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The 2014 Golden Gate National Parks Bioblitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event
National Park Service U.S. Department of the Interior Natural Resource Stewardship and Science The 2014 Golden Gate National Parks BioBlitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event Natural Resource Report NPS/GOGA/NRR—2016/1147 ON THIS PAGE Photograph of BioBlitz participants conducting data entry into iNaturalist. Photograph courtesy of the National Park Service. ON THE COVER Photograph of BioBlitz participants collecting aquatic species data in the Presidio of San Francisco. Photograph courtesy of National Park Service. The 2014 Golden Gate National Parks BioBlitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event Natural Resource Report NPS/GOGA/NRR—2016/1147 Elizabeth Edson1, Michelle O’Herron1, Alison Forrestel2, Daniel George3 1Golden Gate Parks Conservancy Building 201 Fort Mason San Francisco, CA 94129 2National Park Service. Golden Gate National Recreation Area Fort Cronkhite, Bldg. 1061 Sausalito, CA 94965 3National Park Service. San Francisco Bay Area Network Inventory & Monitoring Program Manager Fort Cronkhite, Bldg. 1063 Sausalito, CA 94965 March 2016 U.S. Department of the Interior National Park Service Natural Resource Stewardship and Science Fort Collins, Colorado The National Park Service, Natural Resource Stewardship and Science office in Fort Collins, Colorado, publishes a range of reports that address natural resource topics. These reports are of interest and applicability to a broad audience in the National Park Service and others in natural resource management, including scientists, conservation and environmental constituencies, and the public. The Natural Resource Report Series is used to disseminate comprehensive information and analysis about natural resources and related topics concerning lands managed by the National Park Service. -
Protocols for Monitoring Harmful Algal Blooms for Sustainable Aquaculture and Coastal Fisheries in Chile (Supplement Data)
Protocols for monitoring Harmful Algal Blooms for sustainable aquaculture and coastal fisheries in Chile (Supplement data) Provided by Kyoko Yarimizu, et al. Table S1. Phytoplankton Naming Dictionary: This dictionary was constructed from the species observed in Chilean coast water in the past combined with the IOC list. Each name was verified with the list provided by IFOP and online dictionaries, AlgaeBase (https://www.algaebase.org/) and WoRMS (http://www.marinespecies.org/). The list is subjected to be updated. Phylum Class Order Family Genus Species Ochrophyta Bacillariophyceae Achnanthales Achnanthaceae Achnanthes Achnanthes longipes Bacillariophyta Coscinodiscophyceae Coscinodiscales Heliopeltaceae Actinoptychus Actinoptychus spp. Dinoflagellata Dinophyceae Gymnodiniales Gymnodiniaceae Akashiwo Akashiwo sanguinea Dinoflagellata Dinophyceae Gymnodiniales Gymnodiniaceae Amphidinium Amphidinium spp. Ochrophyta Bacillariophyceae Naviculales Amphipleuraceae Amphiprora Amphiprora spp. Bacillariophyta Bacillariophyceae Thalassiophysales Catenulaceae Amphora Amphora spp. Cyanobacteria Cyanophyceae Nostocales Aphanizomenonaceae Anabaenopsis Anabaenopsis milleri Cyanobacteria Cyanophyceae Oscillatoriales Coleofasciculaceae Anagnostidinema Anagnostidinema amphibium Anagnostidinema Cyanobacteria Cyanophyceae Oscillatoriales Coleofasciculaceae Anagnostidinema lemmermannii Cyanobacteria Cyanophyceae Oscillatoriales Microcoleaceae Annamia Annamia toxica Cyanobacteria Cyanophyceae Nostocales Aphanizomenonaceae Aphanizomenon Aphanizomenon flos-aquae -
Characteristic Microbiomes Correlate with Polyphosphate Accumulation of Marine Sponges in South China Sea Areas
microorganisms Article Characteristic Microbiomes Correlate with Polyphosphate Accumulation of Marine Sponges in South China Sea Areas 1 1, 1 1 2, 1,3, Huilong Ou , Mingyu Li y, Shufei Wu , Linli Jia , Russell T. Hill * and Jing Zhao * 1 College of Ocean and Earth Science of Xiamen University, Xiamen 361005, China; [email protected] (H.O.); [email protected] (M.L.); [email protected] (S.W.); [email protected] (L.J.) 2 Institute of Marine and Environmental Technology, University of Maryland Center for Environmental Science, Baltimore, MD 21202, USA 3 Xiamen City Key Laboratory of Urban Sea Ecological Conservation and Restoration (USER), Xiamen University, Xiamen 361005, China * Correspondence: [email protected] (J.Z.); [email protected] (R.T.H.); Tel.: +86-592-288-0811 (J.Z.); Tel.: +(410)-234-8802 (R.T.H.) The author contributed equally to the work as co-first author. y Received: 24 September 2019; Accepted: 25 December 2019; Published: 30 December 2019 Abstract: Some sponges have been shown to accumulate abundant phosphorus in the form of polyphosphate (polyP) granules even in waters where phosphorus is present at low concentrations. But the polyP accumulation occurring in sponges and their symbiotic bacteria have been little studied. The amounts of polyP exhibited significant differences in twelve sponges from marine environments with high or low dissolved inorganic phosphorus (DIP) concentrations which were quantified by spectral analysis, even though in the same sponge genus, e.g., Mycale sp. or Callyspongia sp. PolyP enrichment rates of sponges in oligotrophic environments were far higher than those in eutrophic environments. -
Algae (Order Chroococcales) R
BACTEROLOGICAL REVIEWS, June 1971, p. 171-205 Vol. 35, No. 2 Copyright © 1971 American Society for Microbiology Printed in U.S.A. Purification and Properties of Unicellular Blue-Green Algae (Order Chroococcales) R. Y. STANIER, R. KUNISAWA, M. MANDEL, AND G. COHEN-BAZIRE Department of Bacteriology and Immunology, University of California, Berkeley, California 94720, and The University ofTexas, M. D. Anderson Hospital and Tumor Institute, Houston, Texas 77025 INTRODUCTION ............................................................ 171 MATERIALS AND METHODS ............................................... 173 Sources of Strains Examined .................................................. 173 Media and Conditions of Cultivation ........................................... 173 Enrichment, Isolation, and Purification of Unicellular Blue-Green Algae 176 Measurement of Absorption Spectra ............................................ 176 Determination of Fatty-Acid Composition ....................................... 176 Extraction of DNA .......................................................... 176 Determination of Mean DNA Base Composition ................................. 177 ASSIGNMENT OF STRAINS TO TYPOLOGICAL GROUPS 177 DNA BASE COMPOSITION ................................................. 181 PHENOTYPIC PROPERTIES ................................................ 184 Motility................................................................... 184 Growth in Darkness and Utilization of Organic Compounds ........................ 184 Nitrogen Fixation -
Phycogeography of Freshwater Phytoplankton: Traditional Knowledge and New Molecular Tools
Hydrobiologia (2016) 764:3–27 DOI 10.1007/s10750-015-2259-4 PHYTOPLANKTON & SPATIAL GRADIENTS Review Paper Phycogeography of freshwater phytoplankton: traditional knowledge and new molecular tools Judit Padisa´k • Ga´bor Vasas • Ga´bor Borics Received: 29 November 2014 / Revised: 6 March 2015 / Accepted: 14 March 2015 / Published online: 31 March 2015 Ó Springer International Publishing Switzerland 2015 Abstract ‘‘Everything is everywhere, but environ- relevant for biogeography of freshwater phytoplank- ments selects.’’ Is this true? The cosmopolitan nature ton. The following topics are considered: dispersal of algae, including phytoplankton, has been highlight- agents and distances; survival strategies of species; ed in many textbooks and burnt into the minds of geographic distribution of different types; patterns of biologists during their studies. However, the accumu- invasions; tools of molecular genetics; and metabo- lating knowledge on the occurrence of individual lomics to explore dispersal patterns, island biogeog- phytoplankton species in habitats where they have not raphy, and associated species–area relationships for been seen before, reports on invasive phytoplankton algae. species, and the increasing number of papers with phylogenetic trees and tracing secondary metabolites, Keywords Distribution Á Dispersal Á Invasion Á especially cyanotoxins, contradict. Phytoplankton Island biogeography Á Genomics Á Bloom-forming species, with rare exceptions, are neither cosmopoli- cyanobacteria tan, nor ubiquists. In this review paper, -
Family I. Chroococcaceae, Part 2 Francis Drouet
Butler University Botanical Studies Volume 12 Article 8 Family I. Chroococcaceae, part 2 Francis Drouet William A. Daily Follow this and additional works at: http://digitalcommons.butler.edu/botanical The utleB r University Botanical Studies journal was published by the Botany Department of Butler University, Indianapolis, Indiana, from 1929 to 1964. The cs ientific ourj nal featured original papers primarily on plant ecology, taxonomy, and microbiology. Recommended Citation Drouet, Francis and Daily, William A. (1956) "Family I. Chroococcaceae, part 2," Butler University Botanical Studies: Vol. 12, Article 8. Available at: http://digitalcommons.butler.edu/botanical/vol12/iss1/8 This Article is brought to you for free and open access by Digital Commons @ Butler University. It has been accepted for inclusion in Butler University Botanical Studies by an authorized administrator of Digital Commons @ Butler University. For more information, please contact [email protected]. Butler University Botanical Studies (1929-1964) Edited by J. E. Potzger The Butler University Botanical Studies journal was published by the Botany Department of Butler University, Indianapolis, Indiana, from 1929 to 1964. The scientific journal featured original papers primarily on plant ecology, taxonomy, and microbiology. The papers contain valuable historical studies, especially floristic surveys that document Indiana’s vegetation in past decades. Authors were Butler faculty, current and former master’s degree students and undergraduates, and other Indiana botanists. The journal was started by Stanley Cain, noted conservation biologist, and edited through most of its years of production by Ray C. Friesner, Butler’s first botanist and founder of the department in 1919. The journal was distributed to learned societies and libraries through exchange. -
DOMAIN Bacteria PHYLUM Cyanobacteria
DOMAIN Bacteria PHYLUM Cyanobacteria D Bacteria Cyanobacteria P C Chroobacteria Hormogoneae Cyanobacteria O Chroococcales Oscillatoriales Nostocales Stigonematales Sub I Sub III Sub IV F Homoeotrichaceae Chamaesiphonaceae Ammatoideaceae Microchaetaceae Borzinemataceae Family I Family I Family I Chroococcaceae Borziaceae Nostocaceae Capsosiraceae Dermocarpellaceae Gomontiellaceae Rivulariaceae Chlorogloeopsaceae Entophysalidaceae Oscillatoriaceae Scytonemataceae Fischerellaceae Gloeobacteraceae Phormidiaceae Loriellaceae Hydrococcaceae Pseudanabaenaceae Mastigocladaceae Hyellaceae Schizotrichaceae Nostochopsaceae Merismopediaceae Stigonemataceae Microsystaceae Synechococcaceae Xenococcaceae S-F Homoeotrichoideae Note: Families shown in green color above have breakout charts G Cyanocomperia Dactylococcopsis Prochlorothrix Cyanospira Prochlorococcus Prochloron S Amphithrix Cyanocomperia africana Desmonema Ercegovicia Halomicronema Halospirulina Leptobasis Lichen Palaeopleurocapsa Phormidiochaete Physactis Key to Vertical Axis Planktotricoides D=Domain; P=Phylum; C=Class; O=Order; F=Family Polychlamydum S-F=Sub-Family; G=Genus; S=Species; S-S=Sub-Species Pulvinaria Schmidlea Sphaerocavum Taxa are from the Taxonomicon, using Systema Natura 2000 . Triochocoleus http://www.taxonomy.nl/Taxonomicon/TaxonTree.aspx?id=71022 S-S Desmonema wrangelii Palaeopleurocapsa wopfnerii Pulvinaria suecica Key Genera D Bacteria Cyanobacteria P C Chroobacteria Hormogoneae Cyanobacteria O Chroococcales Oscillatoriales Nostocales Stigonematales Sub I Sub III Sub -
Microcystin Incidence in the Drinking Water of Mozambique: Challenges for Public Health Protection
toxins Review Microcystin Incidence in the Drinking Water of Mozambique: Challenges for Public Health Protection Isidro José Tamele 1,2,3 and Vitor Vasconcelos 1,4,* 1 CIIMAR/CIMAR—Interdisciplinary Center of Marine and Environmental Research, University of Porto, Terminal de Cruzeiros do Porto, Avenida General Norton de Matos, 4450-238 Matosinhos, Portugal; [email protected] 2 Institute of Biomedical Science Abel Salazar, University of Porto, R. Jorge de Viterbo Ferreira 228, 4050-313 Porto, Portugal 3 Department of Chemistry, Faculty of Sciences, Eduardo Mondlane University, Av. Julius Nyerere, n 3453, Campus Principal, Maputo 257, Mozambique 4 Faculty of Science, University of Porto, Rua do Campo Alegre, 4069-007 Porto, Portugal * Correspondence: [email protected]; Tel.: +351-223-401-817; Fax: +351-223-390-608 Received: 6 May 2020; Accepted: 31 May 2020; Published: 2 June 2020 Abstract: Microcystins (MCs) are cyanotoxins produced mainly by freshwater cyanobacteria, which constitute a threat to public health due to their negative effects on humans, such as gastroenteritis and related diseases, including death. In Mozambique, where only 50% of the people have access to safe drinking water, this hepatotoxin is not monitored, and consequently, the population may be exposed to MCs. The few studies done in Maputo and Gaza provinces indicated the occurrence of MC-LR, -YR, and -RR at a concentration ranging from 6.83 to 7.78 µg L 1, which are very high, around 7 times · − above than the maximum limit (1 µg L 1) recommended by WHO. The potential MCs-producing in · − the studied sites are mainly Microcystis species. -
Biodiversity and Temporal Distribution of Chroococcales (Cyanoprokaryota) of an Arid Mangrove on the East Coast of Baja California Sur, Mexico
Fottea 11(1): 235–244, 2011 235 Biodiversity and temporal distribution of Chroococcales (Cyanoprokaryota) of an arid mangrove on the east coast of Baja California Sur, Mexico Hilda LEÓN –TEJERA 1,, Claudia J. PÉREZ –ES T RADA 2, Gustavo MON T EJANO 1 & Elisa SERVIERE –ZARAGOZA 2 1Department of Biology, Faculty of Sciences, Universidad Nacional Autónoma de Mexico, Apartado Postal 04360, Coyoacán, Mexico, D.F. 04510, Mexico. [email protected] 2Centro de Investigaciones Biológicas del Noroeste, S.C. (CIBNOR), Mar Bermejo 195, Col. Playa Palo de Santa Rita, La Paz, B.C.S. 23090, Mexico Abstract: Arid mangroves constitute a particular biotope, with very extreme variations in ecological conditions, mainly temperature and salinity, condition that demand specific adaptations to successfully inhabit this ecosystem. Cyanoprokaryotes have not been well studied in Mexican coasts and this is the first study that contributes to the knowledge of the biodiversity of this group in an arid mangrove in Zacatecas estuary, Baja California Sur, Mexico. Samples of Avicennia germinans pneumatophores from Zacatecas estuary were collected between May 2005 and May 2006. The identification of the most representative Chroococcales produced 10 morphotypes, described mor- phologically and digitally registered for the first time for Mexico. We report species of Aphanocapsa, Chroococ- cus, Hydrococcus, Chamaecalyx, Dermocarpella and Xenococcus. Some taxa have been recorded in brackish or even marine environments from other regions, evidencing the wide geographical distribution and ecological adapt- ability of these organisms, but some others are probably new to science. Some species have a specific seasonal and vertical distribution on the pneumatophore but other have a more ample distribution. -
Climate and Hydrological Processes Explain Temporal Dissimilarity in The
Climate and hydrological processes explain temporal dissimilarity in the phytoplankton community and favor seasonal dominance of harmful and alien algae in a subtropical reservoir JONATAS ALVES1,*, ALEXANDRE MATTHIENSEN2, MÁRIO SERGIO MUNIZ TAGLIARI3 & MAURICIO MELLO PETRUCIO1,3 1 Inland Water Ecology Laboratory, Department of Ecology and Zoology, Federal University of Santa Catarina (UFSC), Córrego Grande, Florianópolis, SC, 88010970, Brazil. 2 Brazilian Agricultural Research Corporation – Embrapa Suínos e Aves, Rodovia BR-153, Km 110, Distrito de Tamanduá, Concórdia, SC, 89715899, Brazil 3 Department of Ecology and Zoology, Federal University of Santa Catarina (UFSC), Córrego Grande, Florianópolis, SC, 88040900, Brazil. * Corresponding author: [email protected] Abstract. In phytoplankton communities, dissimilarities in the species composition and abundance can be correlated with environmental variability at different spatial and temporal scales. This environmental variability can ascertain periodic replacements in phytoplankton assemblages, favoring, in some cases, the growth and dominance of specific algae groups. In this study, the occurrence of spatial/temporal dissimilarities (variation in the density of different taxonomic groups) in the phytoplankton community and their correlations with the environmental variability were studied in an artificial reservoir located in southern Brazil. Seasonal alternation of dominant groups was observed, with dominance of potential harmful cyanobacteria (Aphanizomenon spp. and Dolichospermum -
SHORT NOTE Cylindrospermopsis Raciborskii (Nostocales
Fottea 9(1): 45–47, 2009 45 SHORT NOTE Cylindrospermopsis raciborskii (Nostocales, Cyanobacteria): A brief historic overview and recent discovery in the Assiniboine River (Canada) Hedy J. KLING Algal Taxonomy and Ecology Inc. 31 Laval Drive, Winnipeg, Manitoba, R3T 2X8 Canada; e-mail: hkling@mts. net Abstract: Cylindrospermopsis raciborskii (Wo ł o s z y ń s k a ) se e n a y y a et su b b a Ra j u is a freshwater planktonic nitrogen fixing filamentous toxic cyanobacterium (blue-green alga, cyanoprokaryote) belonging to the order Nostocales. Historically, it was thought to be a tropical or subtropical alga but in the past 26 years since it was recorded in Hungary in 1978, it has been found in increasing abundance in rivers and shallow water bodies in temperate regions of Asia, Africa, Australia, Europe, North America and South America by several researchers including most recently bR a n c o & se n n a (1991), Pa d i s á k (1997), ch a P m a n & sc h e l s k e (1997), Fa b b R o et al. (1996), dv o ř á k & ha š l e R (2007). ko m á R e k & ko m á R k o v á (2003) give a comprehensive summary of the nomenclature changes, phenotypic plasticity and historic distribution record to 2002. ko m á R e k & ko m á R k o v á (2003) note the first European record was by SKUJA in his 1937 documentation of Greek and middle Asian algae. -
Prospecting the First Culture Collection of Algae
Rev. Bras. Eng. Pesca (2018) 11 (2): 2018 DOI ARTIGO REVISTA BRASILEIRA DE ENGENHARIA DE PESCA PROSPECTING THE FIRST CULTURE COLLECTION OF ALGAE FROM THE PERNAMBUCO SEMIARID, BRAZIL PROSPECÇÃO DO PRIMEIRO BANCO DE CEPAS ALGAIS DO SEMIÁRIDO PERNAMBUCANO, BRASIL Carlos Yure Barbosa de OLIVEIRA1*, Ayanne Jamyres Gomes da Silva ALMEIDA1, Marília de Viveiros e SILVA1, Ivanilson de Lima SANTOS1 & Danielli Matias de Macedo DANTAS1 1 Universidade Federal Rural de Pernambuco, Unidade Acadêmica de Serra Talhada – UFRPE-UAST *E-mail: [email protected] Recebido: 05/06/ 2018 Publicado: 21/01/2019 Resumo Os organismos fitoplanctônicos Abstract Phytoplankton organisms play an desempenham um papel importante nos important role in aquatic ecosystems, mainly by ecossistemas aquáticos, principalmente por serem their primary production capacity in the food produtores primários e consequentemente a base chain. The present study aimed at making a da cadeia alimentar. O presente trabalho objetivou commented list and isolating species from the isolar e comentar as espécies das comunidades native phytoplankton communities of four fitoplanctônicas nativas de quatro reservatórios no reservoirs in Pernambuco’s semiarid, making semiárido pernambucano, disponibilizando-os them available for experiments that can evaluate para experimentos que possam avaliar o potencial the biotechnological potential and meet the biotecnológico e suprir as demandas da região. As region’s demands. The collections occurred in coletas ocorreram em corpos de água localizados water