Patterns of Inheritance
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Transformations of Lamarckism Vienna Series in Theoretical Biology Gerd B
Transformations of Lamarckism Vienna Series in Theoretical Biology Gerd B. M ü ller, G ü nter P. Wagner, and Werner Callebaut, editors The Evolution of Cognition , edited by Cecilia Heyes and Ludwig Huber, 2000 Origination of Organismal Form: Beyond the Gene in Development and Evolutionary Biology , edited by Gerd B. M ü ller and Stuart A. Newman, 2003 Environment, Development, and Evolution: Toward a Synthesis , edited by Brian K. Hall, Roy D. Pearson, and Gerd B. M ü ller, 2004 Evolution of Communication Systems: A Comparative Approach , edited by D. Kimbrough Oller and Ulrike Griebel, 2004 Modularity: Understanding the Development and Evolution of Natural Complex Systems , edited by Werner Callebaut and Diego Rasskin-Gutman, 2005 Compositional Evolution: The Impact of Sex, Symbiosis, and Modularity on the Gradualist Framework of Evolution , by Richard A. Watson, 2006 Biological Emergences: Evolution by Natural Experiment , by Robert G. B. Reid, 2007 Modeling Biology: Structure, Behaviors, Evolution , edited by Manfred D. Laubichler and Gerd B. M ü ller, 2007 Evolution of Communicative Flexibility: Complexity, Creativity, and Adaptability in Human and Animal Communication , edited by Kimbrough D. Oller and Ulrike Griebel, 2008 Functions in Biological and Artifi cial Worlds: Comparative Philosophical Perspectives , edited by Ulrich Krohs and Peter Kroes, 2009 Cognitive Biology: Evolutionary and Developmental Perspectives on Mind, Brain, and Behavior , edited by Luca Tommasi, Mary A. Peterson, and Lynn Nadel, 2009 Innovation in Cultural Systems: Contributions from Evolutionary Anthropology , edited by Michael J. O ’ Brien and Stephen J. Shennan, 2010 The Major Transitions in Evolution Revisited , edited by Brett Calcott and Kim Sterelny, 2011 Transformations of Lamarckism: From Subtle Fluids to Molecular Biology , edited by Snait B. -
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Patterns of DNA methylation on the human X chromosome and use in analyzing X-chromosome inactivation by Allison Marie Cotton B.Sc., The University of Guelph, 2005 A THESIS SUBMITTED IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY in The Faculty of Graduate Studies (Medical Genetics) THE UNIVERSITY OF BRITISH COLUMBIA (Vancouver) January 2012 © Allison Marie Cotton, 2012 Abstract The process of X-chromosome inactivation achieves dosage compensation between mammalian males and females. In females one X chromosome is transcriptionally silenced through a variety of epigenetic modifications including DNA methylation. Most X-linked genes are subject to X-chromosome inactivation and only expressed from the active X chromosome. On the inactive X chromosome, the CpG island promoters of genes subject to X-chromosome inactivation are methylated in their promoter regions, while genes which escape from X- chromosome inactivation have unmethylated CpG island promoters on both the active and inactive X chromosomes. The first objective of this thesis was to determine if the DNA methylation of CpG island promoters could be used to accurately predict X chromosome inactivation status. The second objective was to use DNA methylation to predict X-chromosome inactivation status in a variety of tissues. A comparison of blood, muscle, kidney and neural tissues revealed tissue-specific X-chromosome inactivation, in which 12% of genes escaped from X-chromosome inactivation in some, but not all, tissues. X-linked DNA methylation analysis of placental tissues predicted four times higher escape from X-chromosome inactivation than in any other tissue. Despite the hypomethylation of repetitive elements on both the X chromosome and the autosomes, no changes were detected in the frequency or intensity of placental Cot-1 holes. -
Experiment 1: Linkage Mapping in Drosophila Melanogaster
BIO 184 Laboratory Manual Page 1 CSU, Sacramento Updated: 9/1/2004 EXPERIMENT 1: LINKAGE MAPPING IN DROSOPHILA MELANOGASTER DAY ONE: INTRODUCTION TO DROSOPHILA OBJECTIVES: Today's laboratory will introduce you the common fruit fly, Drosophila melanogaster, as an experimental organism and prepare you for setting up a mating experiment during the next lab period. After today’s experiment you should be able to: Properly anesthetize and handle Drosophila. Properly adjust a stereo dissecting scope and light source for optimal viewing of Drosophila. Distinguish males and females, and have a record for your own reference. Distinguish wild-type from mutant characteristics and have a record for your own reference. Understand the meaning of “single, double, triple, and multiple mutants.” Be familiar with symbols for mutant and wild-type alleles used by Drosophila geneticists. INTRODUCTION: Drosophila melanogaster is used extensively in genetic breeding experiments. It is an ideal testing organism for geneticists because it has a short life cycle, exhibits great variability in inherited characteristics, and may be conveniently raised in the laboratory to produce large numbers of offspring. Drosophila can be used in genetic crosses to demonstrate Mendelian inheritance as well as the unusual inheritance of genes located on the X chromosome (“sex linkage”). The organism is also useful for demonstrating the principles of genetic mapping, which you will be exploring in this first experiment. To do this, you will be performing a cross with real flies to demonstrate the principles behind genetic mapping. Your success in these experiments will depend greatly on your ability to properly handle the flies and to accurately observe their characteristics. -
Basic Genetic Terms for Teachers
Student Name: Date: Class Period: Page | 1 Basic Genetic Terms Use the available reference resources to complete the table below. After finding out the definition of each word, rewrite the definition using your own words (middle column), and provide an example of how you may use the word (right column). Genetic Terms Definition in your own words An example Allele Different forms of a gene, which produce Different alleles produce different hair colors—brown, variations in a genetically inherited trait. blond, red, black, etc. Genes Genes are parts of DNA and carry hereditary Genes contain blue‐print for each individual for her or information passed from parents to children. his specific traits. Dominant version (allele) of a gene shows its Dominant When a child inherits dominant brown‐hair gene form specific trait even if only one parent passed (allele) from dad, the child will have brown hair. the gene to the child. When a child inherits recessive blue‐eye gene form Recessive Recessive gene shows its specific trait when (allele) from both mom and dad, the child will have blue both parents pass the gene to the child. eyes. Homozygous Two of the same form of a gene—one from Inheriting the same blue eye gene form from both mom and the other from dad. parents result in a homozygous gene. Heterozygous Two different forms of a gene—one from Inheriting different eye color gene forms from mom mom and the other from dad are different. and dad result in a heterozygous gene. Genotype Internal heredity information that contain Blue eye and brown eye have different genotypes—one genetic code. -
Lesson Plan Mendelian Inheritance
Dolan DNA Learning Center Mendelian Inheritance __________________________________________________________________________________________ Overview • Computer with internet access This 90 minute lesson (two class periods of 45 minutes) is an introduction to Mendel’s Laws of Inheritance for students in Lesson Structure grades 5 through 8. By studying inherited traits in humans such as tasting PTC paper and inherited traits in plants such as Pre-lab (45 minutes) – Day 1 maize, we can understand how traits are passed down through Teacher Prep generations. A discussion of dominant and recessive traits in humans will encourage students to further explore their • Become familiar with Lab Center inheritance as well as their family inheritance. http://www.dnalc.org/labcenter/mendeliangenetics/m endeliangenetics_d.html Learning Outcomes • Print and copy Background Reading from the Students will be able to: Student Lab Notebook on the Lab center. • discuss the contributions of Gregor Mendel and his • Print and copy Student Pre-lab Worksheets from experiments with the garden pea. the Student Lab Notebook on the Lab center. • review the structure of DNA and chromosomes. • Cut paper strips for Sentence Strips activity. • compare a dominant trait to a recessive trait. • Make sure computers with Internet access are • compare a homozygous trait to a heterozygous trait. available. • identify traits in themselves that are either dominant or recessive. Before class • use maize as a model organism to study Mendelian Students will receive the background reading to read for inheritance. homework the night before starting lab. They will write 2 to 3 • demonstrate Mendel’s Law of Dominance and Law questions they have about the background information. -
Identification of Novel Genes for X-Linked Mental Retardation
20.\o. ldent¡f¡cat¡on of Novel Genes for X-linked Mental Retardation Adelaide A thesis submitted for the degree of Dootor of Philosophy to the University of by Marie Mangelsdorf BSc (Hons) School ofMedicine Department of Paediatrics, Women's and Children's Hospital May 2003 Corrections The following references should be referred to in the text as: Page 2,line 2: (Birch et al., 1970) Page 2,line 2: (Moser et al., 1983) Page 3, line 15: (Martin and Bell, 1943) Page 3, line 4 and line 9: (Stevenson et a1.,2000) Page 77,line 5: (Monaco et a|.,1986) And in the reference list as: Birch H. G., Richardson S. ,{., Baird D., Horobin, G. and Ilsley, R. (1970) Mental Subnormality in the Community: A Clinical and Epidemiological Study. Williams and Wilkins, Baltimore. Martin J. P. and Bell J. (1943). A pedigree of mental defect showing sex-linkage . J. Neurol. Psychiatry 6: 154. Monaco 4.P., Nerve R.L., Colletti-Feener C., Bertelson C.J., Kurnit D.M. and Kunkel L.M. (1986) Isolation of candidate cDNAs for portions of the Duchenne muscular dystrophy gene. Nature 3232 646-650. Moser H.W., Ramey C.T. and Leonard C.O. (1933) In Principles and Practice of Medical Genetics (Emery A.E.H. and Rimoin D.L., Eds). Churchill Livingstone, Edinburgh UK Penrose L. (1938) A clinical and genetic study of 1280 cases of mental defect. (The Colchester survey). Medical Research Council, London, UK. Stevenson R.E., Schwartz C.E. and Schroer R.J. (2000) X-linked Mental Retardation. Oxford University Press. -
Basic Genetic Concepts & Terms
Basic Genetic Concepts & Terms 1 Genetics: what is it? t• Wha is genetics? – “Genetics is the study of heredity, the process in which a parent passes certain genes onto their children.” (http://www.nlm.nih.gov/medlineplus/ency/article/002048. htm) t• Wha does that mean? – Children inherit their biological parents’ genes that express specific traits, such as some physical characteristics, natural talents, and genetic disorders. 2 Word Match Activity Match the genetic terms to their corresponding parts of the illustration. • base pair • cell • chromosome • DNA (Deoxyribonucleic Acid) • double helix* • genes • nucleus Illustration Source: Talking Glossary of Genetic Terms http://www.genome.gov/ glossary/ 3 Word Match Activity • base pair • cell • chromosome • DNA (Deoxyribonucleic Acid) • double helix* • genes • nucleus Illustration Source: Talking Glossary of Genetic Terms http://www.genome.gov/ glossary/ 4 Genetic Concepts • H describes how some traits are passed from parents to their children. • The traits are expressed by g , which are small sections of DNA that are coded for specific traits. • Genes are found on ch . • Humans have two sets of (hint: a number) chromosomes—one set from each parent. 5 Genetic Concepts • Heredity describes how some traits are passed from parents to their children. • The traits are expressed by genes, which are small sections of DNA that are coded for specific traits. • Genes are found on chromosomes. • Humans have two sets of 23 chromosomes— one set from each parent. 6 Genetic Terms Use library resources to define the following words and write their definitions using your own words. – allele: – genes: – dominant : – recessive: – homozygous: – heterozygous: – genotype: – phenotype: – Mendelian Inheritance: 7 Mendelian Inheritance • The inherited traits are determined by genes that are passed from parents to children. -
Choroideremia* Clinical and Genetic Aspects by Arnold Sorsby, A
Br J Ophthalmol: first published as 10.1136/bjo.36.10.547 on 1 October 1952. Downloaded from Brit. J. Ophthal. (1952) 36, 547. CHOROIDEREMIA* CLINICAL AND GENETIC ASPECTS BY ARNOLD SORSBY, A. FRANCESCHETTI, RUBY JOSEPH, AND J. B. DAVEY Review of Literature (1) HISTORICAL.-In the fully-developed state, choroideremia presents a characteristic and unmistakable picture of which Fig. 1 and Colour Plate 1(a and b) may be taken as examples. The almost total lack of choroidal vessels strongly suggests a developmental anomaly. In fact most of the early writers on, the subject, such as Mauthner (1872) and Koenig (1874), stressed the likeness to choroidal coloboma. As cases accumulated, less extreme pictures were observed, and these raised the possibility that choroideremia was a progressive affection and not a congenital anomaly-a view that gained some support from the fact that, apart from showing some choroidal vessels, these less extreme cases also showed pigmentary changes, sometimes reminiscent of retinitis pigmentosa (Zorn, 1920; Beckershaus, 1926; Werkle, 1931). copyright. Furthermore, the recognition of gyrate atrophy as a separate entity (Cutler, 1895) fitted in well with such a reading. The patches of atrophy seen in that affection could well be visualized as an early stage of the generalized atrophy seen in choroideremia, and since there was some evidence that gyrate atrophy was itself a variant of retinitis pigmentosa-for the affection is reputed to have been observed in families diagnosed as suffering from retinitis pigmentosa (see Usher, 1935)-the suggestion emerged that choroideremia, far from being a congenital stationary affection, was an http://bjo.bmj.com/ extreme variant of retinitis pigmentosa. -
Chromosomes in the Clinic: the Visual Localization and Analysis of Genetic Disease in the Human Genome
University of Pennsylvania ScholarlyCommons Publicly Accessible Penn Dissertations 2013 Chromosomes in the Clinic: The Visual Localization and Analysis of Genetic Disease in the Human Genome Andrew Joseph Hogan University of Pennsylvania, [email protected] Follow this and additional works at: https://repository.upenn.edu/edissertations Part of the History of Science, Technology, and Medicine Commons Recommended Citation Hogan, Andrew Joseph, "Chromosomes in the Clinic: The Visual Localization and Analysis of Genetic Disease in the Human Genome" (2013). Publicly Accessible Penn Dissertations. 873. https://repository.upenn.edu/edissertations/873 This paper is posted at ScholarlyCommons. https://repository.upenn.edu/edissertations/873 For more information, please contact [email protected]. Chromosomes in the Clinic: The Visual Localization and Analysis of Genetic Disease in the Human Genome Abstract This dissertation examines the visual cultures of postwar biomedicine, with a particular focus on how various techniques, conventions, and professional norms have shaped the `look', classification, diagnosis, and understanding of genetic diseases. Many scholars have previously highlighted the `informational' approaches of postwar genetics, which treat the human genome as an expansive data set comprised of three billion DNA nucleotides. Since the 1950s however, clinicians and genetics researchers have largely interacted with the human genome at the microscopically visible level of chromosomes. Mindful of this, my dissertation examines -
7.013 S18 Recitation 5
7.013: Spring 2018: MIT 7.013 Recitation 5 – Spring 2018 (Note: The recitation summary should NOT be regarded as the substitute for lectures) Summary of Lecture 6 (2/23): Classic experiment by Morgan that laid the foundation of human genetics: Morgan identified a gene located on the X chromosome that controls eye color in fruit flies. Since females have XX as their sex chromosomes, they have two alleles of each gene located on the X chromosome. In comparison, males have XY as their sex chromosomes and will only have one allele for all the genes located on the X chromosome (i.e. they are hemizygous). Morgan designed a mating experiment between a homozygous recessive female fly with white eyes (genotype XwXw) with a normal male fly with red eyes (genotype X+Y) and obtained red-eyed females (genotype XwX+) and white-eyed male flies (genotype XwY). This proved that white-eye color is a recessive trait and the allele regulating the eye color is located on the X- chromosome (i.e. eye color in flies shows an X- linked recessive mode of inheritance). You can read through the original article (link below) if interested! http://www.nature.com/scitable/topicpage/thomas-hunt-morgan-and-sex-linkage-452 Pedigrees: A pedigree shows how a trait runs through a family. A person displaying the trait is indicated by a filled in circle (female) or square (male). Simple human traits that are determined by a single gene display one of six different modes of inheritance: autosomal dominant, autosomal recessive, X-linked dominant or X-linked recessive, Y- linked recessive or dominant and mitochondrial inheritance (which is always passed on from the mother to all her children). -
Linkage Groups of Protein-Coding Genes in Western Palearctic Water Frogs Reveal Extensive Evolutionary Conservation
Copyright 0 1997 by the Genetics Society of America Linkage Groups of Protein-Coding Genes in Western Palearctic Water Frogs Reveal Extensive Evolutionary Conservation Hansjiirg Hotz,* Thomas Uzzellt and Leszek Berger: * Zoologisches Museum, Universitat Zurich-Irchel, CH-8057 Zurich, Switzerland, tAcademy of Natural Sciences, Philadelphia, Pennsylvania 19103 and $Research Centrefor Agricultural and Forest Environment, Polish Academy of Sciences, PL-60-809 Poznali, Poland Manuscript received October 14, 1996 Accepted for publication April 21, 1997 ABSTRACT Among progeny of a hybrid (Rana shqiperica X R. lessonae) X R lessonae, 14 of 22 loci form four linkage groups (LGs) : (1) mitochondrialaspartate aminotransferase, carbonate dehydratase-2, esterase 4, peptidase 0; (2) mannosephosphate isomerase, lactate dehydrogenase-B, sex, hexokinase-1, peptidase B; (3) albumin, fructose- biphosphatase-1, guanine deaminase; (4) mitochondrial superoxide dismutase, cytosolic malic enzyme, xanthine oxidase. Fructose-biphosphate aldolase-2 and cytosolic aspartate aminotransferase possibly form a fifth LG. Mito- chondrial aconitatehydratase, a-glucosidase, glyceraldehyde-3+hosphate dehydrogenase, phosphogluconate dehydroge- nase, and phosphoglucomutase-2 are unlinked to other loci. All testable linkages (among eightloci of LGs 1, 2, 3, and 4) are shared with eastern Palearctic water frogs. Including published data, 44 protein loci can be assigned to 10 of the 13 chromosomes in Holarctic Rana. Of testable pairs among 18 protein loci, agreementbetween Palearctic andNearctic Rana is complete (125 unlinked,14 linked pairs among 14 loci of five syntenies), and Holarctic Rana and Xenopus laevis are highly concordant (125 shared nonlinkages, 13 shared linkages, three differences). Several Rana syntenies occur in mammals and fish. Many syntenies apparentlyhave persisted for 60-140 X lo6years (frogs), some even for 350-400 X lo6 years (mammals and teleosts). -
Sex Determination in the Genus Salmo
SEX DETERMINATION IN THE GENUS SALMO by Jieying Li (李杰颖) Bachelor of Science, Simon Fraser University 2008 THESIS SUBMITTED IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF MASTER OF SCIENCE In the Department of Molecular Biology and Biochemistry © Jieying Li 2010 SIMON FRASER UNIVERSITY Fall 2010 All rights reserved. However, in accordance with the Copyright Act of Canada, this work may be reproduced, without authorization, under the conditions for Fair Dealing. Therefore, limited reproduction of this work for the purposes of private study, research, criticism, review and news reporting is likely to be in accordance with the law, particularly if cited appropriately. Approval Name: Jieying Li Degree: Master of Science Title of Thesis: Sex determination in the genus Salmo Examining Committee: Chair: Mark Paetzel Associate Professor, Department of Molecular Biology and Biochemistry ___________________________________________ William S. Davidson Senior Supervisor Professor, Department of Molecular Biology and Biochemistry ___________________________________________ Jack Chen Supervisor Associate Professor, Department of Molecular Biology and Biochemistry ___________________________________________ Lynne Quarmby Supervisor Professor, Department of Molecular Biology and Biochemistry ___________________________________________ Robert H. Devlin Internal Examiner DFO Scientists Fisheries and Oceans Canada Date Defended/Approved: December 9, 2010 ii Declaration of Partial Copyright Licence The author, whose copyright is declared on the title page of this work, has granted to Simon Fraser University the right to lend this thesis, project or extended essay to users of the Simon Fraser University Library, and to make partial or single copies only for such users or in response to a request from the library of any other university, or other educational institution, on its own behalf or for one of its users.