78719 Kovac's Reagent Strips (Indole Reagent Test Strips According to Kovac)

Total Page：16

File Type：pdf, Size：1020Kb

78719 Kovac's Reagent Strips (Indole Reagent Test strips according to Kovac) For determination of the ability of microorganisms, primarily Enterobacteriaceae, to split indole from the tryptophan molecule by tryptophanases. Tryptophanase present in e.g. E. coli cleaves tryptophan to indole and pyruvic acid and ammonia. p-Aminobenzaldehyde present in the reagent builds with indole a pink complex. Composition: (1 package contains 25 strips) Sterile filter paper strips impregnated with Kovac`s Reagent Kovac`s reagent is prepared by dissolving 10 g of p-aminobenzaldehyde in 150 ml of isoamylalcohol and then slowly adding 50 ml of concentrated hydrochloric acid. Directions: Indole production by the organism is observed by inserting the Kovac's Reagent Strips between the plug and inner wall of the tube, above the inoculated Peptone Water (Cat. No. 70179) and incubated at 35°C for 18-24 hours. Quality control: Cultural response after 18-24 hours at 35°C in Peptone Water (Cat. No. 70179). Pink coloration of the lower part of the strip is a positive reaction and means microorganisms possess tryptophanase activity. A negative reaction shows no color change. Test Organisms (ATCC) Indole production Escherichia coli (25922) + Enterobacter aeogenes (13048) - 1. Control 2. Escherichia coli 3. Staphylococcus aureus Page 1 of 2 References: 1. J.F. MacFaddin, Biochemical Tests for Identification of Medical Bacteria, 2nd ed., Williams and Wilkins, Baltimore (1980) 2. A.E. Greenberg, R.R. Trussell, L.S. Clesceri (Eds.), Standard Methods for the Examination of Water and Wastewater, 16th ed., A.P.H.A, Washington, D.C. (1985) Precautions and Disclaimer This product is for R&D use only, not for drug, household, or other uses. Please consult the Material Safety Data Sheet for information regarding hazards and safe handling practices. The vibrant M, Millipore, and Sigma-Aldrich are trademarks of Merck KGaA, Darmstadt, Germany or its affiliates. Detailed information on trademarks is available via publicly accessible resources. © 2018 Merck KGaA, Darmstadt, Germany and/or its affiliates. All Rights Reserved. Page 2 of 2 .

Copy Link

Recommended publications

Electrooxidation Enables Highly Regioselective Dearomative Annulation of Indole and Benzofuran Derivatives
ARTICLE https://doi.org/10.1038/s41467-019-13829-4 OPEN Electrooxidation enables highly regioselective dearomative annulation of indole and benzofuran derivatives Kun Liu1, Wenxu Song1, Yuqi Deng1, Huiyue Yang1, Chunlan Song1, Takfaoui Abdelilah1, Shengchun Wang 1, Hengjiang Cong 1, Shan Tang1 & Aiwen Lei1* 1234567890():,; The dearomatization of arenes represents a powerful synthetic methodology to provide three-dimensional chemicals of high added value. Here we report a general and practical protocol for regioselective dearomative annulation of indole and benzofuran derivatives in an electrochemical way. Under undivided electrolytic conditions, a series of highly functio- nalized five to eight-membered heterocycle-2,3-fused indolines and dihydrobenzofurans, which are typically unattainable under thermal conditions, can be successfully accessed in high yield with excellent regio- and stereo-selectivity. This transformation can also tolerate a wide range of functional groups and achieve good efficiency in large-scale synthesis under oxidant-free conditions. In addition, cyclic voltammetry, electron paramagnetic resonance (EPR) and kinetic studies indicate that the dehydrogenative dearomatization annulations arise from the anodic oxidation of indole into indole radical cation, and this process is the rate- determining step. 1 College of Chemistry and Molecular Sciences, Institute for Advanced Studies (IAS), Wuhan University, Wuhan 430072, P. R. China. *email: aiwenlei@whu. edu.cn NATURE COMMUNICATIONS | (2020) 11:3 | https://doi.org/10.1038/s41467-019-13829-4 | www.nature.com/naturecommunications 1 ARTICLE NATURE COMMUNICATIONS | https://doi.org/10.1038/s41467-019-13829-4 reaking the aromatic systems of electron-rich arenes or fused indolines (Fig. 1a)39–44. Therefore, it is highly appealing to heteroarenes provides three-dimensional chemicals of high develop efficient approaches to allow for their preparation.
[Show full text]
Heterocycles 2 Daniel Palleros
Heterocycles 2 Daniel Palleros Heterocycles 1. Structures 2. Aromaticity and Basicity 2.1 Pyrrole 2.2 Imidazole 2.3 Pyridine 2.4 Pyrimidine 2.5 Purine 3. Π-excessive and Π-deficient Heterocycles 4. Electrophilic Aromatic Substitution 5. Oxidation-Reduction 6. DNA and RNA Bases 7. Tautomers 8. H-bond Formation 9. Absorption of UV Radiation 10. Reactions and Mutations Heterocycles 3 Daniel Palleros Heterocycles Heterocycles are cyclic compounds in which one or more atoms of the ring are heteroatoms: O, N, S, P, etc. They are present in many biologically important molecules such as amino acids, nucleic acids and hormones. They are also indispensable components of pharmaceuticals and therapeutic drugs. Caffeine, sildenafil (the active ingredient in Viagra), acyclovir (an antiviral agent), clopidogrel (an antiplatelet agent) and nicotine, they all have heterocyclic systems. O CH3 N HN O O N O CH 3 N H3C N N HN N OH O S O H N N N 2 N O N N O CH3 N CH3 caffeine sildenafil acyclovir Cl S N CH3 N N H COOCH3 nicotine (S)-clopidogrel Here we will discuss the chemistry of this important group of compounds beginning with the simplest rings and continuing to more complex systems such as those present in nucleic acids. Heterocycles 4 Daniel Palleros 1. Structures Some of the most important heterocycles are shown below. Note that they have five or six-membered rings such as pyrrole and pyridine or polycyclic ring systems such as quinoline and purine. Imidazole, pyrimidine and purine play a very important role in the chemistry of nucleic acids and are highlighted.
[Show full text]
Synbiotics Alleviate the Gut Indole Load and Dysbiosis in Chronic Kidney Disease
cells Article Synbiotics Alleviate the Gut Indole Load and Dysbiosis in Chronic Kidney Disease Chih-Yu Yang 1,2,3,4 , Ting-Wen Chen 5,6 , Wan-Lun Lu 5, Shih-Shin Liang 7,8 , Hsien-Da Huang 5,†, Ching-Ping Tseng 4,5,* and Der-Cherng Tarng 1,3,4,9,* 1 Institute of Clinical Medicine, School of Medicine, National Yang-Ming University, Taipei 11221, Taiwan; [email protected] 2 Stem Cell Research Center, National Yang-Ming University, Taipei 11221, Taiwan 3 Division of Nephrology, Department of Medicine, Taipei Veterans General Hospital, Taipei 11217, Taiwan 4 Center for Intelligent Drug Systems and Smart Bio-Devices (IDS2B), Hsinchu 30010, Taiwan 5 Department of Biological Science and Technology, National Chiao Tung University, Hsinchu 30010, Taiwan; [email protected] (T.-W.C.); [email protected] (W.-L.L.); [email protected] (H.-D.H.) 6 Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsinchu 30010, Taiwan 7 Department of Biotechnology, College of Life Science, Kaohsiung Medical University, Kaohsiung 80708, Taiwan; [email protected] 8 Institute of Biomedical Science, College of Science, National Sun Yat-Sen University, Kaohsiung 80424, Taiwan 9 Department and Institute of Physiology, School of Medicine, National Yang-Ming University, Taipei 11221, Taiwan * Correspondence: [email protected] (C.-P.T.); [email protected] (D.-C.T.) † Current afﬁliation: Warshel Institute for Computational Biology, School of Life and Health Sciences, The Chinese University of Hong Kong, Longgang District, Shenzhen 518172, China. Abstract: Chronic kidney disease (CKD) has long been known to cause signiﬁcant digestive tract pathology.
[Show full text]
Organophotocatalytic Dearomatization of Indoles, Pyrroles and Benzo(Thio)Furans Via a Giese-Type Transformation
ARTICLE https://doi.org/10.1038/s42004-021-00460-y OPEN Organophotocatalytic dearomatization of indoles, pyrroles and benzo(thio)furans via a Giese-type transformation Yueteng Zhang1, Peng Ji1, Feng Gao1, Yue Dong1, He Huang2, Changqing Wang1, Ziyuan Zhou3 & ✉ Wei Wang 1 Accessing fascinating organic and biological significant indolines via dearomatization of indoles represents one of the most efficient approaches. However, it has been difficult for the dearomatization of the electron deficient indoles. Here we report the studies leading to 1234567890():,; developing a photoredox mediated Giese-type transformation strategy for the dear- omatization of the indoles. The reaction has been implemented for chemoselectively breaking indolyl C=C bonds embedded in the aromatic system. The synthetic power of this strategy has been demonstrated by using structurally diverse indoles bearing common electron- withdrawing groups including (thio)ester, amide, ketone, nitrile and even aromatics at either C2 or C3 positions and ubiquitous carboxylic acids as radical coupling partner with high trans- stereoselectivity (>20:1 dr). This manifold can also be applied to other aromatic heterocycles including pyrroles, benzofurans and benzothiophenes. Furthermore, enantioselective dear- omatization of indoles has been achieved by a chiral camphorsultam auxiliary with high diastereoselectivity. 1 Departments of Pharmacology and Toxicology and Chemistry and Biochemistry, and BIO5 Institute, University of Arizona, Tucson, AZ, USA. 2 Department of Chemistry and Chemical
[Show full text]
The Relationship Between Growth and Indole-3-Acetic Acid Content of Roots of Pisum Sativum L
The Relationship between Growth and Indole-3-Acetic Acid Content of Roots of Pisum sativum L. Author(s): William L. Pengelly and John G. Torrey Reviewed work(s): Source: Botanical Gazette, Vol. 143, No. 2 (Jun., 1982), pp. 195-200 Published by: The University of Chicago Press Stable URL: http://www.jstor.org/stable/2474706 . Accessed: 03/04/2012 15:52 Your use of the JSTOR archive indicates your acceptance of the Terms & Conditions of Use, available at . http://www.jstor.org/page/info/about/policies/terms.jsp JSTOR is a not-for-profit service that helps scholars, researchers, and students discover, use, and build upon a wide range of content in a trusted digital archive. We use information technology and tools to increase productivity and facilitate new forms of scholarship. For more information about JSTOR, please contact [email protected]. The University of Chicago Press is collaborating with JSTOR to digitize, preserve and extend access to Botanical Gazette. http://www.jstor.org BOT. GAZ. 143(2):195-200. 1982. ? 1982 by The Universityof Chicago. All rightsreserved. 0006-8071/82/4302-0004$02.00 THE RELATIONSHIP BETWEEN GROWTH AND INDOLE-3-ACETIC ACID CONTENT OF ROOTS OF PISUM SATIVUM L. WILLIAM L. PENGELLY1 AND JOHN G. TORREY Cabot Foundation,Harvard University,Petersham, Massachusetts 01366 The indole-3-aceticacid (IAA) contentof roots and shoots of light-grownpea seedlings(Pisizmi sali,zim L. 'Little Marvel') growingat differentrates was studied by radioimmunoassayduring the firstweek of germination.Different growth rates were obtained by daily irrigationwith either deionized water or a dilute Hoagland's mineralnutrient solution.
[Show full text]
One Hundred Years of Benzotropone Chemistry
One hundred years of benzotropone chemistry Arif Dastan*1, Haydar Kilic2,3 and Nurullah Saracoglu*1 Review Open Access Address: Beilstein J. Org. Chem. 2018, 14, 1120–1180. 1Department of Chemistry, Science Faculty, Atatürk University, doi:10.3762/bjoc.14.98 25240, Erzurum, Turkey, 2Oltu Vocational Training School, Atatürk University, 25400, Erzurum, Turkey and 3East Anotolia High Received: 27 December 2017 Technology Application and Research Center, Atatürk University, Accepted: 20 April 2018 25240, Erzurum, Turkey Published: 23 May 2018 Email: Associate Editor: B. Stoltz Arif Dastan* - [email protected]; Nurullah Saracoglu* - [email protected] © 2018 Dastan et al.; licensee Beilstein-Institut. License and terms: see end of document. * Corresponding author Keywords: benzotropolone; benzotropone; dibenzotropone; halobenzotropolone; halobenzotropone; tribenzotropone; tropone Abstract This review focuses on the chemistry of benzo-annulated tropones and tropolones reported since the beginning of the 20th century, which are currently used as tools by the synthetic and biological communities. Review 1. Introduction Tropone (1) and tropolone (2) have fascinated organic chemists have been reported in the literature in a number of natural forms for well over one hundred years. The carbocycles 1 and 2 are a (Figure 1) [1-8]. These compounds have a structural class special variety of organic compounds and represent a nonben- spacing from the simple monocyclic tropones, such as the po- zenoid type of aromatic system (Scheme 1). Their dipolar reso- tent antifungal and antibiotic monoterpene β-thujaplicin (4) nance structures such as tropylium oxide form 1B and 2B have [17-23] (isolated from the heartwood and essential oils of trees been reported to provide a Hückel sextet of electrons that is of the family Cupressaceae), to complex macrocyclic ana- necessary for aromaticity (Scheme 1) [1-9].
[Show full text]
Heterocyclic Chemistrychemistry
HeterocyclicHeterocyclic ChemistryChemistry Professor J. Stephen Clark Room C4-04 Email: [email protected] 2011 –2012 1 http://www.chem.gla.ac.uk/staff/stephenc/UndergraduateTeaching.html Recommended Reading • Heterocyclic Chemistry – J. A. Joule, K. Mills and G. F. Smith • Heterocyclic Chemistry (Oxford Primer Series) – T. Gilchrist • Aromatic Heterocyclic Chemistry – D. T. Davies 2 Course Summary Introduction • Definition of terms and classification of heterocycles • Functional group chemistry: imines, enamines, acetals, enols, and sulfur-containing groups Intermediates used for the construction of aromatic heterocycles • Synthesis of aromatic heterocycles • Carbon–heteroatom bond formation and choice of oxidation state • Examples of commonly used strategies for heterocycle synthesis Pyridines • General properties, electronic structure • Synthesis of pyridines • Electrophilic substitution of pyridines • Nucleophilic substitution of pyridines • Metallation of pyridines Pyridine derivatives • Structure and reactivity of oxy-pyridines, alkyl pyridines, pyridinium salts, and pyridine N-oxides Quinolines and isoquinolines • General properties and reactivity compared to pyridine • Electrophilic and nucleophilic substitution quinolines and isoquinolines 3 • General methods used for the synthesis of quinolines and isoquinolines Course Summary (cont) Five-membered aromatic heterocycles • General properties, structure and reactivity of pyrroles, furans and thiophenes • Methods and strategies for the synthesis of five-membered heteroaromatics
[Show full text]
Tryptophan Catabolism by Lactobacillus Spp. : Biochemistry and Implications on Flavor Development in Reduced-Fat Cheddar Cheese
Utah State University DigitalCommons@USU All Graduate Theses and Dissertations Graduate Studies 5-1998 Tryptophan Catabolism by Lactobacillus spp. : Biochemistry and Implications on Flavor Development in Reduced-Fat Cheddar Cheese Sanjay Gummalla Utah State University Follow this and additional works at: https://digitalcommons.usu.edu/etd Part of the Food Chemistry Commons, Food Microbiology Commons, and the Food Processing Commons Recommended Citation Gummalla, Sanjay, "Tryptophan Catabolism by Lactobacillus spp. : Biochemistry and Implications on Flavor Development in Reduced-Fat Cheddar Cheese" (1998). All Graduate Theses and Dissertations. 5454. https://digitalcommons.usu.edu/etd/5454 This Thesis is brought to you for free and open access by the Graduate Studies at DigitalCommons@USU. It has been accepted for inclusion in All Graduate Theses and Dissertations by an authorized administrator of DigitalCommons@USU. For more information, please contact [email protected]. TRYPTOPHAN CATABOLISM BY LACTOBACILLUS SPP.: BIOCHEMISTRY AND IMPLICATIONS ON FLAVOR DEVELOPMENT IN REDUCED-FAT CHEDDAR CHEESE by Sanjay Gummalla A thesis submitted in partial fulfillment of the requirements for the degree of MASTER OF SCIENCE m Nutrition and Food Sciences Approved: UTAH STATE UNIVERSITY Logan, Utah 1998 11 Copyright © Sanjay Gummalla 1998 All Rights Reserved w ABSTRACT Tryptophan Catabolism by Lactobacillus spp. : Biochemistry and Implications on Flavor Development in Reduced-Fat Cheddar Cheese by Sanjay Gummalla, Master of Science Utah State University, 1998 Major Professor: Dr. Jeffery R. Broadbent Department: Nutrition and Food Sciences Amino acids derived from the degradation of casein in cheese serve as precursors for the generation of key flavor compounds. Microbial degradation of tryptophan (Trp) is thought to promote formation of aromatic compounds that impart putrid fecal or unclean flavors in cheese, but pathways for their production have not been established.
[Show full text]
Synthesis and Chemistry of Indole
Synthesis and Chemistry of Indole 1. Introduction: ➢ Indole is a benzo[b]pyrrole formed by the fusion of benzene ring to the 2,3 positions of pyrrole nucleus. ➢ The word “Indole” is derived from the word India, as the heterocycle was first isolated from a blue dye “Indigo” produced in India during sixteenth century. ➢ In 1886, Adolf Baeyer isolated Indole by the pyrolysis of oxindole with Zn dust. Oxindole was originally obtained by the reduction of isatin, which in turn was isolated by the oxidation of Indigo. ➢ Commercially indole is produced from coal tar ➢ Indole is the most widely distributed heterocyle ➢ Indole nucleus is an integral part of thousands of naturally occurring alkaloids, drugs and other compounds. By Dr. Divya Kushwaha 2. Synthesis of Indole 2.1. Fischer Indole Synthesis: ➢ This reaction was discovered in 1983 by Emil Fischer and so far remained the most extensively used method of preparation of indoles. ➢ The synthesis involves cyclization of arylhydrazones under heating conditions in presence of protic acid or lewis acids such as ZnCl2, PCl3, FeCl3, TsOH, HCl, H2SO4, PPA etc. ➢ The starting material arylhydrazoles can be obtained from aldehydes, ketones, keto acids, keto esters and diketones etc. ➢ Reaction produces 2,3-disubtituted products. Unsymmetrical ketones can give a mixture of indoles. 2.2 Madelung Synthesis: ➢ Base catalyzed cyclization of 2-(acylamino)-toluenes under very harsh conditions (typically sodium amide or potassium t-butoxide at 250-300oC). ➢ Limited to the synthesis of simple indoles such as 2-methyl indoles without having any sensitive groups. By Dr. Divya Kushwaha Mechanism: ➢ A modern variant of madelung reaction is performed under milder conditions by the use of alkyllithiums as bases.
[Show full text]
Roles of Indole As an Interspecies and Interkingdom Signaling Molecule Jin-Hyung Lee,1 Thomas K
TIMI 1232 No. of Pages 12 Review Roles of Indole as an Interspecies and Interkingdom Signaling Molecule Jin-Hyung Lee,1 Thomas K. Wood,2 and Jintae Lee1,* A number of bacteria, and some plants, produce large quantities of indole, Trends which is widespread in animal intestinal tracts and in the rhizosphere. Indole, as A variety of bacteria, and some plants, an interspecies and interkingdom signaling molecule, plays important roles in produce large quantities of indole, and bacterial pathogenesis and eukaryotic immunity. Furthermore, indole and its thus, indole and its derivatives are widespread in prokaryotic and eukar- derivatives are viewed as potential antivirulence compounds against antibiotic- yotic communities. Recently, indole resistant pathogens because of their ability to inhibit quorum sensing and was shown to be an intercellular, inter- ﬂ species, and interkingdom signaling virulence factor production. Indole modulates oxidative stress, intestinal in am- molecule. mation, and hormone secretion in animals, and it controls plant defense sys- tems and growth. Insects and nematodes can recognize indole, which controls Indole and its derivatives can suppress the bacterial pathogenesis of several some of their behavior. This review presents current knowledge regarding indole antibiotic-resistant pathogens by inhi- and its derivatives, their biotechnological applications and their role in prokary- biting quorum sensing and virulence otic and eukaryotic systems. factor production. Insects sense indole, which controls Intercellular, Interspecies, and Interkingdom Signaling by Indole and Its their behavior. Furthermore, indole Derivatives controls plant defense systems and Bacteria and eukaryotes coexist in the natural environment, and bacterial metabolites modulate growth, and modulates oxidative eukaryotic immunity. The commensal bacteria colonize the surfaces of animal and plant cells and stress, intestinal inﬂammation, and hor- mone secretion in animals.
[Show full text]
The Structure of Dimethylallyl Tryptophan Synthase Reveals a Common Architecture of Aromatic Prenyltransferases in Fungi and Bacteria
The structure of dimethylallyl tryptophan synthase reveals a common architecture of aromatic prenyltransferases in fungi and bacteria Ute Metzgera,1, Christoph Schallb,1, Georg Zocherb, Inge Unso¨ lda, Edyta Stecc, Shu-Ming Lic, Lutz Heidea,2, and Thilo Stehleb,d aPharmazeutisches Institut, Universita¨t Tu¨ bingen, 72076 Tu¨bingen, Germany; bInterfakulta¨res Institut fu¨r Biochemie, Universita¨t Tu¨ bingen, 72076 Tu¨bingen, Germany; cInstitut fu¨r Pharmazeutische Biologie, Universita¨t Marburg, 35037 Marburg, Germany; and dDepartment of Pediatrics, Vanderbilt University School of Medicine, Nashville, TN 37232 Edited by Arnold L. Demain, Drew University, Madison, NJ, and approved July 9, 2009 (received for review May 5, 2009) Ergot alkaloids are toxins and important pharmaceuticals that are farnesyl diphosphate synthase (11, 12), DMATS does not require produced biotechnologically on an industrial scale. The ﬁrst com- magnesium or other divalent cations for its enzymatic activity, mitted step of ergot alkaloid biosynthesis is catalyzed by dimethy- although addition of 4 mM CaCl2 moderately increases its reaction lallyl tryptophan synthase (DMATS; EC 2.5.1.34). Orthologs of velocity (10). The structural gene coding for DMATS in Claviceps, DMATS are found in many fungal genomes. We report here the termed dmaW, was identified by Tsai et al. (13). A similar gene, x-ray structure of DMATS, determined at a resolution of 1.76 Å. A fgaPT2, exists in the biosynthetic gene cluster of fumigaclavine, in complex of DMATS from Aspergillus fumigatus with its aromatic the genome sequence of A. fumigatus. Expression of the DMATS substrate L-tryptophan and with an analogue of its isoprenoid sequence from A.
[Show full text]
Bacterial Tropone Natural Products and Derivatives
Reviews ChemBioChem doi.org/10.1002/cbic.201900786 1 2 3 Bacterial Tropone Natural Products and Derivatives: 4 5 Overview of their Biosynthesis, Bioactivities, Ecological Role 6 and Biotechnological Potential 7 8 Ying Duan,[a] Melanie Petzold,[a] Raspudin Saleem-Batcha,[a] and Robin Teufel*[a] 9 10 11 Tropone natural products are non-benzene aromatic com- sulfur among other reactions. Tropones play important roles in 12 pounds of significant ecological and pharmaceutical interest. the terrestrial and marine environment where they act as 13 Herein, we highlight current knowledge on bacterial tropones antibiotics, algaecides, or quorum sensing signals, while their 14 and their derivatives such as tropolones, tropodithietic acid, bacterial producers are often involved in symbiotic interactions 15 and roseobacticides. Their unusual biosynthesis depends on a with plants and marine invertebrates (e.g., algae, corals, 16 universal CoA-bound precursor featuring a seven-membered sponges, or mollusks). Because of their potent bioactivities and 17 carbon ring as backbone, which is generated by a side reaction of slowly developing bacterial resistance, tropones and their 18 of the phenylacetic acid catabolic pathway. Enzymes encoded derivatives hold great promise for biomedical or biotechnolog- 19 by separate gene clusters then further modify this key ical applications, for instance as antibiotics in (shell)fish 20 intermediate by oxidation, CoA-release, or incorporation of aquaculture. 21 22 23 1. Introduction pathways and unforeseen enzyme reactions may impair 24 detection and structural predictions.[3] 25 Structurally diverse natural products are typically generated by A remarkable case of such a noncanonical biosynthetic 26 dedicated secondary metabolic pathways that mostly operate route is found for bacterial tropone (9) natural products and 27 in microbes and plants.
[Show full text]