Note: A:Score: the Score of the Target Protein Used to Blast. B:E-Value: Stastistic Value

Table S2 Virulent traits of E.fecalis Deng1 in the whole genome

Scorea E-Valueb HSP-Lenc %-Identd %-Simile Query-Namef Hit-Nameg Descriptionh

175 6.15E-13 237 26% 48% DENG_00016 R010038 (gi:62389290) hmuV (cg0469) - cobalamin/Fe3+-

siderophores transport system, ATPase component

[Corynebacterium glutamicum str. ATCC 13032 (Bielefeld)]

197 3.21E-15 342 26% 44% DENG_00017 R016101 (gi:229588672) pilR (PFLU1132) - putative two-component

system, response regulator [Pseudomonas fluorescens str.

SBW25]

157 6.07E-11 160 27% 52% DENG_00038 R004164 (gi:46907864) lap (LMOf2365_1656) - aldehyde-alcohol

dehydrogenase [Listeria monocytogenes str. F2365 (serovar

200 1.50E-16 139 35% 53% DENG_00046 R012450 (gi:49478936) cysE (BT9727_4948) - serine acetyltransferase

[Bacillus thuringiensis str. 97-27]

604 5.98E-63 313 42% 63% DENG_00055 R002679 (gi:125718778) lmb (SSA_1990) - Zn-porter lipoprotein,

putative [Streptococcus sanguinis str. SK36]

325 7.59E-31 206 37% 56% DENG_00056 R009451 (gi:30063295) sitB (S1965) - Iron transport protein, ATP-

binding component [Shigella flexneri str. 2457T (serotype

192 2.87E-15 257 23% 48% DENG_00057 R008992 (gi:91210363) sitD (UTI89_C1336) - SitD protein

[Escherichia coli str. UTI89 (UPEC)]

147 7.82E-10 107 34% 58% DENG_00059 R008093 (gi:121612248) CJJ81176_1422 - capsular biosynthesis

nucleotidyltransferase, putative [Campylobacter jejuni str. 81-

176 (subsp. jejuni)]

1168 4.41E-128 539 42% 63% DENG_00064 R015707 (gi:217963642) oppA (LMHCC_0346) - oligopeptide ABC

transporter, oligopeptide-binding protein [Listeria

monocytogenes str. HCC23 (serotype 4a)]

169 9.27E-13 214 25% 48% DENG_00072 R015729 (gi:217965714) prfA (LMHCC_2443) - listeriolysin

regulatory protein [Listeria monocytogenes str. HCC23

(serotype 4a)]

250 6.24E-22 242 31% 50% DENG_00074 R003212 (gi:76787982) cylG (SAK_0792) - cylG protein

[Streptococcus agalactiae str. A909 (serotype Ia)]

368 1.09E-34 1165 24% 38% DENG_00090 R014642 (gi:157151048) cpbA (SGO_1487) - LPXTG cell wall surface

protein, Cna protein B-type domain [Streptococcus gordonii

str. Challis (substr. CH1)]

190 1.10E-14 201 27% 47% DENG_00092 R012355 (gi:47566458) atxA (GBAA_pXO1_0146) - transcriptional

activator atxa, (pxo1-119) [Bacillus anthracis str. Ames

Ancestor plasmid pXO1]

778 4.28E-83 327 48% 64% DENG_00108 R011947 (gi:71735587) argK (PSPPH_4319) - phaseolotoxin-

insensitive ornithine carbamoyltransferase [Pseudomonas

syringae str. 1448A (pv. phaseolicola)]

246 2.14E-21 181 35% 51% DENG_00115 R005819 (gi:2846548) mlsA1 (MUP040c) - Type I modular polyketide

synthase [Mycobacterium ulcerans str. Agy99 plasmid

pMUM001] 175 9.35E-13 311 23% 42% DENG_00116 R003015 (gi:28895211) endoS (SPs0299) - hypothetical protein

[Streptococcus pyogenes str. SSI-1 (serotype M3)]

176 1.81E-13 285 29% 42% DENG_00121 R011860 (gi:116049856) phzF2 (PA14_39890) - probable phenazine

biosynthesis protein [Pseudomonas aeruginosa str. UCBPP-

452 4.75E-45 531 25% 47% DENG_00125 R008881 (gi:26249408) hlyB (c3573) - Hemolysin B [Escherichia coli

str. CFT073 (UPEC)]

206 7.76E-17 355 25% 45% DENG_00142 R012852 (gi:29375537) bopD (EF0954) - sugar-binding transcriptional

regulator, LacI family [Enterococcus faecalis str. V583]

258 1.54E-22 222 31% 53% DENG_00151 R005294 (gi:120404101) ddrA (Mvan_3122) - daunorubicin resistance

ABC transporter ATPase subunit [Mycobacterium vanbaalenii

str. PYR-1]

190 5.93E-15 346 25% 45% DENG_00164 R010070 (gi:145297067) fagD (cgR_2963) - hypothetical protein

[Corynebacterium glutamicum str. R]

609 1.10E-63 252 46% 67% DENG_00166 R010050 (gi:68536864) fagC (jk1774) - putative iron ABC transport

system, ATP-binding protein [Corynebacterium jeikeium str.

449 5.31E-45 307 35% 57% DENG_00167 R010065 (gi:62389398) fagA (cg0591) - cobalamin/Fe3+-siderophores

transport system, permease component [Corynebacterium

glutamicum str. ATCC 13032 (Bielefeld)]

440 5.92E-44 335 33% 55% DENG_00168 R010064 (gi:145294652) fagA (cgR_0602) - hypothetical protein

238 2.17E-20 251 30% 47% DENG_00169 R015687 (gi:217964213) lap (LMHCC_0928) - bifunctional

acetaldehyde-CoA/alcohol dehydrogenase [Listeria

171 2.48E-12 141 36% 47% DENG_00176 R012525 (gi:13508404) tuf (MPN665) - elongation factor Tu

[Mycoplasma pneumoniae str. M129]

1608 2.62E-179 395 75% 86% DENG_00177 R012532 (gi:42560712) tuf (MSC_0160) - translation elongation factor

Tu [Mycoplasma mycoides str. PG1]

416 4.93E-41 278 34% 51% DENG_00179 R020162 (gi:315444220) pcaA (Mspyr1_26320) - methyltransferase,

cyclopropane fatty acid synthase [Mycobacterium gilvum str.

Spyr1]

331 1.93E-31 237 35% 57% DENG_00214 R008883 (gi:110644661) hlyB (ECP_4554) - alpha-hemolysin

translocation ATP-binding protein HlyB [Escherichia coli str.

536 (UPEC)]

307 1.50E-28 270 32% 55% DENG_00215 R016054 (gi:194097927) fbpC (NGK_0348) - Fe(3+) ions import ATP-

binding protein fbpC [Neisseria gonorrhoeae str.

NCCP11945]

228 4.49E-19 224 29% 47% DENG_00223 R000340 (gi:108808062) YPA_2067 - histidine transport system

permease protein HisQ [Yersinia pestis str. Antiqua (biovar

antiqua)] 204 1.02E-16 105 45% 64% DENG_00228 R002520 (gi:21281862) cap8J (MW0133) - capsular polysaccharide

synthesis enzyme Cap8J [Staphylococcus aureus str. MW2]

392 4.18E-38 153 50% 65% DENG_00231 R004173 (gi:16803116) aut (lmo1076) - hypothetical protein [Listeria

monocytogenes str. EGD-e (serovar 1/2a)]

135 6.23E-09 102 29% 49% DENG_00260 R010411 (gi:152986357) chpD (PSPA7_0516) - probable

transcriptional regulator [Pseudomonas aeruginosa str. PA7]

638 9.58E-67 414 36% 53% DENG_00267 R005651 (gi:145223363) kasB (Mflv_2776) - beta-ketoacyl synthase

[Mycobacterium gilvum str. PYR-GCK]

255 4.84E-23 135 41% 59% DENG_00268 R015527 (gi:163843417) fabZ (BSUIS_A1200) - beta-hydroxyacyl-

(acyl-carrier-protein) dehydratase FabZ [Brucella suis str.

ATCC 23445 chromosome I]

136 7.94E-09 143 30% 50% DENG_00278 R009816 (gi:33152280) kpsF (HD1168) - arabinose-5-phosphate

isomerase [Haemophilus ducreyi str. 35000HP]

318 2.37E-29 606 25% 42% DENG_00283 R014451 (gi:161616855) mgtB (SPAB_04676) - hypothetical protein

[Salmonella enterica str. SPB7 (serovar Paratyphi B)]

355 2.74E-34 225 37% 64% DENG_00359 R004243 (gi:116872809) lisR (lwe1393) - two-component response

regulator [Listeria welshimeri str. SLCC5334 (serovar 6b)]

290 2.47E-26 348 28% 49% DENG_00360 R011397 (gi:146306761) gacS (Pmen_1730) - multi-sensor hybrid

histidine kinase [Pseudomonas mendocina str. ymp]

318 5.18E-30 204 37% 56% DENG_00404 R003702 (gi:15793812) fbpC (NMA0842) - iron-uptake permease ATP-

binding protein [Neisseria meningitidis str. Z2491 (serogroup

143 1.55E-09 120 29% 52% DENG_00420 R016118 (gi:229590420) chpD (PFLU2959) - AraC-family

transcriptional regulator [Pseudomonas fluorescens str.

SBW25]

291 1.83E-26 500 22% 48% DENG_00428 R007309 (gi:54293730) iraB (lpl0783) - di/tripeptide transporter

homolog IraB [Legionella pneumophila str. Lens]

346 7.27E-33 499 26% 43% DENG_00432 R016434 (gi:218889443) pchD (PLES_06991) - pyochelin biosynthesis

protein PchD [Pseudomonas aeruginosa str. LESB58]

524 1.78E-53 452 32% 46% DENG_00433 R012194 (gi:70730850) pchA (PFL_3488) - salicylate biosynthesis

isochorismate synthase [Pseudomonas fluorescens str. Pf-5]

118 2.11E-06 176 27% 47% DENG_00438 R011949 (gi:66045851) sypB (Psyr_2615) - Amino acid adenylation

[Pseudomonas syringae str. B728a (pv. syringae)]

140 2.96E-09 155 29% 47% DENG_00447 R008225 (gi:121612579) gmhA-1 (CJJ81176_1166) - phosphoheptose

isomerase [Campylobacter jejuni str. 81-176 (subsp. jejuni)]

430 4.34E-43 201 46% 62% DENG_00451 R006112 (gi:118469767) sodA (MSMEG_6427) - [Mn] superoxide

dismutase [Mycobacterium smegmatis str. MC2 155] 609 1.85E-63 289 43% 63% DENG_00453 R012430 (gi:42784428) lytR (BCE_5383) - membrane-bound

transcriptional regulator LytR [Bacillus cereus str. ATCC

10987]

230 8.46E-20 179 37% 51% DENG_00455 R014454 (gi:161505693) mgtC (SARI_03869) - hypothetical protein

[Salmonella enterica str. RSK2980 (subsp. arizonae serovar

62:z4,z23:--)]

117 5.89E-07 68 38% 62% DENG_00464 R007296 (gi:54298648) feoA (lpp2712) - ferrous iron transporter A

[Legionella pneumophila str. Paris]

985 1.02E-106 727 35% 53% DENG_00465 R007291 (gi:52842863) feoB (lpg2657) - ferrous iron transporter B

[Legionella pneumophila str. Philadelphia 1]

165 2.11E-12 173 29% 49% DENG_00476 R008674 (gi:16132134) fimE (b4313) - tyrosine recombinase/inversion

of on/off regulator of fimA [Escherichia coli str. MG1655

(K12)]

1102 1.27E-120 388 52% 73% DENG_00480 R005070 (gi:27364223) wbfV/wcvB (VV1_0774) - Predicted UDP-

glucose 6-dehydrogenase [Vibrio vulnificus str. CMCP6

chromosome I]

573 2.30E-59 347 37% 61% DENG_00481 R003276 (gi:94993379) hasA (MGAS2096_Spy1882) - Hyaluronan

synthase [Streptococcus pyogenes str. MGAS2096 (serotype

191 2.34E-15 220 27% 43% DENG_00484 R009241 (gi:82524546) ipaH2.5 (SDY_P140) - invasion plasmid

antigen, fragment [Shigella dysenteriae str. 197 (serotype 1)

plasmid pSD1_197]

1015 3.45E-110 673 35% 56% DENG_00499 R004541 (gi:147672171) vasG (VC0395_0021) - clpB protein [Vibrio

cholerae str. O395 chromosome I]

1348 2.75E-149 324 74% 88% DENG_00539 R015726 (gi:226224673) bsh (Lm4b_02088) - conjugated bile acid

hydrolase [Listeria monocytogenes str. Clip81459 (serotype

154 3.80E-10 80 45% 57% DENG_00547 R003248 (gi:25010541) alp2 (gbs0470) - hypothetical protein

[Streptococcus agalactiae str. NEM316 (serotype III)]

SBW25]

plasmid pSD1_197]

321 2.05E-30 189 36% 55% DENG_00617 R004196 (gi:16804235) oppA (lmo2196) - hypothetical protein

[Listeria monocytogenes str. EGD-e (serovar 1/2a)]

445 9.45E-45 230 39% 61% DENG_00622 R008980 (gi:26247467) sitB (c1599) - SitB protein [Escherichia coli

str. CFT073 (UPEC)]

437 1.01E-43 273 35% 62% DENG_00623 R008986 (gi:110641372) sitC (ECP_1190) - iron transport protein,

inner membrane component [Escherichia coli str. 536

(UPEC)] 1284 7.80E-142 300 81% 90% DENG_00624 R003257 (gi:125717136) psaA (SSA_0260) - Manganese/Zinc ABC

transporter substrate-binding lipoprotein precursor, putative

[Streptococcus sanguinis str. SK36]

224 1.07E-18 246 29% 52% DENG_00628 R009584 (gi:16272034) msbA (HI0060) - ABC transporter ATP-

binding protein [Haemophilus influenzae str. Rd KW20

(serotype d)]

695 3.51E-73 558 31% 53% DENG_00630 R012230 (gi:28869794) ybtP (PSPTO_2604) - ABC transporter, ATP-

binding/permease protein [Pseudomonas syringae str. DC3000

(pv. tomato)]

761 7.85E-81 556 35% 55% DENG_00631 R012230 (gi:28869794) ybtP (PSPTO_2604) - ABC transporter, ATP-

binding/permease protein [Pseudomonas syringae str. DC3000

(pv. tomato)]

271 2.07E-24 289 33% 52% DENG_00673 R002016 (gi:49483335) eta (SAR1147) - hypothetical protein

[Staphylococcus aureus str. MRSA252]

406 5.41E-40 324 35% 51% DENG_00674 R016123 (gi:218890650) PLES_19101 - wbpP [Pseudomonas

aeruginosa str. LESB58]

820 5.05E-88 329 48% 69% DENG_00677 R004191 (gi:116872329) lplA1 (lwe0911) - lipoyltransferase and

lipoate-protein ligase family protein [Listeria welshimeri str.

SLCC5334 (serovar 6b)]

396 6.66E-39 242 38% 58% DENG_00703 R009908 (gi:68248710) hitC (NTHI0180) - iron-utilization ATP-

binding protein hFbpC [Haemophilus influenzae str. 86-

028NP (nontypeable)]

483 1.21E-48 426 32% 48% DENG_00706 R011220 (gi:104784331) algC (PSEEN5434) - phosphomannomutase

[Pseudomonas entomophila str. L48]

333 9.88E-32 220 31% 57% DENG_00724 R005293 (gi:145223975) ddrA (Mflv_3389) - daunorubicin resistance

ABC transporter ATPase subunit [Mycobacterium gilvum str.

PYR-GCK]

633 4.41E-66 410 36% 60% DENG_00737 R008570 (gi:110802269) CPR_0433 - transport protein ysiA

[Clostridium perfringens str. SM101]

169 2.71E-12 173 29% 51% DENG_00738 R012527 (gi:31544430) tuf (MGA_1033) - elongation factor Tu

[Mycoplasma gallisepticum str. R]

1070 1.63E-116 675 39% 56% DENG_00753 R015398 (gi:167033768) clpV1 (PputGB1_2769) - type VI secretion

ATPase, ClpV1 family [Pseudomonas putida str. GB-1]

1426 3.54E-158 428 65% 80% DENG_00764 R002995 (gi:22536290) tig/ropA (SAG0105) - trigger factor

[Streptococcus agalactiae str. 2603V/R (serotype V)]

113 4.90E-06 51 45% 67% DENG_00781 R017583 (gi:194450147) csgD (SeHA_C1253) - DNA-binding

transcriptional regulator CsgD [Salmonella enterica str. SL476

(serovar Heidelberg)]

syringae str. 1448A (pv. phaseolicola)] 184 7.08E-14 189 29% 46% DENG_00810 R017397 (gi:205354641) mgtB (SG3666) - Magnesium transport

ATPase, P-type 2 [Salmonella enterica str. 287/91 (serovar

Gallinarum)]

NCCP11945]

antiqua)]

117 6.42E-06 81 37% 59% DENG_00816 R018132 (gi:300858408) ciuD (cpfrc_00990) - iron ABC transporter

ATP-binding protein [Corynebacterium pseudotuberculosis

str. FRC41]

303 1.11E-27 656 25% 43% DENG_00834 R010420 (gi:15598353) PA3157 - probable acetyltransferase

[Pseudomonas aeruginosa str. PAO1]

152 9.97E-11 255 25% 40% DENG_00839 R018871 (gi:333992762) fbpA (JDM601_4122) - hypothetical protein

[Mycobacterium sp. str. JDM601]

590 5.19E-61 561 30% 55% DENG_00841 R009585 (gi:68248611) msbA (NTHI0072) - lipid A export ATP-

binding protein MsbA [Haemophilus influenzae str. 86-028NP

(nontypeable)]

675 6.26E-71 513 36% 54% DENG_00842 R009587 (gi:148827214) msbA (CGSHiGG_02810) - lipid A export

ATP-binding protein MsbA [Haemophilus influenzae str.

PittGG (nontypeable)]

NCCP11945]

135 1.07E-08 259 22% 43% DENG_00859 R003816 (gi:32266980) peb1 (HH1481) - probable ABC-type amino-

acid transporter periplasmic solute-binding protein

[Helicobacter hepaticus str. ATCC 51449]

379 3.38E-37 204 41% 62% DENG_00860 R014991 (gi:170717476) hitC (HSM_1248) - ABC transporter related

[Haemophilus somnus str. 2336]

antiqua)]

1019 8.41E-111 536 40% 57% DENG_00862 R004197 (gi:46908430) oppA (LMOf2365_2229) - oligopeptide ABC

monocytogenes str. F2365 (serovar 4b)]

136 5.31E-09 190 28% 54% DENG_00869 R008080 (gi:57238456) CJE1606 - haloacid dehalogenase-like

hydrolase domain/phosphoribulokinase domain protein

[Campylobacter jejuni str. RM1221]

117 1.86E-06 262 23% 39% DENG_00871 R007579 (gi:33591351) bplA (BP0093) - probable oxidoreductase

[Bordetella pertussis str. Tohama I] 435 2.67E-43 263 35% 59% DENG_00912 R014991 (gi:170717476) hitC (HSM_1248) - ABC transporter related

120 9.60E-08 61 39% 66% DENG_00916 R012856 (gi:29375148) cylR2 (EF0524) - transcriptional regulator,

Cro/CI family [Enterococcus faecalis str. V583]

752 1.29E-79 920 28% 49% DENG_00918 R014452 (gi:161505694) mgtB (SARI_03870) - hypothetical protein

62:z4,z23:--)]

237 5.04E-20 569 22% 40% DENG_00922 R017399 (gi:194444476) mgtB (SNSL254_A4041) - magnesium-

translocating P-type ATPase [Salmonella enterica str. SL254

(serovar Newport)]

359 2.31E-34 407 27% 48% DENG_00935 R013149 (gi:148269099) icaA (SaurJH9_2690) - glycosyl transferase,

family 2 [Staphylococcus aureus str. JH9]

171 1.03E-12 197 31% 50% DENG_00940 R008131 (gi:15792755) Cj1437c - putative aminotransferase

[Campylobacter jejuni str. NCTC 11168 (subsp. jejuni)]

NCCP11945]

antiqua)]

3277 0 856 70% 83% DENG_00950 R004165 (gi:16800743) lap (lin1675) - hypothetical protein [Listeria

innocua str. Clip11262 (serovar 6a)]

1234 9.99E-136 540 45% 66% DENG_00959 R004198 (gi:16801364) oppA (lin2300) - hypothetical protein [Listeria

innocua str. Clip11262 (serovar 6a)]

334 1.39E-31 165 43% 68% DENG_00964 R012574 (gi:42561491) oppF (MSC_0975) - oligopeptide ABC

transporter, permease component [Mycoplasma mycoides str.

651 1.22E-68 224 52% 76% DENG_00981 R004233 (gi:46907975) virR (LMOf2365_1770) - DNA-binding

response regulator [Listeria monocytogenes str. F2365

(serovar 4b)]

519 4.21E-53 330 34% 57% DENG_00982 R004236 (gi:16803781) virS (lmo1741) - hypothetical protein [Listeria

(nontypeable)]

639 1.04E-66 562 29% 52% DENG_00998 R009588 (gi:33152665) msbA (HD1630) - ABC transporter ATP-

binding protein MsbA [Haemophilus ducreyi str. 35000HP]

1766 0 336 100% 100% DENG_01011 R012852 (gi:29375537) bopD (EF0954) - sugar-binding transcriptional

regulator, LacI family [Enterococcus faecalis str. V583] 292 6.68E-27 291 34% 51% DENG_01018 R018987 (gi:333989135) proC (JDM601_0495) - pyrroline-5-

carboxylate reductase ProC [Mycobacterium sp. str. JDM601]

747 1.29E-79 273 54% 74% DENG_01114 R008579 (gi:125973345) Cthe_0827 - hemolysin A [Clostridium

thermocellum str. ATCC 27405]

200 4.54E-16 310 24% 47% DENG_01124 R003288 (gi:24378755) rgpG (SMU.246) - putative glycosyl

transferase N-acetylglucosaminyltransferase), RgpG

[Streptococcus mutans str. UA159]

197 5.56E-16 125 36% 57% DENG_01138 R020325 (gi:387876819) ideR (W7S_17175) - iron-dependent

repressor IdeR [Mycobacterium intracellulare str. MOTT36Y]

245 8.57E-21 223 32% 49% DENG_01143 R004543 (gi:147671674) vasH (VC0395_0020) - sigma-54 dependent

transcriptional regulator [Vibrio cholerae str. O395

chromosome I]

149 3.96E-10 373 22% 38% DENG_01154 R005530 (gi:118473462) eis (MSMEG_3513) - enhanced intracellular

survival protein [Mycobacterium smegmatis str. MC2 155]

123 8.75E-07 118 34% 54% DENG_01165 R009429 (gi:82543034) fepC (SBO_0449) - ATP-binding component of

ferric enterobactin transport [Shigella boydii str. 227 (serotype

217 6.32E-18 323 25% 44% DENG_01175 R007265 (gi:54294213) lbtB (lpl1278) - hypothetical protein

[Legionella pneumophila str. Lens]

887 5.26E-96 228 80% 90% DENG_01183 R004243 (gi:116872809) lisR (lwe1393) - two-component response

regulator [Listeria welshimeri str. SLCC5334 (serovar 6b)]

874 5.12E-94 492 41% 60% DENG_01184 R004246 (gi:16800483) lisK (lin1415) - two-component sensor

histidine kinase [Listeria innocua str. Clip11262 (serovar 6a)]

1111 1.62E-121 542 40% 64% DENG_01196 R004196 (gi:16804235) oppA (lmo2196) - hypothetical protein

[Listeria monocytogenes str. EGD-e (serovar 1/2a)]

194 1.15E-15 115 38% 57% DENG_01201 R003398 (gi:55821111) eps9 (stu1099) - exopolysaccharide

biosynthesis protein [Streptococcus thermophilus str. LMG

18311 (nonpathogenic)]

1133 2.52E-124 328 62% 77% DENG_01206 R012354 (gi:118480305) galE (BALH_4766) - UDP-glucose 4-

epimerase [Bacillus thuringiensis str. Al Hakam]

176 4.40E-13 547 28% 39% DENG_01228 R002724 (gi:25010688) gbs0628 - hypothetical protein [Streptococcus

agalactiae str. NEM316 (serotype III)]

228 5.34E-19 388 28% 40% DENG_01229 R002723 (gi:76787072) SAK_0776 - cell wall surface anchor family

protein [Streptococcus agalactiae str. A909 (serotype Ia)] 489 1.15E-49 287 40% 59% DENG_01230 R015120 (gi:169833610) srtB (SPH_0576) - sortase family protein

[Streptococcus pneumoniae str. Hungary19A-6 (serotype

3172 0 674 97% 98% DENG_01235 R012847 (gi:29375675) ace (EF1099) - collagen adhesin protein

[Enterococcus faecalis str. V583]

353 1.34E-33 302 30% 54% DENG_01236 R004437 (gi:15641459) rtxB (VC1448) - RTX toxin transporter [Vibrio

cholerae str. N16961 (O1 biovar eltor) chromosome I]

antiqua)]

655 6.21E-69 271 49% 68% DENG_01255 R008044 (gi:118475479) pebA (CFF8240_1164) - glutamine-binding

protein [Campylobacter fetus str. 82-40 (subsp. fetus)]

NCCP11945]

413 1.27E-40 192 48% 62% DENG_01259 R009601 (gi:16272217) orfM (HI0260) - putative deoxyribonucleotide

triphosphate pyrophosphatase [Haemophilus influenzae str.

Rd KW20 (serotype d)]

158 2.00E-11 149 34% 50% DENG_01271 R014623 (gi:161508422) cap5H (USA300HOU_0170) - capsular

polysaccharide biosynthesis protein Cap5H [Staphylococcus

aureus str. USA300_TCH1516]

122 2.30E-07 175 23% 41% DENG_01277 R013545 (gi:153951552) JJD26997_1750 - hypothetical protein

[Campylobacter jejuni str. 269.97 (subsp. doylei)]

200 6.19E-16 235 31% 49% DENG_01316 R008787 (gi:15833822) escN (ECs4568) - EscN [Escherichia coli str.

Sakai (EHEC O157:H7)]

310 2.36E-29 155 45% 60% DENG_01324 R014237 (gi:59711152) luxS (VF0545) - S-ribosylhomocysteinase

[Vibrio fischeri str. ES114 chromosome I]

203 1.25E-16 241 27% 46% DENG_01331 R011932 (gi:71737277) PSPPH_4304 - hydrolase, HAD-superfamily,

subfamily IIA [Pseudomonas syringae str. 1448A (pv.

phaseolicola)]

460 1.78E-46 230 44% 60% DENG_01337 R019258 (gi:333992254) phoP (JDM601_3614) - two-component

system response phosphate regulon transcriptional regulator

PhoP [Mycobacterium sp. str. JDM601]

392 4.72E-38 287 32% 53% DENG_01338 R019259 (gi:183984909) phoR (MMAR_4941) - two-component

system response phosphate sensor kinase, PhoR

[Mycobacterium marinum str. M]

135 8.38E-09 198 28% 43% DENG_01354 R020511 (gi:387873989) phoP (W7S_02915) - DNA-binding response

regulator PhoP [Mycobacterium intracellulare str. MOTT36Y]

634 1.85E-66 277 44% 69% DENG_01356 R012413 (gi:30023297) BC5265 - membrane-bound transcriptional

regulator LytR [Bacillus cereus str. ATCC 14579] 124 1.92E-07 203 25% 44% DENG_01363 R009904 (gi:30995355) hitB (HI0098) - iron(III) ABC transporter

permease protein [Haemophilus influenzae str. Rd KW20

(serotype d)]

167 1.76E-12 202 29% 50% DENG_01364 R003701 (gi:59800669) fbpB (NGO0216) - ABC transporter, permease

protein, iron related [Neisseria gonorrhoeae str. FA 1090]

112 6.33E-06 178 24% 48% DENG_01369 R012363 (gi:118480383) plcR (BALH_4848) - transcription activator

PlcR [Bacillus thuringiensis str. Al Hakam]

143 6.76E-09 382 22% 37% DENG_01384 R015662 (gi:225851651) cgs (BMEA_A0118) - glycosyltransferase 36

[Brucella melitensis str. ATCC 23457 chromosome I]

[Bordetella pertussis str. Tohama I]

1461 5.24E-162 565 50% 72% DENG_01395 R002645 (gi:125717748) pavA (SSA_0907) - Fibronectin-binding

protein A, putative [Streptococcus sanguinis str. SK36]

382 1.97E-37 232 39% 59% DENG_01405 R019289 (gi:333989572) mprA (JDM601_0932) - two component

response transcriptional regulatory protein MprA

318 1.39E-29 530 26% 46% DENG_01406 R011390 (gi:66046927) gacS (Psyr_3698) - Response regulator

receiver:ATP-binding region, ATPase-like:Histidine kinase,

HAMP region:Histidine kinase A, N-terminal:Hpt

[Pseudomonas syringae str. B728a (pv. syringae)]

401 6.11E-39 708 25% 46% DENG_01413 R001477 (gi:62182254) mgtB (SC3684) - Mg2+ transport protein

[Salmonella enterica str. SC-B67 (serovar Choleraesuis)]

172 2.01E-12 259 33% 48% DENG_01422 R012536 (gi:148377586) tuf (MAG736) - Elongation factor Tu (EF-Tu)

[Mycoplasma agalactiae str. PG2]

205 1.20E-16 156 35% 53% DENG_01442 R015133 (gi:169832565) lytA (SPH_0067) - lytic amidase (N-

acetylmuramoyl-L-alanine amidase) [Streptococcus

pneumoniae str. Hungary19A-6 (serotype 19A)]

111 8.24E-06 88 30% 52% DENG_01453 R003489 (gi:76788234) cpsY (SAK_1263) - transcriptional regulator

CpsY [Streptococcus agalactiae str. A909 (serotype Ia)]

2170 0 902 48% 67% DENG_01456 R014452 (gi:161505694) mgtB (SARI_03870) - hypothetical protein

62:z4,z23:--)]

484 6.03E-49 371 32% 54% DENG_01457 R009963 (gi:68249065) hemN (NTHI0594) - coproporphyrinogen III

oxidase [Haemophilus influenzae str. 86-028NP

(nontypeable)] 148 4.95E-10 64 50% 67% DENG_01463 R011609 (gi:28871892) hopI1 (PSPTO_4776) - type III effector HopI1

[Pseudomonas syringae str. DC3000 (pv. tomato)]

129 5.86E-08 247 27% 47% DENG_01471 R012363 (gi:118480383) plcR (BALH_4848) - transcription activator

PlcR [Bacillus thuringiensis str. Al Hakam]

129 4.38E-08 144 31% 49% DENG_01475 R002873 (gi:71910982) mf3 (M5005_Spy_1169) - streptodornase

[Streptococcus pyogenes str. MGAS5005 (serotype M1)]

322 1.83E-30 216 35% 55% DENG_01476 R009910 (gi:113460924) hitC (HS_0781) - iron(III) ABC transporter,

ATP-binding protein [Haemophilus somnus str. 129PT]

244 2.82E-21 223 25% 48% DENG_01487 R020195 (gi:379762594) ddrA (OCQ_31580) - drrA [Mycobacterium

intracellulare str. MOTT 64]

201 2.24E-16 211 26% 44% DENG_01489 R018795 (gi:183981784) ddrA (MMAR_1771) - daunorubicin-DIM-

transport ATP-binding protein ABC transporter DrrA

150 7.25E-11 155 27% 43% DENG_01495 R011286 (gi:66043334) algR (Psyr_0063) - Response regulator

receiver:LytTr DNA-binding region [Pseudomonas syringae

str. B728a (pv. syringae)]

2218 0 876 50% 69% DENG_01511 R017396 (gi:207858995) mgtB (SEN3585) - Magnesium transport

ATPase, P-type 2 [Salmonella enterica str. P125109 (serovar

Enteritidis)]

761 4.03E-81 316 46% 68% DENG_01514 R012544 (gi:47459418) pdhB (MMOB5830) - pyruvate dehydrogenase

E1 component beta subunit [Mycoplasma mobile str. 163K]

670 4.78E-70 727 30% 46% DENG_01552 R013492 (gi:145225066) nuoG (Mflv_4487) - NADH-quinone

oxidoreductase, chain G [Mycobacterium gilvum str. PYR-

62:z4,z23:--)]

NCCP11945]

151 3.57E-10 212 26% 41% DENG_01575 R010037 (gi:145294509) hmuV (cgR_0464) - hypothetical protein

176 4.01E-13 388 25% 41% DENG_01580 R009870 (gi:33151641) pgi (HD0418) - glucose-6-phosphate isomerase

[Haemophilus ducreyi str. 35000HP]

326 2.37E-30 311 31% 48% DENG_01662 R004572 (gi:28898442) vscN (VP1668) - type III secretion system ATPase [Vibrio parahaemolyticus str. RIMD 2210633

chromosome I]

368 2.32E-35 350 31% 49% DENG_01663 R010778 (gi:146282926) fliI (PST_2587) - flagellum-specific ATP

synthase FliI [Pseudomonas stutzeri str. A1501]

187 4.92E-15 158 30% 47% DENG_01666 R019231 (gi:169630624) sigH (MAB_3543c) - RNA polymerase

sigma-E factor [Mycobacterium abscessus str. ATCC 19977]

836 1.19E-89 435 42% 59% DENG_01671 R019004 (gi:169628525) lysA (MAB_1434) - diaminopimelate

decarboxylase [Mycobacterium abscessus str. ATCC 19977]

62:z4,z23:--)]

971 2.16E-105 303 62% 75% DENG_01687 R019211 (gi:253798215) sigA/rpoV (TBMG_01270) - RNA

polymerase sigma factor [Mycobacterium tuberculosis str.

KZN 1435]

996 2.05E-108 337 58% 72% DENG_01693 R015139 (gi:169832817) plr/gapA (SPH_2168) - glyceraldehyde-3-

phosphate dehydrogenase, type I [Streptococcus pneumoniae

str. Hungary19A-6 (serotype 19A)]

617 1.10E-64 250 50% 66% DENG_01701 R015142 (gi:182683690) slrA (SPCG_0720) - peptidyl-prolyl cis-trans

isomerase, cyclophilin-type [Streptococcus pneumoniae str.

CGSP14 (serotype 14)]

169 1.43E-12 168 31% 49% DENG_01704 R008679 (gi:91213958) fimE (UTI89_C5010) - type 1 fimbriae

regulatory protein FimE [Escherichia coli str. UTI89 (UPEC)]

220 2.15E-18 283 28% 49% DENG_01729 R009806 (gi:113461089) kdsA (HS_0946) - 2-dehydro-3-

deoxyphosphooctonate aldolase [Haemophilus somnus str.

129PT]

297 3.06E-27 156 42% 63% DENG_01736 R012430 (gi:42784428) lytR (BCE_5383) - membrane-bound

10987]

187 3.16E-14 275 26% 43% DENG_01742 R010051 (gi:25027240) fagC (CE0684) - putative iron transporter ATP-

binding protein [Corynebacterium efficiens str. YS-314]

186 1.42E-14 254 29% 44% DENG_01760 R010411 (gi:152986357) chpD (PSPA7_0516) - probable

transcriptional regulator [Pseudomonas aeruginosa str. PA7]

695 3.79E-73 577 30% 54% DENG_01762 R009586 (gi:148825660) msbA (CGSHiEE_03000) - fused lipid

transporter subunits of ABC superfamily: membrane

component/ATP-binding component [Haemophilus influenzae

str. PittEE (nontypeable)]

(nontypeable)] 128 8.18E-08 302 24% 42% DENG_01768 R012360 (gi:42784526) plcR (BCE_5481) - transcriptional regulator

PlcR, putative [Bacillus cereus str. ATCC 10987]

1009 1.00E-109 444 45% 66% DENG_01794 R004166 (gi:116873066) lap (lwe1650) - aldehyde-alcohol

dehydrogenase protein [Listeria welshimeri str. SLCC5334

(serovar 6b)]

192 1.38E-15 125 37% 66% DENG_01803 R011285 (gi:28867367) algR (PSPTO_0127) - alginate biosynthesis

regulatory protein AlgR [Pseudomonas syringae str. DC3000

(pv. tomato)]

669 2.29E-70 404 39% 56% DENG_01806 R004163 (gi:16803674) lap (lmo1634) - hypothetical protein [Listeria

392 1.53E-38 225 35% 61% DENG_01811 R016519 (gi:187733815) fepC (SbBS512_E0489) - iron-enterobactin

transporter ATP-binding protein [Shigella boydii str. CDC

3083-94 (serotype 18)]

467 3.78E-47 318 37% 58% DENG_01812 R010028 (gi:38233234) hmuU (DIP0627) - Iron-related transport

system membrane protein [Corynebacterium diphtheriae str.

NCTC 13129 (biotype gravis)]

136 9.31E-09 238 22% 49% DENG_01813 R009008 (gi:15833636) chuT (ECs4382) - putative hemin binding

protein [Escherichia coli str. Sakai (EHEC O157:H7)]

179 1.01E-13 172 29% 48% DENG_01820 R008671 (gi:110644753) fimB (ECP_4646) - type 1 fimbriae

regulatory protein FimB [Escherichia coli str. 536 (UPEC)]

664 6.70E-70 319 42% 66% DENG_01831 R012544 (gi:47459418) pdhB (MMOB5830) - pyruvate dehydrogenase

E1 component beta subunit [Mycoplasma mobile str. 163K]

243 3.58E-21 255 27% 50% DENG_01840 R003213 (gi:25010702) cylG (gbs0646) - hypothetical protein

107 6.37E-06 125 25% 49% DENG_01841 R008611 (gi:91213834) papX (UTI89_C4886) - putative regulator

PapX protein [Escherichia coli str. UTI89 (UPEC)]

276 5.79E-25 337 33% 48% DENG_01844 R018757 (gi:340627924) ppsC (MCAN_29551) - phenolpthiocerol

synthesis type-I polyketide synthase PPSC [Mycobacterium

canettii str. CIPT 140010059]

217 3.75E-18 215 28% 49% DENG_01852 R018795 (gi:183981784) ddrA (MMAR_1771) - daunorubicin-DIM-

transport ATP-binding protein ABC transporter DrrA

475 2.76E-48 217 45% 68% DENG_01863 R012281 (gi:15615428) hlyIII (BH2865) - hemolysin III [Bacillus

halodurans str. C-125]

177 3.36E-13 198 29% 48% DENG_01877 R010934 (gi:146282910) flhF (PST_2571) - flagellar biosynthesis

protein FlhF [Pseudomonas stutzeri str. A1501] 503 1.70E-51 233 43% 65% DENG_01880 R019253 (gi:169627776) phoP (MAB_0673) - putative DNA-binding

response regulator PhoP [Mycobacterium abscessus str. ATCC

19977]

334 2.19E-31 254 33% 57% DENG_01882 R011387 (gi:152987692) gacS (PSPA7_4582) - sensor/response

regulator hybrid [Pseudomonas aeruginosa str. PA7]

295 9.10E-28 132 52% 71% DENG_01902 R004224 (gi:16803884) lspA (lmo1844) - signal peptidase II [Listeria

729 3.55E-77 576 31% 54% DENG_01910 R009584 (gi:16272034) msbA (HI0060) - ABC transporter ATP-

binding protein [Haemophilus influenzae str. Rd KW20

(serotype d)]

636 2.23E-66 583 30% 52% DENG_01911 R008881 (gi:26249408) hlyB (c3573) - Hemolysin B [Escherichia coli

str. CFT073 (UPEC)]

236 1.63E-20 218 30% 50% DENG_01920 R010050 (gi:68536864) fagC (jk1774) - putative iron ABC transport

1243 3.80E-137 298 79% 88% DENG_01925 R003327 (gi:71904548) hasC (M28_Spy1886) - UTP-glucose-1-

phosphate uridylyltransferase [Streptococcus pyogenes str.

MGAS6180 (serotype M28)]

668 1.66E-70 265 51% 71% DENG_01927 R004221 (gi:46908654) lgt (LMOf2365_2455) - prolipoprotein

diacylglyceryl transferase [Listeria monocytogenes str. F2365

(serovar 4b)]

302 3.93E-28 247 31% 55% DENG_01934 R009908 (gi:68248710) hitC (NTHI0180) - iron-utilization ATP-

binding protein hFbpC [Haemophilus influenzae str. 86-

028NP (nontypeable)]

283 7.81E-26 241 32% 50% DENG_01935 R010047 (gi:68536376) ciuD (jk1293) - putative iron ABC transport

NCCP11945]

1140 1.33E-124 772 37% 54% DENG_01944 R005637 (gi:120404141) secA2 (Mvan_3162) - SecA DEAD domain

protein [Mycobacterium vanbaalenii str. PYR-1] 308 7.75E-29 261 33% 51% DENG_01953 R008022 (gi:83268968) dhbA (BAB2_0012) - Short-chain

dehydrogenase/reductase SDR:Blood group Rhesus C/E and

D polypeptide:Glucose/ribitol dehydrogenase [Brucella

melitensis str. 2308 (biovar Abortus) chromosome II]

127 4.79E-08 88 33% 55% DENG_01962 R007589 (gi:33594847) wbmQ (BPP0128) - putative formyl transferase

[Bordetella parapertussis str. 12822]

119 1.53E-06 185 26% 39% DENG_01964 R007616 (gi:33599134) wbmC (BB0142) - putative glutamine

amidotransferase [Bordetella bronchiseptica str. RB50]

132 2.13E-08 220 24% 45% DENG_01968 R005738 (gi:118471351) purC (MSMEG_5841) -

phosphoribosylaminoimidazole-succinocarboxamide synthase

[Mycobacterium smegmatis str. MC2 155]

256 6.94E-22 222 35% 52% DENG_01981 R012850 (gi:29375407) EF0818 - polysaccharide lyase, family 8

269 3.25E-24 278 28% 49% DENG_01992 R013806 (gi:157415661) C8J_1342 - hypothetical protein

[Campylobacter jejuni str. 81116 (NCTC11828)]

306 1.60E-28 256 32% 50% DENG_01993 R016005 (gi:194100117) lgtC (NGK_2632) - LgtC [Neisseria

gonorrhoeae str. NCCP11945]

1484 4.11E-165 284 99% 99% DENG_01999 R012849 (gi:29376361) sprE (EF1817) - serine proteinase, V8 family

2673 0 509 99% 99% DENG_02000 R012848 (gi:29376362) gelE (EF1818) - coccolysin [Enterococcus

faecalis str. V583]

1528 4.02E-170 301 99% 100% DENG_02001 R012853 (gi:29376363) fsrC (EF1820) - histidine kinase, putative

plasmid pSD1_197]

337 1.09E-32 113 56% 74% DENG_02015 R020282 (gi:387873860) panD (W7S_02270) - aspartate alpha-

decarboxylase [Mycobacterium intracellulare str. MOTT36Y]

527 3.96E-54 280 42% 58% DENG_02016 R020274 (gi:315446244) panC (Mspyr1_47470) - pantothenate

synthetase [Mycobacterium gilvum str. Spyr1]

141 3.86E-09 286 22% 45% DENG_02021 R004246 (gi:16800483) lisK (lin1415) - two-component sensor

histidine kinase [Listeria innocua str. Clip11262 (serovar 6a)]

299 7.07E-28 224 34% 57% DENG_02022 R006270 (gi:118473019) mprA (MSMEG_5488) - DNA-binding

response regulator [Mycobacterium smegmatis str. MC2 155]

289 1.20E-26 212 35% 55% DENG_02026 R019136 (gi:169629347) irtB (MAB_2261c) - ABC transporter ATP-

binding protein [Mycobacterium abscessus str. ATCC 19977]

248 1.18E-21 117 46% 62% DENG_02033 R015696 (gi:217965324) iap/cwhA (LMHCC_2049) - invasion

associated secreted endopeptidase [Listeria monocytogenes

str. HCC23 (serotype 4a)]

116 8.59E-06 340 27% 41% DENG_02056 R010009 (gi:38234767) spaG (DIP2227) - probable surface-anchored fimbrial subunit [Corynebacterium diphtheriae str. NCTC

13129 (biotype gravis)]

153 2.32E-10 333 25% 41% DENG_02083 R014972 (gi:170719107) rfaE (HSM_0925) - rfaE bifunctional protein

62:z4,z23:--)]

188 1.83E-14 261 23% 42% DENG_02104 R009618 (gi:68248881) lpt6 (NTHI0383) - PE-tn-6--

lipooligosaccharide phosphorylethanolamine transferase

[Haemophilus influenzae str. 86-028NP (nontypeable)]

291 3.51E-26 255 35% 50% DENG_02115 R004915 (gi:59712463) flrA (VF1856) - FlrA; sigma-54-dependent

transcriptional activator [Vibrio fischeri str. ES114

chromosome I]

1847 0 433 83% 88% DENG_02118 R003028 (gi:15903080) eno (spr1036) - phosphopyruvate hydratase

[Streptococcus pneumoniae str. R6]

1420 1.30E-157 333 80% 87% DENG_02122 R002805 (gi:15903867) plr/gapA (spr1825) - glyceraldehyde-3-

phosphate dehydrogenase [Streptococcus pneumoniae str. R6]

1598 9.09E-178 717 42% 64% DENG_02132 R006335 (gi:118471771) relA (MSMEG_2965) - GTP

pyrophosphokinase [Mycobacterium smegmatis str. MC2

130 8.10E-09 63 44% 70% DENG_02147 R016497 (gi:187732466) gspG (SbBS512_E3409) - general secretion

pathway protein GspG [Shigella boydii str. CDC 3083-94

(serotype 18)]

140 4.21E-09 356 21% 43% DENG_02148 R006852 (gi:52841753) pilC (lpg1523) - (type IV) pilus assembly

protein PilC [Legionella pneumophila str. Philadelphia 1]

357 2.68E-34 274 31% 55% DENG_02149 R004381 (gi:59710969) mshE (VF0362) - type 4 fimbrial assembly

protein PilB [Vibrio fischeri str. ES114 chromosome I]

306 1.45E-28 208 38% 60% DENG_02153 R003222 (gi:25010705) cylA (gbs0649) - hypothetical protein

231 3.11E-19 242 30% 52% DENG_02155 R014153 (gi:15925989) essC (SA0276) - hypothetical protein

[Staphylococcus aureus str. N315]

431 1.39E-42 494 27% 48% DENG_02160 R008942 (gi:117624159) ybtQ (APECO1_1055) - putative ABC

transporter protein [Escherichia coli str. O1 (APEC)]

118 1.24E-06 99 29% 55% DENG_02164 R000774 (gi:51593918) virF/lcrF (pYV0076) - lcrF, virF; putative

thermoregulatory protein [Yersinia pseudotuberculosis str.

IP32953 (serotype I) plasmid pYV]

211 3.28E-17 339 26% 43% DENG_02169 R007265 (gi:54294213) lbtB (lpl1278) - hypothetical protein

152 1.95E-10 227 26% 45% DENG_02174 R012045 (gi:148546880) pvdN (Pput_1642) - aminotransferase, class V

[Pseudomonas putida str. F1] 491 4.52E-50 251 38% 63% DENG_02176 R009452 (gi:110805357) sitB (SFV_1378) - Iron transport protein,

ATP-binding component [Shigella flexneri str. 8401 (serotype

511 3.15E-52 278 39% 63% DENG_02177 R008987 (gi:91210364) sitC (UTI89_C1337) - SitC protein

[Escherichia coli str. UTI89 (UPEC)]

1628 0 308 100% 100% DENG_02178 R012846 (gi:29376585) efaA (EF2076) - endocarditis specific antigen

178 2.88E-13 201 27% 49% DENG_02179 R010038 (gi:62389290) hmuV (cg0469) - cobalamin/Fe3+-

siderophores transport system, ATPase component

NCCP11945]

151 4.35E-10 168 30% 43% DENG_02192 R007616 (gi:33599134) wbmC (BB0142) - putative glutamine

amidotransferase [Bordetella bronchiseptica str. RB50]

291 2.21E-26 230 30% 52% DENG_02194 R009428 (gi:110804579) fepC (SFV_0536) - ATP-binding component

of ferric enterobactin transport [Shigella flexneri str. 8401

(serotype 5b)]

879 1.09E-94 446 46% 61% DENG_02196 R009851 (gi:148826007) mrsA/glmM (CGSHiEE_04920) - predicted

phosphomannomutase [Haemophilus influenzae str. PittEE

(nontypeable)]

737 3.53E-78 463 37% 55% DENG_02201 R019015 (gi:253798714) glnA1 (TBMG_01760) - glutamine

synthetase glnA1 [Mycobacterium tuberculosis str. KZN

469 2.37E-47 330 37% 55% DENG_02208 R001468 (gi:29144602) tviC (t4351) - Vi polysaccharide biosynthesis

protein, epimerase [Salmonella enterica str. Ty2 (serovar

Typhi)]

816 2.27E-87 463 38% 60% DENG_02213 R003313 (gi:55823026) epsM (str1076) - exopolysaccharide

biosynthesis protein [Streptococcus thermophilus str.

CNRZ1066 (nonpathogenic)]

179 8.11E-14 245 28% 47% DENG_02215 R012868 (gi:29376985) cpsC (EF2493) - teichoic acid biosynthesis

protein, putative [Enterococcus faecalis str. V583]

294 5.96E-27 369 29% 47% DENG_02217 R012868 (gi:29376985) cpsC (EF2493) - teichoic acid biosynthesis

protein, putative [Enterococcus faecalis str. V583]

442 3.99E-44 217 44% 62% DENG_02218 R003455 (gi:146320426) SSU98_0579 - Glycosyltransferases involved

in cell wall biogenesis [Streptococcus suis str. 98HAH33]

400 2.54E-39 314 34% 54% DENG_02219 R003373 (gi:55823030) epsI (str1080) - exopolysaccharide biosynthesis

protein, sugar transferase [Streptococcus thermophilus str.

121 9.30E-08 51 47% 65% DENG_02222 R009796 (gi:16273440) licD (HI1540) - lic-1 operon protein

[Haemophilus influenzae str. Rd KW20 (serotype d)]

431 5.06E-43 255 38% 57% DENG_02223 R009690 (gi:16272808) kfiC (HI0868) - hypothetical protein

[Haemophilus influenzae str. Rd KW20 (serotype d)] 403 1.77E-39 376 31% 49% DENG_02224 R005081 (gi:28901258) cpsA (VPA1403) - putative capsular

polysaccharide biosynthesis glycosyltransferase [Vibrio

parahaemolyticus str. RIMD 2210633 chromosome II]

201 9.09E-16 225 29% 49% DENG_02227 R015081 (gi:170025397) YPK_3180 - glycosyl transferase family 2

[Yersinia pseudotuberculosis str. YPIII (serotype O:3)]

200 1.63E-15 122 37% 57% DENG_02228 R003373 (gi:55823030) epsI (str1080) - exopolysaccharide biosynthesis

protein, sugar transferase [Streptococcus thermophilus str.

537 4.70E-55 309 36% 61% DENG_02229 R003512 (gi:55823379) rgpD (str1469) - polysaccharide ABC

transporter ATP-binding protein [Streptococcus thermophilus

str. CNRZ1066 (nonpathogenic)]

275 6.26E-25 243 28% 52% DENG_02230 R012860 (gi:29376977) cpsK (EF2485) - ABC transporter, permease

protein [Enterococcus faecalis str. V583]

190 8.37E-16 117 38% 63% DENG_02233 R003464 (gi:125718326) SSA_1515 - hypothetical protein

[Streptococcus sanguinis str. SK36]

799 8.49E-86 241 61% 79% DENG_02234 R003526 (gi:116628179) STER_1440 - Glycosyltransferase involved in

cell wall biogenesis [Streptococcus thermophilus str. LMD-9

(nonpathogenic)]

925 2.82E-100 277 62% 77% DENG_02235 R003539 (gi:55821460) rmlD (stu1483) - dTDP-4-keto-L-rhamnose

reductase [Streptococcus thermophilus str. LMG 18311

(nonpathogenic)]

1512 3.03E-168 338 81% 91% DENG_02236 R003509 (gi:55821249) rmlB (stu1242) - dTDP-glucose-4,6-

dehydratase [Streptococcus thermophilus str. LMG 18311

(nonpathogenic)]

463 5.37E-47 181 52% 67% DENG_02237 R005077 (gi:37678487) rmlC (VV0303) - dTDP-6-deoxy-D-xylo-4-

hexulose-3,5-epimerase [Vibrio vulnificus str. YJ016

chromosome I]

1233 5.76E-136 288 80% 88% DENG_02238 R014655 (gi:157151373) rfbA-1 (SGO_1009) - glucose-1-phosphate

thymidylyltransferase [Streptococcus gordonii str. Challis

(substr. CH1)]

298 1.11E-27 219 35% 54% DENG_02239 R003379 (gi:116516251) cps2F (SPD_0321) - glycosyl transferase,

group 2 family protein [Streptococcus pneumoniae str. D39

(serotype 2)]

982 1.03E-106 372 52% 72% DENG_02242 R014665 (gi:157150246) SGO_1723 - RgpG [Streptococcus gordonii

207 5.33E-17 276 25% 43% DENG_02254 R011859 (gi:152986974) phzF2 (PSPA7_3380) - probable phenazine

biosynthesis protein [Pseudomonas aeruginosa str. PA7]

151 3.11E-10 133 29% 48% DENG_02267 R019282 (gi:183984499) mprA (MMAR_4529) - two component

response transcriptional regulatory protein MprA

210 5.85E-17 200 29% 50% DENG_02268 R011299 (gi:66043335) algZ (Psyr_0064) - Histidine kinase internal

region [Pseudomonas syringae str. B728a (pv. syringae)]

591 3.54E-61 567 30% 50% DENG_02277 R009588 (gi:33152665) msbA (HD1630) - ABC transporter ATP-

binding protein MsbA [Haemophilus ducreyi str. 35000HP] 774 2.09E-82 604 35% 53% DENG_02278 R009585 (gi:68248611) msbA (NTHI0072) - lipid A export ATP-

(nontypeable)]

214 2.19E-17 265 29% 48% DENG_02303 R012527 (gi:31544430) tuf (MGA_1033) - elongation factor Tu

[Mycoplasma gallisepticum str. R]

1307 5.14E-144 719 41% 60% DENG_02306 R016359 (gi:218888835) clpV1 (PLES_00911) - putative ClpA/B-type

chaperone [Pseudomonas aeruginosa str. LESB58]

295 5.92E-27 229 32% 55% DENG_02332 R015367 (gi:167032166) mucP (PputGB1_1153) - membrane-

associated zinc metalloprotease [Pseudomonas putida str. GB-

168 2.62E-12 409 23% 38% DENG_02345 R012047 (gi:70731444) pvdN (PFL_4088) - aminotransferase, class V

[Pseudomonas fluorescens str. Pf-5]

222 8.41E-19 285 31% 48% DENG_02378 R005758 (gi:108797648) proC (Mmcs_0668) - pyrroline-5-carboxylate

reductase [Mycobacterium sp. str. MCS]

815 3.87E-87 583 36% 53% DENG_02379 R009880 (gi:33152559) manB (HD1507) - probable

phosphomannomutase [Haemophilus ducreyi str. 35000HP]

255 3.93E-22 273 32% 49% DENG_02419 R012533 (gi:26553484) tuf (MYPE320) - elongation factor Tu

[Mycoplasma penetrans str. HF-2]

142 3.09E-09 197 26% 43% DENG_02420 R008669 (gi:15834525) fimB (ECs5271) - FimB [Escherichia coli str.

Sakai (EHEC O157:H7)]

218 7.13E-18 130 38% 58% DENG_02426 R012532 (gi:42560712) tuf (MSC_0160) - translation elongation factor

Tu [Mycoplasma mycoides str. PG1]

256 1.46E-22 118 48% 66% DENG_02428 R015696 (gi:217965324) iap/cwhA (LMHCC_2049) - invasion

associated secreted endopeptidase [Listeria monocytogenes

str. HCC23 (serotype 4a)]

152 1.83E-10 235 27% 41% DENG_02443 R012592 (gi:42561509) epsG (MSC_0993) - Glycosyltransferase

[Mycoplasma mycoides str. PG1] 153 5.62E-10 594 23% 36% DENG_02445 R010009 (gi:38234767) spaG (DIP2227) - probable surface-anchored

fimbrial subunit [Corynebacterium diphtheriae str. NCTC

13129 (biotype gravis)]

1351 9.91E-150 266 100% 100% DENG_02464 R012869 (gi:29376986) cpsB (EF2494) - phosphatidate

cytidylyltransferase [Enterococcus faecalis str. V583]

1449 4.34E-161 271 100% 100% DENG_02465 R012870 (gi:29376987) cpsA (EF2495) - undecaprenyl diphosphate

synthase [Enterococcus faecalis str. V583]

143 1.95E-09 305 24% 38% DENG_02505 R012047 (gi:70731444) pvdN (PFL_4088) - aminotransferase, class V

[Pseudomonas fluorescens str. Pf-5]

837 6.20E-90 320 50% 68% DENG_02528 R012465 (gi:118480308) manA (BALH_4769) - mannose-6-phosphate

isomerase [Bacillus thuringiensis str. Al Hakam]

(nontypeable)]

397 9.06E-39 385 29% 51% DENG_02545 R010770 (gi:66046683) fliI (Psyr_3454) - flagellum-specific ATP

synthase [Pseudomonas syringae str. B728a (pv. syringae)]

393 3.45E-38 327 34% 50% DENG_02548 R020062 (gi:332163582) yscN (YE105_P0022) - type III secretion

system ATPase [Yersinia enterocolitica str. 105.5R(r) (subsp.

palearctica) plasmid 105.5R(r)p]

62:z4,z23:--)]

126 1.07E-07 194 27% 45% DENG_02565 R006266 (gi:41407014) mprA (MAP0916) - hypothetical protein

[Mycobacterium avium str. K-10 (subsp. paratuberculosis)]

1939 0 541 71% 84% DENG_02566 R008507 (gi:150015219) groEL (Cbei_0329) - chaperonin GroEL

[Clostridium beijerinckii str. NCIMB 8052]

171 2.19E-12 206 28% 46% DENG_02573 R010037 (gi:145294509) hmuV (cgR_0464) - hypothetical protein

110 9.07E-06 237 23% 46% DENG_02586 R014990 (gi:170717477) hitB (HSM_1249) - binding-protein-

dependent transport systems inner membrane component

[Haemophilus somnus str. 2336] 538 3.00E-55 346 34% 56% DENG_02587 R009910 (gi:113460924) hitC (HS_0781) - iron(III) ABC transporter,

114 2.03E-06 133 31% 47% DENG_02607 R007329 (gi:54294502) relA (lpl1571) - GTP pyrophosphokinase

(nontypeable)]

400 6.85E-39 300 36% 59% DENG_02626 R004169 (gi:16802477) inlA (lmo0433) - Internalin A [Listeria

10987]

SBW25]

129 1.29E-07 397 20% 43% DENG_02653 R009344 (gi:24111749) gtr (SF0307) - putative glucosyl tranferase II

[Shigella flexneri str. 301 (serotype 2a)]

158 4.94E-11 219 26% 48% DENG_02660 R010053 (gi:62389396) fagC (cg0589) - ABC TRANSPORTER,

NUCLEOTIDE BINDING/ATPASE PROTEIN

1002 6.93E-109 535 39% 60% DENG_02665 R004197 (gi:46908430) oppA (LMOf2365_2229) - oligopeptide ABC

monocytogenes str. F2365 (serovar 4b)]

486 2.41E-49 286 39% 56% DENG_02675 R012864 (gi:29376981) cpsG (EF2489) - MurB family protein

185 2.26E-14 326 25% 45% DENG_02677 R010461 (gi:116051142) PA14_23420 - putative zinc-binding

dehydrogenase [Pseudomonas aeruginosa str. UCBPP-PA14]

314 9.54E-30 167 39% 59% DENG_02682 R006083 (gi:41407687) ahpC (MAP1589c) - AhpC [Mycobacterium

avium str. K-10 (subsp. paratuberculosis)]

1089 3.45E-119 335 62% 78% DENG_02684 R004191 (gi:116872329) lplA1 (lwe0911) - lipoyltransferase and

lipoate-protein ligase family protein [Listeria welshimeri str.

SLCC5334 (serovar 6b)]

349 2.76E-33 294 30% 49% DENG_02690 R011174 (gi:146283212) algI (PST_2877) - alginate O-acetylation

protein AlgI [Pseudomonas stutzeri str. A1501]

592 2.44E-61 496 32% 50% DENG_02691 R012088 (gi:104782280) pvdI (PSEEN3229) - pyoverdine sidechain

peptide synthetase [Pseudomonas entomophila str. L48]

NCCP11945]

288 1.37E-26 214 34% 53% DENG_02701 R005994 (gi:118469265) irtB (MSMEG_6553) - ABC transporter ATP-

binding protein [Mycobacterium smegmatis str. MC2 155]

NCCP11945] 1144 1.62E-125 328 63% 78% DENG_02728 R012354 (gi:118480305) galE (BALH_4766) - UDP-glucose 4-

epimerase [Bacillus thuringiensis str. Al Hakam]

234 5.22E-20 220 25% 53% DENG_02751 R007529 (gi:115422956) bvgS (BAV1876) - virulence sensor protein

[Bordetella avium str. 197N]

365 1.87E-35 229 36% 60% DENG_02752 R015621 (gi:163844109) bvrR (BSUIS_A1933) - Transcriptional

regulatory protein chvI [Brucella suis str. ATCC 23445

chromosome I]

326 2.46E-31 144 48% 65% DENG_02776 R015527 (gi:163843417) fabZ (BSUIS_A1200) - beta-hydroxyacyl-

(acyl-carrier-protein) dehydratase FabZ [Brucella suis str.

ATCC 23445 chromosome I]

629 1.11E-65 412 36% 54% DENG_02778 R005650 (gi:118467655) kasB (MSMEG_4328) - 3-oxoacyl-[acyl-

carrier-protein] synthase 2 [Mycobacterium smegmatis str.

MC2 155]

346 4.31E-33 298 34% 48% DENG_02780 R005254 (gi:120404102) ppsE (Mvan_3123) - beta-ketoacyl synthase

[Mycobacterium vanbaalenii str. PYR-1]

109 1.96E-06 73 37% 63% DENG_02783 R007841 (gi:23501360) acpXL (BR0459) - acyl carrier protein

[Brucella suis str. 1330 chromosome I]

153 1.38E-10 303 24% 42% DENG_02788 R002485 (gi:73661374) SSP0065 - putative glycosyl transferase

[Staphylococcus saprophyticus str. ATCC 15305]

121 5.64E-07 142 28% 51% DENG_02789 R008198 (gi:118474821) CFF8240_1409 - WabG [Campylobacter fetus

str. 82-40 (subsp. fetus)]

503 1.26E-51 204 49% 70% DENG_02797 R002820 (gi:15900665) slrA (SP_0771) - peptidyl-prolyl cis-trans

isomerase, cyclophilin-type [Streptococcus pneumoniae str.

TIGR4 (serotype 4)]

654 8.08E-69 309 42% 66% DENG_02809 R009341 (gi:24111748) gtrB (SF0306) - putative bactoprenol glucosyl

transferase [Shigella flexneri str. 301 (serotype 2a)]

372 2.25E-36 211 39% 61% DENG_02812 R020549 (gi:379764654) devR/dosR (OCQ_52190) - two-component

system response regulator [Mycobacterium intracellulare str.

MOTT 64]

189 6.25E-15 204 29% 50% DENG_02813 R006317 (gi:118468427) devS (MSMEG_5241) - GAF family protein

1115 3.83E-122 365 57% 75% DENG_02819 R003440 (gi:15900286) SP_0357 - UDP-N-acetylglucosamine-2-

epimerase [Streptococcus pneumoniae str. TIGR4 (serotype

672 1.62E-70 576 31% 52% DENG_02822 R009587 (gi:148827214) msbA (CGSHiGG_02810) - lipid A export ATP-binding protein MsbA [Haemophilus influenzae str.

PittGG (nontypeable)]

169 6.91E-13 115 37% 51% DENG_02839 R003398 (gi:55821111) eps9 (stu1099) - exopolysaccharide

biosynthesis protein [Streptococcus thermophilus str. LMG

18311 (nonpathogenic)]

117 1.76E-06 302 24% 41% DENG_02844 R009770 (gi:33152291) rfaE (HD1182) - ADP-heptose synthase

[Haemophilus ducreyi str. 35000HP]

156 4.60E-11 242 29% 44% DENG_02846 R019097 (gi:333990246) mbtJ (JDM601_1606) - acetyl hydrolase MbtJ

136 1.20E-08 334 21% 40% DENG_02856 R011931 (gi:71733435) PSPPH_4303 - L-arginine:lysine

amidinotransferase, putative [Pseudomonas syringae str.

1448A (pv. phaseolicola)]

chromosome I]

NCCP11945]

196 1.35E-15 300 27% 45% DENG_02893 R015727 (gi:217963784) bsh (LMHCC_0491) - choloylglycine

hydrolase (conjugated bile acidhydrolase) (cbah) (bile salt

hydrolase) [Listeria monocytogenes str. HCC23 (serotype 4a)]

743 1.49E-78 894 27% 50% DENG_02904 R017400 (gi:194737976) mgtB (SeSA_A3969) - magnesium-

translocating P-type ATPase [Salmonella enterica str.

CVM19633 (serovar Schwarzengrund)]

150 7.41E-11 156 26% 46% DENG_02913 R019223 (gi:169628453) sigE (MAB_1362) - alternative RNA

polymerase sigma factor [Mycobacterium abscessus str.

ATCC 19977]

7177 0 1372 99% 99% DENG_02916 R012851 (gi:29377483) EF3023 - polysaccharide lyase, family 8

1021 4.06E-111 421 54% 69% DENG_02919 R002974 (gi:76788422) htrA/degP (SAK_2135) - serine peptidase HtrA

1143 3.64E-125 539 42% 62% DENG_02926 R004199 (gi:116873629) oppA (lwe2213) - periplasmic oligopeptide-

binding protein [Listeria welshimeri str. SLCC5334 (serovar

578 3.58E-60 236 48% 65% DENG_02942 R002826 (gi:24379545) srtA (SMU.1113) - putative sortase

[Streptococcus mutans str. UA159]

169 4.86E-13 149 30% 48% DENG_02945 R005042 (gi:59710771) wzb (VF0164) - Protein tyrosine phosphatase

[Vibrio fischeri str. ES114 chromosome I] 880 1.19E-94 539 35% 58% DENG_02967 R015707 (gi:217963642) oppA (LMHCC_0346) - oligopeptide ABC

694 1.86E-73 321 47% 64% DENG_02968 R003260 (gi:15901700) piuA (SP_1872) - iron-compound ABC

transporter, iron-compound-binding protein [Streptococcus

pneumoniae str. TIGR4 (serotype 4)]

712 1.37E-75 251 49% 73% DENG_02970 R004671 (gi:28900515) vctC (VPA0660) - iron(III) ABC transporter,

ATP-binding protein [Vibrio parahaemolyticus str. RIMD

2210633 chromosome II]

495 2.40E-50 315 38% 60% DENG_02971 R004668 (gi:37676279) vctG (VVA0619) - catechol siderophore ABC

transporter, permease protein [Vibrio vulnificus str. YJ016

chromosome II]

714 9.75E-76 317 43% 72% DENG_02972 R004660 (gi:147672165) vctD (VC0395_1000) - vibriobactin and

enterobactin ABC transporter, permease protein [Vibrio

cholerae str. O395 chromosome I]

178 2.19E-13 202 27% 47% DENG_02982 R004031 (gi:32266642) flhF (HH1143) - flagellar biosynthesis protein

[Helicobacter hepaticus str. ATCC 51449]

154 1.40E-11 68 47% 68% DENG_02993 R007841 (gi:23501360) acpXL (BR0459) - acyl carrier protein

[Brucella suis str. 1330 chromosome I]

553 3.40E-57 242 46% 71% DENG_02998 R004251 (gi:116871464) agrA (lwe0042) - 2-components response

regulator protein, AlgR/VirR/ComE type [Listeria welshimeri

str. SLCC5334 (serovar 6b)]

436 2.54E-43 412 29% 54% DENG_02999 R004253 (gi:46906281) agrC (LMOf2365_0059) - accessory gene

regulator protein C [Listeria monocytogenes str. F2365

(serovar 4b)]

NCCP11945]

468 8.71E-47 318 36% 51% DENG_03006 R016329 (gi:229593375) ppkA (PFLU6010) - putative serine/threonine

protein kinase [Pseudomonas fluorescens str. SBW25]

589 2.39E-61 243 49% 69% DENG_03007 R004208 (gi:16803861) stp (lmo1821) - hypothetical protein [Listeria

288 2.26E-26 277 29% 51% DENG_03010 R018197 (gi:118470693) fxbA (MSMEG_0014) - Formyl transferase

162 3.10E-12 158 29% 47% DENG_03073 R019236 (gi:333991577) sigH (JDM601_2937) - RNA polymerase

sigma-E factor (sigma- 24) SigH (RpoE) [Mycobacterium sp.

str. JDM601]

129 8.25E-08 100 29% 47% DENG_03085 R019092 (gi:169631131) mbtJ (MAB_4052c) - putative lipase/esterase

[Mycobacterium abscessus str. ATCC 19977] 117 7.37E-07 80 38% 51% DENG_03086 R004611 (gi:147674293) vibB (VC0395_A0300) - vibriobactin-

specific isochorismatase [Vibrio cholerae str. O395

chromosome II]

282 8.00E-26 255 31% 51% DENG_03090 R011283 (gi:152989087) algR (PSPA7_6007) - alginate biosynthesis

regulatory protein AlgR [Pseudomonas aeruginosa str. PA7]

246 4.51E-21 209 33% 50% DENG_03091 R011301 (gi:146305319) algZ (Pmen_0278) - histidine kinase internal

region [Pseudomonas mendocina str. ymp]

333 1.08E-31 218 37% 59% DENG_03094 R003702 (gi:15793812) fbpC (NMA0842) - iron-uptake permease ATP-

binding protein [Neisseria meningitidis str. Z2491 (serogroup

554 7.15E-57 317 40% 62% DENG_03101 R002679 (gi:125718778) lmb (SSA_1990) - Zn-porter lipoprotein,

putative [Streptococcus sanguinis str. SK36]

111 6.00E-06 231 27% 47% DENG_03103 R012860 (gi:29376977) cpsK (EF2485) - ABC transporter, permease

protein [Enterococcus faecalis str. V583]

425 3.55E-42 293 34% 54% DENG_03104 R020192 (gi:406031303) ddrA (MIP_04588) - Daunorubicin resistance

ATP-binding protein drrA [Mycobacterium indicus pranii str.

MTCC 9506]

chromosome I]

330 1.08E-30 256 38% 52% DENG_03110 R002764 (gi:116516664) cbpD (SPD_2028) - choline binding protein D

[Streptococcus pneumoniae str. D39 (serotype 2)]

139 1.93E-08 452 23% 41% DENG_03114 R009617 (gi:16272233) lpt6 (HI0275) - hypothetical protein

[Haemophilus influenzae str. Rd KW20 (serotype d)]

172 1.95E-13 148 28% 51% DENG_03117 R003821 (gi:32265709) napA (HH0210) - starvation-inducible DNA-

binding protein Dps [Helicobacter hepaticus str. ATCC 51449]

121 2.30E-07 158 28% 46% DENG_03121 R015208 (gi:170723699) pilD (PputW619_4538) - Prepilin peptidase

[Pseudomonas putida str. W619]

10987]

264 7.34E-24 188 32% 55% DENG_03154 R009603 (gi:148825461) orfM (CGSHiEE_01765) - putative

deoxyribonucleotide triphosphate pyrophosphatase

[Haemophilus influenzae str. PittEE (nontypeable)]

1216 2.07E-133 840 37% 57% DENG_03171 R015399 (gi:170721686) clpV1 (PputW619_2505) - type VI secretion

ATPase, ClpV1 family [Pseudomonas putida str. W619]

385 9.66E-38 229 37% 60% DENG_03180 R015621 (gi:163844109) bvrR (BSUIS_A1933) - Transcriptional

regulatory protein chvI [Brucella suis str. ATCC 23445

chromosome I]

316 1.71E-29 275 29% 50% DENG_03181 R019259 (gi:183984909) phoR (MMAR_4941) - two-component

system response phosphate sensor kinase, PhoR

133 1.70E-08 123 34% 46% DENG_03189 R012425 (gi:30023309) BC5277 - Tyrosine-protein kinase (capsular polysaccharide biosynthesis) [Bacillus cereus str. ATCC

14579]

292 6.83E-27 261 33% 51% DENG_03201 R003213 (gi:25010702) cylG (gbs0646) - hypothetical protein

261 2.13E-23 230 30% 51% DENG_03223 R019253 (gi:169627776) phoP (MAB_0673) - putative DNA-binding

response regulator PhoP [Mycobacterium abscessus str. ATCC

19977]

Note: a:Score: The score of the target protein used to blast. b:E-value: stastistic value to blast analysis. c:HSP-Len: the highest protein length which used to be blasted. d:Ident: the identity of the amino acid sequence compared with the homogeneous protein in VFDB database. e:Similarity: the similarityof the amino acid sequence compared with the homogeneous protein in VFDB database. f: Query- name: The numbers similar to the protein in E.fecalis Deng1. g:Hit-Name: the number of the most suitable protein in the VFDB database used to analyze the target protein. For example, R010038 represents the number of the protein used to compared with DENG_0001. h:Description: the specific description of the protein used in VFDB database( http://www.mgc.ac.cn/VFs/main.htm) including the abbreviation of the virulent factors, the number of genebank ID in NCBI data, base locus_tag, and the bacteria strain name which also express this protein.