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Atom-Feeds for Inspire
ATOM-FEEDS FOR INSPIRE - Perspectives and Solutions for INSPIRE Download Services in NRW WWU Münster Institute for Geoinformatics Heisenbergstraße 2 48149 Münster Masterthesis in Geoinformatics 1. Supervisor: Hon.-Prof. Dr. Albert Remke 2. Supervisor: Dr. Christoph Stasch Arthur Rohrbach [email protected] November 2014 I Plagiatserklärung der / des Studierenden Hiermit versichere ich, dass die vorliegende Arbeit ATOM-Feeds for INSPIRE – Perspectives and Solutions for Download Services in NRW selbstständig verfasst worden ist, dass keine anderen Quellen und Hilfsmittel als die angegebenen benutzt worden sind und dass die Stellen der Arbeit, die anderen Werken – auch elektronischen Medien – dem Wortlaut oder Sinn nach entnommen wurden, auf jeden Fall unter Angabe der Quelle als Entlehnung kenntlich gemacht worden sind. _____________________________________ (Datum, Unterschrift) Ich erkläre mich mit einem Abgleich der Arbeit mit anderen Texten zwecks Auffindung von Übereinstimmungen sowie mit einer zu diesem Zweck vorzunehmenden Speicherung der Arbeit in eine Datenbank einverstanden. _____________________________________ (Datum, Unterschrift) II Abstract One proposed solution for providing Download Services for INSPIRE is using pre- defined ATOM-Feeds. Up to now the realization of ATOM-Feeds in NRW is still at the beginning. This master thesis will investigate possible solutions in order to help developing a methodology for the implementation of pre-defined INSPIRE Download Services in NRW. Following research questions form the basis of the thesis: What implementing alternatives for automatic generation of ATOM-Feeds based on ISO metadata exist? How do the identified solutions suit in order to fulfil the requirements of NRW? In the first step required technologies are introduced, including ATOM, OpenSearch and OGC standards. -
OASIS Specification Template
Search Web Services - searchRetrieve Operation: Binding for OpenSearch Version 1.0 Committee Draft 01 30 June 2008 Specification URIs: This Version: http://docs.oasis-open.org/search-ws/june08releases/opensearch-V1.0-cd-01.doc (Authoritative) http://docs.oasis-open.org/search-ws/june08releases/opensearch-V1.0-cd-01.pdf http://docs.oasis-open.org/search-ws/june08releases/opensearch-V1.0-cd-01.html Latest Version: http://docs.oasis-open.org/search-ws/v1.0/opensearch-V1.0.doc http://docs.oasis-open.org/search-ws/v1.0/opensearch-V1.0.pdf http://docs.oasis-open.org/search-ws/v1.0/opensearch-v1.0.html Technical Committee: OASIS Search Web Services TC Chair(s): Ray Denenberg <[email protected]> Matthew Dovey <[email protected]> Editor(s): Ray Denenberg [email protected] Larry Dixson [email protected] Matthew Dovey [email protected] Janifer Gatenby [email protected] Ralph LeVan [email protected] Ashley Sanders [email protected] Rob Sanderson [email protected] Related work: This specification is related to: • Search Retrieve via URL (SRU) Abstract: This is a binding of the Search Web Services - searchRetrieve operation – Abstract Protocol Definition. This binding is the specification of openSearch. Status: This document was last revised or approved by the OASIS Search Web Services TC on the above date. The level of approval is also listed above. Check the “Latest Version” or “Latest Approved Version” location noted above for possible later revisions of this document. Technical Committee members should send comments on this specification to the Technical Committee’s email list. -
Open Search Environments: the Free Alternative to Commercial Search Services
Open Search Environments: The Free Alternative to Commercial Search Services. Adrian O’Riordan ABSTRACT Open search systems present a free and less restricted alternative to commercial search services. This paper explores the space of open search technology, looking in particular at lightweight search protocols and the issue of interoperability. A description of current protocols and formats for engineering open search applications is presented. The suitability of these technologies and issues around their adoption and operation are discussed. This open search approach is especially useful in applications involving the harvesting of resources and information integration. Principal among the technological solutions are OpenSearch, SRU, and OAI-PMH. OpenSearch and SRU realize a federated model to enable content providers and search clients communicate. Applications that use OpenSearch and SRU are presented. Connections are made with other pertinent technologies such as open-source search software and linking and syndication protocols. The deployment of these freely licensed open standards in web and digital library applications is now a genuine alternative to commercial and proprietary systems. INTRODUCTION Web search has become a prominent part of the Internet experience for millions of users. Companies such as Google and Microsoft offer comprehensive search services to users free with advertisements and sponsored links, the only reminder that these are commercial enterprises. Businesses and developers on the other hand are restricted in how they can use these search services to add search capabilities to their own websites or for developing applications with a search feature. The closed nature of the leading web search technology places barriers in the way of developers who want to incorporate search functionality into applications. -
Personalizing Voyager Using Browser Extensions
University of Kentucky UKnowledge Library Presentations University of Kentucky Libraries 5-8-2015 Personalizing Voyager Using Browser Extensions Kathryn Lybarger University of Kentucky, [email protected] Right click to open a feedback form in a new tab to let us know how this document benefits oy u. Follow this and additional works at: https://uknowledge.uky.edu/libraries_present Part of the Cataloging and Metadata Commons Repository Citation Lybarger, Kathryn, "Personalizing Voyager Using Browser Extensions" (2015). Library Presentations. 128. https://uknowledge.uky.edu/libraries_present/128 This Presentation is brought to you for free and open access by the University of Kentucky Libraries at UKnowledge. It has been accepted for inclusion in Library Presentations by an authorized administrator of UKnowledge. For more information, please contact [email protected]. Personalizing Voyager using Browser Extensions Kathryn Lybarger @zemkat ELUNA 2015 #eluna2015 May 8, 2015 Personalizing Voyager As an institution, we have a fair amount of power over how Voyager’s OPAC looks Colors and fonts Which fields are searchable What displays in search results What displays in full record view … (anything really) Must find a balance Provide good access to most of our patrons Don’t clutter the interface needlessly But how about… Personalizing for particular groups of patrons? Personalizing for staff needs? Doing so quickly? Even temporarily? Web browser extensions Custom search bars Extensions Bookmarklets User scripts Browser -
Chemdoodle Web Components: HTML5 Toolkit for Chemical Graphics, Interfaces, and Informatics Melanie C Burger1,2*
Burger. J Cheminform (2015) 7:35 DOI 10.1186/s13321-015-0085-3 REVIEW Open Access ChemDoodle Web Components: HTML5 toolkit for chemical graphics, interfaces, and informatics Melanie C Burger1,2* Abstract ChemDoodle Web Components (abbreviated CWC, iChemLabs, LLC) is a light-weight (~340 KB) JavaScript/HTML5 toolkit for chemical graphics, structure editing, interfaces, and informatics based on the proprietary ChemDoodle desktop software. The library uses <canvas> and WebGL technologies and other HTML5 features to provide solutions for creating chemistry-related applications for the web on desktop and mobile platforms. CWC can serve a broad range of scientific disciplines including crystallography, materials science, organic and inorganic chemistry, biochem- istry and chemical biology. CWC is freely available for in-house use and is open source (GPL v3) for all other uses. Keywords: ChemDoodle Web Components, Chemical graphics, Animations, Cheminformatics, HTML5, Canvas, JavaScript, WebGL, Structure editor, Structure query Introduction Mobile browsers did support HTML5, which opened How we communicate chemical information is increas- the door to web applications built with only HTML, ingly technology driven. Learning management systems, CSS and JavaScript (JS), such as the ChemDoodle Web virtual classrooms and MOOCs are a few examples where Components. chemistry educators need forward compatible tools for digital natives. Companies that implement emerg- Review ing web technologies can find efficiencies and benefit The ChemDoodle Web Components technology stack from competitive advantages. The first chemical graph- and features ics toolkit for the web, MDL Chime, was introduced in The ChemDoodle Web Components library, released in 1996 [1]. Based on the molecular visualization program 2009, is the first chemistry toolkit for structure viewing RasMol, Chime was developed as a plugin for Netscape and editing that is originally built using only web stand- and later for Internet Explorer and Firefox. -
Reading, Discovering, Sharing Ebooks
Reading Discovering Sharing Reading, Discovering, Sharing eBooks Sayamindu Dasgupta One Laptop Per Child FOSS.IN 2009 Sayamindu Dasgupta Reading, Discovering, Sharing eBooks Reading A Brief History & Current Status Discovering The EPUB standard Sharing EPUB Readers A Brief History Can be traced back to 1971 (Project Gutenberg) Considered a niche area/product till recent times Major pain points Multiple formats, some proprietary, some not Lack of specialized devices Display (mostly resolution related) issues Sayamindu Dasgupta Reading, Discovering, Sharing eBooks Reading A Brief History & Current Status Discovering The EPUB standard Sharing EPUB Readers A Brief History Can be traced back to 1971 (Project Gutenberg) Considered a niche area/product till recent times Major pain points Multiple formats, some proprietary, some not Lack of specialized devices Display (mostly resolution related) issues Sayamindu Dasgupta Reading, Discovering, Sharing eBooks Reading A Brief History & Current Status Discovering The EPUB standard Sharing EPUB Readers A Brief History Can be traced back to 1971 (Project Gutenberg) Considered a niche area/product till recent times Major pain points Multiple formats, some proprietary, some not Lack of specialized devices Display (mostly resolution related) issues Sayamindu Dasgupta Reading, Discovering, Sharing eBooks Reading A Brief History & Current Status Discovering The EPUB standard Sharing EPUB Readers A Brief History Can be traced back to 1971 (Project Gutenberg) Considered a niche area/product till recent times -
Titelei 1..30
Johann Gasteiger, Thomas Engel (Eds.) Chemoinformatics Chemoinformatics: A Textbook. Edited by Johann Gasteiger and Thomas Engel Copyright 2003 Wiley-VCH Verlag GmbH & Co. KGaA. ISBN: 3-527-30681-1 Related Titles from WILEY-VCH Hans-Dieter HoÈltje, Wolfgang Sippl, Didier Rognan, Gerd Folkers Molecular Modeling 2003 ISBN 3-527-30589-0 Helmut GuÈnzler, Hans-Ulrich Gremlich IR Spectroscopy An Introduction 2002 ISBN 3-527-28896-1 Jure Zupan, Johann Gasteiger Neural Networks in Chemistry and Drug Design An Introduction 1999 ISBN 3-527-29778-2 (HC) ISBN 3-527-29779-0 (SC) Siegmar Braun, Hans-Otto Kalinowski, Stefan Berger 150 and More Basic NMR Experiments A Practical Course 1998 ISBN 3-527-29512-7 Johann Gasteiger, Thomas Engel (Eds.) Chemoinformatics A Textbook Editors: This book was carefully produced. Never- theless, editors, authors and publisher do Prof. Dr. Johann Gasteiger not warrant the information contained Computer-Chemie-Centrum and Institute therein to be free of errors. Readers are ofOrganic Chemistry advised to keep in mind that statements, University ofErlangen-NuÈrnberg data, illustrations, procedural details or NaÈgelsbachstraûe 25 other items may inadvertently be inaccurate. 91052 Erlangen Germany Library of Congress Card No.: applied for A catalogue record for this book is available from the British Library. Dr. Thomas Engel Computer-Chemie-Centrum and Institute Bibliographic information published by ofOrganic Chemistry Die Deutsche Bibliothek University ofErlangen-NuÈrnberg Die Deutsche Bibliothek lists this publica- NaÈgelsbachstraûe 25 tion in the Deutsche Nationalbibliografie; 91052 Erlangen detailed bibliographic data is available in the Germany Internet at http://dnb.ddb.de ISBN 3-527-30681-1 c 2003 WILEY-VCH Verlag GmbH & Co. -
History Contents
RSS - Wikipedia, the free encyclopedia Page 1 of 6 RSS From Wikipedia, the free encyclopedia (Redirected from RSS feeds) RSS (most commonly expanded as Really Simple RSS Syndication ) is a family of web feed formats used to publish frequently updated works—such as blog entries, news headlines, audio, and video—in a standardized format. [2] An RSS document (which is called a "feed", "web feed", [3] or "channel") includes full or summarized text, plus metadata such as publishing dates and authorship. Web feeds benefit publishers by letting them syndicate content automatically. They benefit readers who want to subscribe to timely updates The RSS logo from favored websites or to aggregate feeds from many sites into one place. RSS feeds can be read Filename .rss, .xml using software called an "RSS reader", "feed extension reader", or "aggregator", which can be web-based, application/rss+xml desktop-based, or mobile-device-based. A Internet standardized XML file format allows the media type (Registration Being information to be published once and viewed by Prepared) [1] many different programs. The user subscribes to a feed by entering into the reader the feed's URI or Type of Web syndication by clicking an RSS icon in a web browser that format initiates the subscription process. The RSS reader Extended XML checks the user's subscribed feeds regularly for from new work, downloads any updates that it finds, and provides a user interface to monitor and read the feeds. RSS formats are specified using XML, a generic specification for the creation of data formats. Although RSS formats have evolved from as early as March 1999, [4] it was between 2005 and 2006 when RSS gained widespread use, and the (" ") icon was decided upon by several major Web browsers. -
Drug Discovery Informatics Registration Systems and Underlying Toolkits (Appendices 1 and 2) 271 Subject Appendices
SUBJECT APPENDICES DRUG DISCOVERY INFORMATICS REGISTRATION SYSTEMS AND UNDERLYING TOOLKITS (APPENDICES 1 AND 2) Appendix 1: DRUG, MOLECULAR REGISTRATION SYSTEMS, AND CHEMISTRY DATA CARTRIDGES Product Company Page Website Isentris, MDL- MDL 171 http://www.mdli.com Base, ISIS- Base ChemOffice Cambridgesoft 73 http://www.cambridgesoft.com Cambridgesoft CambridgeSoft 73 http://www.cambridgesoft.com/solutions/ Enterprise Solutions ActivityBase IDBS 152 http://www.idbs.com/products/abase/ Accord Accelrys 51 http://www.accelrys.com AUSPYX Tripos 261 http://www.tripos.com CBIS ChemInnovation 103 http://www.cheminnovation.com/ (Chemical and Software Biological Informatics Systems) ACD/SpecDB ACD Labs 59 http://www.acdlabs.com (Spectral Data Management System) - Analytical data capture tools Super Package BioByte 71 http://www.biobyte.com/index.html /THOR (Daylight) JChem ChemAxon 89 http://www.chemaxon.com Cartridge Software for Infochem 156 http://www.infochem.de/en/company/ Chemical index.shtml databases and chemical data processes 271 272 CHEMOINFORMATICS The InfoChem Infochem 156 http://www.infochem.de/eng/index.htm Chemistry Cartridge for Oracle Molecular Collaborative 115 http://www.collaborativedrug.com/ Databank Drug Discovery DayCart Daylight 123 http://www.daylight.com/ Chemical Information Systems, Inc. CHED, TimTec 254 http://software.timtec.net/ Chemdbsoft MDL Isentris MDL 171 http://www.mdli.com platform (ISIS Base), ChemBio AE, AssayExplorer Appendix 2: CHEMOINFORMATICS TOOLKITS TO DEVELOP APPLICATIONS Product Company Page Website -
Pipenightdreams Osgcal-Doc Mumudvb Mpg123-Alsa Tbb
pipenightdreams osgcal-doc mumudvb mpg123-alsa tbb-examples libgammu4-dbg gcc-4.1-doc snort-rules-default davical cutmp3 libevolution5.0-cil aspell-am python-gobject-doc openoffice.org-l10n-mn libc6-xen xserver-xorg trophy-data t38modem pioneers-console libnb-platform10-java libgtkglext1-ruby libboost-wave1.39-dev drgenius bfbtester libchromexvmcpro1 isdnutils-xtools ubuntuone-client openoffice.org2-math openoffice.org-l10n-lt lsb-cxx-ia32 kdeartwork-emoticons-kde4 wmpuzzle trafshow python-plplot lx-gdb link-monitor-applet libscm-dev liblog-agent-logger-perl libccrtp-doc libclass-throwable-perl kde-i18n-csb jack-jconv hamradio-menus coinor-libvol-doc msx-emulator bitbake nabi language-pack-gnome-zh libpaperg popularity-contest xracer-tools xfont-nexus opendrim-lmp-baseserver libvorbisfile-ruby liblinebreak-doc libgfcui-2.0-0c2a-dbg libblacs-mpi-dev dict-freedict-spa-eng blender-ogrexml aspell-da x11-apps openoffice.org-l10n-lv openoffice.org-l10n-nl pnmtopng libodbcinstq1 libhsqldb-java-doc libmono-addins-gui0.2-cil sg3-utils linux-backports-modules-alsa-2.6.31-19-generic yorick-yeti-gsl python-pymssql plasma-widget-cpuload mcpp gpsim-lcd cl-csv libhtml-clean-perl asterisk-dbg apt-dater-dbg libgnome-mag1-dev language-pack-gnome-yo python-crypto svn-autoreleasedeb sugar-terminal-activity mii-diag maria-doc libplexus-component-api-java-doc libhugs-hgl-bundled libchipcard-libgwenhywfar47-plugins libghc6-random-dev freefem3d ezmlm cakephp-scripts aspell-ar ara-byte not+sparc openoffice.org-l10n-nn linux-backports-modules-karmic-generic-pae -
Bringing Molecular Dynamics Simulation Data Into View
Opinion Bringing Molecular Dynamics Simulation Data into View Peter W. Hildebrand,1,2,3,* Alexander S. Rose,4,@ and Johanna K.S. Tiemann1,@ Molecular dynamics (MD) simulations monitor time-resolved motions of macromolecules. While Highlights visualization of MD trajectories allows an instant and intuitive understanding of dynamics and MD simulations have become function, so far mainly static representations are provided in the published literature. Recent ad- routinely used over the past years vances in browser technology may allow for the sharing of trajectories through interactive visu- to investigate dynamic motions of alization on the web. We believe that providing intuitive and interactive visualization, along with macromolecules at the atomic related protocols and analysis data, promotes understanding, reliability, and reusability of MD level. simulations. Existing barriers for sharing MD simulations are discussed and emerging solutions Interactive visualization of MD tra- are highlighted. We predict that interactive visualization of MD trajectories will quickly be adop- jectories may provide an instant, ted by researchers, research consortiums, journals, and funding agencies to gather and transparent, and intuitive under- distribute results from MD simulations via the web. standing of complex dynamics. Dynamics Leads to Understanding Macromolecule Function Sharing of MD trajectories may generate transparency and trust, Molecular dynamics (MD,seeGlossary) simulations are a well-established technique to investigate allowing collaboration, knowledge time-resolved motions of biological macromolecules at atomic resolution [1,2]. Traditionally, macro- exchange, and data reuse. molecules such as enzymes, channels, transporters, or receptors have been perceived as being rigid entities mainly because structures obtained by X-ray crystallography are fixed in crystal lattices and Recent technological de- are therefore resolved as single, static snapshots. -
Searchretrieve: Part 4. APD Binding for Opensearch Version 1.0 OASIS Standard 30 January 2013
searchRetrieve: Part 4. APD Binding for OpenSearch Version 1.0 OASIS Standard 30 January 2013 Specification URIs This version: http://docs.oasis-open.org/search-ws/searchRetrieve/v1.0/os/part4-opensearch/searchRetrieve- v1.0-os-part4-opensearch.doc (Authoritative) http://docs.oasis-open.org/search-ws/searchRetrieve/v1.0/os/part4-opensearch/searchRetrieve- v1.0-os-part4-opensearch.html http://docs.oasis-open.org/search-ws/searchRetrieve/v1.0/os/part4-opensearch/searchRetrieve- v1.0-os-part4-opensearch.pdf Previous version: N/A Latest version: http://docs.oasis-open.org/search-ws/searchRetrieve/v1.0/searchRetrieve-v1.0-part4- opensearch.doc (Authoritative) http://docs.oasis-open.org/search-ws/searchRetrieve/v1.0/searchRetrieve-v1.0-part4- opensearch.html http://docs.oasis-open.org/search-ws/searchRetrieve/v1.0/searchRetrieve-v1.0-part4- opensearch.pdf Technical Committee: OASIS Search Web Services TC Chairs: Ray Denenberg ([email protected]), Library of Congress Matthew Dovey ([email protected]), JISC Executive, University of Bristol Editors: Ray Denenberg ([email protected]), Library of Congress Larry Dixson ([email protected]), Library of Congress Ralph Levan ([email protected]), OCLC Janifer Gatenby ([email protected]), OCLC Tony Hammond ([email protected]), Nature Publishing Group Matthew Dovey ([email protected]), JISC Executive, University of Bristol Additional artifacts: This prose specification is one component of a Work Product which also includes: XML schemas: http://docs.oasis-open.org/search-ws/searchRetrieve/v1.0/os/schemas/ searchRetrieve: Part 0. Overview Version 1.0. http://docs.oasis-open.org/search-ws/searchRetrieve/v1.0/os/part0-overview/searchRetrieve- v1.0-os-part0-overview.html searchRetrieve: Part 1.