[Puccinia Striiformis F. Sp. Tritici] on Wheat
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Revisiting the Concept of Host Range of Plant Pathogens
PY57CH04_Morris ARjats.cls July 18, 2019 12:43 Annual Review of Phytopathology Revisiting the Concept of Host Range of Plant Pathogens Cindy E. Morris and Benoît Moury Pathologie Végétale, INRA, 84140, Montfavet, France; email: [email protected] Annu. Rev. Phytopathol. 2019. 57:63–90 Keywords First published as a Review in Advance on evolutionary history, network analysis, cophylogeny, host jump, host May 13, 2019 specialization, generalism The Annual Review of Phytopathology is online at phyto.annualreviews.org Abstract https://doi.org/10.1146/annurev-phyto-082718- Strategies to manage plant disease—from use of resistant varieties to crop 100034 rotation, elimination of reservoirs, landscape planning, surveillance, quar- Annu. Rev. Phytopathol. 2019.57:63-90. Downloaded from www.annualreviews.org Copyright © 2019 by Annual Reviews. antine, risk modeling, and anticipation of disease emergences—all rely on All rights reserved knowledge of pathogen host range. However, awareness of the multitude of Access provided by b-on: Universidade de Lisboa (ULisboa) on 09/02/19. For personal use only. factors that influence the outcome of plant–microorganism interactions, the spatial and temporal dynamics of these factors, and the diversity of any given pathogen makes it increasingly challenging to define simple, all-purpose rules to circumscribe the host range of a pathogen. For bacteria, fungi, oomycetes, and viruses, we illustrate that host range is often an overlapping continuum—more so than the separation of discrete pathotypes—and that host jumps are common. By setting the mechanisms of plant–pathogen in- teractions into the scales of contemporary land use and Earth history, we propose a framework to assess the frontiers of host range for practical appli- cations and research on pathogen evolution. -
2019 Small Grains Report Southcentral and Southeast Idaho Cereals Research & Extension Program
Research Bulletin 202 January 2020 2019 Small Grains Report Southcentral and Southeast Idaho Cereals Research & Extension Program Juliet Marshall, Belayneh Yimer, Tod Shelman, Linda Jones, Suzette Arcibal, Jon Hogge, Margaret Moll, Chad Jackson and Katherine O’Brien Cover Images: Top: Wheat field in the Squirrel area outside of Ashton, Idaho. Bottom left to right: Idaho Falls Spring Nurseries, Fusarium Head Blight (Fusarium graminearum) on wheat and barley, Aphids on wheat, Hessian fly pupae on wheat, 2019 field demonstration day at Aberdeen R & E Center, Idaho, and lodged wheat field near Shelly, Idaho. Photo credit: Juliet Marshal. Southcentral and Southeastern Idaho Cereals Research and Extension Program http://www.uidaho.edu/extension/cereals/scseidaho Published and distributed by the Idaho Agricultural Experiment Station, Mark McGuire, Director, University of Idaho College of Agricultural and Life Sciences, Moscow, Idaho 83844-2337. The University of Idaho has a policy of nondiscrimination on the basis of race, color, religion, national origin, sex, sexual orientation, gender identity/expression, age, disability or status as a Vietnam-era veteran © 2020 by the University of Idaho ii ACKNOWLEDGEMENTS Idaho wheat and barley producers, through About the Authors cooperative research and extension grants from the Idaho Wheat and Barley Commissions, provided Juliet Marshall is the Cereals Cropping Systems partial funding for these small grain performance Agronomist & Pathologist with the UI SC & SE evaluations. Support was also provided by the Idaho Cereals Extension Program. University of Idaho Cooperative Extension System, Belayneh Yimer is a Postdoc/Research Support the Idaho Agricultural Experiment Station, and by fees Scientist with the UI SC & SE Idaho Cereals paid by plant breeding companies. -
Diseases of Trees in the Great Plains
United States Department of Agriculture Diseases of Trees in the Great Plains Forest Rocky Mountain General Technical Service Research Station Report RMRS-GTR-335 November 2016 Bergdahl, Aaron D.; Hill, Alison, tech. coords. 2016. Diseases of trees in the Great Plains. Gen. Tech. Rep. RMRS-GTR-335. Fort Collins, CO: U.S. Department of Agriculture, Forest Service, Rocky Mountain Research Station. 229 p. Abstract Hosts, distribution, symptoms and signs, disease cycle, and management strategies are described for 84 hardwood and 32 conifer diseases in 56 chapters. Color illustrations are provided to aid in accurate diagnosis. A glossary of technical terms and indexes to hosts and pathogens also are included. Keywords: Tree diseases, forest pathology, Great Plains, forest and tree health, windbreaks. Cover photos by: James A. Walla (top left), Laurie J. Stepanek (top right), David Leatherman (middle left), Aaron D. Bergdahl (middle right), James T. Blodgett (bottom left) and Laurie J. Stepanek (bottom right). To learn more about RMRS publications or search our online titles: www.fs.fed.us/rm/publications www.treesearch.fs.fed.us/ Background This technical report provides a guide to assist arborists, landowners, woody plant pest management specialists, foresters, and plant pathologists in the diagnosis and control of tree diseases encountered in the Great Plains. It contains 56 chapters on tree diseases prepared by 27 authors, and emphasizes disease situations as observed in the 10 states of the Great Plains: Colorado, Kansas, Montana, Nebraska, New Mexico, North Dakota, Oklahoma, South Dakota, Texas, and Wyoming. The need for an updated tree disease guide for the Great Plains has been recog- nized for some time and an account of the history of this publication is provided here. -
Stripe Rust Appears in Idaho According to Juliet Marshall with University of Idaho Extension, Stripe Rust Has Found Its Way to Western Idaho (Parma)
Forward to a friend or colleague Stripe rust appears in Idaho According to Juliet Marshall with University of Idaho Extension, stripe rust has found its way to western Idaho (Parma). Below is an image of stripe rust on UI Magic CL+ (via Oliver Neher). The growth stage of winter wheat in that area is past the window of fungicide application, and is currently in grain fill. Spring wheat is still vulnerable and susceptible varieties should be scouted for the appearance of stripe rust. In the Magic Valley and into eastern Idaho, winter wheat is heading and susceptible varieties are still vulnerable to significant yield loss associated with stripe rust infection. Stripe rust reaction of last year’s varieties in the Extension Variety Trials is reported in the 2019 Small Grains Report available online at https://www.uidaho.edu/extension/cereals/scseidaho. Please note that while some varieties were reported as resistant in 2019, race changes were reported in California by Dr. Mark Lundy (UC Davis pathologist) in this year’s crop; therefore scouting of all varieties is recommended this season. Please report observations to UI Extension in order to help tracking of the in- season spread. The weather forecast for this and especially next week is very conducive to stripe rust spread and infection. According to Xianming Chen, a research plant pathologist with the USDA Agricultural Research Service and Washington State University, wheat stripe rust has been reported in Oregon, Washington, Texas, Louisiana, Oklahoma, California, Kansas, Kentucky, Virginia, Illinois; and Idaho. Barley stripe rust has been reported in California, Oregon, and Washington. -
Status of Wheat Rust Research and Control in China
Status of wheat rust research and control in China Zhensheng Kang*, Jie Zhao, Dejun Han, Hongchang Zhang, Xiaojie Wang, Chenfang Wang, Qingmei Han, Jun Guo & Lili Huang *College of Plant Protection and Shaanxi Key Laboratory of Molecular Biology for Agriculture, Northwest A&F University, Yangling, Shaanxi 712100, P. R. China e-mail: [email protected] Abstract In China, wheat is grown on approximately 24 million hectares with an annual yield of 100 million tonnes. Stem rust, caused by Puccinia graminis f. sp. tritici, is a threat mainly to spring wheat in northeastern China. Leaf rust, caused by P. triticina, occurs on crops in the late growth stages in the Yellow-Huai-Hai River regions. Stripe rust, caused by P. striiformis f. sp. tritici (Pst), is destructive in all winter wheat regions and is considered the most important disease of wheat in China. During the last 20 years, widespread stripe rust epidemics occurred in 2002, 2003, and 2009, and localized epidemics occurred in many other years. In recent years, major yield losses were prevented by widespread and timely applications of fungicides based on accurate monitoring and prediction of disease epidemics. A total of 68 Pst races or pathotypes have been identified using a set of 19 differential wheat genotypes. At present, races CYR32 and CYR33 virulent to resistance genes Yr9, Yr3b, Yr4b, YrSu and some other resistance genes are predominant. Moreover, these races are virulent on many cultivars grown in recent years. Of 501 recent cultivars and breeding lines 71.9% were susceptible, 7.0% had effective all-stage resistance, mostly Yr26 (= Yr24), and 21.2% had adult-plant resistance. -
Monitoring Wheat Leaf Rust and Stripe Rust in Winter Wheat Using High-Resolution UAV-Based Red-Green-Blue Imagery
remote sensing Article Monitoring Wheat Leaf Rust and Stripe Rust in Winter Wheat Using High-Resolution UAV-Based Red-Green-Blue Imagery Ramin Heidarian Dehkordi 1,* , Moussa El Jarroudi 2 , Louis Kouadio 3 , Jeroen Meersmans 1 and Marco Beyer 4 1 TERRA Teaching and Research Centre, Gembloux Agro-Bio Tech, University of Liège, 5030 Gembloux, Belgium; [email protected] 2 Department of Environmental Sciences and Management, University of Liège, 6700 Arlon, Belgium; [email protected] 3 Centre for Applied Climate Sciences, University of Southern Queensland, West Street, Toowoomba, QLD 4350, Australia; [email protected] 4 Luxembourg Institute of Science and Technology, 41 Rue du Brill, L-4422 Belvaux, Luxembourg; [email protected] * Correspondence: [email protected]; Tel.: +32-81-622-189 Received: 28 September 2020; Accepted: 7 November 2020; Published: 11 November 2020 Abstract: During the past decade, imagery data acquired from unmanned aerial vehicles (UAVs), thanks to their high spatial, spectral, and temporal resolutions, have attracted increasing attention for discriminating healthy from diseased plants and monitoring the progress of such plant diseases in fields. Despite the well-documented usage of UAV-based hyperspectral remote sensing for discriminating healthy and diseased plant areas, employing red-green-blue (RGB) imagery for a similar purpose has yet to be fully investigated. This study aims at evaluating UAV-based RGB imagery to discriminate healthy plants from those infected by stripe and wheat leaf rusts in winter wheat (Triticum aestivum L.), with a focus on implementing an expert system to assist growers in improved disease management. RGB images were acquired at four representative wheat-producing sites in the Grand Duchy of Luxembourg. -
Puccinia Striiformis in Australia
COPYRIGHT AND USE OF THIS THESIS This thesis must be used in accordance with the provisions of the Copyright Act 1968. Reproduction of material protected by copyright may be an infringement of copyright and copyright owners may be entitled to take legal action against persons who infringe their copyright. Section 51 (2) of the Copyright Act permits an authorized officer of a university library or archives to provide a copy (by communication or otherwise) of an unpublished thesis kept in the library or archives, to a person who satisfies the authorized officer that he or she requires the reproduction for the purposes of research or study. The Copyright Act grants the creator of a work a number of moral rights, specifically the right of attribution, the right against false attribution and the right of integrity. You may infringe the author’s moral rights if you: - fail to acknowledge the author of this thesis if you quote sections from the work - attribute this thesis to another author - subject this thesis to derogatory treatment which may prejudice the author’s reputation For further information contact the University’s Director of Copyright Services sydney.edu.au/copyright Molecular and Host Specificity studies in Puccinia striiformis in Australia By Jordan Bailey A thesis submitted in fulfilment of the requirements for the degree of Doctor of Philosophy The University of Sydney Plant Breeding Institute May 2013 Statement of Authorship This thesis contains no material which has been accepted for the award of any other degree or diploma in any university, and to the best of my knowledge, it contains no material previously published by any other person, except where references are made in text Jordan Bailey i Acknowledgments I would like to thank the Cooperative Research Centre for National Plant Biosecurity for supporting this project and myself. -
Population Biology of Switchgrass Rust
POPULATION BIOLOGY OF SWITCHGRASS RUST (Puccinia emaculata Schw.) By GABRIELA KARINA ORQUERA DELGADO Bachelor of Science in Biotechnology Escuela Politécnica del Ejército (ESPE) Quito, Ecuador 2011 Submitted to the Faculty of the Graduate College of the Oklahoma State University in partial fulfillment of the requirements for the Degree of MASTER OF SCIENCE July, 2014 POPULATION BIOLOGY OF SWITCHGRASS RUST (Puccinia emaculata Schw.) Thesis Approved: Dr. Stephen Marek Thesis Adviser Dr. Carla Garzon Dr. Robert M. Hunger ii ACKNOWLEDGEMENTS For their guidance and support, I express sincere gratitude to my supervisor, Dr. Marek, who has supported thought my thesis with his patience and knowledge whilst allowing me the room to work in my own way. One simply could not wish for a better or friendlier supervisor. I give special thanks to M.S. Maxwell Gilley (Mississippi State University), Dr. Bing Yang (Iowa State University), Arvid Boe (South Dakota State University) and Dr. Bingyu Zhao (Virginia State), for providing switchgrass rust samples used in this study and M.S. Andrea Payne, for her assistance during my writing process. I would like to recognize Patricia Garrido and Francisco Flores for their guidance, assistance, and friendship. To my family and friends for being always the support and energy I needed to follow my dreams. iii Acknowledgements reflect the views of the author and are not endorsed by committee members or Oklahoma State University. Name: GABRIELA KARINA ORQUERA DELGADO Date of Degree: JULY, 2014 Title of Study: POPULATION BIOLOGY OF SWITCHGRASS RUST (Puccinia emaculata Schw.) Major Field: ENTOMOLOGY AND PLANT PATHOLOGY Abstract: Switchgrass (Panicum virgatum L.) is a perennial warm season grass native to a large portion of North America. -
Barley Diseases and Their Management: an Indian Perspective Om P
Wheat and Barley Research 10(3):138-150 Review Article Homepage: http://epubs.icar.org.in/ejournal/index.php/JWR Barley diseases and their management: An Indian perspective Om P. Gangwar1, Subhash C. Bhardwaj1*, Gyanendra P. Singh2, Pramod Prasad1 and Subodh Kumar1 1ICAR-Indian Institute of Wheat and Barley Research, Shimla, Himachal Pradesh, India 2ICAR-Indian Institute of Wheat and Barley Research, Karnal, India Article history Abstract Received: 09 Oct., 2018 Barley is an important coarse cereal, cultivated in Rabi season, Revised : 29 Nov., 2018 particularly in the states of Uttar Pradesh, Rajasthan, Madhya Pradesh, Accepted: 22 Dec., 2018 Bihar, Punjab, Haryana, Himachal Pradesh and Jammu & Kashmir. Currently, it covers an area of about 0.66 million hectares under rainfed and irrigated crop. Seventy per cent produce is used for cattle and poultry feed, 25% in industries for manufacturing malt and malt Citation extracts and rest 5% for human consumption. The straw is also used Gangwar OP, SC Bhardwaj, GP for animal feed, bedding and to cover roofs of houses. Barley grains Singh, P Prasad and S Kumar. demand is increasing continuously because of its various uses and high 2018. Barley disease and their management: An Indian perspective. nutritive value. Therefore, a substantial yield gains will be needed Wheat and Barley Research 10(3): over the next several decades. A number of biotic and abiotic factors 138-150. doi.org/10.25174/2249- pose a challenge to increase production of barley. Barley diseases 4065/2018/83844 prominently rusts, net blotch, spot blotch, Septoria speckled leaf blotch, stripe disease, powdery mildew, barley yellow dwarf and molya disease are the major biotic constraints in enhancing the barley grain production. -
Prediction of Disease Damage, Determination of Pathogen
PREDICTION OF DISEASE DAMAGE, DETERMINATION OF PATHOGEN SURVIVAL REGIONS, AND CHARACTERIZATION OF INTERNATIONAL COLLECTIONS OF WHEAT STRIPE RUST By DIPAK SHARMA-POUDYAL A dissertation submitted in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY WASHINGTON STATE UNIVERSITY Department of Plant Pathology MAY 2012 To the Faculty of Washington State University: The members of the Committee appointed to examine the dissertation of DIPAK SHARMA-POUDYAL find it satisfactory and recommend that it be accepted. Xianming Chen, Ph.D., Chair Dennis A. Johnson, Ph.D. Kulvinder Gill, Ph.D. Timothy D. Murray, Ph.D. ii ACKNOWLEDGEMENTS I would like to express my sincere gratitude to Dr. Xianming Chen for his invaluable guidance, moral support, and encouragement throughout the course of the study. I would like to thank Drs. Dennis A. Johnson, Kulvinder Gill, and Timothy D. Murray for serving in my committee and their valuable suggestions for my project. I also like to thank Dr. Mark Evans, Department of Statistics, for his statistical advice on model development and selection. I am grateful to Dr. Richard A. Rupp, Department of Crop and Soil Sciences, for his expert advice on using GIS techniques. I am thankful to many wheat scientists throughout the world for providing stripe rust samples. Thanks are also extended to Drs. Anmin Wan, Kent Evans, and Meinan Wang for their kind help in the stripe rust experiments. Special thanks to Dr. Deven See for allowing me to use the genotyping facilities in his lab. Suggestions on data analyses by Dr. Tobin Peever are highly appreciated. I also like to thank my fellow graduate students, especially Jeremiah Dung, Ebrahiem Babiker, Jinita Sthapit, Lydia Tymon, Renuka Attanayake, and Shyam Kandel for their help in many ways. -
Population Genetics of Phragmidium Violaceum
Population genetics of Phrugmidium violaceum Don R. Gomez B. Ag. Sc. (Hons), The University of Adelaide Thesis submitted for the degree of Doctor of Philosophy tn The University of Adelaide Discipline of Plant and Pest Science School of Agriculture and \Mine Faculty of Sciences July 2005 I dedicøte this thesis to my pørents, Rosølio and Rosølie for their untiring love ønd support Table of contents Abstract t Declaration tv Acknowledgements v Publications and conference proceedings vl Abbreviations vii Glossary of terms vul I Introduction I 2.1 Introduction 4 2.2 The weed: Rubus fruticosus tggregate 5 2.2.I History of introduction and spread 5 2.2.2 Impact on Australian environment and economy 5 2.2.3 Morphology and growth habit 6 2.2.4 Taxonomy 6 2.2.5 Distribution and ecology 8 2.2.6 Integrated weed management 10 2.3 The biocontrol agent: Phragmídium violaceum 11 2.3.7 Host specificity and mode of action 11 2.3.2 History of P. violaceum in Australia 72 2.3.3 Life history of P. violaceum 13 2.3.3.I Uredinales rust fungi and their spore states 13 2.3.3.2 Life history of P. violaceum inrelation to host phenology I6 2.3.4 Disease signs and symptoms I7 2.3.5 Disease epidemiology 18 2.3.51 Weather and climate 18 2.3.5.2 Disease impact in Australia I9 2.4 Host-pathogen interactions 2t 2.5 Population genetics of rust fungi in relation to biological control 23 2.5.1 Evolution in natural versus agricultural ecosystems 24 2.5.2 Metapopulation theory: populations within a population 25 2.5.3 Gene flow 28 2.5.4 Reproductive mode 29 2.5.5 Selection of molecular markers for population genetic studies 31 2.5.5.1 The issue of dominance 31 2.5.5.2 Isozymes and RFLPs 32 2.5.5.3 PCR-based markers JJ Arbitrarily-primed PCR 34 Sequence-tagged sites 36 2.5.6 Application of molecular markers in population studies of P. -
Rapid Global Spread of Two Aggressive Strains of a Wheat Rust Fungus
Molecular Ecology (2008) doi: 10.1111/j.1365-294X.2008.03886.x RapidBlackwell Publishing Ltd global spread of two aggressive strains of a wheat rust fungus MOGENS S. HOVMØLLER,* AMOR H. YAHYAOUI,† EUGENE A. MILUS‡ and ANNEMARIE F. JUSTESEN* *Department of Integrated Pest Management, Faculty of Agricultural Sciences, University of Aarhus, Flakkebjerg, 4200 Slagelse, Denmark, †International Center for Agricultural Development in the Dry Areas, PO Box 5466, Aleppo, Syria, ‡Department of Plant Pathology, University of Arkansas, Fayetteville, AR 72701, USA Abstract Rust fungi can overcome the effect of host resistance genes rapidly, and spores can disperse long distance by wind. Here we demonstrate a foreign incursion of similar strains of the wheat yellow rust fungus, Puccinia striiformis f. sp. tritici, in North America, Australia and Europe in less than 3 years. One strain defined by identity at 15 virulence loci and 130 amplified fragment length polymorphism (AFLP) fragments was exclusive to North America (present since 2000) and Australia (since 2002). Another strain of the same virulence phenotype, but differing in two AFLP fragments, was exclusive to Europe (present since 2000–2001) as well as Western and Central Asia and the Red Sea Area (first appearance unknown). This may be the most rapid spread of an important crop pathogen on the global scale. The limited divergence between the two strains and their derivatives, and the temporal–spatial occurrence pattern confirmed a recent spread. The data gave evidence for additional intercontinental dispersal events in the past, that is, many isolates sampled before 2000 in Europe, North America and Australia had similar AFLP fingerprints, and isolates from South Africa, which showed no divergence in AFLP, differed by only two fragments from particular isolates from Central Asia, West Asia and South Europe, respectively.