Microbiology of Septic Systems Microbiology of Septic Systems
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Anoxygenic Photosynthesis in Photolithotrophic Sulfur Bacteria and Their Role in Detoxication of Hydrogen Sulfide
antioxidants Review Anoxygenic Photosynthesis in Photolithotrophic Sulfur Bacteria and Their Role in Detoxication of Hydrogen Sulfide Ivan Kushkevych 1,* , Veronika Bosáková 1,2 , Monika Vítˇezová 1 and Simon K.-M. R. Rittmann 3,* 1 Department of Experimental Biology, Faculty of Science, Masaryk University, 62500 Brno, Czech Republic; [email protected] (V.B.); [email protected] (M.V.) 2 Department of Biology, Faculty of Medicine, Masaryk University, 62500 Brno, Czech Republic 3 Archaea Physiology & Biotechnology Group, Department of Functional and Evolutionary Ecology, Universität Wien, 1090 Vienna, Austria * Correspondence: [email protected] (I.K.); [email protected] (S.K.-M.R.R.); Tel.: +420-549-495-315 (I.K.); +431-427-776-513 (S.K.-M.R.R.) Abstract: Hydrogen sulfide is a toxic compound that can affect various groups of water microorgan- isms. Photolithotrophic sulfur bacteria including Chromatiaceae and Chlorobiaceae are able to convert inorganic substrate (hydrogen sulfide and carbon dioxide) into organic matter deriving energy from photosynthesis. This process takes place in the absence of molecular oxygen and is referred to as anoxygenic photosynthesis, in which exogenous electron donors are needed. These donors may be reduced sulfur compounds such as hydrogen sulfide. This paper deals with the description of this metabolic process, representatives of the above-mentioned families, and discusses the possibility using anoxygenic phototrophic microorganisms for the detoxification of toxic hydrogen sulfide. Moreover, their general characteristics, morphology, metabolism, and taxonomy are described as Citation: Kushkevych, I.; Bosáková, well as the conditions for isolation and cultivation of these microorganisms will be presented. V.; Vítˇezová,M.; Rittmann, S.K.-M.R. -
Septic Tanks, Are a Contributing Factor to Phosphorus As Well As Site Specific Conditions
Scotland’s centre of expertise for waters Practical measures for reducing phosphorus and faecal microbial loads from onsite wastewater treatment system discharges to the environment A review i Scotland’s centre of expertise for waters This document was produced by: Juliette O’Keeffe and Joseph Akunna Abertay University Bell Street, Dundee DD1 1HG and Justyna Olszewska, Alannah Bruce and Linda May Centre for Ecology & Hydrology Bush Estate Penicuik Midlothian EH26 0QB and Richard Allan Centre of Expertise for Waters (CREW) The James Hutton Institute Invergowrie Dundee DD2 5DA Research Summary Key Findings Onsite wastewater treatment systems (OWTS), the majority of local flow and load characteristics of the effluents streams, which are septic tanks, are a contributing factor to phosphorus as well as site specific conditions. With that in mind, measures and faecal microbial loads. OWTS contribute to waterbodies such as awareness raising, site planning, and maintenance failing to meet Water Framework Directive (WFD) objectives are likely to contribute to reduction of impact of OWTS on and as such, measures to improve the quality of OWTS the environment. The level of load reduction possible from discharges are required. Literature has been reviewed for measures such as awareness raising is difficult to quantify, a range of measures designed to reduce phosphorus and but it is low-cost and relatively easy to implement. Those most pathogen concentrations in effluent from OWTS. A feasibility effective for phosphorus and pathogen removal are post-tank assessment focussed on their application, effectiveness, measures that maximise physical removal, through adsorption efficiency, cost and ease of adaptation. A wide range of and filtering, and maintain good conditions for biological measures have been identified that could potentially improve breakdown of solids and predation of pathogens. -
THE CASE AGAINST Marine Mammals in Captivity Authors: Naomi A
s l a m m a y t T i M S N v I i A e G t A n i p E S r a A C a C E H n T M i THE CASE AGAINST Marine Mammals in Captivity The Humane Society of the United State s/ World Society for the Protection of Animals 2009 1 1 1 2 0 A M , n o t s o g B r o . 1 a 0 s 2 u - e a t i p s u S w , t e e r t S h t u o S 9 8 THE CASE AGAINST Marine Mammals in Captivity Authors: Naomi A. Rose, E.C.M. Parsons, and Richard Farinato, 4th edition Editors: Naomi A. Rose and Debra Firmani, 4th edition ©2009 The Humane Society of the United States and the World Society for the Protection of Animals. All rights reserved. ©2008 The HSUS. All rights reserved. Printed on recycled paper, acid free and elemental chlorine free, with soy-based ink. Cover: ©iStockphoto.com/Ying Ying Wong Overview n the debate over marine mammals in captivity, the of the natural environment. The truth is that marine mammals have evolved physically and behaviorally to survive these rigors. public display industry maintains that marine mammal For example, nearly every kind of marine mammal, from sea lion Iexhibits serve a valuable conservation function, people to dolphin, travels large distances daily in a search for food. In learn important information from seeing live animals, and captivity, natural feeding and foraging patterns are completely lost. -
INVESTIGATION of ANAEROBIC PROCESSES in SEPTIC TANK AS a WASTEWATER TREATMENT OPTION Odenigbo C
International Journal of Civil Engineering, Construction and Estate Management Vol.6, No.1, pp.22-25, May 2018 ___Published by European Centre for Research Training and Development UK (www.eajournals.org) INVESTIGATION OF ANAEROBIC PROCESSES IN SEPTIC TANK AS A WASTEWATER TREATMENT OPTION Odenigbo C. Department of Civil Engineering, Enugu State University of Science and Technology ABSTRACT: This study aims to find out the anaerobic processes in septic tank as a wastewater treatment plant. Samples were collected from both a septic tank and soakaway pit. Thus, after the collection of samples from the location, waste water analysis was conducted on the two water samples A and B respectively. The results obtained on the water samples showed that sample A under physical analysis using thermometer, pH meter, conductivity meter etc, has a higher physical characteristics value according to table 4.1, than that of sample B. more also from the chemical analysis seen in table 4.1 sample A has a higher BOD, COD and DO values more than that of sample B. Therefore this suggests that biological treatment processes was efficient in that septic tank and as such waste water discharged to the environment, will be harmless to the inhabitants in that environment. KEYWORDS: Anaerobic, Septic Tank, Sewage, Treatment. INTRODUCTION Human waste or more technically referred to as Excrets, which is made up of a solid matter, faeces and liquid matter, urine and is essentially an organic compound. The constituents making up the compound are carbon, nitrogen, phosphorus, sulphur and hydrogen. Also present are fats, carbohydrates, enzymes, proteins, trace elements, pathogens and many different bacteria. -
Marine Microplankton Ecology Reading
Marine Microplankton Ecology Reading Microbes dominate our planet, especially the Earth’s oceans. The distinguishing feature of microorganisms is their small size, usually defined as less than 200 micrometers (µm); they are all invisible to the naked eye. As a group, sea microbes are extremely diverse, and extremely versatile with respect to their abilities to make and eat food. All marine microbes are too small to swim against the current and are therefore classified as plankton. First we will discuss several ways to classify marine microbes. 1. Size Planktonic marine organisms can be divided into the following size categories: Category Size femtoplankton <0.2 µm picoplankton 0.2-2 µm nanoplankton 2-20 µm microplankton 20-200 µm mesoplankton 200-2000 µm In this laboratory we are concerned with the microscopic portion of the plankton, less than 200 µm. These organisms are not visible to the naked eye (Figure 1). Figure 1. Size classes of marine plankton 2. Type A. Viruses Viruses are the smallest and simplest microplankton. They range from 0.01 to 0.3 um in diameter. Externally, viruses have a capsid, or protein coat. Viruses can also have simple or complex external morphologies with tail fibers and structures that are used to inject DNA or RNA into their host. Viruses have little internal morphology. They do not have a nucleus or organelles. They do not have chlorophyll. Inside a virus there is only nucleic acid, either DNA or RNA. Viruses do not grow and have no metabolism. Marine viruses are highly abundant. There are up to 10 billion in one liter of seawater! B. -
Human Microbiome: Your Body Is an Ecosystem
Human Microbiome: Your Body Is an Ecosystem This StepRead is based on an article provided by the American Museum of Natural History. What Is an Ecosystem? An ecosystem is a community of living things. The living things in an ecosystem interact with each other and with the non-living things around them. One example of an ecosystem is a forest. Every forest has a mix of living things, like plants and animals, and non-living things, like air, sunlight, rocks, and water. The mix of living and non-living things in each forest is unique. It is different from the mix of living and non-living things in any other ecosystem. You Are an Ecosystem The human body is also an ecosystem. There are trillions tiny organisms living in and on it. These organisms are known as microbes and include bacteria, viruses, and fungi. There are more of them living on just your skin right now than there are people on Earth. And there are a thousand times more than that in your gut! All the microbes in and on the human body form communities. The human body is an ecosystem. It is home to trillions of microbes. These communities are part of the ecosystem of the human Photo Credit: Gaby D’Alessandro/AMNH body. Together, all of these communities are known as the human microbiome. No two human microbiomes are the same. Because of this, you are a unique ecosystem. There is no other ecosystem like your body. Humans & Microbes Microbes have been around for more than 3.5 billion years. -
Properly Managing Your Septic Tank System
Properly Managing Your Septic Tank System EB1671 A conventional septic tank system has three Well Drainfield working parts: 1. The septic tank. Treatment Septic 2. The drainfield with its replacement area. Tank 3. The surrounding soil. Soil Septic Tank Drainfield Soil Groundwater Households that are not served by public sewers Replacement Area usually depend on septic tank systems to treat and dispose of wastewater. A well-designed, installed, and maintained septic system can provide years of reliable low-cost service. When these systems fail to operate effectively, property damage, groundwater and surface water pollu- tion, and disease outbreaks can occur. Therefore, it makes good sense to understand and care for The typical septic tank is a large buried rectangu- your septic tank system. lar, or cylindrical container made of concrete, fiberglass or polyethylene. Wastewater from There are many different types of septic tank your toilet, bath, kitchen, laundry, etc., flows into systems to fit a wide range of soil and site condi- the tank. Heavy solids settle to the bottom where tions. The following information will help you bacterial action partially decomposes them to understand a conventional gravity-now septic digested sludge and gases. Most of the lighter system and keep it operating safely at the lowest solids, such as fats and grease, rise to the top and possible cost. form a scum layer. COOPERATIVE EXTENSION Tank Covers Many products on the market, such as solvents, yeast, bacteria, and enzymes claim to improve septic tank performance, or reduce the need for Liquid Level routine pumping. None of them have been found Inlet Scum Layer Outlet To to work. -
Archaeal Distribution and Abundance in Water Masses of the Arctic Ocean, Pacific Sector
Vol. 69: 101–112, 2013 AQUATIC MICROBIAL ECOLOGY Published online April 30 doi: 10.3354/ame01624 Aquat Microb Ecol FREEREE ACCESSCCESS Archaeal distribution and abundance in water masses of the Arctic Ocean, Pacific sector Chie Amano-Sato1, Shohei Akiyama1, Masao Uchida2, Koji Shimada3, Motoo Utsumi1,* 1University of Tsukuba, Tennodai, Tsukuba, Ibaraki 305-8572, Japan 2National Institute for Environmental Studies, Onogawa, Tsukuba, Ibaraki 305-8506, Japan 3Tokyo University of Marine Science and Technology, Konan, Minato-ku, Tokyo 108-8477, Japan ABSTRACT: Marine planktonic Archaea have been recently recognized as an ecologically impor- tant component of marine prokaryotic biomass in the world’s oceans. Their abundance and meta- bolism are closely connected with marine geochemical cycling. We evaluated the distribution of planktonic Archaea in the Pacific sector of the Arctic Ocean using fluorescence in situ hybridiza- tion (FISH) with catalyzed reporter deposition (CARD-FISH) and performed statistical analyses using data for archaeal abundance and geochemical variables. The relative abundance of Thaum - archaeota generally increased with depth, and euryarchaeal abundance was the lowest of all planktonic prokaryotes. Multiple regression analysis showed that the thaumarchaeal relative abundance was negatively correlated with ammonium and dissolved oxygen concentrations and chlorophyll fluorescence. Canonical correspondence analysis showed that archaeal distributions differed with oceanographic water masses; in particular, Thaumarchaeota were abundant from the halocline layer to deep water, where salinity was higher and most nutrients were depleted. However, at several stations on the East Siberian Sea side of the study area and along the North- wind Ridge, Thaumarchaeota and Bacteria were proportionally very abundant at the bottom in association with higher nutrient conditions. -
About Cyanobacteria BACKGROUND Cyanobacteria Are Single-Celled Organisms That Live in Fresh, Brackish, and Marine Water
About Cyanobacteria BACKGROUND Cyanobacteria are single-celled organisms that live in fresh, brackish, and marine water. They use sunlight to make their own food. In warm, nutrient-rich environments, microscopic cyanobacteria can grow quickly, creating blooms that spread across the water’s surface and may become visible. Because of the color, texture, and location of these blooms, the common name for cyanobacteria is blue-green algae. However, cyanobacteria are related more closely to bacteria than to algae. Cyanobacteria are found worldwide, from Brazil to China, Australia to the United States. In warmer climates, these organisms can grow year-round. Scientists have called cyanobacteria the origin of plants, and have credited cyanobacteria with providing nitrogen fertilizer for rice and beans. But blooms of cyanobacteria are not always helpful. When these blooms become harmful to the environment, animals, and humans, scientists call them cyanobacterial harmful algal blooms (CyanoHABs). Freshwater CyanoHABs can use up the oxygen and block the sunlight that other organisms need to live. They also can produce powerful toxins that affect the brain and liver of animals and humans. Because of concerns about CyanoHABs, which can grow in drinking water and recreational water, the U.S. Environmental Protection Agency (EPA) has added cyanobacteria to its Drinking Water Contaminant Candidate List. This list identifies organisms and toxins that EPA considers to be priorities for investigation. ASSESSING THE IMPACT ON PUBLIC HEALTH Reports of poisonings associated with CyanoHABs date back to the late 1800s. Anecdotal evidence and data from laboratory animal research suggest that cyanobacterial toxins can cause a range of adverse human health effects, yet few studies have explored the links between CyanoHABs and human health. -
Antibiotics from Deep-Sea Microorganisms: Current Discoveries and Perspectives
marine drugs Review Antibiotics from Deep-Sea Microorganisms: Current Discoveries and Perspectives Emiliana Tortorella 1,†, Pietro Tedesco 1,2,†, Fortunato Palma Esposito 1,3,†, Grant Garren January 1,†, Renato Fani 4, Marcel Jaspars 5 and Donatella de Pascale 1,3,* 1 Institute of Protein Biochemistry, National Research Council, I-80131 Naples, Italy; [email protected] (E.T.); [email protected] (P.T.); [email protected] (F.P.E.); [email protected] (G.G.J.) 2 Laboratoire d’Ingénierie des Systèmes Biologiques et des Procédés, INSA, 31400 Toulouse, France 3 Stazione Zoologica “Anthon Dorn”, Villa Comunale, I-80121 Naples, Italy 4 Department of Biology, University of Florence, Sesto Fiorentino, I-50019 Florence, Italy; renato.fani@unifi.it 5 Marine Biodiscovery Centre, Department of Chemistry, University of Aberdeen, Aberdeen, Scotland AB24 3UE, UK; [email protected] * Correspondence: [email protected]; Tel.: +39-0816-132-314; Fax: +39-0816-132-277 † These authors equally contributed to the work. Received: 23 July 2018; Accepted: 27 September 2018; Published: 29 September 2018 Abstract: The increasing emergence of new forms of multidrug resistance among human pathogenic bacteria, coupled with the consequent increase of infectious diseases, urgently requires the discovery and development of novel antimicrobial drugs with new modes of action. Most of the antibiotics currently available on the market were obtained from terrestrial organisms or derived semisynthetically from fermentation products. The isolation of microorganisms from previously unexplored habitats may lead to the discovery of lead structures with antibiotic activity. The deep-sea environment is a unique habitat, and deep-sea microorganisms, because of their adaptation to this extreme environment, have the potential to produce novel secondary metabolites with potent biological activities. -
Bacteria Evolving: Tracing the Origins of a MRSA Epidemic
STUDENT VERSION Bacteria Evolving: Tracing the Origins of a MRSA Epidemic PASSAGE FOUR The Human Microbiome To solve the mystery of the origins of USA300, researchers looked to the microbiome that lives on human skin. They knew that within this vast, microscopic ecosystem lives a network of organisms that compete with each other, co-exist with each other and are constantly evolving. If USA300 acquired the speG gene, it was most likely from some other bacterium or organ- ism that is part of this ecosystem. And that is exactly what they found. USA300 had gotten its new abilities from another staph species, Staphylococcus epidermidis. The Source: S. epidermidis Staph epidermidis is a type of Staphylococcus that is closely re- lated to Staphylococcus aureus. Like S. aureus, S. epidermidis has adapted to live on human skin. Although it’s quite common, it usually causes no health problems. One reason that S. epider- midis can colonize human skin so effectively is that it has the ACME region, the mobile element of DNA made of 34 genes. This is the set of genes that includes the speG gene. Thanks to its genome, S. epidermidis is resistant to methicillin and related antibiotics. However, S. epidermidis rarely infects us, so the fact that it is drug resistant is usually not a problem. But what seems to have happened is that S. epidermidis bacteria were living in close contact with S. aureus bacteria on human skin and at some point S. epidermidis transfered the ACME DNA, including the speG gene, to S. aureus. This might have made it possible for S. -
Bacteria – Friend Or Foe?
Bacteria – Friend or Foe? By Rachel L. Dittmar & Rosa M. Santana Carrero [email protected], [email protected] April 2020 Danger! Sick! Gross! Vaccine! Disease! Medicine! Dirty! MRSA! Eww! E. coli! What is the first thing that comes to mind when you hear “bacteria”? Science! Microscope! MRSA! Salmonella! Hospital! Germs! Staph! Food! Small! 2 Introduction to Bacteria 3 Bacterial nomenclature • Bacteria are referred to by their genus and species, with genus coming first and species coming last: Escherichia coli Escherichia: genus Species: coli Bacteria names are ALWAYS italicized. Genus names are capitalized and species names are not. Sometimes, the genus is abbreviated by its first initial: E. coli 4 Bacteria are prokaryotes. 5 What are prokaryotes? • Plasma membrane separates the cell from its surrounding environment • Cytoplasm contains organelles • Contain DNA consisting of a single large, circular chromosome • Ribosomes make proteins 6 Prokaryotes v. Eukaryotes 7 Image from: https://www.difference.wiki/prokaryotic-cell-vs-eukaryotic-cell/ How do these organisms differ? Prokaryotes Eukaryotes - circular DNA - linear DNA (found in nucleus) - no nucleus - nucleus - no membrane bound organelles - membrane bound organelles - small- less than 10μm - larger than 10μm - unicellular - can be unicellular and multicellular 8 Bacteria are very small. 9 How big are bacteria? Bacteria are very small: 0.1 – 5.0 micrometers. A micrometer (μm) is 0.000001 meters or 0.001 millimeters (mm) For comparison, a human hair is 30 – 100 μm Image from: https://www.khanacademy.org/science/high-school-biology/hs-cells/hs-prokaryotes-and-eukaryotes/a/prokaryotic-cells 10 Bacteria are classified by phenotype or genotype.