Successful Mating and Hybridisation in Two Closely Related Flatworm
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Detection of Cryptic Species Xa9846584
DETECTION OF CRYPTIC SPECIES XA9846584 A.F. COCKBURN, T. JENSEN, J.A. SEAWRIGHT United States Department of Agriculture, Agricultural Research Service, Medical and Veterinary Entomology Research Laboratory, Gainesville, Florida, USA Abstract Morphologically similar cryptic species are common in insects. In Anopheles mosquitoes, most morphologically described species are complexes of cryptic species. Cryptic species are of great practical importance for two reasons: first, one or more species of the complex might not be a pest and control efforts directed at the complex as a whole would therefore be partly wasted; and second, genetic (and perhaps biological) control strategies directed against one species of the complex would not affect other species of the complex. At least one SIT effort has failed because the released sterile insects were of a different species and therefore did not mate with the wild insects being targeted. We use a multidisciplinary approach for detection of cryptic species complexes, focusing first on identifying variability in wild populations using RFLPs of mitochondrial and ribosomal RNA genes (mtDNA and rDNA); followed by confirmation using a variety of other techniques. For rapid identification of wild individuals of field collections, we use a DNA dot blot assay. DNA probes can be isolated by differential screening, however we are currently focusing on the sequencing of the rDNA extragenic spacers. These regions are repeated several hundred times per genome in mosquitoes and evolve rapidly. Molecular drive tends to keep the individual genes homogeneous within a species. 1. INTRODUCTION Surprisingly, the problem of cryptic species has not received adequate attention in pest control. Two recent examples of important pests that are cryptic species are the silverleaf whitefly (originally thought to be the sweet potato whitefly), which has caused enormous economic damage in the US in the last few years, and was not described as a separate species until last year [1]; the fall armyworm, which was recently described as two species [2]. -
A Robust Test for Assortative Mating
European Journal of Human Genetics (2000) 8, 119–124 © 2000 Macmillan Publishers Ltd All rights reserved 1018–4813/00 $15.00 y www.nature.com/ejhg ARTICLE A robust test for assortative mating Emmanuelle G´enin1, Carole Ober2, Lowell Weitkamp3 and Glenys Thomson1 1Department of Integrative Biology, University of California, Berkeley, CA, USA; 2Department of Human Genetics, University of Chicago, Chicago, IL, USA; 3Department of Psychiatry and Division of Genetics, University of Rochester Medical Center, Rochester, NY, USA Testing for random mating in human populations is difficult due to confounding factors such as ethnic preference and population stratification. With HLA, the high level of polymorphism is an additional problem since it is rare for couples to share the same haplotype. Focus on an ethnically homogeneous population, where levels of polymorphism at HLA loci are more limited, may provide the best situation in which to detect non-random mating. However, such populations are often genetic isolates where there may be inbreeding to an extent that is difficult to quantify and account for. We have developed a test for random mating at a multiallelic locus that is robust to stratification and inbreeding. This test relies on the availability of genotypic information from the parents of both spouses. The focus of the test is on families where there is allele sharing between the parents of both spouses, so that potential spouses could share an allele. Denoting the shared allele at the locus of interest by A, then under the assumption of random mating, heterozygous parents AX should transmit allele A equally as frequently as allele X to their offspring. -
The Taxonomy of Primates in the Laboratory Context
P0800261_01 7/14/05 8:00 AM Page 3 C HAPTER 1 The Taxonomy of Primates T HE T in the Laboratory Context AXONOMY OF P Colin Groves RIMATES School of Archaeology and Anthropology, Australian National University, Canberra, ACT 0200, Australia 3 What are species? D Taxonomy: EFINITION OF THE The biological Organizing nature species concept Taxonomy means classifying organisms. It is nowadays commonly used as a synonym for systematics, though Disagreement as to what precisely constitutes a species P strictly speaking systematics is a much broader sphere is to be expected, given that the concept serves so many RIMATE of interest – interrelationships, and biodiversity. At the functions (Vane-Wright, 1992). We may be interested basis of taxonomy lies that much-debated concept, the in classification as such, or in the evolutionary implica- species. tions of species; in the theory of species, or in simply M ODEL Because there is so much misunderstanding about how to recognize them; or in their reproductive, phys- what a species is, it is necessary to give some space to iological, or husbandry status. discussion of the concept. The importance of what we Most non-specialists probably have some vague mean by the word “species” goes way beyond taxonomy idea that species are defined by not interbreeding with as such: it affects such diverse fields as genetics, biogeog- each other; usually, that hybrids between different species raphy, population biology, ecology, ethology, and bio- are sterile, or that they are incapable of hybridizing at diversity; in an era in which threats to the natural all. Such an impression ultimately derives from the def- world and its biodiversity are accelerating, it affects inition by Mayr (1940), whereby species are “groups of conservation strategies (Rojas, 1992). -
Local Adaptation Fuels Cryptic Speciation in Terrestrial Annelids’
bioRxiv preprint doi: https://doi.org/10.1101/872309; this version posted December 11, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Title: ‘Local adaptation fuels cryptic speciation in terrestrial annelids’ Running title: Local adaptation in cryptic terrestrial annelids Daniel Fernández Marchán1,2*, Marta Novo1, Nuria Sánchez1, Jorge Domínguez2, Darío J. Díaz Cosín1, Rosa Fernández3* 1 Department of Biodiversity, Ecology and Evolution, Faculty of Biology, Universidad Complutense de Madrid, Madrid, Spain. 2 Current address: Departamento de Ecoloxía e Bioloxía Animal, Universidade de Vigo, Vigo, E-36310, Spain 3 Animal Biodiversity and Evolution Program, Institute of Evolutionary Biology (CSIC- UPF), Passeig Marítim de la Barceloneta, 37-49, 08003 Barcelona, Spain. * Corresponding authors: [email protected], [email protected] Abstract bioRxiv preprint doi: https://doi.org/10.1101/872309; this version posted December 11, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Uncovering the genetic and evolutionary basis of cryptic speciation is a major focus of evolutionary biology. Next Generation Sequencing (NGS) allows the identification of genome-wide local adaptation signatures, but has rarely been applied to cryptic complexes - particularly in the soil milieu - as is the case with integrative taxonomy. The earthworm genus Carpetania, comprising six previously suggested putative cryptic lineages, is a promising model to study the evolutionary phenomena shaping cryptic speciation in soil-dwelling lineages. Genotyping-By-Sequencing (GBS) was used to provide genome-wide information about genetic variability between seventeen populations, and geometric morphometrics analyses of genital chaetae were performed to investigate unexplored cryptic morphological evolution. -
Species Concepts and the Evolutionary Paradigm in Modern Nematology
JOURNAL OF NEMATOLOGY VOLUME 30 MARCH 1998 NUMBER 1 Journal of Nematology 30 (1) :1-21. 1998. © The Society of Nematologists 1998. Species Concepts and the Evolutionary Paradigm in Modern Nematology BYRON J. ADAMS 1 Abstract: Given the task of recovering and representing evolutionary history, nematode taxonomists can choose from among several species concepts. All species concepts have theoretical and (or) opera- tional inconsistencies that can result in failure to accurately recover and represent species. This failure not only obfuscates nematode taxonomy but hinders other research programs in hematology that are dependent upon a phylogenetically correct taxonomy, such as biodiversity, biogeography, cospeciation, coevolution, and adaptation. Three types of systematic errors inherent in different species concepts and their potential effects on these research programs are presented. These errors include overestimating and underestimating the number of species (type I and II error, respectively) and misrepresenting their phylogenetic relationships (type III error). For research programs in hematology that utilize recovered evolutionary history, type II and III errors are the most serious. Linnean, biological, evolutionary, and phylogenefic species concepts are evaluated based on their sensitivity to systematic error. Linnean and biologica[ species concepts are more prone to serious systematic error than evolutionary or phylogenetic concepts. As an alternative to the current paradigm, an amalgamation of evolutionary and phylogenetic species concepts is advocated, along with a set of discovery operations designed to minimize the risk of making systematic errors. Examples of these operations are applied to species and isolates of Heterorhab- ditis. Key words: adaptation, biodiversity, biogeography, coevolufion, comparative method, cospeciation, evolution, nematode, philosophy, species concepts, systematics, taxonomy. -
Sociobiology and Conflict. Evolutionary Perspectives On
S. Afr. J. Zool. 1992,27(2) 91 Book Reviews demonstration of heritability. If there is no heritable variance in a trait, selection cannot operate. Glib statements like the following: ' ... for any socially living mammalian species the competing sets of needs under discussion are very general and basic. We must there Sociobiology and Conflict. Evolutionary fore assume thal the varill1lce in the balance between tlwse sets of basic needs has strong genetic roots' (van der Molen, p. 65, my perspectives on competition, coopera emphasis) tion, violence and warfare. are inadequate. Without the demonstration of heritability, adapta tionist explanations remain 'just-so stories'. This point has been made many times in the past, but the message has still not been Edited by J. van der Dennen and V. Falger received and understood. It is 15 years since the pUblication of Published by Chapman and Hall, London Wilson's opus magnum, Sociobiology. Surely this is time enough 338 pages for workers who posit genetic explanations to begin to accumulate some genetic data? Some of us still like to believe that biology is a science - even when it is applied to the human species. A tho This book comprises 14 essays that explore the potential signifi rough scientific treatment demands critical examination of all prior cance of sociobiological theorising to an understanding of human assumptions. aggressive behaviour, 'in the hope that we might better understand Then there is the far more fundamental question as to whether and come to terms with the problems of human conflict' (p. 14). or not theories regarding the selective origin of I18gressive behavi The thesis advanced by the majority of the contributors is predica our in individuals - regardless of their merits and demerits - ted on the following notions: (i) that aggressive behaviour in can tell us anything whatsoever about the conduct of war between humans has a genetic basis which is sufficiently deterministic to nations. -
History and Scope of Microbiology the Story of Invisible Organisms
A study material for M.Sc. Biochemistry (Semester: IV) Students on the topic (EC-1; Unit I) History and Scope of Microbiology The story of invisible organisms Dr. Reena Mohanka Professor & Head Department of Biochemistry Patna University Mob. No.:- +91-9334088879 E. Mail: [email protected] MICROBIOLOGY 1. WHAT IS A MICROBIOLOGY? Micro means very small and biology is the study of living things, so microbiology is the study of very small living things normally too small that are usually unable to be viewed with the naked eye. Need a microscope to see them Virus - 10 →1000 nanometers Bacteria - 0.1 → 5 micrometers (Human eye ) can see 0.1 mm to 1 mm Microbiology has become an umbrella term that encompasses many sub disciplines or fields of study. These include: - Bacteriology: The study of bacteria - Mycology: Fungi - Protozoology: Protozoa - Phycology: Algae - Parasitology: Parasites - Virology: Viruses WHAT IS THE NEED TO STUDY MICROBIOLOGY • Genetic engineering • Recycling sewage • Bioremediation: use microbes to remove toxins (oil spills) • Use of microbes to control crop pests • Maintain balance of environment (microbial ecology) • Basis of food chain • Nitrogen fixation • Manufacture of food and drink • Photosynthesis: Microbes are involved in photosynthesis and accounts for >50% of earth’s oxygen History of Microbiology Anton van Leeuwenhoek (1632-1723) (Dutch Scientist) • The credit of discovery of microbial world goes to Anton van Leeuwenhoek. He made careful observations of microscopic organisms, which he called animalcules (1670s). • Antoni van Leeuwenhoek described live microorganisms that he observed in teeth scrapings and rain water. • Major contributions to the development of microbiology was the invention of the microscope (50-300X magnification) by Anton von Leuwenhoek and the implementation of the scientific method. -
Chapter 1 Microbiology—The Science
Chapter 1 Microbiology—The Science Terms Introduced in This Chapter After reading Chapter 1, you should be familiar with the following terms. These terms are defined in Chapter 1 and in the Glossary. Abiogenesis Mycology Antibiotic Nonpathogens Bacteriologist Obligate intracellular pathogens Bacteriology Opportunistic pathogens Biogenesis Paleomicrobiology Biology Parasites Bioremediation Parasitologist Biotechnology Parasitology Decomposers Pasteurization Etiologic agent Pathogens Etiology Petri dish Fastidious microorganisms Phycologist Genetic engineering Phycology In vitro Phytoplankton In vivo Plankton Indigenous microflora Protozoologist Infectious diseases Protozoology Koch's Postulates Pure culture Microbial ecology Saprophyte Microbial intoxications Toxin Microbiologist Ubiquitous Microbiology Virologist Microorganisms Virology Microscope Zoonoses (sing., zoonosis) Mycologist Zooplankton Insight Additional Careers in Microbiology Agricultural Microbiology Agricultural microbiology is an excellent career field for individuals with interests in agriculture and microbiology. Included in the field of agricultural microbiology are studies of the beneficial and harmful roles of microbes in soil formation and fertility; in carbon, nitrogen, phosphorus, and sulfur cycles; in diseases of plants; in the digestive processes of cows and other ruminants; and in the production of crops and foods. Many different viruses, bacteria, and fungi cause plant diseases. A food microbiologist is concerned with the production, processing, storage, cooking, -
Parasitology
Parasitology 020314TR Online Ordering Available Parasitology Table of Contents A Culture of Service™ 1 Books Headquarters 2 Parasitology Transports 1430 West McCoy Lane Santa Maria, CA 93455 800.266.2222 : phone 6 Total Fix Procedure 805.346.2760 : fax [email protected] 7 Fecal Concentrating Systems www.HardyDiagnostics.com 8 Centrifuge Tubes Distribution Centers Santa Maria, California 9 Stains and Reagents Olympia, Washington Salt Lake City, Utah Phoenix, Arizona 11 Staining Accessories Dallas, Texas Springboro, Ohio 12 Control Slides for Stains Lake City, Florida Albany, New York 13 Parasite Suspensions Raleigh, North Carolina 14 Culture Media 15 11 Ways to Make a Better Slide 17 Microscope Supplies 19 Rapid Tests The Quality Management System at the Hardy Diagnostics manufacturing facility is certified to ISO 13485. Copyright © 2014 Hardy Diagnostics Books Cases in Human Parasitology This book contains 62 case studies that focus solely on parasites which adversely affect humans. Challenging cases with details regarding non-parasitic infections whose symptoms closely resemble those of parasitic infections are included. By Judith S. Heelan, 256 pages, softcover, ASM Press, 2004, Each................................................................................5812961 Diagnostic Medical Parasitology This book contains updates and advances in the field of diagnostic medical parasitology and reports on the dramatic changes that have occurred in this field. Newly recognized parasites, alternative diagnostic techniques defined -
The Evolution of Ancestral and Species-Specific Adaptations in Snowfinches at the Qinghai–Tibet Plateau
The evolution of ancestral and species-specific adaptations in snowfinches at the Qinghai–Tibet Plateau Yanhua Qua,1,2, Chunhai Chenb,1, Xiumin Chena,1, Yan Haoa,c,1, Huishang Shea,c, Mengxia Wanga,c, Per G. P. Ericsond, Haiyan Lina, Tianlong Caia, Gang Songa, Chenxi Jiaa, Chunyan Chena, Hailin Zhangb, Jiang Lib, Liping Liangb, Tianyu Wub, Jinyang Zhaob, Qiang Gaob, Guojie Zhange,f,g,h, Weiwei Zhaia,g, Chi Zhangb,2, Yong E. Zhanga,c,g,i,2, and Fumin Leia,c,g,2 aKey Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, 100101 Beijing, China; bBGI Genomics, BGI-Shenzhen, 518084 Shenzhen, China; cCollege of Life Science, University of Chinese Academy of Sciences, 100049 Beijing, China; dDepartment of Bioinformatics and Genetics, Swedish Museum of Natural History, SE-104 05 Stockholm, Sweden; eBGI-Shenzhen, 518083 Shenzhen, China; fState Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, 650223 Kunming, China; gCenter for Excellence in Animal Evolution and Genetics, Chinese Academy of Sciences, 650223 Kunming, China; hSection for Ecology and Evolution, Department of Biology, University of Copenhagen, DK-2100 Copenhagen, Denmark; and iChinese Institute for Brain Research, 102206 Beijing, China Edited by Nils Chr. Stenseth, University of Oslo, Oslo, Norway, and approved February 24, 2021 (received for review June 16, 2020) Species in a shared environment tend to evolve similar adapta- one of the few avian clades that have experienced an “in situ” tions under the influence of their phylogenetic context. Using radiation in extreme high-elevation environments, i.e., higher snowfinches, a monophyletic group of passerine birds (Passer- than 3,500 m above sea level (m a.s.l.) (17, 18). -
Parasitology Meets Ecology on Its Own Terms: Margolis Et Al
Parasitology Meets Ecology on Its Own Terms: Margolis et al. Revisited Author(s): Albert O. Bush, Kevin D. Lafferty, Jeffrey M. Lotz and Allen W. Shostak Source: The Journal of Parasitology, Vol. 83, No. 4 (Aug., 1997), pp. 575-583 Published by: The American Society of Parasitologists Stable URL: http://www.jstor.org/stable/3284227 Accessed: 10-06-2015 22:17 UTC Your use of the JSTOR archive indicates your acceptance of the Terms & Conditions of Use, available at http://www.jstor.org/page/ info/about/policies/terms.jsp JSTOR is a not-for-profit service that helps scholars, researchers, and students discover, use, and build upon a wide range of content in a trusted digital archive. We use information technology and tools to increase productivity and facilitate new forms of scholarship. For more information about JSTOR, please contact [email protected]. The American Society of Parasitologists is collaborating with JSTOR to digitize, preserve and extend access to The Journal of Parasitology. http://www.jstor.org This content downloaded from 128.111.90.61 on Wed, 10 Jun 2015 22:17:26 UTC All use subject to JSTOR Terms and Conditions J. Parasitol., 83(4), 1997 p. 575-583 ? American Society of Parasitologists 1997 PARASITOLOGYMEETS ECOLOGYON ITS OWN TERMS: MARGOLISET AL. REVISITED* Albert O. Busht, Kevin D. Laffertyt, Jeffrey M. Lotz?, and Allen W. Shostakll Departmentof Zoology, BrandonUniversity, Brandon, Manitoba, Canada R7A 6A9 ABSTRACT:We consider 27 populationand communityterms used frequentlyby parasitologistswhen describingthe ecology of parasites.We provide suggestions for various terms in an attemptto foster consistent use and to make terms used in parasite ecology easier to interpretfor those who study free-living organisms.We suggest strongly that authors,whether they agree or disagree with us, provide complete and unambiguousdefinitions for all parametersof their studies. -
Speciation in Geographical Setting
Speciation Speciation 2019 2019 The degree of reproductive isolation Substantial variation exists in among geographical sets of species - anagenesis populations within an actively 1859 1859 evolving species complex is often Achillea - yarrow tested by crossing experiments — as in the tidy tips of California 100K bp 100K bp back in time back in time back Rubus parviforus K = 4 mean population assignment 2 mya 2 mya ID CO WI_Door 5 mya BC_Hixton BC_MtRob WI_BruleS 5 mya BC_McLeod CA_Klamath MI_Windigo WA_Cascade WA_BridgeCr SD_BlackHills OR_Willamette MI_Drummond Speciation Speciation 2019 Reproductive isolation will ultimately stop all Although simple in concept, the recognition of species and thus the definition genetic connections among sets of populations of what are species have been controversial — more than likely due to the – cladogenesis or speciation continuum nature of the pattern resulting from the process of speciation 1859 Example: mechanical isolation via floral shape changes and pollinators between two parapatric species of California Salvia (sage) 100K bp back in time back 2 mya S. mellifera 5 mya Salvia apiana 1 Speciation Speciation Although simple in concept, the recognition of species and thus the definition Animal examples of speciation often show of what are species have been controversial — more than likely due to the clear reproductive barriers - hence zoologists continuum nature of the pattern resulting from the process of speciation preference (as opposed to botanists) for the Reproductive isolating Biological