Triterpene Biosynthesis in Plants
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
The Arabidopsis KH-Domain RNA-Binding Protein ESR1 Functions in Components of Jasmonate Signalling, Unlinking Growth Restraint and Resistance to Stress
RESEARCH ARTICLE The Arabidopsis KH-Domain RNA-Binding Protein ESR1 Functions in Components of Jasmonate Signalling, Unlinking Growth Restraint and Resistance to Stress Louise F. Thatcher1*, Lars G. Kamphuis1,2, James K. Hane1¤a, Luis Oñate-Sánchez1¤b, Karam B. Singh1,2 1 CSIRO Agriculture Flagship, Centre for Environment and Life Sciences, Wembley, Western Australia, Australia, 2 The Institute of Agriculture, The University of Western Australia, Crawley, Western Australia, Australia a11111 ¤a Current address: Curtin Institute for Computation and Centre for Crop and Disease Management, Department of Environment & Agriculture, Curtin University, Bentley, Western Australia, Australia ¤b Current address: Centro de Biotecnología y Genómica de Plantas, UPM-INIA, and E.T.S.I. Agrónomos, Universidad Politécnica de Madrid, Campus de Montegancedo, Pozuelo de Alarcón, Madrid, Spain * [email protected] OPEN ACCESS Abstract Citation: Thatcher LF, Kamphuis LG, Hane JK, Oñate-Sánchez L, Singh KB (2015) The Arabidopsis Glutathione S-transferases (GSTs) play important roles in the protection of cells against tox- KH-Domain RNA-Binding Protein ESR1 Functions in ins and oxidative damage where one Arabidopsis member, GSTF8, has become a com- Components of Jasmonate Signalling, Unlinking Growth Restraint and Resistance to Stress. PLoS monly used marker gene for early stress and defense responses. A GSTF8 promoter ONE 10(5): e0126978. doi:10.1371/journal. fragment fused to the luciferase reporter gene was used in a forward genetic screen for Ara- pone.0126978 bidopsis mutants with up-regulated GSTF8 promoter activity. This identified the esr1-1 (en- Academic Editor: Ramamurthy Mahalingam, hanced stress response 1) mutant which also conferred increased resistance to the fungal Oklahoma State University, UNITED STATES pathogen Fusarium oxysporum. -
Biosynthesis of New Alpha-Bisabolol Derivatives Through a Synthetic Biology Approach Arthur Sarrade-Loucheur
Biosynthesis of new alpha-bisabolol derivatives through a synthetic biology approach Arthur Sarrade-Loucheur To cite this version: Arthur Sarrade-Loucheur. Biosynthesis of new alpha-bisabolol derivatives through a synthetic biology approach. Biochemistry, Molecular Biology. INSA de Toulouse, 2020. English. NNT : 2020ISAT0003. tel-02976811 HAL Id: tel-02976811 https://tel.archives-ouvertes.fr/tel-02976811 Submitted on 23 Oct 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. THÈSE En vue de l’obtention du DOCTORAT DE L’UNIVERSITÉ DE TOULOUSE Délivré par l'Institut National des Sciences Appliquées de Toulouse Présentée et soutenue par Arthur SARRADE-LOUCHEUR Le 30 juin 2020 Biosynthèse de nouveaux dérivés de l'α-bisabolol par une approche de biologie synthèse Ecole doctorale : SEVAB - Sciences Ecologiques, Vétérinaires, Agronomiques et Bioingenieries Spécialité : Ingénieries microbienne et enzymatique Unité de recherche : TBI - Toulouse Biotechnology Institute, Bio & Chemical Engineering Thèse dirigée par Gilles TRUAN et Magali REMAUD-SIMEON Jury -
Friedelin Synthase from Maytenus Ilicifolia
www.nature.com/scientificreports OPEN Friedelin Synthase from Maytenus ilicifolia: Leucine 482 Plays an Essential Role in the Production of Received: 09 May 2016 Accepted: 20 October 2016 the Most Rearranged Pentacyclic Published: 22 November 2016 Triterpene Tatiana M. Souza-Moreira1, Thaís B. Alves1, Karina A. Pinheiro1, Lidiane G. Felippe1, Gustavo M. A. De Lima2, Tatiana F. Watanabe1, Cristina C. Barbosa3, Vânia A. F. F. M. Santos1, Norberto P. Lopes4, Sandro R. Valentini3, Rafael V. C. Guido2, Maysa Furlan1 & Cleslei F. Zanelli3 Among the biologically active triterpenes, friedelin has the most-rearranged structure produced by the oxidosqualene cyclases and is the only one containing a cetonic group. In this study, we cloned and functionally characterized friedelin synthase and one cycloartenol synthase from Maytenus ilicifolia (Celastraceae). The complete coding sequences of these 2 genes were cloned from leaf mRNA, and their functions were characterized by heterologous expression in yeast. The cycloartenol synthase sequence is very similar to other known OSCs of this type (approximately 80% identity), although the M. ilicifolia friedelin synthase amino acid sequence is more related to β-amyrin synthases (65–74% identity), which is similar to the friedelin synthase cloned from Kalanchoe daigremontiana. Multiple sequence alignments demonstrated the presence of a leucine residue two positions upstream of the friedelin synthase Asp-Cys-Thr-Ala-Glu (DCTAE) active site motif, while the vast majority of OSCs identified so far have a valine or isoleucine residue at the same position. The substitution of the leucine residue with valine, threonine or isoleucine in M. ilicifolia friedelin synthase interfered with substrate recognition and lead to the production of different pentacyclic triterpenes. -
Influences of Gravitational Intensity on the Transcriptional Landscape of Arabidopsis
Influences of Gravitational Intensity on the Transcriptional Landscape of Arabidopsis thaliana A dissertation presented to the faculty of the College of Arts and Sciences of Ohio University In partial fulfillment of the requirements for the degree Doctor of Philosophy Alexander D. Meyers May 2020 © 2020 Alexander D. Meyers. All Rights Reserved. 2 This dissertation titled Influences of Gravitational Intensity on the Transcriptional Landscape of Arabidopsis thaliana by ALEXANDER D. MEYERS has been approved for the Department of Molecular and Cellular Biology and the College of Arts and Sciences by Sarah E. Wyatt Professor of Environmental and Plant Biology Florenz Plassmann Dean, College of Arts and Sciences 3 Abstract MEYERS, ALEXANDER D, Ph.D., May 2020, Molecular and Cellular Biology Influences of Gravitational Intensity on the Transcriptional Landscape of Arabidopsis thaliana Director of Dissertation: Sarah E. Wyatt Plants use a myriad of environmental cues to inform their growth and development. The force of gravity has been a consistent abiotic input throughout plant evolution, and plants utilize gravity sensing mechanisms to maintain proper orientation and architecture. Despite thorough study, the specific mechanics behind plant gravity perception remain largely undefined or unproven. At the center of plant gravitropism are dense, specialized organelles called starch statoliths that sediment in the direction of gravity. Herein I describe a series of experiments in Arabidopsis that leveraged RNA sequencing to probe gravity response mechanisms in plants, utilizing reorientation in Earth’s 1g, fractional gravity environments aboard the International Space Station, and simulated fractional and hyper gravity environments within various specialized hardware. Seedlings were examined at organ-level resolution, and the statolith-deficient pgm-1 mutant was subjected to all treatments alongside wildtype seedlings in an effort to resolve the impact of starch statoliths on gravity response. -
Identification of Key Amino Acid Residues Determining Product Specificity of 2, 3-Oxidosqualene Cyclase in Siraitia Grosvenorii
catalysts Article Identification of Key Amino Acid Residues Determining Product Specificity of 2,3-Oxidosqualene Cyclase in Siraitia grosvenorii Jing Qiao, Jiushi Liu, Jingjing Liao, Zuliang Luo, Xiaojun Ma * and Guoxu Ma * Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100193, China; [email protected] (J.Q.); [email protected] (J.L.); [email protected] (J.L.); [email protected] (Z.L.) * Correspondence: [email protected] (X.M.); mgxfl[email protected] (G.M.); Tel.: +86-10-5783-3155 (X.M. & G.M.) Received: 25 October 2018; Accepted: 19 November 2018; Published: 22 November 2018 Abstract: Sterols and triterpenes are structurally diverse bioactive molecules generated through cyclization of linear 2,3-oxidosqualene. Based on carbocationic intermediates generated during the initial substrate preorganization step, oxidosqualene cyclases (OSCs) are roughly segregated into a dammarenyl cation group that predominantly catalyzes triterpenoid precursor products and a protosteryl cation group which mostly generates sterol precursor products. The mechanism of conversion between two scaffolds is not well understood. Previously, we have characterized a promiscuous OSC from Siraitia grosvenorii (SgCS) that synthesizes a novel cucurbitane-type triterpene cucurbitadienol as its main product. By integration of homology modeling, molecular docking and site-directed mutagenesis, we discover that five key amino acid residues (Asp486, Cys487, Cys565, Tyr535, and His260) may be responsible for interconversions between chair–boat–chair and chair–chair–chair conformations. The discovery of euphol, dihydrolanosterol, dihydroxyeuphol and tirucallenol unlocks a new path to triterpene diversity in nature. Our findings also reveal mechanistic insights into the cyclization of oxidosqualene into cucurbitane-type and lanostane-type skeletons, and provide a new strategy to identify key residues determining OSC specificity. -
生物合成薯蓣皂素的途径设计及关键酶分析 Chinese Journal of Biotechnology Apr
1178 生物工程学报 孙忠义 等/生物合成薯蓣皂素的途径设计及关键酶分析 Chinese Journal of Biotechnology http://journals.im.ac.cn/cjbcn Apr. 25, 2021, 37(4): 1178−1188 DOI: 10.13345/j.cjb.200389 ©2021 Chin J Biotech, All rights reserved ·综 述· 生物合成薯蓣皂素的途径设计及关键酶分析 1 1 2 1 孙忠义 ,赵鹏 ,葛喜珍 ,田平芳 1 北京化工大学 生命科学与技术学院,北京 100029 2 北京联合大学 生物化学工程学院,北京 100023 孙忠义, 赵鹏, 葛喜珍, 等. 生物合成薯蓣皂素的途径设计及关键酶分析. 生物工程学报, 2021, 37(4): 1178-1188. Sun ZY, Zhao P, Ge XZ, et al. Pathway design and key enzyme analysis of diosgenin biosynthesis. Chin J Biotech, 2021, 37(4): 1178–1188. 摘 要: 薯蓣皂素是一种天然甾体皂苷元,可作为数百种类固醇药物的前体,具有重要药用价值。目前工业生产 薯蓣皂素主要依赖化学提取法,因此该法依赖植物材料和耕地且对环境有害。随着代谢工程和合成生物学的发展, 生物合成法受到广泛关注。文中综述了生物合成薯蓣皂素的代谢途径和关键酶,并在酿酒酵母 Saccharomyces cerevisiae 中设计其异源合成途径,提出改造策略,以期为全生物合成薯蓣皂素提供有价值的参考。 关键词: 薯蓣皂素,生物合成途径,关键酶,异源表达 Pathway design and key enzyme analysis of diosgenin biosynthesis Zhongyi Sun1, Peng Zhao1, Xizhen Ge2, and Pingfang Tian1 1 College of Life Science and Technology, Beijing University of Chemical Technology, Beijing 100029, China 2 College of Biochemical Engineering, Beijing Union University, Beijing 100023, China Abstract: As a naturally occurring steroid sapogenin, diosgenin acts as the precursor of hundreds of steroid medicines, and thereby has important medicinal value. Currently, industrial production of diosgenin relies primarily on chemical extraction from plant materials. Clearly, this strategy shows drawbacks of excessive reliance on plant materials and farmland as well as environment pollution. Due to development of metabolic engineering and synthetic biology, bio-production of diosgenin has garnered plenty of attention. Although the biosynthetic pathways of diosgenin have not been completely identified, in this review, we outline the identified biosynthetic pathways and key enzymes. In particular, we suggest heterologous biosynthesis of diosgenin in Saccharomyces cerevisiae. -
Proquest Dissertations
RICE UNIVERSITY Investigation of Triterpene Biosynthesis in Arabidopsis thaliana by Mariya D. Kolesnikova A THESIS SUBMITTED IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE Doctor of Philosophy APPROVED, THESIS COMMITTEE: Seircni P. T. Matsuda, Professor, Department Chair Department of Chemistry Department of Biochemistry and Cell Biology JU- Ronald J. Parry, Professor Department of Chemistry Department of Biochemistry and Cell Biology UL Jonatnan Silberg, ^gs&tant Profasabr Department of Biochemistry and Cell Biology HOUSTON, TEXAS May 2008 UMI Number: 3362344 INFORMATION TO USERS The quality of this reproduction is dependent upon the quality of the copy submitted. Broken or indistinct print, colored or poor quality illustrations and photographs, print bleed-through, substandard margins, and improper alignment can adversely affect reproduction. In the unlikely event that the author did not send a complete manuscript and there are missing pages, these will be noted. Also, if unauthorized copyright material had to be removed, a note will indicate the deletion. UMI® UMI Microform 3362344 Copyright 2009 by ProQuest LLC All rights reserved. This microform edition is protected against unauthorized copying under Title 17, United States Code. ProQuest LLC 789 East Eisenhower Parkway P.O. Box 1346 Ann Arbor, Ml 48106-1346 ii ABSTRACT Investigation of Triterpene Biosynthesis in Arabidopsis thaliana By Mariya D. Kolesnikova This thesis describes functional characterization of three oxidosqualene cyclase genes (Atlg78955, At3g45130, and At4gl5340) from the model plant Arabidopsis thaliana that encode enzymes with novel catalytic functions. Oxidosqualene cyclases are a family of membrane proteins that convert the acyclic substrate oxidosqualene into polycyclic products with many chiral centers. The complex mechanistic pathways and relevant catalytic motifs can be elucidated through judicious applications of mutagenesis, heterologous expression in combination with a genome mining approach, and protein modeling. -
The Triforc Database: a Comprehensive Up-To-Date Resource
D586–D594 Nucleic Acids Research, 2018, Vol. 46, Database issue Published online 17 October 2017 doi: 10.1093/nar/gkx925 The TriForC database: a comprehensive up-to-date resource of plant triterpene biosynthesis Karel Miettinen1,2, Sabrina Inigo˜ 1,2, Lukasz Kreft3, Jacob Pollier1,2,ChristofDeBo3, Alexander Botzki3, Frederik Coppens1,2, Søren Bak4 and Alain Goossens1,2,* 1Ghent University, Department of Plant Biotechnology and Bioinformatics, 9052 Ghent, Belgium, 2VIB Center for Plant Systems Biology, 9052 Ghent, Belgium, 3VIB Bioinformatics Core, 9052 Ghent, Belgium and 4Plant Biochemistry Laboratory and Villum Research Center ‘Plant Plasticity’, Copenhagen Plant Science Center, Department of Plant and Environmental Sciences, University of Copenhagen, Copenhagen, Denmark Received August 14, 2017; Revised September 23, 2017; Editorial Decision September 26, 2017; Accepted October 03, 2017 ABSTRACT INTRODUCTION Triterpenes constitute a large and important class of Importance of triterpenes plant natural products with diverse structures and Triterpenes compose a diverse class of plant natural prod- functions. Their biological roles range from mem- ucts, both in structure and function. They comprise (i) pri- brane structural components over plant hormones mary metabolites such as the phytosterols, which are the to specialized plant defence compounds. Further- indispensable structural components of cell membranes, more, triterpenes have great potential for a vari- and hormones, such as brassinosteroids, and (ii) specialized ety of commercial applications such as vaccine ad- (also called secondary) metabolites with diverse biological juvants, anti-cancer drugs, food supplements and functions (1,2). The latter include among others defence agronomic agents. Their biosynthesis is carried out compounds with antimicrobial, antifungal, antiparasitic, through complicated, branched pathways by multiple insecticidal, anti-feedant and allelopathic activities (3)and leaf wax components (4). -
Plant Secondary Metabolism Linked Glycosyltransferases: an Update on Expanding Knowledge and Scopes
JBA-07035; No of Pages 26 Biotechnology Advances xxx (2016) xxx–xxx Contents lists available at ScienceDirect Biotechnology Advances journal homepage: www.elsevier.com/locate/biotechadv Research review paper Plant secondary metabolism linked glycosyltransferases: An update on expanding knowledge and scopes Pragya Tiwari a, Rajender Singh Sangwan a,b,NeelamS.Sangwana,⁎ a Department of Metabolic and Structural Biology, CSIR-Central Institute of Medicinal and Aromatic Plants (CSIR-CIMAP), P.O. CIMAP, Lucknow 226015,India b Center of Innovative and Applied Bioprocessing (CIAB), A National Institute under Department of Biotechnology, Government of India, C-127, Phase-8, Industrial Area, S.A.S. Nagar, Mohali 160071, Punjab, India article info abstract Article history: The multigene family of enzymes known as glycosyltransferases or popularly known as GTs catalyze the addition Received 6 October 2015 of carbohydrate moiety to a variety of synthetic as well as natural compounds. Glycosylation of plant secondary Received in revised form 6 February 2016 metabolites is an emerging area of research in drug designing and development. The unsurpassing complexity Accepted 19 March 2016 and diversity among natural products arising due to glycosylation type of alterations including Available online xxxx glycodiversification and glycorandomization are emerging as the promising approaches in pharmacological stud- ies. While, some GTs with broad spectrum of substrate specificity are promising candidates for glycoengineering Keywords: fi Catalytic mechanism while others with stringent speci city pose limitations in accepting molecules and performing catalysis. With the Drug designing rising trends in diseases and the efficacy/potential of natural products in their treatment, glycosylation of plant Glycoconjugates secondary metabolites constitutes a key mechanism in biogeneration of their glycoconjugates possessing medic- Glycosyltransferases inal properties. -
Universidade De São Paulo Instituto De Química De São Paulo Química Orgânica E Biológica
UNIVERSIDADE DE SÃO PAULO INSTITUTO DE QUÍMICA DE SÃO PAULO QUÍMICA ORGÂNICA E BIOLÓGICA MARCELO TAVARES DE OLIVEIRA QUANTUM CHEMICAL EXPLORATIONS INTO THE BIOSYNTHESIS OF PENTACYCLIC TRITERPENE FRIEDELIN TESE DE DOUTORADO SÃO CARLOS 2019 MARCELO TAVARES DE OLIVEIRA QUANTUM CHEMICAL EXPLORATIONS INTO THE BIOSYNTHESIS OF PENTACYCLIC TRITERPENE FRIEDELIN Tese apresentada ao Instituto de Química de São Carlos da Universidade de São Paulo como parte dos requisitos para a obtenção do título de doutor em ciências Área de concentração: Química Orgânica e Biológica Orientador: Prof. Dr. Albérico B. F. da Silva SÃO CARLOS 2019 To Sarah. Acknowledgments Firstly, I wish to express my sincere thanks to Prof. Albérico for facilitating “in his very own way” the work described here in the course of the past year and a half. I thank Prof. Ataualpa Braga (IQ/USP) for his most helpful discussions on methods, especially the tweaks of gaussian. Prof. Glaucius Oliva (IFSC/USP) is acknowledged for his precious contribution towards the zeitgeist workstation where most computations were carried out. Mr. Gilmar Bertollo Jr. (IFSC/USP), a very knowledgeable tech guy, for his great assistance with hardware – very appreciated. I express my gratitude to all colleagues (and a few new friends) as well as all members of the community at large in the chemistry institute (IQSC/USP) and the physics institute (IFSC/USP). To all those I came across over the past few years of postgraduate studies who had a share of contribution to make things easier somehow. The Coordination for the Improvement of Higher Education Personnel, CAPES (Coordenação de Aperfeiçoamento de Pessoal de Nível Superior) is acknowledged for an institutional studentship. -
A Single Oxidosqualene Cyclase Produces the Seco-Triterpenoid A
A Single Oxidosqualene Cyclase Produces the Seco-Triterpenoid a-Onocerin Aldo Almeida, Lemeng Dong, Bekzod Khakimov, Jean-Etienne Bassard, Tessa Moses, Frederic Lota, Alain Goossens, Giovanni Appendino, Soren Bak To cite this version: Aldo Almeida, Lemeng Dong, Bekzod Khakimov, Jean-Etienne Bassard, Tessa Moses, et al.. A Single Oxidosqualene Cyclase Produces the Seco-Triterpenoid a-Onocerin. Plant Physiology, American Society of Plant Biologists, 2018. hal-02885734 HAL Id: hal-02885734 https://hal.archives-ouvertes.fr/hal-02885734 Submitted on 30 Jun 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. A Single Oxidosqualene Cyclase Produces the Seco-Triterpenoid a-Onocerin1[OPEN] Aldo Almeida,a Lemeng Dong,a Bekzod Khakimov,b Jean-Etienne Bassard,a Tessa Moses,c,d Frederic Lota,e Alain Goossens,c,d Giovanni Appendino,f and Søren Baka,2 aDepartment of Plant and Environmental Science, University of Copenhagen, DK-1871 Frederiksberg C, Denmark bDepartment of Food Science, University of Copenhagen, DK-1958 Frederiksberg C, Denmark cGhent University, Department of Plant Biotechnology and Bioinformatics, 9052 Ghent, Belgium dVIB Center for Plant Systems Biology, 9052 Ghent, Belgium eAlkion Biopharma SAS, 91000 Evry, France fDipartimento di Scienze del Farmaco, Università del Piemonte Orientale, Largo Donegani 2, 28100 Novara, Italy ORCID IDs: 0000-0001-5284-8992 (A.A.); 0000-0002-1435-1907 (L.D.); 0000-0001-9366-4727 (T.M.); 0000-0002-9330-5289 (F.L.); 0000-0002-1599-551X (A.G.); 0000-0003-4100-115X (S.B.). -
Allantoin, a Stress-Related Purine Metabolite, Can Activate Jasmonate Signaling in a MYC2-Regulated and Abscisic Acid-Dependent Manner
Supplementary Data Allantoin, a stress-related purine metabolite, can activate jasmonate signaling in a MYC2-regulated and abscisic acid-dependent manner Hiroshi Takagi, Yasuhiro Ishiga, Shunsuke Watanabe, Tomokazu Konishi, Mayumi Egusa, Nobuhiro Akiyoshi, Takakazu Matsuura, Izumi C. Mori, Takashi Hirayama, Hironori Kaminaka, Hiroshi Shimada, and Atsushi Sakamoto The following Supplementary Data are available for this article: Methods S1. Quantification of JA and JA-Ile; Accession numbers. Figure S1. The purine catabolism pathway and metabolites derived therefrom. Figure S2. Hierarchical tree graph of over-represented GO terms for genes with significantly increased expression in the aln-1 mutant. Figure S3. Hierarchical tree graph of over-represented GO terms for genes with significantly reduced expression in the aln-1 mutant. Figure S4. Basal level expression of PR-1 as a canonical SA marker. Figure S5. Characterization of the aln-1 jar1-1 double mutant. Figure S6. Reduced response to MeJA of anthocyanin accumulation in the aah mutant. Figure S7. Characterization of the aln-1 bglu18 double mutant. Table S1. Primers used in this study. Table S2. LC-ESI-MS/MS parameters for jasmonate determination. Table S3. Genes with significantly increased expression in the aln-1 mutant. Table S4. Genes with significantly reduced expression in the aln-1 mutant. Supplementary Methods S1 Quantification of jasmonic acid (JA) and JA-Ile Extraction and quantification of JA and JA-Ile were performed following the method of Preston et al. (2009) with minor modifications. The stable isotope-labeled compounds used as 2 internal standards were: [ H2]JA (Tokyo Chemical industry Co., Ltd., Tokyo, Japan) and 13 13 [ C6]JA-Ile, which was synthesized with [ C6]Ile (Cambridge Isotope Laboratories, Andover, MA, USA) as described in Jikumaru et al.