. De Vries5, Patrick Lavelle6, Michel Loreau7, Jerome Mathieu6, Christian Mulder8,WimH.Van der Putten1,9,MatthiasC.Rillig10,11, David A. Wardle12, Elizabeth M. Bach13, Marie L. C. Bartz14,15, Joanne M. Bennett2,16, Maria J. I. Briones17, George Brown18, Thibaud Decaens¨ 19, Nico Eisenhauer2,3, Olga Ferlian2,3, Carlos Antonio´ Guerra2,20, Birgitta Konig-Ries¨ 2,21, Alberto Orgiazzi22, Kelly S. -
Effect of Dietary Concentrate to Forage Ratio on Growth Performance
Effect of dietary concentrate to forage ratio on growth performance, rumen fermentation and bacterial diversity of Tibetan sheep under barn feeding on the Qinghai-Tibetan plateau Hongjin Liu1,2,3,*, Tianwei Xu1,2,*, Shixiao Xu1, Li Ma1,2,3, Xueping Han1,3,4, Xungang Wang1,2,3, Xiaoling Zhang1,2,3, Linyong Hu1,2, Na Zhao1,2, Yongwei Chen4, Li Pi1 and Xinquan Zhao1,2 1 Northwest Institue of Plateau Biology, Chinese Academy of Science, Xining, China 2 Key Laboratory of Adaptation and Evolution of Plateau Biota, Chinese Academy of Sciences, Xining, China 3 University of Chinense Academy of Sciences, Beijing, China 4 Technology Extension Service of Animal Husbandry of Qinghai, Xining, China * These authors contributed equally to this work. ABSTRACT This study aimed to research the effects of different dietary concentrate to forage (C:F) ratio on growth performance, rumen fermentation and bacteria diversity of barn feeding Tibetan sheep. The experiment contains fiver treatments (HS1, HS2 HS3, HS4 and HS5; n D 8, respectively) based on dietary C:F ratios 0:100, 15:85, 30:70, 45:55, and 60:40, respectively. The ruminal bacterial community structure was investigated through high-throughput sequencing of 16S rRNA genes in V4 hypervariable region. The results showed that increasing dietary concentrate feed level from 0% to 60% exerted a positive effect on DMI, BW gain, gain rate and feed conversation ratio (FCR) in Tibetan sheep. The increases dietary concentrate feed level elevatedNH3-N, propionate and valerate concentrations, whereas, reduced molar ratio of acetate to propionate (A/P ratio) (P < 0:05). For rumen bacterial diversity, increases in dietary concentrate Submitted 24 February 2019 content contributed to lower alpha diversity indexes including Shannon wiener, Chao1 Accepted 11 July 2019 and observed species, meanwhile, significantly increased the abundances of the phylum Published 5 August 2019 Bacteroidetes and the genus Prevotella_1 (P < 0:05). -
Community Diversity
Community Diversity Topics What is biodiversity and why is it important? What are the major drivers of species richness? Habitat heterogeneity Disturbance Species energy theory Metobolic energy theory Dynamic equilibrium hypothesis (interactions among disturbance and energy) Resource ratio theory How does biodiversity influence ecosystem function? Biodiversity and ecosystem function hypothesis Integration of biodiversity theory How might the drivers of species richness and hence levels of species richness differ among biomes? Community Diversity Defined Biodiversity Merriam-Webster - the existence of many different kinds of plants and animals in an environment. Wikipedia - the degree of variation of life forms within a given species, ecosystem, biome, or an entire planet. U.S. Congress Office of Technology Assessment - the variety and variability among living organisms and the ecological complexes in which they occur. Diversity can be defined as the number of different items and their relative frequency. For biological diversity, these items are organized at many levels, ranging from complete ecosystems to the chemical structures that are the molecular basis of heredity. Thus, the term encompasses different ecosystems, species, genes, and their relative abundance." Community Diversity Defined Species richness - Species evenness - Species diversity - Community Diversity Defined Species richness - number of species present in the community (without regard for their abundance). Species evenness - relative abundance of the species that are -
Extending Species-Area Relationships (SAR) to Diversity-Area Relationships (DAR)©
Extending species-area relationships (SAR) to diversity-area relationships (DAR)© Zhanshan (Sam) Ma Computational Biology and Medical Ecology Lab State Key Lab of Genetic Resources and Evolution Kunming Institute of Zoology Chinese Academy of Sciences Kunming 650223, China [email protected] Abstract Aim: I extend the traditional SAR, which has achieved status of ecological law and plays a critical role in global biodiversity assessment, to the general (alpha- or beta-diversity in Hill numbers) diversity area relationship (DAR). The extension was motivated to remedy the limitation of traditional SAR that only address one aspect of biodiversity scaling—species richness scaling over space. Innovation: The extension was made possible by the fact that all Hill numbers are in units of species (referred to as the effective number of species or as species equivalents), and I postulated that Hill numbers should follow the same or similar pattern of SAR. I selected three DAR models, the traditional power law (PL), PLEC (PL with exponential cutoff) and PLIEC (PL with inverse exponential cutoff). I defined three new concepts and derived their quantifications: (i) DAR profile—z-q series where z is the PL scaling parameter at different diversity order (q); (ii) PDO (pair-wise diversity overlap) profile—g-q series where g is the PDO corresponding to q; (iii) MAD (maximal accrual diversity) profile—Dmax-q series where Dmax is the MAD corresponding to q. Furthermore, the PDO-g is quantified based on the self- similarity property of the PL model, and Dmax can be estimated from the PLEC parameters. The three profiles constitute a novel DAR approach to biodiversity scaling.