Index for Volume 45 (1996)

COMPILED BY TROY L. BEST Downloaded from https://academic.oup.com/sysbio/article/45/4/628/1682310 by guest on 28 September 2021 18S rDNA, 223-246 component, 151-167 DNA-DNA hybridization data, 586-595 experimental, 261-277 Acanthopleura, 236-246 finite mixture, 67-78 japonica, 225 morphometric, 344-362 Accuracy of neighbor joining for n-taxon trees, Kor- binian Strimmer and Arndt von Haeseler, 516- patterned covariance matrix, 135-150 523 phylogenetic, 261-277, 415-^50 Aechmophorus separate, 393-^14 clarkii, 586, 587, 589, 590, 592 Anatidae, 415, 449 occidentalis, 586-590 Andira, 496-515 Aegilops, 532, 535 anthelmia, 497, 498, 500, 505, 507 bicornis, 526 carvalhoi, 498 comosa, 526 cordata, 498 longissima, 526 fraxinifolia, 498, 500, 505, 507, 509 searsii, 526 galeottiana, 500, 505, 510, 515 sharonensis, 526 grandistipula, 498, 500, 507, 510, 515 speltoides, 526, 531 humilis, 497, 498, 500, 505, 507, 509, 515 tauschii, 526, 531 inermis, 498, 500, 507, 511 umbellulata, 526 kgalis, 498, 500, 505, 507, 510 uniaristata, 526 macrothyrsa, 497, 498, 500, 515 Aegithalos, 484, 488, 493 nitida, 498, 500, 505 fuliginosus, 478, 492, 494 ormosioides, 498, 500, 507, 508 Agnostus, 194, 221, 222 parviflora, 498, 500, 507 Agropyron surinamensis, 500, 505 cristatum, 526, 531 unifoliolata, 498, 500, 507, 515 mongolicum, 526 vermifuga, 500, 505, 515 Ailuropoda, 176-178 Anemonia, 236-246 melanoleuca, 181 sulcata, 225 Ailurus, 175-179, 182, 184, 187 Anhima, 419 fulgens, 181 Anhimidae, 419, 440, 445 Alauda, 480, 481, 483^85 Anomalocaris, 192, 196, 206, 209-212, 218-222 arvensis, 478, 486, 492, 494 nathorsti, 194 Alaudidae, 478, 486 Anser, 415, 420, 422, 424^28, 430, 434 Alcataenia, 61 albifrons, 416, 417, 423, 445, 446, 448, 449 Aligned sequences, 127-134 anser, 416, 423, 429, 446-449 Allenopithecus nigroviridis, 73 brachyrhynchus, 416, 423, 432, 448, 449 Alligator, 394, 400-403, 407, 411 caerulescens, 417, 423, 426, 432, 414 449 mississippiensis, 95, 396, 399, 405, 406 canagicus, 416, 423, 447-449 sinensis, 396, 406 cygnoides, 416, 423, 429, 440, 443, 447-449 Alligatoridae, 411 erythropus, 416, 423, 445, 446, 448, 449 Allometry, 135-150 fabalis, 416, 423, 432, 447-449 Alopochen, 445 flavirostris, 446 indicus, 416, 421, 423, 425, 447-449 caraya, 73 rossn, 416, 423, 426, 432, 444, 44^449 palliata, 73 rubrirostris, 423, 429, 448 seniculus, 73 Anseranas, 440-443, 445, 449 Among-site rate variation, 375-380 semipalmata, 419 Amphicyonidae, 175-178, 182-184, 187 Anseranatidae, 419, 449 Analysis, Anseriformes, 415-450 combined, 393-414 Anserinae, 415-450 comparative, 415-450 Anthoscopus, 485, 486 628 1996 629

minutus, 478, 494 leucopsis, 416, 421, 432, 446^49 Aotus trivirgatus, 73 ruficollis, 416, 421, 429, 432, 446-449 Apeltes, 266 sandvicensis, 416, 420, 429, 440, 441, 444, 446-449 quadracus, 272 Brisaster, 315 Application of phylogenetic taxonomy to poorly re- latifrons, 310, 312, 319 solved crown clades: a stem-modified node-based Bromus, 534 definition of Rodentia, Andre R. Wyss and Jin inermis, 526 Meng, 559-568 tectorum, 526 Apteryx, 401 Bryant, Harold N., Explicitness, stability, and univer-

australis, 396, 397 sality in the phylogenetic definition and usage of Downloaded from https://academic.oup.com/sysbio/article/45/4/628/1682310 by guest on 28 September 2021 Arachnoides, 313, 315 taxon names: a case study of the phylogenetic tax- placenta, 312 onomy of the Carnivora (Mammalia), 174-189 Arachnothera, 480, 482^84 Bull, J. ]., see Huelsenbeck, John P., and — longirostra, 478, 492, 494 Burgessia, 194, 206, 217, 219-222 Arbacia punctulata, 310 Artemia, 236-246 Cacajao calvus, 73 salina, 225 Caenorhabditis, 236-246 Arthropleura, 190, 194, 221, 222 elegans, 225, 233 Arthropod, 190-222 Assigning edge lengths, 516-523 Caiman, 394, 400-403, 406, 411 Associations, historical, 48-66 crocodilus, 396 Asteraceae, 171, 172, 509 latirostris, 396, 408, 412 Asthenosoma, 313 Callicebus moloch, 73 ijimai, 310, 312, 315 personatus, 73 Ateles Callimico goeldi, 73 behebuth, 73 fuscipes, 73 argentata, 73 geoffroyi, 73 jacchus, 73 paniscus, 73 Aulorhynchidae, 262 penicillata, 73 Auriparus, 473, 480, 483-487 Calyptomena, 479, 481, 484 inridzs, 478, 492, 494 flaviceps, 478, 485, 494 Cambaridae, 1-26 Australopyrum, 535 Cambarus, 3, 15 pectinatum, 526 hubbsi, 5 retrofractum, 526, 531 velutinum, 526, 531 maculatus, 5 w, 194, 208, 209, 221, 222 Cambrian, 190-222 Cambropodus, 207 Canadaspis, 194, 221, 222 Baeolopfms, 474, 487 Canary Islands, lizards, 335-343 Balance, 115-118 Canidae, 180, 184, 186 Barchyteks arachnoides, 73 Canis familiaris, 182 Basolo, Alexandra L., The phylogenetic distribution of Cannatella, David C, Editorial comment: Systematic a female preference, 290-307 Biology and the World Wide Web, 125-126 Bassariscus, 179, 181 Cardiodictyon, 194, 208, 212, 218, 220-222 Bat dispersal, 496-515 Care, parental, 278-289 Bernissartia, 397 Carnivora, 174-189 fagesii, 396 Caudata, 451^72 Biases, preexisting, 290-307 Cebuella pygmaea, 73 Biogeography, 48-66 Cebus Biologist, on becoming a, John Janovy, Jr. (rev.), 609 albifrons, 73 Black, Heather, see Thorpe, Roger S., — apella, 73 Bomakellia, 194, 195, 198, 206, 207, 211, 212, 221, 222 Central moments and probability distributions of Bos, 554, 555 three measures of phylogenetic tree imbalance, BPA, 48-66 James S. Rogers, 99-110 Branches, long, 223-246, 363-374 Cercocebus Branching, 168-173 albigena, 73 Branchiostoma, 236-246 galeritus, 73 floridae, 225 torquatus, 73 Branta, 415, 422^28, 430, 434 Cercopithecus bernicla, 417, 421, 432, 447-449 aethiops, 73 canadensis, 417, 420, 429, 430, 445-449 ascanius, 73 hrota, 421, 432, 443, 448 cephus, 73 hylobadistes, 417, 420, 423-425,433,440, 441,448, 449 fl, 73 630 SYSTEMATIC BIOLOGY VOL. 45

mitis, 73 phylogenetic, 524-545 mona, 73 temporal, 151-167 neglectus, 73 Conjugations, Hadamard, 596-606 nictitans, 73 Consistency, 111-115 Cereopsis, 420, 422-430, 432, 433, 440, 441, 446, 447 Constraints on protein evolution and the age of the navaehollandiae, 415, 416, 421, 443, 445, 448, 449 eubacteria/eukaryote split, Michael M. Miyamo- Certhia, 482, 484-486 to and Walter M. Fitch, 568-575 americana, 478, 494 Continuous character, 67-78 Certhiidae, 478 Contrasts, independent, 27-47 Chaetognatha, 223-246 Conventions, taxonomic, 174-189 Downloaded from https://academic.oup.com/sysbio/article/45/4/628/1682310 by guest on 28 September 2021 Chamaea, 488 Cooper, Alan C, see Steel, Mike A., — Characium Corrected parsimony, minimum evolution, and Had- hindakii, 324 amard conjugations, David Penny, Michael D. perforatum, 324, 325 Hendy, Peter J. Lockhart, and Michael A. Steel, Character, 596-606 continuous, 67-78 Correlated evolution, 27-47 mapping, 473-495 Corti, Marco, see Rohlf, F. James, — Chauna, 419 Corvidae, 434, 475, 478, 486, 487 Chelchelynechen, 423 Corvus, 480-482 Cheloniellon, 190, 194, 206, 221, 222 ossifragus, 478, 492, 494 Chelychelynechen, 420-426, 433, 447 Coscoroba, 415, 420-426, 428-430, 432, 433, 447 quassus, 417, 448, 450 coscoroba, 416, 421, 445, 448, 449 Chewing lice, 151-167 Cosperiation, 151-167 Chiropotes satanas, 73 Crandall, Keith A., and J. F. Fitzpatrick, Jr., Crayfish Chlamydomonas, 324 molecular systematics: using a combination of Chloephaga, 445 procedures to estimate phylogeny, 1-26 Chrysobalanaceae, 512 Cratogeomys, 152, 154 Clades, 127-134 castanops, 161 Cladistics, 67-78, 415-450 Cladograms, 115-118 merriami, 156, 158 Clock, molecular, 127-134, 151-167 Crayfish molecular systematics: using a combination Clypeaster, 313, 315 of procedures to estimate phylogeny, Keith A. Crandall and J. F. Fitzpatrick, Jr., 1-26 rosaceus, 310, 312, 315 Criniger, 481, 484, 493 Cnemiornis, 415, 420, 423, 425, 427, 433, 440, 442, 448, bres, 478, 492, 494 449 calcitrans, 417 Critchlow, Douglas E., Dennis K. Pearl, and Chunlin gracilis, 417 Qian, The triples distance for rooted bifurcating Cnemiornithidae, 449 phylogenetic trees, 323-334 Code, 67-78 Critesion, 531 Coefficients, tree imbalance, 99-110 bogdanii, 526 Coevolution, 48-66 brevisubulatum, 526 Colless, Donald H., A further note on symmetry of californicum, 526 taxonomic trees, 385-390 violoaceaum, 526 Colobus Crithopsis delileana, 526, 531 guerza, 73 Crocodilians, 393-414 polykomos, 73 Crocodylidae, 411 Coloration, nuptial, 261-277 Crocodylus, 393, 394, 400-404, 407, 408, 411 Combined analysis, 393-414 acutus, 396, 399, 405 Combining data with different distributions of cataphractus, 396, 404 among-site rate variation, Jack Sullivan, 375-380 intermedius, 396 Common principal components, 135-150 johnsoni, 396 Comparative mindorensis, 396 analysis, 415-450 moretetii, 396 biology, 261-277 niloticus, 396, 404 method, 27-47 novaeguineae, 396 Comparison, tree, 151-167 palustris, 396, 404 Component analysis, 151-167 porosus, 396 Computer simulation, 27-47 rhombifer, 396, 399 Confidence, 48-66, 127-134 siamensis, 396 Confidence intervals for the divergence time of two Crown clades, 559-568 clades, Mike A. Steel, Alan C. Cooper, and David Cryptobranchus alleganiensis, 14 Penny, 127-134 Culaea, 263, 266, 270 Congruence, inconstans, 261, 262, 268, 271, 272 1996 631

Cutler, Edward B., The Sipuncula: their systematics, ing hypotheses of correlated evolution using phy- biology, and evolution (rev.), 254-255 logenetically independent contrasts: sensitivity to Cyanistes, 474 deviations from Brownian motion, 27-47 Cygnus, 415, 422, 424-430, 433, 434, 447 Dipterocarpaceae, 512 atratus, 416, 421, 423, 432, 444, 445, 448-450 Disparity, 308-322 bewicki, 417 Dispersal, bewickii, 423, 429, 448 bat, 496-515 buccinator, 417, 429, 442, 443, 445, 448 rodent, 496-515 columbianus, 417, 423, 429, 444, 448 Distributions, probability, 99-110

cygnus, 417, 423, 429, 448 Divergence times, 127-134 Downloaded from https://academic.oup.com/sysbio/article/45/4/628/1682310 by guest on 28 September 2021 jankowskii, 417 Diversification, 168-173 melanocoryphus, 416, 421, 423, 429, 432, 448-450 DNA, olor, 416, 421, 429, 432, 440, 448, 449 hybridization, 473-495, 586-595 sumnerensis, 420, 432 mitochondrial, 1-26, 151-167, 451-472 Cynipidae, 251 phylogeny, 335-343 Cytochrome b sequence, 335-343 ribosomal, 223-246, 451-472 sequences, 151-167 DNA-DNA hybridization data, 586-595 Darwin principle, 79-91 Draconematidae, 233, 234 Dasyleptus, 194, 197, 201, 207, 220-222 Dries, Laurie A., review by, 609 Dasypyrum villosum, 526, 531 Drosophila melanogaster, 3, 224, 614 Dasyuridae, 554, 555 Dumetella, 480, 483, 484, 493 Dasyurus, 555 carolinensis, 478, 492, 494 maculatus, 554 Dunaliella parva, 324 Data, combination, 496-515 combining, 375-380 Echiniscoides, 194, 207, 221, 222 DNA-DNA hybridization, 586-595 Echiniscus, 194, 198, 221, 222 from extant taxa, 259-260 Echinoderes, 194, 221, 222 incongruence, 393-414 Echinoidea, 308-322 landmark, 344-362 Echinus, 315 longitudinal, 135-150 esculentus, 312 molecular, 496-515, 524-545 Echymipera, 555 morphological, 496-515 Ecology, 451-472 Data set incongruence and the phylogeny of crocodil- Ediacara fauna, 190-222 ians, Steven Poe, 393-414 Editorial comment: Systematic Biology and the World Definition, phylogenetic, 174-189 Wide Web, David C. Cannatella, 125-126 Dendraster, 313, 315 Edwards, A. W. F., The origin and early development excentricus, 310, 312 of the method of minimum evolution for the re- Dendrocolaptidae, 478 construction of phylogenetic trees, 79-91 Dendrocygna, 418, 420, 423, 427, 447-449 Eira, 179 Desmognathinae, 451-472 Eleutherodactylus coqui, 283 Desmognathus, 453 Emerson, Sharon B., Phylogenies and physiological aeneus, 451, 452, 454, 456, 457, 460, 461, 463, 464, processes—the evolution of sexual dimorphism in 466, 467, 472 Southeast Asian frogs, 278-289 apalachicolae, 454, 456-458, 460, 461 Encope, 313, 315 auriculatus, 452, 454, 456-458, 461 michelini, 312 brimkyorum, 452, 454, 456-458, 460, 461, 467 Enterobius, 57 conanti, 462 Epsilonematidae, 233 fuscus, 452, 454, 456-462, 472 Equidae, 187 imitator, 454, 456, 457 Equus, 187 marmoratus, 463, 464, 467, 468 Eremophila, 486 monticola, 452, 454, 456-459, 461, 467, 472 Eremopyrum bonaepartis, 526, 531 ochrophaeus, 452, 454, 456-461, 467, 472 Erythrocebus patas, 73 phoca, 452 Estimation, likelihood, 67-78 quadramaculatus, 452, 454, 456-464, 467, 472 Eubacteria, 568-575 santeetlah, 454, 456-458, 46CM62 Eucidaris, 315 zvelteri, 454, 456, 457, 459, 461, 467 tribuloides, 310, 312 wrighti, 451, 452, 454-458, 460, 463, 464, 466, 467, Eukaryote, 568-575 472 Euroscaptor, 345 Developmental evolution, 308-322 Eurycea wilderae, 453, 454, 458 DGGE, 335-343 Eurylaimidae, 478 Diadema setosum, 310 Eurypelma, 236-246 Diaz-Uriarte, Ramon, and Theodore Garland, Jr., Test- californica, 225 632 SYSTEMATIC BIOLOGY VOL. 45

Evolution, Gavialis, 393-395, 398-400, 402-407, 409-411, 414 correlated, 27-47 gangeticus, 396 developmental, 308-322 Geese, 415-450 life history, 308-322 General inconsistency conditions for maximum par- minimum, 79-91, 596-606 simony: effects of branch lengths and increasing nuptual coloration, 261-277 numbers of taxa, Junhyong Kim, 363-374 parallel, 308-322 Geochen, 415, 418, 421-423, 426, 429, 447 protein, 568-575 rhuax, 417, 423^25, 433, 448, 449 rates, 151-167 Geometric morphometrics, 344-362

salamander, A51-A72 Geomidae, 55 Downloaded from https://academic.oup.com/sysbio/article/45/4/628/1682310 by guest on 28 September 2021 sexual dimorphism, 278-289 Geomydoecus, 151-167 titmouse, A73-495 actuosi, 56, 154, 155, 159 women in, 613-617 barabare, 165 Explicitness, stability, and universality in the phylo- chapini, 56, 157, 165 genetic definition and usage of taxon names: a cherriei, 56, 165 case study of the phylogenetic taxonomy of the costaricensis, 56, 165 Carnivora (Mammalia), Harold N. Bryant, 174- ewingi, 56, 154, 165 189 expansus, 161 nadleri, 156, 165 Facivermis, 194, 207, 211, 221, 222 panamensis, 56 Faith, Daniel P., and J. W. H. Trueman, When the to- perotensis, 156-158, 161 pology-dependent permutation test (T-PTP) for setzeri, 56 monophyly returns significant support for mono- texanus, 154, 161 phyly, should that be equated with (a) rejecting a thomomyus, 56, 156, 158, 163 null hypothesis of nonmonophyly, (b) rejecting a trichopi, 156, 157, 165 null hypothesis of "no structure," (c) failing to Geomys, 151-167 falsify a hypothesis of monophyly, or (d) none of bursarius, 56, 57 the above?, 580-586 Gerridae, 135-150 Faith, Daniel P., see Trueman, John W. H., and — Gill, Frank B., see Sheldon, Frederick H., and — Fallicambarus, 15 Glycine max, 324, 325 Fauna, Ediacara, 190-222 Glyphorhynchus, 479, 482, 484, 493 Felidae, 184 spirurus, 478, 492, 494 Felis catus, 182 Glyptocidaris, 315 Felsenstein, Joseph, see Swofford, David L., — crenularis, 312 Felsenstein zone, 516-523 Goniopholis, 396, 397 Female preference, 290-307 Gorilla gorilla, 72, 73, 75 Finite mixture analysis, 67-78 Gramineae, 524-545 Finite mixture coding: a new approach to coding con- Graybeal, Anna, see Messenger, Sharon, — tinuous characters, David S. Strait, Marc A. Mo- Growth, 135-150 niz, and Peggy T. Strait, 67-78 Gruner, H.-E. (ed.), Lehrbuch der Speziellen Zoologie Finite sequence length, 516-523 begriindet von A. Kaestner, 4. Auflage Bd. 1: Wir- Fishes, stickleback, 261-277 bellose Tiere. 4. Teil: Arthropoda (ohne Insecta) Fitch, Walter M., see Miyamoto, Michael M., and — (rev.), 119-120 Fitzpatrick, J. F, Jr., see Crandall, Keith A., and — Guerra, Rudy, and Terence P. Speed, Statistical issues Flury, Bernard D., see Klingenberg, Christian Peter, — arising in the analysis of DNA-DNA hybridiza- Fossils, 415^50 tion data, 586-595 Friedmannia israelensis, 324, 325 Gulo, 179 Fringillidae, 434 Frog, 278-289 Hadamard conjugations, 596-606 Haemonchus, 236-246 Galictis, 179 concortus, 225 Gallotia Halanych, Kenneth M., Testing hypotheses of chaeto- atlantica, 337, 343 gnath origins: long branches revealed in 18S ri- galloti, 335-343 bosomal DNA, 223-246 stehlini, 337 Hallucigenia, 192, 194, 208, 212, 218, 221, 222 Gallus gallus, 95 Heard, Stephen B., and Arne 0. Mooers, Imperfect in- Garland, Theodore, Jr., see Diaz-Uriarte, Ramon, formation and the balance of cladograms and and — phenograms, 115-118 Gasterosteidae, 261-277 Heliocidaris, 313 Gasterosteus, 263, 265-267 erythrogramma, 310, 312, 315 aculeatus, 261, 262, 268-271 Hendy, Michael D., see Penny, David, — wheatlandi, 268, 270-272, 274 Henrardia, 532, 535 Gavialidae, 411 persica, 526, 531 1996 633

Heomys, 565 the evolution of male and female nuptial colora- Herdmandia momus, 232 tion in the stickleback fishes (Gasterosteidae), Herpestidae, 184 Deborah A. McLennan, 261-277 Heterandria, 50, 58 Introgression, lineage, 335-343 Heteranthelium piliferum, 526 Heterogeneity, phylogenetic, 92-98 Jacaretinga litirostris, 412 Hillis, David M., Craig Moritz, and Barbara K. Mable Janovy, John, Jr., On becoming a biologist (rev.), 609 (eds.), Molecular systematics (rev.), 607-609 Jukes-Cantor model, 516-523 Hillis, David M., see Huelsenbeck, John P., — Hirundinidae, 474, 478 Kellogg, Elizabeth A., see Mason-Gamer, Roberta J., Downloaded from https://academic.oup.com/sysbio/article/45/4/628/1682310 by guest on 28 September 2021 Hirundo, 481, 484, 493 and — rustica, 478, 492, 494 Kerygmachela, 194, 205, 207, 212, 220-222 Historical Kim, Junhyong, General inconsistency conditions for associations, 48-66 maximum parsimony: effects of branch lengths ecology, 473-495 and increasing numbers of taxa, 363-374 hypotheses, 335-343 Klingenberg, Christian Peter, Beat E. Neuenschwan- Hobbseus, 15 der, and Bernard D. Flury, Ontogeny and individ- Holopneustes, 313 ual variation: analysis of patterned covariance purpurescens, 310, 312 matrices with common principal. components, Homo, 562 135-150 sapiens, 72, 73, 75 Krigia, 509 Hordeum bulbosum, 526, 531 Hormone, 278-289 Label-invariant models, 323-334 Huelsenbeck, John P., and J. J. Bull, A likelihood ratio Lacertidae, 335-343 test to detect conflicting phylogenetic signal, 92- Laggania, 220 98 Lagothrix lagothricha, 73 Huelsenbeck, John P., David M. Hillis, and Rasmus Landmark data, 344-362 Nielsen, A likelihood-ratio test of monophyly, Large phylogenies, 363-374 546-558 Larson, Allan, see Titus, Tom A., and — Hyaenidae, 184 Larva, 308-322 Hybridization, DNA, 473-495 Latimeria chalumnae, 191 Hylarana, 281-283 Leanchoilia, 194, 206, 218, 219, 221, 222 Hylobates Leguminosae, 496-515 agilis, 73 concolor, 73 Lehrbuch der Speziellen Zoologie begriindet von A. hoolock, 73 Kaestner, 4. Auflage Bd. 1: Wirbellose Tiere. 4. Teil: Arthropoda (ohne Insecta), H.-E. Gruner klossi, 73 (ed.) (rev.), 119-120 lar, 72, 73, 75 Leontopithecus rosalia, 73 moloch, 73 Leporidae, 562, 563 muelleri, 73 Lepus, 563 Hymenolobium, 497, 510, 511 Leurognathus, 453, 460, 462, 463 flauum, 498, 500 marmoratus, 452, 454, 456-461, 472 nitidum, 498, 500 Licania, 512 Hypoptychidae, 262 Life history, 451^72 Hypotheses, historical, 335-343 Hypothesis testing, 27-47, 323-334 evolution, 308-322 Ligictaluridis, 61 Likelihood, Ibaliidae, 251 estimation, 67-78 Icteridae, 478 maximum, 92-98, 546-558 Ictonyx, 179 ratio test, 92-98, 546-558 Iguana, 564 Likelihood ratio test to detect conflicting phyloge- Imperfect information and the balance of cladograms netic signal, a, John P. Huelsenbeck and J. J. Bull, and phenograms, Stephen B. Heard and Arne 0. 92-98 Mooers, 115-118 Likelihood-ratio test of monophyly, a, John P. Huelsen- Incongruence, beck, David M. Hillis, and Rasmus Nielsen, 546- data, 393-414 558 length difference test, 524—545 Limicolaria, 236-246 Inconsistency, 363-374 kambeul, 225 Independent contrasts, 27-47 Limnonectes, 279 Indostomidae, 262 Limnoporus canaliculatus, 135, 136, 140, 141 Inga, 512 Lineage introgression, 335-343 Insectivore, 344-362 Liopteridae, 251 Integrating phylogenetic and experimental analyses: Lithobius, 194, 201, 207, 221, 222 634 SYSTEMATIC BIOLOGY VOL. 45

Livezey, Bradley C, A phylogenetic analysis of geese niger, 396, 412 and swans (Anseriformes: Anserinae), including Meliaceae, 512 selected fossil species, 415-450 Melibe, 198 Lobopod,190-222 Mellivora, 179 Lockhart, Peter ]., see Penny, David, — Melogale, 183, 186 Long branches, 223-246, 363-374 Meng, Jin, see Wyss, Andre R., and — Longitudinal data, 135-150 Messenger, Sharon, Anna Graybeal, and Kendra Min- Lophophanes, 474, 487 go, Report on the conference "women in evolu- Losos, Jonathan B., Phylogenies and comparative bi- tion: a gathering of scientific perspectives," 613- ology, stage II: testing causal hypotheses derived 617 Downloaded from https://academic.oup.com/sysbio/article/45/4/628/1682310 by guest on 28 September 2021 from phylogenies with data from extant taxa, Metaspriggina, 211 259-260 Methods, Louisella, 209 comparative, 27-47 Loy, Anna, see Rohlf, F. James, — phylogenetic, 92-98, 546-558 Luolishania, 194, 208, 221, 222 Metrics, tree comparison, 323-334 Lyncodon, 179 Miacidae, 175, 176 Lytechinus, 315 Mialsemia, 194, 195, 198, 199, 204, 218, 220-222 variegatus, 310, 312 Microdictyon, 194, 208, 212, 218, 221, 222 Milnesium, 194, 217, 221, 222 Mable, Barbara K., see Hillis, David M., — Mingo, Kendra, see Messenger, Sharon, — Macaca Minimum evolution, 79-91, 596-606 arctoides, 73 Miopithecus talapoin, 73 assamensis, 73 Mitochondrial DNA, 1-26, 151-167, 451^72 brunescens, 73 Miyamoto, Michael M., and Walter M. Fitch, Con- fascicularis, 73 straints on protein evolution and the age of the hecki, 73 eubacteria/eukaryote split, 568-575 mulatta, 73 Model, nemestrina, 73 Jukes-Cantor, 516-523 nigra, 73 label-invariant, 323-334 ochreata, 73 Yule, 168-173 thibetana, 73 Mogera, 344, 353, 356 tonkeana, 73 latouchei, 345, 346, 354, 357-359 Macrobiotus, 194, 217, 221, 222 Molecular Macroevolutionary processes, 99-110 clock, 127-134, 151-167 Malhotra, Anita, see Thorpe, Roger S., — phylogeny, 335-343, 451^72, 496-515 Mammalia, 174-189, 344-362 systematics, 1-26 Mandrillus sphinx, 73 Molecular and morphological data provide phyloge- Mapping, character, 473-495 netic resolution at different hierarchical levels in Marrella, 194, 206, 221, 222 Andira, R. Toby Pennington, 496-515 Martes, 179 Molecular phylogenetics of desmognathine salaman- Marywadea, 194, 195, 199, 207, 211, 218, 221, 222 ders (Caudata: Plethodontidae): a reevaluation of Mason-Gamer, Roberta ]., and Elizabeth A. Kellogg, evolution in ecology, life history, and morphology, Testing for phylogenetic conflict among molecu- Tom A. Titus and Allan Larson, 451-472 lar data sets in the tribe Triticeae (Gramineae), Molecular systematics, David M. Hillis, Craig Moritz, 524-545 and Barbara K. Mable (eds.) (rev.), 607-609 Mate choice, 290-307 Moniliform, 236-246 Matrix correspondence tests on the DNA phylogeny Moniliformis moniliformis, 225 of the Tenerife lacertid elucidate both historical Moniz, Marc A., see Strait, David S., — causes and morphological adaptation, Roger S. Monophyly, 546-558, 575-579, 580-586 Thorpe, Heather Black, and Anita Malhotra, 335- Monte Carlo sampling, 516-523 343 Mooers, Arne 0., see Heard, Stephen B., and — Matrix representation of trees, redundancy, and Morganucodon, 564 weighting, Fredrik Ronquist, 247-253 Moritz, Craig, see Hillis, David M., — Maximum Morphometric analysis of Old World Talpidae (Mam- likelihood, 92-98, 546-558 malia, Insectivora) using partial-warp scores, F. parsimony, 363-374 James Rohlf, Anna Loy, and Marco Corti, 344-362 McLennan, Deborah A., Integrating phylogenetic and Morphometrics, experimental analyses: the evolution of male and geometric, 344-362 female nuptial coloration in the stickleback fishes multivariate, 135-150 (Gasterosteidae), 261-277 Multivariate morphometrics, 135-150 Megdlapteryx, 132 Mus, 185, 561-564 Meiopriapulus fijiensis, 196 musculus, 95 Melanosuchus, 394, 403, 404, 406, 408, 411 Muscicapidae, 477, 478 1996 635

Mustek, 179, 185, 186 bngidigitus, 2, 4 Mustelidae, 176, 179, 181-186 luteus, 4, 8 macrus, 2, 4 n-taxon trees, 516-523 medius, 4 Names, taxon, 174-189 meefa', 4 Nandinia, 176-178 menae, 4 Naraoia, 194, 204, 206, 211, 221, 222 mirus, 4, 7 Nasalis larvatus, 73 wanfl, 4 Natrix natrix, 341 neglectus, 4, 13 Nectariniidae, 478 ozarkae, 4, 14 Downloaded from https://academic.oup.com/sysbio/article/45/4/628/1682310 by guest on 28 September 2021 Nectocaris, 192, 194, 207, 211, 218, 220-222 palmeri, 5, 7 Neighbor joining, 516-523 peruncus, 4 Nematoda, 223-246 placidus, 4 Nematodirus, 236-246 punctimanus, 4, 13 battus, 225 putnami, 4 Neobelliera bullata, 140 quadruncus, 4 Neopilina, 196 rusticus, 2, 4, 7 Neostygardus, 194, 221, 222 saxatilis, 2, 4, 13 Neuenschwander, Beat E., see Klingenberg, Christian spinosus, 4 Peter, — transfuga, 4 Nielsen, Rasmus, see Huelsenbeck, John P., — validus, 5 Nomenclatural stability, 174-189 virilis, 5, 13 Notophthalmus viridescens, 454, 456, 458 wililamsi, 4 Nuptial coloration, 261-277 Origin and early development of the method of min- Nymphon, 194, 221, 222 imum evolution for the reconstruction of phylo- genetic trees, the, A. W. F. Edwards, 79-91 Orthogeomys, 151-167 Ochotona, 563 cavator, 56, 57, 165 Ochotonidae, 562 cherriei, 56, 57 Ockham's razor, 79-91 grandis, 165 Odobenidae, 184 heterodus, 56, 57 Oesophagostum, 57 hispidus, 56, 57, 157, 165 Olenoides, 194, 221, 222 underwoodi, 56, 57, 165 Olmstead, Richard G, review by, 607-609 Osteolaemus, 394, 399, 402^05, 407, 411 Olor, 417, 420, 421, 426 tetraspis, 396 bewickii, 450 Otariidae, 184 buccinator, 449 Oxytropis, 171 columbianus, 449 cygnus, 450 Onega, 207, 211 Page, Roderic D. M., Temporal congruence revisited: Ontogeny and individual variation: analysis of pat- comparison of mitochondrial DNA sequence di- terned covariance matrices with common princi- vergence in cospeciating pocket gophers and their pal components, Christian Peter Klingenberg, chewing lice, 151-167 Beat E. Neuenschwander, and Bernard D. Flury, Palaeoisopus, 194, 221, 222 135-150 Paleosuchus, 394, 402-404, 406, 411 Onychodictyon, 194, 208, 220-222 palpebrosus, 396 Onychomys, 375 trigonatus, 396 Opabinia, 192,194-196, 206, 211, 212, 217-219, 221, 222 Pan Ophiopholis aculeata, 309, 312, 314, 315 paniscus, 73 Opisthorchis, 236-246 troglodytes, 72, 73, 75 viverrini, 225 Panurus, 488 Orconectes, 1-26 Papio acares, 4 anubis, 73 australis, 5, 14, 15 cynocephalus, 73 barrenensis, 4 hamadryas, 73 causeyi, 5 Pappogeomys, 151-167 eupunctus, 5 fcu/ferz, 156, 165 forceps, 4 Paradisaea, 479-482, 493 harrisoni, 4, 7 raggiana, 477, 478, 492, 494 hylas, 4 Paradisaeidae, 478 indianensis, 5 Parallel evolution of nonfeeding larvae in echinoids, kentuckiensis, 5 Gregory A. Wray, 308-322 lancifer, 5 Parascalops, 344, 353 leptogonopodus, 4 n, 345, 346, 352, 354, 356, 359 636 SYSTEMATIC BIOLOGY VOL. 45

Paraspadella, 236-246 Phylogenetic distribution of a female preference, the, gotoi, 225 Alexandra L. Basolo, 290-307 Parental care, 278-289 Phylogenetic hypotheses of the relationships of ar- Paridae, 473-475, 478, 485-488 thropods to Precambrian and Cambrian problem- Parietochloris pseudoalveolaris, 324, 325 atic fossil taxa, Benjamin M. Waggoner, 190-222 Parsimony, 1-26, 79-91, 596-606 Phylogenetics, molecular, 451-472 maximum, 363-374 Phylogenies, large, 363-374 Partial Mantel tests, 335-343 Phylogenies and comparative biology, stage II: testing Parus, 474, 481, 484-488 causal hypotheses derived from phylogenies with atricctpillus, 478, 492, 494 data from extant taxa, Jonathan B. Losos, 259-260 Downloaded from https://academic.oup.com/sysbio/article/45/4/628/1682310 by guest on 28 September 2021 caeruleus, 486 Phylogenies and physiological processes-the evolu- major, 486 tion of sexual dimorphism in Southeast Asian Parvancorina, 194, 199, 204, 211, 217, 221, 222 frogs, Sharon B. Emerson, 278-289 Passeriformes, 473-495 Phylogeny, 27-47, 127-134, 151-167, 168-173, 223- Pearl, Dennis K., see Critchlow, Douglas E., — 246, 261-277, 393-414, 473-495 Pennington, R. Toby, Molecular and morphological molecular, 335-343 data provide phylogenetic resolution at different reconstruction, 1-26 hierarchical levels in Andira, 496-515 Physalaemus, 293 Penny, David, Michael D. Hendy, Peter J. Lockhart, coloradorum, 292 and Michael A. Steel, Corrected parsimony, min- pustulosus, 292 imum evolution, and Hadamard conjugations, Piliocolobus badius, 73 596-606 Pipiscius, 219 Penny, David, see Steel, Mike A., — Pitecia Peridictyon sanctum, 526 monachus, 73 Periparus, 474, 487 pithecia, 73 Peripatus, 194, 198, 201, 208, 221, 222 Placopecten, 236-246 Permutation test, 524-545, 580-586 magellanicus, 225 Peromyscus, 375 Plataleidae, 434 eremicus, 376, 377 Plethodontidae, 451-472 leucopus, 376, 377 Poaceae, 524-545 maniculatus, 376, 377 Pocket gophers, 151-167 Peronella japonica, 310, 312, 319 Poe, Steven, Data set incongruence and the phylogeny Peytoia, 194, 211, 212, 219-222 of crocodilians, 393-414 Phaeognathus, 453, 462, 467 Poecile, 474, 487 hubrichti, 451, 454-458, 460, 464, 466, 472 Poecilia reticulata, 294 Phalanger, 555 Poecilictis, 179 Phenograms, 115-118 Poeciliidae, 293 Philander, 554, 555 Poecilogale, 179 Phocidae, 184 Polioptila, 479, 482, 484-486, 495 Phoronis, 236-246 caerulea, 478, 494 Vancouverensis, 225 Pongo pygmaeus, 72, 73, 75 Phyllacanthus, 309, 315 Praecambridium, 191, 194, 195, 199, 204, 207, 211, 217, imperialis, 310, 312 218, 221, 222 parvispinus, 310, 312, 313 Precambrian, 190-222 Phylloscopus, 484, 485 Preexisting biases, 290-307 collybita, 478, 494 Preference, female, 290-307 Phylogenetic Presbytis analysis, 415—450 aygula, 73 congruence, 524-545 cristata, 73 covariance, 48-66 entellus, 73 definition, 174-189 frontata, 73 distribution, 290-307 hosei, 73 heterogeneity, 92-98 johnii, 73 hypotheses, 190-222 melalophos, 73 methods, 92-98, 546-558 obscura, 73 taxonomy, 174-189, 559-568 pileata, 73 trees, 79-91, 99-110 rubicunda, 73 Phylogenetic analysis of geese and swans (Anserifor- Priapella, 290-307 mes: Anserinae), including selected fossil species, olmecae, 299, 300, 302 a, Bradley C. Livezey, 415-450 Priapulus, 194, 197, 199, 209, 221, 222 Phylogenetic covariance probability: confidence and Principal components, common, 135-150 historical associations, Mark E. Siddall, 48-66 Principle, Darwin, 79-91 1996 637

Probabilistic basis of Jaccard's index of similarity, the, Relative warps, 344-362 Raimundo Real and Juan M. Vargas, 380-385 Remiz, 481, 484-488 Probability distributions, 99-110 pendulinus, 478, 492, 494 Problematica, 190-222 Remizidae, 473, 485 Procambarus, 3 Report of society business for 1996, 618-624 acutus, 5, 7 Report on the conference "women in evolution: a clarkii, 1 gathering of scientific perspectives," Sharon Mes- zonangulus, 1 senger, Anna Graybeal, and Kendra Mingo, 613- Processes, macroevolutionary, 99-110 617

Procobbus verus, 73 Rhizobium, 614 Downloaded from https://academic.oup.com/sysbio/article/45/4/628/1682310 by guest on 28 September 2021 Procyonidae, 176, 181-184 Ribosomal DNA, 451^72 Protein evolution, 568-575 Richter, Stefan, review by, 119-120 Psaltriparus, 484, 495 Rodent dispersal, 496-515 minimus, 478, 494 Rodentia, 559-568 Psammodromus, 337 Rogers, James S., Central moments and probability Psathyrostachys, 531, 532, 535 distributions of three measures of phylogenetic fragilis, 526 tree imbalance, 99-110 juncea, 526 Rohlf, F. James, Anna Loy, and Marco Corti, Morpho- Pseudoroegneria metric analysis of Old World Talpidae (Mamma- libanotica, 526, 539 lia, Insectivora) using partial-warp scores, 344— spicata, 526, 531 362 Pseudovendia, 207, 211 Ronquist, Fredrik, Matrix representation of trees, re- Ptaiochen, 418, 420-427, 433, 447 dundancy, and weighting, 247-253 pau, 417, 443, 448, 450 Pungitius, 261, 263, 266, 270, 272, 274 Saccharomyces cerevisiae, 224, 235 pungitius, 271, 272 Saccoglossus, 236-246 Pycnonotidae, 478 kowalevskii, 225 Pycnonotus barbatus, 475 Sagitta, 192, 232 Pygathrix nemaeus, 73 crassa, 225, 236-246 elegans, 225, 233, 236-246 Qian, Chunlin, see Critchlow, Douglas E., — Saguinus Quiscalus, 480, 482-484 fuscicollis, 73 quiscula, 478, 492, 494 imperator, 73 labiatus, 73 Rallidae, 434 leucopus, 73 Rana, 278-289 midas, 73 blythi, 281, 284-286 mystax, 73 catesbeiana, 284, 285 oediups, 73 finchi, 281, 282 Saimiri sciureus, 73 kasheana, 282 Salamander, 451-472 ibanorum, 285 Salamandridae, 454 m#en, 281, 285, 286 Sampling, kuhli, 285 Monte Carlo, 516-523 limnocharis, 281 taxon, 168-173 palauanensis, 281, 282 Sanctacaris, 194, 204, 206, 221, 222 paramacrodon, 281, 286 Sanderson, Michael J., How many taxa must be sam- Random cladistics, version 3.0, Mark Siddall (rev.), pled to identify the root node of a large clade?, 610-612 168-173 Random trees, 323-334 Sapotaceae, 512 Randomization, 48-66 Sarcophilus, 555 Rate, variation, 375-380 harrisii, 554 Rates of evolution, 151-167 Sceloporus undulatus, 95 Ratio test, likelihood, 92-98 Schistosoma, 236-246 Real, Raimundo, and Juan M. Vargas, The probabilistic haematobium, 225 basis of Jaccard's index of similarity, 380-385 Scypha, 236-246 Reconsideration of songbird phylogeny, with empha- ciliata, 225 sis on the evolution of titmice and their sylvioid Secale, 525, 532, 540 relatives, a, Frederick H. Sheldon and Frank B. cereals, 526 Gill, 473-495 montanum, 526 Reconstruction, phylogeny, 1-26 sylvestre, 526 Redundancy, 247-253 vavilovii, 526 Regulus, 480, 483, 485, 486, 495 Sedis mutabilis, 449 scttrapa, 478, 494 Selection, sexual, 261-277 638 SYSTEMATIC BIOLOGY VOL. 45

Semnoderes, 194, 221, 222 Strimmer, Korbinian, and Arndt von Haeseler, Accu- Separate analysis, 393-414 racy of neighbor joining for n-taxon trees, 516- Sequences, 523 aligned, 127-134 Strongylocentrotus, 236-246, 315 DNA, 151-167 purpuratus, 225, 310, 312 Sexual Sturnidae, 478 dimorphism, 278-289 Sturnus, 480, 483, 484, 493 selection, 261-277 vulgaris, 478, 492, 494 Shape, 111-115 Sullivan, Jack, Combining data with different distri- Sheldon, Frederick H., and Frank B. Gill, A reconsid- butions of among-site rate variation, 375-380 Downloaded from https://academic.oup.com/sysbio/article/45/4/628/1682310 by guest on 28 September 2021 eration of songbird phylogeny, with emphasis on Swans, 415-450 the evolution of titmice and their sylvioid rela- Swofford, David L., Jeffrey L. Thorne, Joseph Felsen- tives, 473-495 stein, and Brian M. Wiegmann, The topology-de- Shorea, 512 pendent permutation test for monophyly does not Siddall, Mark E., Phylogenetic covariance probability: test for monophyly, 575-579 confidence and historical associations, 48-66 Sword, 290-307 Siddall, Mark E., Stratigraphic consistency and the Swordtail, 290-307 shape of things, 111-115 Sylvia, 484-486, 495 Siddall, Mark, Random cladistics, version 3.0 (rev.), atricapilla, 478, 494 610-612 Sylvioidea, 473-495 Sidneyia, 194, 204, 206, 221, 222 Sylviparus, 488 Similarity, 380-385 Symmetry of taxonomic trees, a further note on, Don- Simulation, computer, 27-47 ald H. Colless, 385-390 Sipuncula: their systematics, biology, and evolution Symphalangus syndactylus, 73 (rev.), the, Edward B. Cutler, 254-255 Syngnathidae, 262 Sitta, 481, 484-486 Systematics, molecular, 1-26 carolinensis, 478, 492, 494 Sittidae, 473, 478, 486, 487 T-PTP test, 524-545, 575-579, 580-586 Size, 135-150 Taeniatherum caput-medusae, 526, 531 Skania, 211 Talpa, 344 Skara, 194, 221, 222 caeca, 345, 346, 354, 357, 359 Society business for 1996, report of, 618-624 europaea, 345, 346, 352-354, 356-359 Spadella, 233 occidentalis, 345, 346, 354, 356-359 Spatangus, 315 romana, 345, 346, 352-354, 356-359 purpureus, 310, 312 stankovici, 345, 346, 352-354, 356-359 Speciation, 99-110, 168-173 Talpidae, 344-362 Speed, Terence P., see Guerra, Rudy, and — Tatria, 198 Sphenodon, 401 Taxa must be sampled to identify the root node of a punctatus, 396, 397 large clade?, how many, Michael J. Sanderson, Spline, thin-plate, 344-362 168-173 Spriggina, 194, 195, 197, 199, 207, 211, 218, 221, 222 Taxon borealis, 217 names, 174-189 floundersi, 217 sampling, 168-173 Sprigginidae, 190, 207 Taxonomic Stability, nomenclatural, 174-189 conventions, 174-189 Stachyris, 481, 484, 493 trees, 385-390 poliocephala, 478, 492, 494 usage, 174-189 Statistical issues arising in the analysis of DNA-DNA Taxonomy, phylogenetic, 174-189, 559-568 hybridization data, Rudy Guerra and Terence P. Temnopleurus, 315 Speed, 586-595 hardwickii, 310, 312 Staton, Joseph L., review by, 254-255 Temporal congruence revisited: comparison of mito- Steel, Michael A., see Penny, David, — chondrial DNA sequence divergence in cospeciat- Steel, Mike A., Alan C. Cooper, and David Penny, ing pocket gophers and their chewing lice, Rod- Confidence intervals for the divergence time of eric D. M. Page, 151-167 two clades, 127-134 Tenebrio, 236-246 Stickleback fishes, 261-277 molitor, 224, 225 Stictonetta, 420, 423, 441, 448, 450 Test, Strait, David S., Marc A. Moniz, and Peggy T. Strait, hypothesis, 323-334 Finite mixture coding: a new approach to coding incongruence length difference, 524-545 continuous characters, 67-78 likelihood, 92-98 Strait, Peggy T., see Strait, David S., — likelihood-ratio, 546-558 Stratigraphic consistency and the shape of things, partial Mantel, 335-343 Mark E. Siddall, 111-115 permutation, 524-545, 580-586 1996 639

T-PTP, 524-545 does not test for monophyly, the, David L. Swof- topology-dependent permutation, 575-579, 580-586 ford, Jeffrey L. Thorne, Joseph Felsenstein, and Wilcoxon signed ranks, 524-545 Brian M. Wiegmann, 575-579 winning-sites, 223-246 Travisiopsis, 198 Testing for phylogenetic conflict among molecular Trees, 247-253 data sets in the tribe Triticeae (Gramineae), Rob- comparison, 151-167 erta J. Mason-Gamer and Elizabeth A. Kellogg, comparison metrics, 323-334 524-545 imbalance coefficients, 99-110 Testing hypotheses of chaetognath origins: long n-taxon, 516-523 branches revealed in 18S ribosomal DNA, Ken- phylogenetic, 79-91, 99-110 Downloaded from https://academic.oup.com/sysbio/article/45/4/628/1682310 by guest on 28 September 2021 neth M. Halanych, 223-246 random, 323-334 Testing hypotheses of correlated evolution using phy- taxonomic, 385-390 logenetically independent contrasts: sensitivity to tropical, 496-515 deviations from Brownian motion, Ramon Diaz- Tribosphenomys, 559, 560, 563-565 Uriarte and Theodore Garland, Jr., 27-47 Trichodectidae, 55 Tethys, 198 Tricosurus, 555 Thalassornia, 449 Triples distance for rooted bifurcating phylogenetic Thalassornis, 418, 420, 423, 427, 448, 449 trees, the, Douglas E. Critchlow, Dennis K. Pearl, Thambetochen, 415, 418, 420-426, 433, 440, 442, 447 and Chunlin Qian, 323-334 chauliodous, 417, 423, 427, 443, 448, 450 Tripneustes, 315 xanion, 417, 448, 450 gratilla, 312 Theropithecus gelada, 73 Triticeae, 524-545 Thin-plate spline, 344-362 Triticum monococcum, 526, 531, 532, 535, 538, 541, 543 Thinopyrum, 532, 538 Tritonia, 198 bessarabicum, 526, 531, 540 Tropical trees, 496-515 elongatum, 526, 531, 535, 540 Trueman, J. W. H., see Faith, Daniel P., and — scirpeum, 526 Trueman, John W. H., and Daniel P. Faith, review by, Thomomydoecus, 151-167 610-612 minor, 56 Turdus, 480, 481, 483, 484, 493 wardi, 56 migratorius, 478, 492, 494 Thomomys, 151-167 bottae, 56, 57, 165, 166 Ursidae, 177, 181-184 minor, 165 talpoides, 56, 57, 156, 163, 165 Vargas, Juan M., see Real, Raimundo, and — townsendi, 166 Variation, among-site rate, 375-380 Thome, Jeffrey L., see Swofford, David L., — Vendia, 191, 194, 195, 199, 204, 211, 217, 221, 222 Thorpe, Roger S., Heather Black, and Anita Malhotra, Vendian, 190-222 Matrix correspondence tests on the DNA phylog- Vendichnus vendicus, 210 eny of the Tenerife lacertid elucidate both histor- Vendomia, 207, 211 ical causes and morphological adaptation, 335- Vireo, 480, 481, 483, 493 343 olivaceus, 478, 492, 494 Thryothorus, 479, 482, 484-486, 495 Vireonidae, 478 ludovicianus, 478, 494 Viverravidae, 175, 176 Thylacinus, 546-558 Viverridae, 184 cynocephalus, 554 von Haeseler, Arndt, see Strimmer, Korbinian, and — Times, divergence, 127-134 Vormela, 179 Titus, Tom A., and Allan Larson, Molecular phyloge- netics of desmognathine salamanders (Caudata: Waggoner, Benjamin M., Phylogenetic hypotheses of Plethodontidae): a reevaluation of evolution in the relationships of arthropods to Precambrian ecology, life history, and morphology, 451-472 and Cambrian problematic fossil taxa, 190-222 Tomistoma, 393-395, 398-400, 402-405, 407-411, 414 Warps, relative, 344-362 schlegelii, 396 Waterfowl, 415-450 Topology-dependent permutation test, 575-579, 580- Weighting, 247-253 586 Wiegmann, Brian M., see Swofford, David L., — Topology-dependent permutation test (T-PTP) for Wilcoxon signed ranks test, 524-545 monophyly returns significant support for mono- Winning-sites test, 223-246 phyly, should that be equated with (a) rejecting a Women in evolution, 613-617 null hypothesis of nonmonophyly, (b) rejecting a Wray, Gregory A., Parallel evolution of nonfeeding lar- null hypothesis of "no structure," (c) failing to vae in echinoids, 308-322 falsify a hypothesis of monophyly, or (d) none of Wyss, Andre R., and Jin Meng, Application of phy- the above?, when the, Daniel P. Faith and J. W. H. logenetic taxonomy to poorly resolved crown Trueman, 580-586 clades: a stem-modified node-based definition of Topology-dependent permutation test for monophyly Rodentia, 559-568 640 SYSTEMATIC BIOLOGY VOL. 45

Xenopus, 455 montezumae, 294 Xenusion, 191, 194, 196, 208, 221, 222 multilineatus, 293, 294 Xiphophorus, 50, 58, 290-307 nezahualcoyotl, 294 alvarezi, 294 nigrensis, 293, 294 andersi, 294, 296, 298 pygmaeus, 294-296, 298 birchmanni, 293-296, 298 signum, 294 clemenciae, 293-295 variatus, 294, 297-299 continens, 293, 294, 296-298 xiphidium, 294, 296, 298 cortezi, 294

couchianus, 294, 297 Downloaded from https://academic.oup.com/sysbio/article/45/4/628/1682310 by guest on 28 September 2021 evelynae, 294 194, 204, 206, 219, 221, 222 gordoni, 294, 297 Yule model, 168-173 te/fen, 293-295, 302 maculatus, 293, 294, 297-299 Zone, Felsenstein, 516-523 malinche, 294 Zygoegeomys, 152 meyeri, 294 Zygogeotnys, 154 f, 294, 297 trichopus, 156, 157, 165