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Assessing the Permissiveness of Complex Bacterial Communities Towards Conjugal Plasmids – Development of a Novel Method

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Assessing the Permissiveness of Complex Bacterial Communities Towards Conjugal Plasmids – Development of a Novel Method Downloaded from orbit.dtu.dk on: Dec 20, 2017 Assessing the permissiveness of complex bacterial communities towards conjugal plasmids – Development of a novel method Klümper, Uli; Riber, Leise; Sannazzaro, Analia; Dechesne, Arnaud; Musovic, Sanin; Hansen, Lars H.; Sørensen, Søren J.; Smets, Barth F. Published in: 12th Symposium on Bacterial Genetics and Ecology (BAGECO 12) Publication date: 2013 Document Version Publisher's PDF, also known as Version of record Link back to DTU Orbit Citation (APA): Klümper, U., Riber, L., Sannazzaro, A., Dechesne, A., Musovic, S., Hansen, L. H., ... Smets, B. F. (2013). Assessing the permissiveness of complex bacterial communities towards conjugal plasmids – Development of a novel method. In 12th Symposium on Bacterial Genetics and Ecology (BAGECO 12): Networking and plasticity of microbial communities: The secret to success (pp. 56-57). Ljubljana, Slovenia. General rights Copyright and moral rights for the publications made accessible in the public portal are retained by the authors and/or other copyright owners and it is a condition of accessing publications that users recognise and abide by the legal requirements associated with these rights. • Users may download and print one copy of any publication from the public portal for the purpose of private study or research. • You may not further distribute the material or use it for any profit-making activity or commercial gain • You may freely distribute the URL identifying the publication in the public portal If you believe that this document breaches copyright please contact us providing details, and we will remove access to the work immediately and investigate your claim. BAGECO 12 BAGECO 13 12th Symposium on Bacterial Genetics and Ecology 13th Symposium on Bacterial Genetics and Ecology NEtwOrking and THE MICROBIAL plastiCity Of miCrobiAl CONTINUITY ACROSS commuNities: EVOLVING ECOSYSTEMS thE secrEt tO Success 14–18 June 2015 9–13 June 2013 Milan, Italy Ljubljana, Slovenia www.bageco2015.org www.bageco2013.org Scientific Programme Overview nd Sunday, 9 June 2013 monday, 10 June 2013 tuesday, 11 June 2013 wednesday, 12 June 2013 thursday, 13 June 2013 2 Thünen SympoSium 08:00 08:30–10:05 08:30–10:05 08:30–10:05 on Soil meTagenomicS Session l Session lll Session V 09:00 prokaryotic evolution microbial interactions Beneficial microbes 09:00–10:35 and horizontal gene with eukaryotic Session Vll Mining and learning transfer i hosts i microbial responses to anthropogenic impacts froM MetagenoMes and approaches to 10:00 p. 11 p. 13 p. 15 alleviate plus Workshop on Bioinformatic tools industrial exhibition & industrial exhibition & industrial exhibition & them i coffee break coffee break coffee break p. 16 10:35–12:30 10:35–12:10 10:25–12:00 industrial exhibition & december 11–13, 2013 11:00 Session l Session lll Session Vl coffee break prokaryotic evolution microbial interactions Ecophysiology 11:05–12:40 and horizontal gene with eukaryotic Session Vll transfer ii hosts ii microbial responses to Braunschweig, germany anthropogenic impacts p. 13 p. 15 12:00 and approaches to industrial exhibition & industrial exhibition & alleviate p. 11 lunch break coffee break them ii Venue industrial exhibition & 12:30–13:45 p. 16 thünen-institute of Biodiversity 13:00 lunch break round table farewell 13:10–14:45 Session lV Conference Chair 13:30–15:25 microbial community p. 15 Professor dr. Christoph C. tebbe diversity and Session ll 14:00 ecosystem function i thünen-institute of Biodiversity Sociomicrobiology and microbial community networks 14:15–18:00 ember 2013 p. 13 tour postojna Caves T 15:00 industrial exhibition & coffee break p. 12 15:15–17:00 15:25–18:30 Session IV 16:00 postersession l microbial community diversity and ecosystem function ii p. 14 17:00 17:00–18:05 17:00–20:00 Sep line: 16 Opening session postersession ll D p. 11 p. 36 18:00 p. 18 Dea T 19:00 from 19:00 welcome reception at rac ljubljana town hall from 19:30 ST p. 26 Conference dinner at b 20:00 p. 36 ljubljana Castle p. 36 www.soil-metagenomics.org a Table of Contents Organisation and Imprint ...................................................................................................................................................... 4 Welcome to BAGECO 12 in Ljubljana ..................................................................................................................................... 5 General Information .............................................................................................................................................................. 6 General Tips for Authors and Presenters .............................................................................................................................. 10 Scientific Programme Sunday, 9 June 2013 .................................................................................................................................................. 11 Monday, 10 June 2013 ............................................................................................................................................... 11 Tuesday, 11 June 2013 ............................................................................................................................................... 13 Wednesday, 12 June 2013 ......................................................................................................................................... 15 Thursday, 13 June 2013 ............................................................................................................................................. 16 Poster Presentations Monday, 10 June 2013 ............................................................................................................................................... 18 Tuesday, 11 June 2013 ............................................................................................................................................... 26 Sponsors, Exhibitors, Supporting Societies and Media Cooperations .................................................................................. 34 Plan of Exhibition Area ......................................................................................................................................................... 35 Social and Cultural Programme ............................................................................................................................................ 36 Abstracts and Index of Abstract Authors .............................................................................................................................. 37 General Terms and Conditions .............................................................................................................................................. 152 3 Organisation and Imprint Venue and Date Grand Hotel Union Executive Miklošičeva cesta 1 1000 Ljubljana (Slovenia) 9–13 June 2013 Conference Homepage www.bageco2013.org Conference Chair Ines Mandic-Mulec Department of Food Science and Technology Biotechnical Faculty University of Ljubljana Vecna pot 111 1000 Ljubljana (Slovenia) Local Organising Committee Luka Ausec Simona Leskovec Maja Borić Ines Mandic-Mulec Tjasa Danevčič Anna Oslizlo Iztok Dogša Maja Rupnik Vesna Jerman Polonca Štefanič Barbara Kraigher David Stopar International Scientific Committee Mark Bailey (Great Britain) Kornelia Smalla (Germany) Marco Bazzicalupo (Italy) Christoph Tebbe (Germany) Gabriele Berg (Austria) James Tiedje (United States) Janet Jansson (United States) Vigdis Torsvik (Norway) Amalia Karagouni (Greece) Jan Dirk van Elsas (The Netherlands) Ines Mandic-Mulec (Slovenia) Timothy M. Vogel (France) James Prosser (Great Britain) Elizabeth Wellington (Great Britain) Pascal Simonet (France) Conference Organisation Conventus Congressmanagement & Marketing GmbH Justus G. Appelt/Claudia Tonn Carl-Pulfrich-Straße 1 07745 Jena (Germany) Phone +49 (0)3641 311 63 74 Fax +49 (0)3641 311 62 43 [email protected] www.conventus.de Design/Layout Layout www.krea.tif–design.de Print www.foebo.de Circulation 350 Editor Ines Mandic-Mulec Editorial Deadline 30 May 2013 4 Welcome to BAGECO 12 in Ljubljana Dear Colleagues Recent years have brought us striking discoveries in the field of bacterial genetics and ecology that sprung from rapid advances in sequencing technologies and “omics” approaches, bioinformatics, microscopy and various analytical techniques. These advances have allowed us to gather vast amounts of data, marvel at the remarkable diversity of microbial communities, culture previously unculturable organisms and discover novel ecosystem functions. These rapid developments now call for critical evaluation of the vast knowledge obtained and for hypothesis-driven research that will lead to novel concepts and connections and will be addressed during the 12th Meeting on Bacterial Genetics and Ecology (BAGECO 12). We are pleased to welcome some of the most renowned scientists in this field to give presentations on recent advances in prokaryotic evolution and horizontal gene transfer, sociomicrobiology and microbial community networking, microbial interac- tions with eukaryotic hosts, drivers of microbial community diversity and ecological outcomes, beneficial microbes, and microbial responses to anthropogenic impacts and biotechnological advances that may alleviate them. Your abstract contributions have helped us prepare a very exciting programme encompassing 36 oral and 230 poster presen- tations and we would like to thank you
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