Susceptibility to Aflatoxin B1-Related Primary Hepatocellular Carcinoma in Mice and Humans
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Chuanxiong Rhizoma Compound on HIF-VEGF Pathway and Cerebral Ischemia-Reperfusion Injury’S Biological Network Based on Systematic Pharmacology
ORIGINAL RESEARCH published: 25 June 2021 doi: 10.3389/fphar.2021.601846 Exploring the Regulatory Mechanism of Hedysarum Multijugum Maxim.-Chuanxiong Rhizoma Compound on HIF-VEGF Pathway and Cerebral Ischemia-Reperfusion Injury’s Biological Network Based on Systematic Pharmacology Kailin Yang 1†, Liuting Zeng 1†, Anqi Ge 2†, Yi Chen 1†, Shanshan Wang 1†, Xiaofei Zhu 1,3† and Jinwen Ge 1,4* Edited by: 1 Takashi Sato, Key Laboratory of Hunan Province for Integrated Traditional Chinese and Western Medicine on Prevention and Treatment of 2 Tokyo University of Pharmacy and Life Cardio-Cerebral Diseases, Hunan University of Chinese Medicine, Changsha, China, Galactophore Department, The First 3 Sciences, Japan Hospital of Hunan University of Chinese Medicine, Changsha, China, School of Graduate, Central South University, Changsha, China, 4Shaoyang University, Shaoyang, China Reviewed by: Hui Zhao, Capital Medical University, China Background: Clinical research found that Hedysarum Multijugum Maxim.-Chuanxiong Maria Luisa Del Moral, fi University of Jaén, Spain Rhizoma Compound (HCC) has de nite curative effect on cerebral ischemic diseases, *Correspondence: such as ischemic stroke and cerebral ischemia-reperfusion injury (CIR). However, its Jinwen Ge mechanism for treating cerebral ischemia is still not fully explained. [email protected] †These authors share first authorship Methods: The traditional Chinese medicine related database were utilized to obtain the components of HCC. The Pharmmapper were used to predict HCC’s potential targets. Specialty section: The CIR genes were obtained from Genecards and OMIM and the protein-protein This article was submitted to interaction (PPI) data of HCC’s targets and IS genes were obtained from String Ethnopharmacology, a section of the journal database. -
Identification of Genes Involved in Radioresistance of Nasopharyngeal Carcinoma by Integrating Gene Ontology and Protein-Protein Interaction Networks
INTERNATIONAL JOURNAL OF ONCOLOGY 40: 85-92, 2012 Identification of genes involved in radioresistance of nasopharyngeal carcinoma by integrating gene ontology and protein-protein interaction networks YA GUO1, XIAO-DONG ZHU1, SONG QU1, LING LI1, FANG SU1, YE LI1, SHI-TING HUANG1 and DAN-RONG LI2 1Department of Radiation Oncology, Cancer Hospital of Guangxi Medical University, Cancer Institute of Guangxi Zhuang Autonomous Region; 2Guang xi Medical Scientific Research Center, Guangxi Medical University, Nanning 530021, P.R. China Received June 15, 2011; Accepted July 29, 2011 DOI: 10.3892/ijo.2011.1172 Abstract. Radioresistance remains one of the important factors become potential biomarkers for predicting NPC response to in relapse and metastasis of nasopharyngeal carcinoma. Thus, it radiotherapy. is imperative to identify genes involved in radioresistance and explore the underlying biological processes in the development Introduction of radioresistance. In this study, we used cDNA microarrays to select differential genes between radioresistant CNE-2R Nasopharyngeal carcinoma (NPC) is a major malignant tumor and parental CNE-2 cell lines. One hundred and eighty-three of the head and neck region and is endemic to Southeast significantly differentially expressed genes (p<0.05) were Asia, especially Guangdong and Guangxi Provinces, and the identified, of which 138 genes were upregulated and 45 genes Mediterranean basin (1,3). Radiotherapy is the major treatment were downregulated in CNE-2R. We further employed publicly modality for nasopharyngeal carcinoma (NPC). However, in available bioinformatics related software, such as GOEAST some cases, it is radioresistant. Although microarray methods and STRING to examine the relationship among differen- have been used to assess genes involved in radioresistance in a tially expressed genes. -
Pharmacogenetics of Carbamazepine and Valproate: Focus on Polymorphisms of Drug Metabolizing Enzymes and Transporters
pharmaceuticals Review Pharmacogenetics of Carbamazepine and Valproate: Focus on Polymorphisms of Drug Metabolizing Enzymes and Transporters Teresa Iannaccone 1, Carmine Sellitto 1,2,* , Valentina Manzo 1,2 , Francesca Colucci 1, Valentina Giudice 1 , Berenice Stefanelli 1 , Antonio Iuliano 1, Giulio Corrivetti 3 and Amelia Filippelli 1,2 1 Department of Medicine, Surgery and Dentistry “Scuola Medica Salernitana”, University of Salerno, 84081 Baronissi, Italy; [email protected] (T.I.); [email protected] (V.M.); [email protected] (F.C.); [email protected] (V.G.); [email protected] (B.S.); [email protected] (A.I.); afi[email protected] (A.F.) 2 Clinical Pharmacology and Pharmacogenetics Unit, University Hospital “San Giovanni di Dio e Ruggi d’Aragona”, 84131 Salerno, Italy 3 European Biomedical Research Institute of Salerno (EBRIS), 84125 Salerno, Italy; [email protected] * Correspondence: [email protected]; Tel.: +39-089673848 Abstract: Pharmacogenomics can identify polymorphisms in genes involved in drug pharma- cokinetics and pharmacodynamics determining differences in efficacy and safety and causing inter-individual variability in drug response. Therefore, pharmacogenomics can help clinicians in optimizing therapy based on patient’s genotype, also in psychiatric and neurological settings. Citation: Iannaccone, T.; Sellitto, C.; However, pharmacogenetic screenings for psychotropic drugs are not routinely employed in diagno- Manzo, V.; Colucci, F.; Giudice, V.; Stefanelli, B.; Iuliano, A.; Corrivetti, sis and monitoring of patients treated with mood stabilizers, such as carbamazepine and valproate, G.; Filippelli, A. Pharmacogenetics of because their benefit in clinical practice is still controversial. In this review, we summarize the current Carbamazepine and Valproate: Focus knowledge on pharmacogenetic biomarkers of these anticonvulsant drugs. -
Biological Functions of CDK5 and Potential CDK5 Targeted Clinical Treatments
www.impactjournals.com/oncotarget/ Oncotarget, 2017, Vol. 8, (No. 10), pp: 17373-17382 Review Biological functions of CDK5 and potential CDK5 targeted clinical treatments Alison Shupp1, Mathew C. Casimiro2 and Richard G. Pestell2 1 Departments of Cancer Biology, Medical Oncology, Sidney Kimmel Cancer Center, Thomas Jefferson University, Philadelphia, PA, USA 2 Pennsylvania Cancer and Regenerative Medicine Research Center, Baruch S Blumberg Institute, Doylestown, PA, USA Correspondence to: Richard G. Pestell, email: [email protected] Keywords: CDK5, cancer Received: October 22, 2016 Accepted: December 17, 2016 Published: January 06, 2017 ABSTRACT Cyclin dependent kinases are proline-directed serine/threonine protein kinases that are traditionally activated upon association with a regulatory subunit. For most CDKs, activation by a cyclin occurs through association and phosphorylation of the CDK’s T-loop. CDK5 is unusual because it is not typically activated upon binding with a cyclin and does not require T-loop phosphorylation for activation, even though it has high amino acid sequence homology with other CDKs. While it was previously thought that CDK5 only interacted with p35 or p39 and their cleaved counterparts, Recent evidence suggests that CDK5 can interact with certain cylins, amongst other proteins, which modulate CDK5 activity levels. This review discusses recent findings of molecular interactions that regulate CDK5 activity and CDK5 associated pathways that are implicated in various diseases. Also covered herein is the growing body of evidence for CDK5 in contributing to the onset and progression of tumorigenesis. INTRODUCTION the missing 32 amino acids are encoded by exon 6 [9]. Although these two groups reported conflicting data, it has Cyclin dependent kinases are proline-directed been suggested that the identified isoforms are in fact the serine/threonine protein kinases that are traditionally same protein and the variances in their data are due to activated upon association with a regulatory subunit. -
Genetic Polymorphism of GSTM1 and GSTP1 in Lung Cancer in Egypt
Genetic polymorphism of GSTM1 and GSTP1 in lung cancer in Egypt Maggie M. Ramzy, Mohei El-Din M. Solliman, Hany A. Abdel-Hafiz, Randa Salah International Journal of Collaborative Research on Internal Medicine & Public Health Vol. 3 No. 1 (January 2011) Special Issue on “Chronic Disease Epidemiology” Lead Guest Editor: Professor Dr. Raymond A. Smego Coordinating Editor: Dr. Monica Gaidhane International Journal of Collaborative Research on Internal Medicine & Public Health (IJCRIMPH) ISSN 1840-4529 | Journal Type: Open Access | Volume 3 Number 1 Journal details including published articles and guidelines for authors can be found at: http://www.iomcworld.com/ijcrimph/ To cite this Article: Ramzy MM, Solliman MEM, Abdel-Hafiz HA, Salah R. Genetic polymorphism of GSTM1 and GSTP1 in lung cancer in Egypt. International Journal of Collaborative Research on Internal Medicine & Public Health. 2011; 3:41-51. Article URL: http://iomcworld.com/ijcrimph/ijcrimph-v03-n01-05.htm Correspondence concerning this article should be addressed to Maggie M. Ramzy, Faculty of Medicine, Minia University, Egypt. EMail: [email protected] / Tel: (002)0101089090 / Fax: (002)0862342813 Paper publication: 20 February 2011 41 International Journal of Collaborative Research on Internal Medicine & Public Health Genetic polymorphism of GSTM1 and GSTP1 in lung cancer in Egypt Maggie M. Ramzy * (1), Mohei El-Din M. Solliman (2), Hany A. Abdel-Hafiz (3), Randa Salah (4) (1) Biochemistry Department, Faculty of Medicine, Minia University, Egypt (2) Division of Genetic Engineering and Biotechnology, National Research Center, Egypt (3) Division of Endocrinology, School of Medicine, University of Colorado Denver, USA (4) National Cancer Institute, Egypt * Corresponding author; Email: [email protected] ABSTRACT Background: Lung cancer (LC) is the most common cause of cancer-related mortality; it is one of the most important common diseases with complicate, multi-factorial etiology, including interactions between genetic makeup and environmental factors. -
Genetically Lowered Microsomal Epoxide Hydrolase Activity And
Author Manuscript Published OnlineFirst on June 8, 2011; DOI: 10.1158/1055-9965.EPI-10-1165 Author manuscripts have been peer reviewed and accepted for publication but have not yet been edited. Genetically lowered microsomal epoxide hydrolase activity and tobacco-related cancer in 47,000 individuals Julie Lee1,2, Morten Dahl1,2, Børge G. Nordestgaard1,2,3 1Department of Clinical Biochemistry and 2The Copenhagen General Population Study, Herlev Hospital, Copenhagen University Hospital, 3The Copenhagen City Heart Study, Bispebjerg Hospital, Copenhagen University Hospital, 1-3Faculty of Health Sciences, University of Copenhagen, Copenhagen, Denmark. Running title: EPHX1 and increased risk of tobacco-related cancer Keywords: Carcinogen-detoxifying enzymes; polymorphisms in carcinogen metabolism and cancer risk; polymorphisms in genes related to androgen and estrogen metabolism in cancer risk; microsomal epoxide hydrolase; EPHX1. 1 Word count Text only: 3330 (max 5000) Abstract: 250 (max 250) References: 38 (max 50) Figures and tables: 3 + 2 (max. 6) Supplementary figures and tables: 1 + 2 Financial support: The following sources supported this work by one grant each: The Danish Lung Foundation; The Danish Heart Association; The Capital Region of Denmark Research Foundation; Chief Physician Johan Boserup and Lise Boserup’s Fund; The Augustinus Foundation; Herlev Hospital, Copenhagen University Hospital; and The European Respiratory Society. Corresponding author: Børge G. Nordestgaard, MD, DMSc., Chief Physician, Professor. Department of Clinical Biochemistry 54M1, Herlev Hospital, Copenhagen University Hospital, Herlev Ringvej 75, DK-2730 Herlev, Denmark, Phone: +45 4488 3297. Fax: +45 4488 3311, Email: [email protected] Conflict of interest: All authors declare no conflict of interest. 1 Downloaded from cebp.aacrjournals.org on September 29, 2021. -
Anergic and Regulatory T Lymphocytes Functional and Molecular Comparison Of
Functional and Molecular Comparison of Anergic and Regulatory T Lymphocytes Birgit Knoechel, Jens Lohr, Shirley Zhu, Lisa Wong, Donglei Hu, Lara Ausubel and Abul K. Abbas This information is current as of September 29, 2021. J Immunol 2006; 176:6473-6483; ; doi: 10.4049/jimmunol.176.11.6473 http://www.jimmunol.org/content/176/11/6473 Downloaded from Supplementary http://www.jimmunol.org/content/suppl/2006/05/18/176.11.6473.DC1 Material References This article cites 54 articles, 28 of which you can access for free at: http://www.jimmunol.org/content/176/11/6473.full#ref-list-1 http://www.jimmunol.org/ Why The JI? Submit online. • Rapid Reviews! 30 days* from submission to initial decision • No Triage! Every submission reviewed by practicing scientists by guest on September 29, 2021 • Fast Publication! 4 weeks from acceptance to publication *average Subscription Information about subscribing to The Journal of Immunology is online at: http://jimmunol.org/subscription Permissions Submit copyright permission requests at: http://www.aai.org/About/Publications/JI/copyright.html Email Alerts Receive free email-alerts when new articles cite this article. Sign up at: http://jimmunol.org/alerts The Journal of Immunology is published twice each month by The American Association of Immunologists, Inc., 1451 Rockville Pike, Suite 650, Rockville, MD 20852 Copyright © 2006 by The American Association of Immunologists All rights reserved. Print ISSN: 0022-1767 Online ISSN: 1550-6606. The Journal of Immunology Functional and Molecular Comparison of Anergic and Regulatory T Lymphocytes1 Birgit Knoechel,2* Jens Lohr,2* Shirley Zhu,† Lisa Wong,† Donglei Hu,† Lara Ausubel,3* and Abul K. -
The Potential Role of the Antioxidant And
Main et al. Nutrition & Metabolism 2012, 9:35 http://www.nutritionandmetabolism.com/content/9/1/35 RESEARCH Open Access The potential role of the antioxidant and detoxification properties of glutathione in autism spectrum disorders: a systematic review and meta-analysis Penelope AE Main1,2*, Manya T Angley1, Catherine E O’Doherty1, Philip Thomas2 and Michael Fenech2 Abstract Background: Glutathione has a wide range of functions; it is an endogenous anti-oxidant and plays a key role in the maintenance of intracellular redox balance and detoxification of xenobiotics. Several studies have indicated that children with autism spectrum disorders may have altered glutathione metabolism which could play a key role in the condition. Methods: A systematic literature review and meta-analysis was conducted of studies examining metabolites, interventions and/or genes of the glutathione metabolism pathways i.e. the g-glutamyl cycle and trans-sulphuration pathway in autism spectrum disorders. Results: Thirty nine studies were included in the review comprising an in vitro study, thirty two metabolite and/or co-factor studies, six intervention studies and six studies with genetic data as well as eight studies examining enzyme activity. Conclusions: The review found evidence for the involvement of the g-glutamyl cycle and trans-sulphuration pathway in autistic disorder is sufficiently consistent, particularly with respect to the glutathione redox ratio, to warrant further investigation to determine the significance in relation to clinical outcomes. Large, well designed intervention studies that link metabolites, cofactors and genes of the g-glutamyl cycle and trans-sulphuration pathway with objective behavioural outcomes in children with autism spectrum disorders are required. -
N-Myc Regulates Expression of the Detoxifying Enzyme Glutathione Transferase GSTP1, a Marker of Poor Outcome in Neuroblastoma
Published OnlineFirst December 27, 2011; DOI: 10.1158/0008-5472.CAN-11-1885 Cancer Clinical Studies Research N-Myc Regulates Expression of the Detoxifying Enzyme Glutathione Transferase GSTP1, a Marker of Poor Outcome in Neuroblastoma Jamie I. Fletcher1, Samuele Gherardi2, Jayne Murray1, Catherine A. Burkhart1, Amanda Russell1, Emanuele Valli2, Janice Smith1, Andre Oberthuer3, Lesley J. Ashton1, Wendy B. London4, Glenn M. Marshall1, Murray D. Norris1, Giovanni Perini2, and Michelle Haber1 Abstract Amplification of the transcription factor MYCN is associated with poor outcome and a multidrug-resistant phenotype in neuroblastoma. N-Myc regulates the expression of several ATP-binding cassette (ABC) transporter genes, thus affecting global drug efflux. Because these transporters do not confer resistance to several important cytotoxic agents used to treat neuroblastoma, we explored the prognostic significance and transcriptional regulation of the phase II detoxifying enzyme, glutathione S-transferase P1 (GSTP1). Using quantitative real-time PCR, GSTP1 gene expression was assessed in a retrospective cohort of 51 patients and subsequently in a cohort of 207 prospectively accrued primary neuroblastomas. These data along with GSTP1 expression data from an independent microarray study of 251 neuroblastoma samples were correlated with established prognostic indicators and disease outcome. High levels of GSTP1 were associated with decreased event-free and overall survival in all three cohorts. Multivariable analyses, including age at diagnosis, tumor stage, and MYCN amplification status, were conducted on the two larger cohorts, independently showing the prognostic significance of GSTP1 expression levels in this setting. Mechanistic investigations revealed that GSTP1 is a direct transcriptional target of N-Myc in neuroblastoma cells. Together, our findings reveal that N-Myc regulates GSTP1 along with ABC transporters that act to control drug metabolism and efflux. -
Snps in Genes Coding for ROS Metabolism and Signalling in Association with Docetaxel Clearance
The Pharmacogenomics Journal (2010) 10, 513–523 & 2010 Macmillan Publishers Limited. All rights reserved 1470-269X/10 www.nature.com/tpj ORIGINAL ARTICLE SNPs in genes coding for ROS metabolism and signalling in association with docetaxel clearance H Edvardsen1,2, PF Brunsvig3, The dose of docetaxel is currently calculated based on body surface area 1,4 5 and does not reflect the pharmacokinetic, metabolic potential or genetic H Solvang , A Tsalenko , background of the patients. The influence of genetic variation on the 6 7 A Andersen , A-C Syvanen , clearance of docetaxel was analysed in a two-stage analysis. In step one, 583 Z Yakhini5, A-L Børresen-Dale1,2, single-nucleotide polymorphisms (SNPs) in 203 genes were genotyped on H Olsen6, S Aamdal3 and samples from 24 patients with locally advanced non-small cell lung cancer. 1,2 We found that many of the genes harbour several SNPs associated with VN Kristensen clearance of docetaxel. Most notably these were four SNPs in EGF, three SNPs 1Department of Genetics, Institute of Cancer in PRDX4 and XPC, and two SNPs in GSTA4, TGFBR2, TNFAIP2, BCL2, DPYD Research, Oslo University Hospital Radiumhospitalet, and EGFR. The multiple SNPs per gene suggested the existence of common Oslo, Norway; 2Institute of Clinical Medicine, haplotypes associated with clearance. These were confirmed with detailed 3 University of Oslo, Oslo, Norway; Cancer Clinic, haplotype analysis. On the basis of analysis of variance (ANOVA), quantitative Oslo University Hospital Radiumhospitalet, Oslo, Norway; 4Institute of -
The NRF2, Thioredoxin, and Glutathione System in Tumorigenesis and Anticancer Therapies
antioxidants Review The NRF2, Thioredoxin, and Glutathione System in Tumorigenesis and Anticancer Therapies Morana Jaganjac y , Lidija Milkovic y , Suzana Borovic Sunjic and Neven Zarkovic * Laboratory for Oxidative Stress, Division of Molecular Medicine, Rudjer Boskovic Institute, Bijenicka 54, 10000 Zagreb, Croatia; [email protected] (M.J.); [email protected] (L.M.); [email protected] (S.B.S.) * Correspondence: [email protected]; Tel.: +385-1-457-1234 These authors contributed equally to this work. y Received: 27 October 2020; Accepted: 17 November 2020; Published: 19 November 2020 Abstract: Cancer remains an elusive, highly complex disease and a global burden. Constant change by acquired mutations and metabolic reprogramming contribute to the high inter- and intratumor heterogeneity of malignant cells, their selective growth advantage, and their resistance to anticancer therapies. In the modern era of integrative biomedicine, realizing that a personalized approach could benefit therapy treatments and patients’ prognosis, we should focus on cancer-driving advantageous modifications. Namely, reactive oxygen species (ROS), known to act as regulators of cellular metabolism and growth, exhibit both negative and positive activities, as do antioxidants with potential anticancer effects. Such complexity of oxidative homeostasis is sometimes overseen in the case of studies evaluating the effects of potential anticancer antioxidants. While cancer cells often produce more ROS due to their increased growth-favoring demands, numerous conventional anticancer therapies exploit this feature to ensure selective cancer cell death triggered by excessive ROS levels, also causing serious side effects. The activation of the cellular NRF2 (nuclear factor erythroid 2 like 2) pathway and induction of cytoprotective genes accompanies an increase in ROS levels. -
Role of Metabolic Genes in Blood Arsenic Concentrations of Jamaican Children with and Without Autism Spectrum Disorder
Int. J. Environ. Res. Public Health 2014, 11, 7874-7895; doi:10.3390/ijerph110807874 OPEN ACCESS International Journal of Environmental Research and Public Health ISSN 1660-4601 www.mdpi.com/journal/ijerph Article Role of Metabolic Genes in Blood Arsenic Concentrations of Jamaican Children with and without Autism Spectrum Disorder Mohammad H. Rahbar 1,2,3,*, Maureen Samms-Vaughan 4, Jianzhong Ma 2, Jan Bressler 5, Katherine A. Loveland 6, Manouchehr Ardjomand-Hessabi 3, Aisha S. Dickerson 3, Megan L. Grove 5, Sydonnie Shakespeare-Pellington 4, Compton Beecher 7, Wayne McLaughlin 7,8 and Eric Boerwinkle 1,5 1 Division of Epidemiology, Human Genetics, and Environmental Sciences (EHGES), University of Texas School of Public Health at Houston, Houston, TX 77030, USA; E-Mail: [email protected] 2 Division of Clinical and Translational Sciences, Department of Internal Medicine, Medical School, University of Texas Health Science Center at Houston, Houston, TX 77030, USA; E-Mail: [email protected] 3 Biostatistics/Epidemiology/Research Design (BERD) Component, Center for Clinical and Translational Sciences (CCTS), University of Texas Health Science Center at Houston, Houston, Texas 77030, USA; E-Mails: [email protected] (M.A.-H.); [email protected] (A.S.D.) 4 Department of Child & Adolescent Health, The University of the West Indies (UWI), Mona Campus, Kingston 7, Jamaica; E-Mails: [email protected] (M.S.-V.); [email protected] (S.S.-P.) 5 Human Genetics Center, University of Texas School of Public