Demospongiae: Dictyoceratida: Thorectidae) from Korea
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National Monitoring Program for Biodiversity and Non-Indigenous Species in Egypt
UNITED NATIONS ENVIRONMENT PROGRAM MEDITERRANEAN ACTION PLAN REGIONAL ACTIVITY CENTRE FOR SPECIALLY PROTECTED AREAS National monitoring program for biodiversity and non-indigenous species in Egypt PROF. MOUSTAFA M. FOUDA April 2017 1 Study required and financed by: Regional Activity Centre for Specially Protected Areas Boulevard du Leader Yasser Arafat BP 337 1080 Tunis Cedex – Tunisie Responsible of the study: Mehdi Aissi, EcApMEDII Programme officer In charge of the study: Prof. Moustafa M. Fouda Mr. Mohamed Said Abdelwarith Mr. Mahmoud Fawzy Kamel Ministry of Environment, Egyptian Environmental Affairs Agency (EEAA) With the participation of: Name, qualification and original institution of all the participants in the study (field mission or participation of national institutions) 2 TABLE OF CONTENTS page Acknowledgements 4 Preamble 5 Chapter 1: Introduction 9 Chapter 2: Institutional and regulatory aspects 40 Chapter 3: Scientific Aspects 49 Chapter 4: Development of monitoring program 59 Chapter 5: Existing Monitoring Program in Egypt 91 1. Monitoring program for habitat mapping 103 2. Marine MAMMALS monitoring program 109 3. Marine Turtles Monitoring Program 115 4. Monitoring Program for Seabirds 118 5. Non-Indigenous Species Monitoring Program 123 Chapter 6: Implementation / Operational Plan 131 Selected References 133 Annexes 143 3 AKNOWLEGEMENTS We would like to thank RAC/ SPA and EU for providing financial and technical assistances to prepare this monitoring programme. The preparation of this programme was the result of several contacts and interviews with many stakeholders from Government, research institutions, NGOs and fishermen. The author would like to express thanks to all for their support. In addition; we would like to acknowledge all participants who attended the workshop and represented the following institutions: 1. -
Taxonomy and Diversity of the Sponge Fauna from Walters Shoal, a Shallow Seamount in the Western Indian Ocean Region
Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region By Robyn Pauline Payne A thesis submitted in partial fulfilment of the requirements for the degree of Magister Scientiae in the Department of Biodiversity and Conservation Biology, University of the Western Cape. Supervisors: Dr Toufiek Samaai Prof. Mark J. Gibbons Dr Wayne K. Florence The financial assistance of the National Research Foundation (NRF) towards this research is hereby acknowledged. Opinions expressed and conclusions arrived at, are those of the author and are not necessarily to be attributed to the NRF. December 2015 Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region Robyn Pauline Payne Keywords Indian Ocean Seamount Walters Shoal Sponges Taxonomy Systematics Diversity Biogeography ii Abstract Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region R. P. Payne MSc Thesis, Department of Biodiversity and Conservation Biology, University of the Western Cape. Seamounts are poorly understood ubiquitous undersea features, with less than 4% sampled for scientific purposes globally. Consequently, the fauna associated with seamounts in the Indian Ocean remains largely unknown, with less than 300 species recorded. One such feature within this region is Walters Shoal, a shallow seamount located on the South Madagascar Ridge, which is situated approximately 400 nautical miles south of Madagascar and 600 nautical miles east of South Africa. Even though it penetrates the euphotic zone (summit is 15 m below the sea surface) and is protected by the Southern Indian Ocean Deep- Sea Fishers Association, there is a paucity of biodiversity and oceanographic data. -
A Soft Spot for Chemistry–Current Taxonomic and Evolutionary Implications of Sponge Secondary Metabolite Distribution
marine drugs Review A Soft Spot for Chemistry–Current Taxonomic and Evolutionary Implications of Sponge Secondary Metabolite Distribution Adrian Galitz 1 , Yoichi Nakao 2 , Peter J. Schupp 3,4 , Gert Wörheide 1,5,6 and Dirk Erpenbeck 1,5,* 1 Department of Earth and Environmental Sciences, Palaeontology & Geobiology, Ludwig-Maximilians-Universität München, 80333 Munich, Germany; [email protected] (A.G.); [email protected] (G.W.) 2 Graduate School of Advanced Science and Engineering, Waseda University, Shinjuku-ku, Tokyo 169-8555, Japan; [email protected] 3 Institute for Chemistry and Biology of the Marine Environment (ICBM), Carl-von-Ossietzky University Oldenburg, 26111 Wilhelmshaven, Germany; [email protected] 4 Helmholtz Institute for Functional Marine Biodiversity, University of Oldenburg (HIFMB), 26129 Oldenburg, Germany 5 GeoBio-Center, Ludwig-Maximilians-Universität München, 80333 Munich, Germany 6 SNSB-Bavarian State Collection of Palaeontology and Geology, 80333 Munich, Germany * Correspondence: [email protected] Abstract: Marine sponges are the most prolific marine sources for discovery of novel bioactive compounds. Sponge secondary metabolites are sought-after for their potential in pharmaceutical applications, and in the past, they were also used as taxonomic markers alongside the difficult and homoplasy-prone sponge morphology for species delineation (chemotaxonomy). The understanding Citation: Galitz, A.; Nakao, Y.; of phylogenetic distribution and distinctiveness of metabolites to sponge lineages is pivotal to reveal Schupp, P.J.; Wörheide, G.; pathways and evolution of compound production in sponges. This benefits the discovery rate and Erpenbeck, D. A Soft Spot for yield of bioprospecting for novel marine natural products by identifying lineages with high potential Chemistry–Current Taxonomic and Evolutionary Implications of Sponge of being new sources of valuable sponge compounds. -
Supplementary Materials: Patterns of Sponge Biodiversity in the Pilbara, Northwestern Australia
Diversity 2016, 8, 21; doi:10.3390/d8040021 S1 of S3 9 Supplementary Materials: Patterns of Sponge Biodiversity in the Pilbara, Northwestern Australia Jane Fromont, Muhammad Azmi Abdul Wahab, Oliver Gomez, Merrick Ekins, Monique Grol and John Norman Ashby Hooper 1. Materials and Methods 1.1. Collation of Sponge Occurrence Data Data of sponge occurrences were collated from databases of the Western Australian Museum (WAM) and Atlas of Living Australia (ALA) [1]. Pilbara sponge data on ALA had been captured in a northern Australian sponge report [2], but with the WAM data, provides a far more comprehensive dataset, in both geographic and taxonomic composition of sponges. Quality control procedures were undertaken to remove obvious duplicate records and those with insufficient or ambiguous species data. Due to differing naming conventions of OTUs by institutions contributing to the two databases and the lack of resources for physical comparison of all OTU specimens, a maximum error of ± 13.5% total species counts was determined for the dataset, to account for potentially unique (differently named OTUs are unique) or overlapping OTUs (differently named OTUs are the same) (157 potential instances identified out of 1164 total OTUs). The amalgamation of these two databases produced a complete occurrence dataset (presence/absence) of all currently described sponge species and OTUs from the region (see Table S1). The dataset follows the new taxonomic classification proposed by [3] and implemented by [4]. The latter source was used to confirm present validities and taxon authorities for known species names. The dataset consists of records identified as (1) described (Linnean) species, (2) records with “cf.” in front of species names which indicates the specimens have some characters of a described species but also differences, which require comparisons with type material, and (3) records as “operational taxonomy units” (OTUs) which are considered to be unique species although further assessments are required to establish their taxonomic status. -
Psammocinian Sponges(Demospongiae
Journal340 of Species Research 7(4):340347, 2018JOURNAL OF SPECIES RESEARCH Vol. 7, No. 4 Psammocinian sponges (Demospongiae: Dictyoceratida: Irciniidae) from Korea Young A Kim1,*, Kyung Jin Lee2 and Chung Ja Sim1 1Department of Biological Sciences and Biotechnology, Hannam University, Daejeon 34430, Republic of Korea 2National Institute of Biological Resources, Incheon 22689, Republic of Korea *Correspondent: [email protected] Four psammocinian species (Demospongiae: Dictyoceratida: Irciniidae) are described from Gageodo and Je judo Islands, Korea. Among them, three are new species, Psammocinia rana, P. massa and P. vermins, which are very different from other recorded species. Secondary fibres ofPsammocinia rana are mostly wide plate like shape with large perforation. Primary and secondary fibres of Psammocinia massa are lumped together in a thick mass through numerous areas. Psammocinia vemis is similar to P. mosulpia in skeletal structure, but differs in size of cored sands in primary fibres. The fourth species, we reclassify from Ircinia chupoensis to Psammocinia chupoensis based on more detailed observation of the skeletal structure. Ircinia only has sand cored primary fibres, while the observed species, has sand cored primary and secondary fibres. Keywords: Dictyoceratida, Korea, new species, Psammocinia Ⓒ 2018 National Institute of Biological Resources DOI:10.12651/JSR.2018.7.4.340 INTRODUCTION do Islands, Korea. Individuals were collected from depths of 1520 m using SCUBA diving during 2002-2009. Col The genus Psammocinia in family Irciniidae is charac lected specimens were preserved in 95% ethyl alcohol, terized by sand armored surface and skeletal morpholo and identified based on their morphological characteris gy, comprising of a regular and reticulate fibre skeleton. -
Sponges of the Caribbean: Linking Sponge Morphology and Associated Bacterial Communities Ericka Ann Poppell
University of Richmond UR Scholarship Repository Master's Theses Student Research 5-2011 Sponges of the Caribbean: linking sponge morphology and associated bacterial communities Ericka Ann Poppell Follow this and additional works at: http://scholarship.richmond.edu/masters-theses Part of the Biology Commons Recommended Citation Poppell, Ericka Ann, "Sponges of the Caribbean: linking sponge morphology and associated bacterial communities" (2011). Master's Theses. Paper 847. This Thesis is brought to you for free and open access by the Student Research at UR Scholarship Repository. It has been accepted for inclusion in Master's Theses by an authorized administrator of UR Scholarship Repository. For more information, please contact [email protected]. ABSTRACT SPONGES OF THE CARIBBEAN: LINKING SPONGE MORPHOLOGY AND ASSOCIATED BACTERIAL COMMUNITIES By: Ericka Ann Poppell, B.S. A thesis submitted in partial fulfillment of the requirements for the degree of Master of Science at the University of Richmond University of Richmond, May 2011 Thesis Director: Malcolm S. Hill, Ph.D., Professor, Department of Biology The ecological and evolutionary relationship between sponges and their symbiotic microflora remains poorly understood, which limits our ability to understand broad scale patterns in benthic-pelagic coupling on coral reefs. Previous research classified sponges into two different categories of sponge-microbial associations: High Microbial Abundance (HMA) and Low Microbial Abundance (LMA) sponges. Choanocyte chamber morphology and density was characterized in representatives of HMA and LMA sponges using scanning electron I)licroscopy from freeze-fractured tissue. Denaturing Gradient Gel Electrophoresis was used to examine taxonomic differences among the bacterial communities present in a variety of tropical sponges. -
Dictyoceratida, Demospongiae): Comparison of Two Populations Living Under Contrasted Environmental Conditions
Sexual Reproduction of Hippospongia communis (Lamarck, 1814) (Dictyoceratida, Demospongiae): comparison of two populations living under contrasted environmental conditions. Zarrouk Souad, Alexander Ereskovsky, Karim Mustapha, Amor Abed, Thierry Perez To cite this version: Zarrouk Souad, Alexander Ereskovsky, Karim Mustapha, Amor Abed, Thierry Perez. Sexual Repro- duction of Hippospongia communis (Lamarck, 1814) (Dictyoceratida, Demospongiae): comparison of two populations living under contrasted environmental conditions. Marine Ecology, Wiley, 2013, 34, pp.432-442. 10.1111/maec.12043. hal-01456660 HAL Id: hal-01456660 https://hal.archives-ouvertes.fr/hal-01456660 Submitted on 13 Apr 2018 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Marine Ecology. ISSN 0173-9565 ORIGINAL ARTICLE Sexual reproduction of Hippospongia communis (Lamarck, 1814) (Dictyoceratida, Demospongiae): comparison of two populations living under contrasting environmental conditions Souad Zarrouk1,2, Alexander V. Ereskovsky3, Karim Ben Mustapha1, Amor El Abed2 & Thierry Perez 3 -
National Monitoring Program for Biodiversity and Non-Indigenous Species in Egypt
National monitoring program for biodiversity and non-indigenous species in Egypt January 2016 1 TABLE OF CONTENTS page Acknowledgements 3 Preamble 4 Chapter 1: Introduction 8 Overview of Egypt Biodiversity 37 Chapter 2: Institutional and regulatory aspects 39 National Legislations 39 Regional and International conventions and agreements 46 Chapter 3: Scientific Aspects 48 Summary of Egyptian Marine Biodiversity Knowledge 48 The Current Situation in Egypt 56 Present state of Biodiversity knowledge 57 Chapter 4: Development of monitoring program 58 Introduction 58 Conclusions 103 Suggested Monitoring Program Suggested monitoring program for habitat mapping 104 Suggested marine MAMMALS monitoring program 109 Suggested Marine Turtles Monitoring Program 115 Suggested Monitoring Program for Seabirds 117 Suggested Non-Indigenous Species Monitoring Program 121 Chapter 5: Implementation / Operational Plan 128 Selected References 130 Annexes 141 2 AKNOWLEGEMENTS 3 Preamble The Ecosystem Approach (EcAp) is a strategy for the integrated management of land, water and living resources that promotes conservation and sustainable use in an equitable way, as stated by the Convention of Biological Diversity. This process aims to achieve the Good Environmental Status (GES) through the elaborated 11 Ecological Objectives and their respective common indicators. Since 2008, Contracting Parties to the Barcelona Convention have adopted the EcAp and agreed on a roadmap for its implementation. First phases of the EcAp process led to the accomplishment of 5 steps of the scheduled 7-steps process such as: 1) Definition of an Ecological Vision for the Mediterranean; 2) Setting common Mediterranean strategic goals; 3) Identification of an important ecosystem properties and assessment of ecological status and pressures; 4) Development of a set of ecological objectives corresponding to the Vision and strategic goals; and 5) Derivation of operational objectives with indicators and target levels. -
Sponge Fauna in the Sea of Marmara
www.trjfas.org ISSN 1303-2712 Turkish Journal of Fisheries and Aquatic Sciences 16: 51-59 (2016) DOI: 10.4194/1303-2712-v16_1_06 RESEARCH PAPER Sponge Fauna in the Sea of Marmara Bülent Topaloğlu1,*, Alper Evcen2, Melih Ertan Çınar2 1 Istanbul University, Department of Marine Biology, Faculty of Fisheries, 34131 Vezneciler, İstanbul, Turkey. 2 Ege University, Department of Hydrobiology, Faculty of Fisheries, 35100 Bornova, İzmir, Turkey. * Corresponding Author: Tel.: +90.533 2157727; Fax: +90.512 40379; Received 04 December 2015 E-mail: [email protected] Accepted 08 February 2016 Abstract Sponge species collected along the coasts of the Sea of the Marmara in 2012-2013 were identified. A total of 30 species belonging to 21 families were found, of which four species (Ascandra contorta, Paraleucilla magna, Raspailia (Parasyringella) agnata and Polymastia penicillus) are new records for the eastern Mediterranean, while six species [A. contorta, P. magna, Chalinula renieroides, P. penicillus, R. (P.) agnata and Spongia (Spongia) nitens] are new records for the marine fauna of Turkey and 12 species are new records for the Sea of Marmara. Sponge specimens were generally collected in shallow water, but two species (Thenea muricata and Rhizaxinella elongata) were found at depths deeper than 100 m. One alien species (P. magna) was found at 10 m depth at station K18 (Büyükada). The morphological and distributional features of the species that are new to the Turkish marine fauna are presented. Keywords: Porifera, Benthos, Invertebrate, Turkish Straits System. Marmara Denizi Sünger Faunası Özet Bu çalışmada, Marmara Denizi ve kıyılarında 2012-2013 yılları arasında toplanan Sünger örnekleri tanımlanmıştır. -
Marine Spongin: Naturally Prefabricated 3D Scaffold-Based Biomaterial
marine drugs Review Marine Spongin: Naturally Prefabricated 3D Scaffold-Based Biomaterial Teofil Jesionowski 1,*, Małgorzata Norman 1, Sonia Z˙ ółtowska-Aksamitowska 1, Iaroslav Petrenko 2, Yvonne Joseph 3 ID and Hermann Ehrlich 2,* 1 Institute of Chemical Technology and Engineering, Faculty of Chemical Technology, Poznan University of Technology, Berdychowo 4, 60965 Poznan, Poland; [email protected] (M.N.); [email protected] (S.Z.-A.)˙ 2 Institute of Experimental Physics, TU Bergakademie Freiberg, Leipziger str. 23, 09559 Freiberg, Germany; [email protected] 3 Institute of Electronics and Sensor Materials, TU Bergakademie Freiberg, Gustav-Zeuner-Str. 3, 09599 Freiberg, Germany; [email protected] * Correspondence: teofi[email protected] (T.J.); [email protected] (H.E.); Tel.: +48-61-665-3720 (T.J.); +49-3731-39-2867 (H.E.) Received: 30 January 2018; Accepted: 6 March 2018; Published: 9 March 2018 Abstract: The biosynthesis, chemistry, structural features and functionality of spongin as a halogenated scleroprotein of keratosan demosponges are still paradigms. This review has the principal goal of providing thorough and comprehensive coverage of spongin as a naturally prefabricated 3D biomaterial with multifaceted applications. The history of spongin’s discovery and use in the form of commercial sponges, including their marine farming strategies, have been analyzed and are discussed here. Physicochemical and material properties of spongin-based scaffolds are also presented. The review also focuses on prospects and trends in applications of spongin for technology, materials science and biomedicine. Special attention is paid to applications in tissue engineering, adsorption of dyes and extreme biomimetics. -
Two New Haplosclerid Sponges from Caribbean Panama with Symbiotic Filamentous Cyanobacteria, and an Overview of Sponge-Cyanobacteria Associations
PORIFERA RESEARCH: BIODIVERSITY, INNOVATION AND SUSTAINABILITY - 2007 31 Two new haplosclerid sponges from Caribbean Panama with symbiotic filamentous cyanobacteria, and an overview of sponge-cyanobacteria associations Maria Cristina Diaz'12*>, Robert W. Thacker<3), Klaus Rutzler(1), Carla Piantoni(1) (1) Invertebrate Zoology, National Museum of Natural History, Smithsonian Institution, Washington, D.C. 20560-0163, USA. [email protected] (2) Museo Marino de Margarita, Blvd. El Paseo, Boca del Rio, Margarita, Edo. Nueva Esparta, Venezuela. [email protected] <3) Department of Biology, University of Alabama at Birmingham, Birmingham, AL 35294-1170, USA. [email protected] Abstract: Two new species of the order Haplosclerida from open reef and mangrove habitats in the Bocas del Toro region (Panama) have an encrusting growth form (a few mm thick), grow copiously on shallow reef environments, and are of dark purple color from dense populations of the cyanobacterial symbiont Oscillatoria spongeliae. Haliclona (Soestella) walentinae sp. nov. (Chalinidae) is dark purple outside and tan inside, and can be distinguished by its small oscules with radial, transparent canals. The interior is tan, while the consistency is soft and elastic. The species thrives on some shallow reefs, profusely overgrowing fire corals (Millepora spp.), soft corals, scleractinians, and coral rubble. Xestospongia bocatorensis sp. nov. (Petrosiidae) is dark purple, inside and outside, and its oscules are on top of small, volcano-shaped mounds and lack radial canals. The sponge is crumbly and brittle. It is found on live coral and coral rubble on reefs, and occasionally on mangrove roots. The two species have three characteristics that make them unique among the families Chalinidae and Petrosiidae: filamentous, multicellular cyanobacterial symbionts rather than unicellular species; high propensity to overgrow other reef organisms and, because of their symbionts, high rate of photosynthetic production. -
24-O-Ethylmanoalide, a Manoalide-Related Sesterterpene from the Marine Sponge Luffariella Cf
24-O-ethylmanoalide, a manoalide-related sesterterpene from the marine sponge Luffariella cf. variabilis Anne Gauvin-Bialecki, Maurice Aknin, Jacqueline Smadja To cite this version: Anne Gauvin-Bialecki, Maurice Aknin, Jacqueline Smadja. 24-O-ethylmanoalide, a manoalide-related sesterterpene from the marine sponge Luffariella cf. variabilis. Molecules, MDPI, 2008, 13 (12), pp.3184–3191. 10.3390/molecules13123184. hal-01188157 HAL Id: hal-01188157 https://hal.univ-reunion.fr/hal-01188157 Submitted on 13 May 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Distributed under a Creative Commons Attribution| 4.0 International License Molecules 2008, 13, 3184-3191; DOI: 10.3390/molecules13123184 OPEN ACCESS molecules ISSN 1420-3049 www.mdpi.com/journal/molecules Article 24-O-Ethylmanoalide, a Manoalide-related Sesterterpene from the Marine sponge Luffariella cf. variabilis Anne Gauvin-Bialecki *, Maurice Aknin and Jacqueline Smadja Université de la Réunion, Laboratoire de Chimie des Substances Naturelles et des Sciences des Aliments, 97 715, Saint-Denis, La Réunion, France * Author to whom correspondence should be addressed; E-mail: [email protected]; Tel: +262 262 93 81 97; Fax: +262 262 93 81 83. Received: 4 November 2008; in revised form: 5 December 2008 / Accepted: 11 December 2008 / Published: 15 December 2008 Abstract: A new manoalide-related sesterterpene, 24-O-ethylmanoalide (3), was isolated from the Indian Ocean sponge Luffariella cf.