Recent Supercomputing Development in Japan
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User's Manual
Management Number:OUCMC-super-技術-007-06 National University Corporation Osaka University Cybermedia Center User's manual NEC First Government & Public Solutions Division Summary 1. System Overview ................................................................................................. 1 1.1. Overall System View ....................................................................................... 1 1.2. Thress types of Computiong Environments ........................................................ 2 1.2.1. General-purpose CPU environment .............................................................. 2 1.2.2. Vector computing environment ................................................................... 3 1.2.3. GPGPU computing environment .................................................................. 5 1.3. Three types of Storage Areas ........................................................................... 6 1.3.1. Features.................................................................................................. 6 1.3.2. Various Data Access Methods ..................................................................... 6 1.4. Three types of Front-end nodes ....................................................................... 7 1.4.1. Features.................................................................................................. 7 1.4.2. HPC Front-end ......................................................................................... 7 1.4.1. HPDA Front-end ...................................................................................... -
Xinya (Leah) Zhao Abdulahi Abu Outline
K-Computer Xinya (Leah) Zhao Abdulahi Abu Outline • History of Supercomputing • K-Computer Architecture • Programming Environment • Performance Evaluation • What's next? Timeline of Supercomputing Control Data The Cray era Massive Processing Petaflop Computing Corporation (1960s) (mid-1970s - 1980s) (1990s) (21st century) • CDC 1604 (1960): First • 80 MHz Cray-1 (1976): • Hitachi SR2201 (1996): • Realization: Power of solid state The most successful used 2048 processors large number of small • CDC 6600 (1964): 100 supercomputers in history connected via a fast three processors can be computers were sold at $8 • Vector processor dimensioanl corssbar harnessed to achieve high million each • Introduced chaining in network performance • Gained speed by "farming which scalar and vector • ASCI Red: mesh-based • IBM Blue Gene out" work to peripheral registers generate interim MIMD massively parallel architecture: trades computing elements, results system with over 9,000 processor speed for low freeing the CPU to • The Cray-2 (1985): No compute nodes and well power consumption, so a process actual data chaning and high memory over 12 terabytes of disk large number of • STAR-100: First to use latency with deep storage processors can be used at vector processing pipelinging • ASCI Red was the first air cooled temperature ever to break through the • K computer (2011) : 1 teraflop barrier fastest in the world K Computer is #1 !!! Why K Computer? Purpose: • Perform extremely complex mathematical or scientific calculations (ex: modelling the changes -
(52) Cont~Ol Data
C) (52) CONT~OL DATA literature and Distribution Services ~~.) 308 North Dale Street I st. Paul. Minnesota 55103 rJ 1 August 29, 1983 "r--"-....." (I ~ __ ,I Dear Customer: Attached is the third (3) catalog supplement since the 1938 catalog was published . .. .·Af ~ ~>J if-?/t~--62--- G. F. Moore, Manager Literature & Distribution Services ,~-" l)""... ...... I _._---------_._----_._----_._-------- - _......... __ ._.- - LOS CATALOG SUPPLEPtENT -- AUGUST 1988 Pub No. Rev [Page] TITLE' [ extracted from catalog entry] Bind Price + = New Publication r = Revision - = Obsolete r 15190060 [4-07] FULL SCREEN EDITOR (FSEDIT) RM (NOS 1 & 2) .......•...•.•...•••........... 12.00 r 15190118 K [4-07] NETWORK JOB ENTRY FACILITY (NJEF) IH8 (NOS 2) ........................... 5.00 r 15190129 F [4-07] NETWORK JOB ENTRY FACILITY (NJEF) RM (NOS 2) .........•.......•........... + 15190150 C [4-07] NETWORK TRANSFER FACILITY (NTF) USAGE (NOS/VE) .......................... 15.00 r 15190762 [4-07] TIELINE/NP V2 IHB (L642) (NOS 2) ........................................ 12.00 r 20489200 o [4-29] WREN II HALF-HEIGHT 5-114" DISK DRIVE ................................... + 20493400 [4-20] CDCNET DEVICE INTERFACE UNITS ........................................... + 20493600 [4-20] CDCNET ETHERNET EQUIPMENT ............................................... r 20523200 B [4-14] COMPUTER MAINTENANCE SERVICES - DEC ..................................... r 20535300 A [4-29] WREN II 5-1/4" RLL CERTIFIED ............................................ r 20537300 A [4-18] SOFTWARE -
DMI-HIRLAM on the NEC SX-6
DMI-HIRLAM on the NEC SX-6 Maryanne Kmit Meteorological Research Division Danish Meteorological Institute Lyngbyvej 100 DK-2100 Copenhagen Ø Denmark 11th Workshop on the Use of High Performance Computing in Meteorology 25-29 October 2004 Outline • Danish Meteorological Institute (DMI) • Applications run on NEC SX-6 cluster • The NEC SX-6 cluster and access to it • DMI-HIRLAM - geographic areas, versions, and improvements • Strategy for utilization and operation of the system DMI - the Danish Meteorological Institute DMI’s mission: • Making observations • Communicating them to the general public • Developing scientific meteorology DMI’s responsibilities: • Serving the meteorological needs of the kingdom of Denmark • Denmark, the Faroes and Greenland, including territorial waters and airspace • Predicting and monitoring weather, climate and environmental conditions, on land and at sea Applications running on the NEC SX-6 cluster Operational usage: • Long DMI-HIRLAM forecasts 4 times a day • Wave model forecasts for the North Atlantic, the Danish waters, and for the Mediterranean Sea 4 times a day • Trajectory particle model and ozone forecasts for air quality Research usage: • Global climate simulations • Regional climate simulations • Research and development of operational and climate codes Cluster interconnect GE−int Completely closed Connection to GE−ext Switch internal network institute network Switch GE GE nec1 nec2 nec3 nec4 nec5 nec6 nec7 nec8 GE GE neci1 neci2 FC 4*1Gbit/s FC links per node azusa1 asama1 FC McData FC 4*1Gbit/s FC links per azusa fiber channel switch 8*1Gbit/s FC links per asama azusa2 asama2 FC 2*1Gbit/s FC links per lun Disk#0 Disk#1 Disk#2 Disk#3 Cluster specifications • NEC SX-6 (nec[12345678]) : 64M8 (8 vector nodes with 8 CPU each) – Desc. -
UNICOS® Installation Guide for CRAY J90lm Series SG-5271 9.0.2
UNICOS® Installation Guide for CRAY J90lM Series SG-5271 9.0.2 / ' Cray Research, Inc. Copyright © 1996 Cray Research, Inc. All Rights Reserved. This manual or parts thereof may not be reproduced in any form unless permitted by contract or by written permission of Cray Research, Inc. Portions of this product may still be in development. The existence of those portions still in development is not a commitment of actual release or support by Cray Research, Inc. Cray Research, Inc. assumes no liability for any damages resulting from attempts to use any functionality or documentation not officially released and supported. If it is released, the final form and the time of official release and start of support is at the discretion of Cray Research, Inc. Autotasking, CF77, CRAY, Cray Ada, CRAYY-MP, CRAY-1, HSX, SSD, UniChem, UNICOS, and X-MP EA are federally registered trademarks and CCI, CF90, CFr, CFr2, CFT77, COS, Cray Animation Theater, CRAY C90, CRAY C90D, Cray C++ Compiling System, CrayDoc, CRAY EL, CRAY J90, Cray NQS, CraylREELlibrarian, CraySoft, CRAY T90, CRAY T3D, CrayTutor, CRAY X-MP, CRAY XMS, CRAY-2, CRInform, CRIlThrboKiva, CSIM, CVT, Delivering the power ..., DGauss, Docview, EMDS, HEXAR, lOS, LibSci, MPP Apprentice, ND Series Network Disk Array, Network Queuing Environment, Network Queuing '!boIs, OLNET, RQS, SEGLDR, SMARTE, SUPERCLUSTER, SUPERLINK, Trusted UNICOS, and UNICOS MAX are trademarks of Cray Research, Inc. Anaconda is a trademark of Archive Technology, Inc. EMASS and ER90 are trademarks of EMASS, Inc. EXABYTE is a trademark of EXABYTE Corporation. GL and OpenGL are trademarks of Silicon Graphics, Inc. -
Through the Years… When Did It All Begin?
& Through the years… When did it all begin? 1974? 1978? 1963? 2 CDC 6600 – 1974 NERSC started service with the first Supercomputer… ● A well-used system - Serial Number 1 ● On its last legs… ● Designed and built in Chippewa Falls ● Launch Date: 1963 ● Load / Store Architecture ● First RISC Computer! ● First CRT Monitor ● Freon Cooled ● State-of-the-Art Remote Access at NERSC ● Via 4 acoustic modems, manually answered capable of 10 characters /sec 3 50th Anniversary of the IBM / Cray Rivalry… Last week, CDC had a press conference during which they officially announced their 6600 system. I understand that in the laboratory developing this system there are only 32 people, “including the janitor”… Contrasting this modest effort with our vast development activities, I fail to understand why we have lost our industry leadership position by letting someone else offer the world’s most powerful computer… T.J. Watson, August 28, 1963 4 2/6/14 Cray Higher-Ed Roundtable, July 22, 2013 CDC 7600 – 1975 ● Delivered in September ● 36 Mflop Peak ● ~10 Mflop Sustained ● 10X sustained performance vs. the CDC 6600 ● Fast memory + slower core memory ● Freon cooled (again) Major Innovations § 65KW Memory § 36.4 MHz clock § Pipelined functional units 5 Cray-1 – 1978 NERSC transitions users ● Serial 6 to vector architectures ● An fairly easy transition for application writers ● LTSS was converted to run on the Cray-1 and became known as CTSS (Cray Time Sharing System) ● Freon Cooled (again) ● 2nd Cray 1 added in 1981 Major Innovations § Vector Processing § Dependency -
Cray Research Software Report
Cray Research Software Report Irene M. Qualters, Cray Research, Inc., 655F Lone Oak Drive, Eagan, Minnesota 55121 ABSTRACT: This paper describes the Cray Research Software Division status as of Spring 1995 and gives directions for future hardware and software architectures. 1 Introduction single CPU speedups that can be anticipated based on code per- formance on CRAY C90 systems: This report covers recent Supercomputer experiences with Cray Research products and lays out architectural directions for CRAY C90 Speed Speedup on CRAY T90s the future. It summarizes early customer experience with the latest CRAY T90 and CRAY J90 systems, outlines directions Under 100 MFLOPS 1.4x over the next five years, and gives specific plans for ‘95 deliv- 200 to 400 MFLOPS 1.6x eries. Over 600 MFLOPS 1.75x The price/performance of CRAY T90 systems shows sub- 2 Customer Status stantial improvements. For example, LINPACK CRAY T90 price/performance is 3.7 times better than on CRAY C90 sys- Cray Research enjoyed record volumes in 1994, expanding tems. its installed base by 20% to more than 600 systems. To accom- plish this, we shipped 40% more systems than in 1993 (our pre- CRAY T94 single CPU ratios to vious record year). This trend will continue, with similar CRAY C90 speeds: percentage increases in 1995, as we expand into new applica- tion areas, including finance, multimedia, and “real time.” • LINPACK 1000 x 1000 -> 1.75x In the face of this volume, software reliability metrics show • NAS Parallel Benchmarks (Class A) -> 1.48 to 1.67x consistent improvements. While total incoming problem re- • Perfect Benchmarks -> 1.3 to 1.7x ports showed a modest decrease in 1994, our focus on MTTI (mean time to interrupt) for our largest systems yielded a dou- bling in reliability by year end. -
The Gemini Network
The Gemini Network Rev 1.1 Cray Inc. © 2010 Cray Inc. All Rights Reserved. Unpublished Proprietary Information. This unpublished work is protected by trade secret, copyright and other laws. Except as permitted by contract or express written permission of Cray Inc., no part of this work or its content may be used, reproduced or disclosed in any form. Technical Data acquired by or for the U.S. Government, if any, is provided with Limited Rights. Use, duplication or disclosure by the U.S. Government is subject to the restrictions described in FAR 48 CFR 52.227-14 or DFARS 48 CFR 252.227-7013, as applicable. Autotasking, Cray, Cray Channels, Cray Y-MP, UNICOS and UNICOS/mk are federally registered trademarks and Active Manager, CCI, CCMT, CF77, CF90, CFT, CFT2, CFT77, ConCurrent Maintenance Tools, COS, Cray Ada, Cray Animation Theater, Cray APP, Cray Apprentice2, Cray C90, Cray C90D, Cray C++ Compiling System, Cray CF90, Cray EL, Cray Fortran Compiler, Cray J90, Cray J90se, Cray J916, Cray J932, Cray MTA, Cray MTA-2, Cray MTX, Cray NQS, Cray Research, Cray SeaStar, Cray SeaStar2, Cray SeaStar2+, Cray SHMEM, Cray S-MP, Cray SSD-T90, Cray SuperCluster, Cray SV1, Cray SV1ex, Cray SX-5, Cray SX-6, Cray T90, Cray T916, Cray T932, Cray T3D, Cray T3D MC, Cray T3D MCA, Cray T3D SC, Cray T3E, Cray Threadstorm, Cray UNICOS, Cray X1, Cray X1E, Cray X2, Cray XD1, Cray X-MP, Cray XMS, Cray XMT, Cray XR1, Cray XT, Cray XT3, Cray XT4, Cray XT5, Cray XT5h, Cray Y-MP EL, Cray-1, Cray-2, Cray-3, CrayDoc, CrayLink, Cray-MP, CrayPacs, CrayPat, CrayPort, Cray/REELlibrarian, CraySoft, CrayTutor, CRInform, CRI/TurboKiva, CSIM, CVT, Delivering the power…, Dgauss, Docview, EMDS, GigaRing, HEXAR, HSX, IOS, ISP/Superlink, LibSci, MPP Apprentice, ND Series Network Disk Array, Network Queuing Environment, Network Queuing Tools, OLNET, RapidArray, RQS, SEGLDR, SMARTE, SSD, SUPERLINK, System Maintenance and Remote Testing Environment, Trusted UNICOS, TurboKiva, UNICOS MAX, UNICOS/lc, and UNICOS/mp are trademarks of Cray Inc. -
Hardware Technology of the Earth Simulator 1
Special Issue on High Performance Computing 27 Architecture and Hardware for HPC 1 Hardware Technology of the Earth Simulator 1 By Jun INASAKA,* Rikikazu IKEDA,* Kazuhiko UMEZAWA,* 5 Ko YOSHIKAWA,* Shitaka YAMADA† and Shigemune KITAWAKI‡ 5 1-1 This paper describes the hardware technologies of the supercomputer system “The Earth Simula- 1-2 ABSTRACT tor,” which has the highest performance in the world and was developed by ESRDC (the Earth 1-3 & 2-1 Simulator Research and Development Center)/NEC. The Earth Simulator has adopted NEC’s leading edge 2-2 10 technologies such as most advanced device technology and process technology to develop a high-speed and high-10 2-3 & 3-1 integrated LSI resulting in a one-chip vector processor. By combining this LSI technology with various advanced hardware technologies including high-density packaging, high-efficiency cooling technology against high heat dissipation and high-density cabling technology for the internal node shared memory system, ESRDC/ NEC has been successful in implementing the supercomputer system with its Linpack benchmark performance 15 of 35.86TFLOPS, which is the world’s highest performance (http://www.top500.org/ : the 20th TOP500 list of the15 world’s fastest supercomputers). KEYWORDS The Earth Simulator, Supercomputer, CMOS, LSI, Memory, Packaging, Build-up Printed Wiring Board (PWB), Connector, Cooling, Cable, Power supply 20 20 1. INTRODUCTION (Main Memory Unit) package are all interconnected with the fine coaxial cables to minimize the distances The Earth Simulator has adopted NEC’s most ad- between them and maximize the system packaging vanced CMOS technologies to integrate vector and density corresponding to the high-performance sys- 25 25 parallel processing functions for realizing a super- tem. -
Performance Evaluation of the Cray X1 Distributed Shared Memory Architecture
Performance Evaluation of the Cray X1 Distributed Shared Memory Architecture Tom Dunigan Jeffrey Vetter Pat Worley Oak Ridge National Laboratory Highlights º Motivation – Current application requirements exceed contemporary computing capabilities – Cray X1 offered a ‘new’ system balance º Cray X1 Architecture Overview – Nodes architecture – Distributed shared memory interconnect – Programmer’s view º Performance Evaluation – Microbenchmarks pinpoint differences across architectures – Several applications show marked improvement ORNL/JV 2 1 ORNL is Focused on Diverse, Grand Challenge Scientific Applications SciDAC Genomes Astrophysics to Life Nanophase Materials SciDAC Climate Application characteristics vary dramatically! SciDAC Fusion SciDAC Chemistry ORNL/JV 3 Climate Case Study: CCSM Simulation Resource Projections Science drivers: regional detail / comprehensive model Machine and Data Requirements 1000 750 340.1 250 154 100 113.3 70.3 51.5 Tflops 31.9 23.4 Tbytes 14.5 10 10.6 6.6 4.8 3 2.2 1 1 dyn veg interactivestrat chem biogeochem eddy resolvcloud resolv trop chemistry Years CCSM Coupled Model Resolution Configurations: 2002/2003 2008/2009 Atmosphere 230kmL26 30kmL96 • Blue line represents total national resource dedicated Land 50km 5km to CCSM simulations and expected future growth to Ocean 100kmL40 10kmL80 meet demands of increased model complexity Sea Ice 100km 10km • Red line show s data volume generated for each Model years/day 8 8 National Resource 3 750 century simulated (dedicated TF) Storage (TB/century) 1 250 At 2002-3 scientific complexity, a century simulation required 12.5 days. ORNL/JV 4 2 Engaged in Technical Assessment of Diverse Architectures for our Applications º Cray X1 Cray X1 º IBM SP3, p655, p690 º Intel Itanium, Xeon º SGI Altix º IBM POWER5 º FPGAs IBM Federation º Planned assessments – Cray X1e – Cray X2 – Cray Red Storm – IBM BlueGene/L – Optical processors – Processors-in-memory – Multithreading – Array processors, etc. -
CRAY T90 Series IEEE Floating Point Migration Issues and Solutions
CRAY T90 Series IEEE Floating Point Migration Issues and Solutions Philip G. Garnatz, Cray Research, Inc., Eagan, Minnesota, U.S.A. ABSTRACT: Migration to the new CRAY T90 series with IEEE floating-point arith- metic presents a new challenge to applications programmers. More precision in the mantissa and less range in the exponent will likely raise some numerical differences issues. A step-by-step process will be presented to show how to isolate these numerical differences. Data files will need to be transferred and converted from a Cray format PVP system to and from a CRAY T90 series system with IEEE. New options to the assign command allow for transparent reading and writing of files from the other types of system. Introduction This paper is intended for the user services personnel and 114814 help desk staff who will be asked questions by programmers and exp mantissa users who will be moving code to the CRAY T90 series IEEE from another Cray PVP architecture. The issues and solutions Exponent sign presented here are intended to be a guide to the most frequent problems that programmers may encounter. Mantissa sign What is the numerical model? Figure2: Cray format floating-point frames and other computational entities such as workstations and New CRAY T90 series IEEE programmers might notice graphic displays. Other benefits are as follows: different answers when running on the IEEE machine than on a system with traditional Cray format floating-point arithmetic. • Greater precision. An IEEE floating-point number provides The IEEE format has the following characteristics: approximately 16 decimal digits of precision; this is about one and a half digits more precise than Cray format numbers. -
Shared-Memory Vector Systems Compared
Shared-Memory Vector Systems Compared Robert Bell, CSIRO and Guy Robinson, Arctic Region Supercomputing Center ABSTRACT: The NEC SX-5 and the Cray SV1 are the only shared-memory vector computers currently being marketed. This compares with at least five models a few years ago (J90, T90, SX-4, Fujitsu and Hitachi), with IBM, Digital, Convex, CDC and others having fallen by the wayside in the early 1990s. In this presentation, some comparisons will be made between the architecture of the survivors, and some performance comparisons will be given on benchmark and applications codes, and in areas not usually presented in comparisons, e.g. file systems, network performance, gzip speeds, compilation speeds, scalability and tools and libraries. KEYWORDS: SX-5, SV1, shared-memory, vector systems averaged 95% on the larger node, and 92% on the smaller 1. Introduction node. HPCCC The SXes are supported by data storage systems – The Bureau of Meteorology and CSIRO in Australia SAM-FS for the Bureau, and DMF on a Cray J90se for established the High Performance Computing and CSIRO. Communications Centre (HPCCC) in 1997, to provide ARSC larger computational facilities than either party could The mission of the Arctic Region Supercomputing acquire separately. The main initial system was an NEC Centre is to support high performance computational SX-4, which has now been replaced by two NEC SX-5s. research in science and engineering with an emphasis on The current system is a dual-node SX-5/24M with 224 high latitudes and the Arctic. ARSC provides high Gbyte of memory, and this will become an SX-5/32M performance computational, visualisation and data storage with 224 Gbyte in July 2001.