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Plankton and Structure

Matthew Church OCN 621 Spring 2009 Food Web Structure is Central to Elemental Cycling “Microsystems”

In every liter of there are all the for a complete, functional . These organisms form the fabric of life in the - the other organisms are embroidery on this fabric. Important things to know about

• Population size and biomass (biogenic ): provides information on energy available to support the food web

• Growth, production, : turnover of material through the food web and insight into physiology.

• Controls on growth and population size In a “typical” liter of seawater… • None • 10 • 1,000 • 10,000 • Nanoflagellates 1,000,000 • 100,000,000 • 1,000,000,000 • 10,000,000,000 High does not necessarily equate to high biomass. Size is important.

1011 1010 Viruses 109 108 Cyanobacteria 107 106 105 104 103 102 101 100

Abudance (number per liter)Abudance -1 10 Zooplankton 10-2 0.01 0.1 1 10 100 1000 Size (µm) Why are pelagic organisms so small?

Consider a spherical cell: SA = 3.1 µm2 SA= 4πr2 r = 0.50 µm V = 0.52 µm3 SA : V = 15.7 V= 4/3 πr3

SA = 12.6 µm2 r = 1.0 V = 4.2 µm3 SA : V = 3.0

The smaller the cell, the larger the SA:V Greater SA:V increases their ability to absorb from a dilute solution. This may allow smaller cells to out compete larger cells for limiting nutrients. • “Typical” concentrations of inorganic nutrients in the open sea: – Subtropical North Pacific: • +nitrite 1-10 nM (0.001-0.01 µM) • 10-40 nM (0.01-0.04 µM) • “Typical” concentrations of inorganic nutrients in soils: • Nitrate+Nitrite 5-100 µM • Phosphate 5-30 µM Why do we care about biomass?

• Information on biologically stored energy • Quantify the amount of carbon held in marine biota (carbon budgeting purposes) • Identify how much “material” is available to at each step of the . Primary producers

Primary consumers (herbivores)

Secondary consumers (carnivores)

Tertiary consumers Biomass (mg C L-1) The way biomass is distributed among trophic levels in the food web provides clues to the efficiency of energy transfer through the ecosystem .

Note: this is a static depiction-it does not provide information on how fast biomass turns over within each . Why carbon? • Common “currency” among all organisms. • Carbon serves as a proxy for ecosystem energy

AN = 6 (6P/6N) AW = 12.011 Oxidation: -4 to +4 Electrons: 1s22s2p2 Isotopes: 11C, 12C, 13C, 14C Forms: oxides, hydrides, sulfides and halides All living organisms utilize the same molecular building blocks. • Carbohydrates: sugars and sugar polymers (mono- and polysaccharides). Monosaccharides used for energy and nutrients (carbon), polysaccharides are used for energy storage (starch), cell structure (chitin).

• Lipids: long-chained hydrocarbons; includes fatty acids, phospholipids, pigments, steroids. Hydrophobic hydrocarbon and hydrophilic phosphate- containing functional group makes phospholipids ideal membranes. Molecular constituents of cells (cont.) • Proteins: amino acid polymers used for regulation of metabolism (enzymes), cell structure, /energy storage, solute transport, signaling, defense.

• Nucleic acids: polymers of nucleotides that comprise DNA and RNA. Store and transmit hereditary information (also structural RNAs). The elemental composition of a typical bacterium Substrate Element % dry Cellular Components Source

C 55 DOC, CO2 Main constituent of cellular material Constituent of cell material and cell

O 20 O2, DOM, CO2 ; O2 primary electron acceptor in aerobic respiration NH , NO -, NO -, Constituent of amino acids, nucleic N 10 3 3 2 DON, N2 acids, nucleotides, and coenzymes Main constituent of organic compounds H 8 DOM, H 2 and cell water Constituent of nucleic acids, P 3 PO 3-, DOP 4 nucleotides, phospholipids, LPS Constituent of cysteine, methionine, S1SO, H S, HS, DOM 4 2 glutathione, several coenzymes Main cellular inorganic cation and K 1 Potassium salts cofactor for certain enzymes Inorganic cellular cation, cofactor for Mg 0.5 Magnesium salts certain enzymatic reactions Inorganic cellular cation, cofactor for Ca 0.5 Calcium salts certain enzymes Component of cytochromes and Fe- salts, Fe 0.002 proteins; cofactor for many DOM enzymes The Struggle for Composition

2 10 • are 101 Mg S 100 Ca K relatively enriched in 10-1 C P, N, C, Fe compared 10-2 to the surface 10-3 seawater. 10-4 10-5 •Energy must be 10-6 P N expended to acquire 10-7 10-8 and maintain 10-9 intracellular % surface ocean % surface Fe 10-10 concentrations of 10-11 these elements. 10-3 10-2 10-1 100 101 102 % cell composition How do we measure plankton biomass?

• Count and measure individuals and calculate carbon • Weigh (either dry or wet) cells and calculate biomass • Estimate living carbon using some biomolecule proxy (DNA, ATP, chlorophyll) Particulate carbon

• Technique: combust (oxidize) organic material

and measure resulting CO2. • Need to concentrate cells: typically glass filters (usually ~0.7 µm pore size) or tangential flow (Fukuda et al. 1998) • Measurements include living cells and . Zooplankton • Small zooplankton are usually enumerated by microscopy and converted to cell carbon • Larger zooplankton can be weighed for approximation of carbon.

Primary consumers (herbivores)

Secondary consumers (carnivores) Phytoplankton carbon

• Phytoplankton carbon determinations are most often derived from measurements of chlorophyll; this requires a conversion factor. • Phytoplankton carbon can also be estimated based on cell size and abundances (microscopy and/or flow cytometry).

Primary producers Chlorophyll is frequently estimated by satellite remote sensing. Carbon to Chlorophyll Conversions • Chlorophyll concentrations can vary depending on physiological and environmental history of the cells NAB Arabian Sea

Eq-Pac HOT

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Depth (m) How much 150 detritus?

200 0 1000 2000 3000 4000 0 5 10 15 20 25 0 500 1000 1500 2000 Chlorophyll a (ng L -1) Particulate Carbon (µmol L -1) C: Chl (mg : mg) In the ocean gyres, chlorophyll concentrations are low in the surface water, greater at depth (80-150 m). In contrast, most of the production (=synthesis of biomass) occurs in the well- lit upper ocean. ATP as an indicator of biomass

• All living cells contain ATP • ATP degrades rapidly after cell death • ATP:C ratio appears well conserved • ATP:C ~250:1 (mg : mg) • Non-discriminate, includes all living material Euphotic zone typically ~30-75% of particulate material contains ATP. Determining Biomass by Microscopy

• Filter seawater onto polycarbonate filter or concentrate cells by settling (large phytoplankton) • Stain cells • Visualize cells by and/or fluorescence microscopy • Count cells and measure cell sizes • Use conversion factors to calculate carbon Application of flow cytometry to abundance/cell sizing Planktonic biomass generally declines with increasing depth-why?

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600 Depth (m) 800 Phytoplankton Bacteria Total Biomass 1000

0246810 Biomass (µg C L -1) Important exceptions to the logarithmic decline in biomass with depth Plankton biomass relationships

• Biomass pyramids in large areas of the open ocean appear inverted, with secondary producers comprising a major fraction of ecosystem biomass.

Gasol et al. (1997) An inverted food web in low ecosystems?

Primary producers

Primary consumers (Bacteria)

Secondary consumers (microzooplankton)

Tertiary consumers (mesozooplankton)

How is this biomass pyramid sustained? Rapid turnover of phytoplankton biomass.