Animal-Associated Fungi: Editorial
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
ARTICLE New Records of Hysterangium (Basidiomycota) from a Eucalyptus Plantation in Southern Brazil
e B d io o c t i ê u t n i c t i s Revista Brasileira de Biociências a n s I Brazilian Journal of Biosciences U FRGS ISSN 1980-4849 (on-line) / 1679-2343 (print) ARTICLE New records of Hysterangium (Basidiomycota) from a Eucalyptus plantation in southern Brazil Vagner Gularte Cortez1*, Marcelo Aloisio Sulzbacher2, Iuri Goulart Baseia3, Zaida Inês Antoniolli2 and Rosa Mara Borges da Silveira4 Received: July 12 2010 Received after revision: February 22 2011 Accepted: March 15 2011 Available online at http://www.ufrgs.br/seerbio/ojs/index.php/rbb/article/view/1661 ABSTRACT: (New records of Hysterangium (Basidiomycota) from a Eucalyptus plantation in southern Brazil). Hysteran- gium affineand H. inflatumare recorded for the first time from Brazil, based on specimens collected in a plantation of exotic Eucalyptus. Detailed descriptions and illustrations of the studied collections are presented, including an identification key to the species known from southern Brazil. Key words: ectomycorrhizae, false-truffles,Hysterangiales , taxonomy. RESUMO: (Novos registros de Hysterangium (Basidiomycota) em plantação de Eucalyptus no sul do Brasil). Hysterangium affinee H. inflatum têm sua ocorrência registrada pela primeira vez no Brasil a partir de espécimes coletados em plantação de Eucalyptus. São apresentadas descrições e ilustrações dos espécimes estudados, assim como uma chave de identificação das espécies de Hysterangium conhecidas no sul do Brasil. Palavras-chave: ectomicorrizas, falsas-trufas, Hysterangiales, taxonomia. INTRODUCTION The present paper comprises some of the results of a survey of the gasteroid fungi from the state of Rio Grande Hysterangium Vittad. is a genus of sequestrate (false- do Sul (Cortez et al. -
A Higher-Level Phylogenetic Classification of the Fungi
mycological research 111 (2007) 509–547 available at www.sciencedirect.com journal homepage: www.elsevier.com/locate/mycres A higher-level phylogenetic classification of the Fungi David S. HIBBETTa,*, Manfred BINDERa, Joseph F. BISCHOFFb, Meredith BLACKWELLc, Paul F. CANNONd, Ove E. ERIKSSONe, Sabine HUHNDORFf, Timothy JAMESg, Paul M. KIRKd, Robert LU¨ CKINGf, H. THORSTEN LUMBSCHf, Franc¸ois LUTZONIg, P. Brandon MATHENYa, David J. MCLAUGHLINh, Martha J. POWELLi, Scott REDHEAD j, Conrad L. SCHOCHk, Joseph W. SPATAFORAk, Joost A. STALPERSl, Rytas VILGALYSg, M. Catherine AIMEm, Andre´ APTROOTn, Robert BAUERo, Dominik BEGEROWp, Gerald L. BENNYq, Lisa A. CASTLEBURYm, Pedro W. CROUSl, Yu-Cheng DAIr, Walter GAMSl, David M. GEISERs, Gareth W. GRIFFITHt,Ce´cile GUEIDANg, David L. HAWKSWORTHu, Geir HESTMARKv, Kentaro HOSAKAw, Richard A. HUMBERx, Kevin D. HYDEy, Joseph E. IRONSIDEt, Urmas KO˜ LJALGz, Cletus P. KURTZMANaa, Karl-Henrik LARSSONab, Robert LICHTWARDTac, Joyce LONGCOREad, Jolanta MIA˛ DLIKOWSKAg, Andrew MILLERae, Jean-Marc MONCALVOaf, Sharon MOZLEY-STANDRIDGEag, Franz OBERWINKLERo, Erast PARMASTOah, Vale´rie REEBg, Jack D. ROGERSai, Claude ROUXaj, Leif RYVARDENak, Jose´ Paulo SAMPAIOal, Arthur SCHU¨ ßLERam, Junta SUGIYAMAan, R. Greg THORNao, Leif TIBELLap, Wendy A. UNTEREINERaq, Christopher WALKERar, Zheng WANGa, Alex WEIRas, Michael WEISSo, Merlin M. WHITEat, Katarina WINKAe, Yi-Jian YAOau, Ning ZHANGav aBiology Department, Clark University, Worcester, MA 01610, USA bNational Library of Medicine, National Center for Biotechnology Information, -
Systematics of the Genus Ramaria Inferred from Nuclear Large Subunit And
AN ABSTRACT OF THE THESIS OF Andrea J. Humpert for the degree of Master of Science in Botany and Plant Pathology presented on November 11, 1999. Title: Systematics of the Genus Ramaria Inferred from Nuclear Large Subunit and Mitochondrial Small Subunit Ribosomal DNA Sequences. Abstract approved: Redacted for Privacy Joseph W. Spatafora Ramaria is a genus of epigeous fungi common to the coniferous forests of the Pacific Northwest of North America. The extensively branched basidiocarps and the positive chemical reaction of the context in ferric sulfate are distinguishing characteristics of the genus. The genus is estimated to contain between 200-300 species and is divided into four subgenera, i.) R. subgenus Ramaria, ii.) R. subgenus Laeticolora, iii.) R. subgenus Lentoramaria and iv.) R. subgenus Echinoramaria, according to macroscopic, microscopic and macrochemical characters. The systematics of Ramaria is problematic and confounded by intraspecific and possibly ontogenetic variation in several morphological traits. To test generic and intrageneric taxonomic classifications, two gene regions were sequenced and subjected to maximum parsimony analyses. The nuclear large subunit ribosomal DNA (nuc LSU rDNA) was used to test and refine generic, subgeneric and selected species concepts of Ramaria and the mitochondrial small subunit ribosomal DNA (mt SSU rDNA) was used as an independent locus to test the monophyly of Ramaria. Cladistic analyses of both loci indicated that Ramaria is paraphyletic due to several non-ramarioid taxa nested within the genus including Clavariadelphus, Gautieria, Gomphus and Kavinia. In the nuc LSU rDNA analyses, R. subgenus Ramaria species formed a monophyletic Glade and were indicated for the first time to be a sister group to Gautieria. -
Phylogenetic Relationships of the Gomphales Based on Nuc-25S-Rdna, Mit-12S-Rdna, and Mit-Atp6-DNA Combined Sequences
fungal biology 114 (2010) 224–234 journal homepage: www.elsevier.com/locate/funbio Phylogenetic relationships of the Gomphales based on nuc-25S-rDNA, mit-12S-rDNA, and mit-atp6-DNA combined sequences Admir J. GIACHINIa,*, Kentaro HOSAKAb, Eduardo NOUHRAc, Joseph SPATAFORAd, James M. TRAPPEa aDepartment of Forest Ecosystems and Society, Oregon State University, Corvallis, OR 97331-5752, USA bDepartment of Botany, National Museum of Nature and Science (TNS), Tsukuba-shi, Ibaraki 305-0005, Japan cIMBIV/Universidad Nacional de Cordoba, Av. Velez Sarfield 299, cc 495, 5000 Co´rdoba, Argentina dDepartment of Botany and Plant Pathology, Oregon State University, Corvallis, OR 97331, USA article info abstract Article history: Phylogenetic relationships among Geastrales, Gomphales, Hysterangiales, and Phallales Received 16 September 2009 were estimated via combined sequences: nuclear large subunit ribosomal DNA (nuc-25S- Accepted 11 January 2010 rDNA), mitochondrial small subunit ribosomal DNA (mit-12S-rDNA), and mitochondrial Available online 28 January 2010 atp6 DNA (mit-atp6-DNA). Eighty-one taxa comprising 19 genera and 58 species were inves- Corresponding Editor: G.M. Gadd tigated, including members of the Clathraceae, Gautieriaceae, Geastraceae, Gomphaceae, Hysterangiaceae, Phallaceae, Protophallaceae, and Sphaerobolaceae. Although some nodes Keywords: deep in the tree could not be fully resolved, some well-supported lineages were recovered, atp6 and the interrelationships among Gloeocantharellus, Gomphus, Phaeoclavulina, and Turbinel- Gomphales lus, and the placement of Ramaria are better understood. Both Gomphus sensu lato and Rama- Homobasidiomycetes ria sensu lato comprise paraphyletic lineages within the Gomphaceae. Relationships of the rDNA subgenera of Ramaria sensu lato to each other and to other members of the Gomphales were Systematics clarified. -
Sequestrate Fungi from Patagonian Nothofagus Forests: Cystangium (Russulaceae, Basidiomycota)
Sequestrate fungi from Patagonian Nothofagus forests: Cystangium (Russulaceae, Basidiomycota) Trierveiler-Pereira, L., Smith, M. E., Trappe, J. M., & Nouhra, E. R. (2015). Sequestrate fungi from Patagonian Nothofagus forests: Cystangium (Russulaceae, Basidiomycota). Mycologia, 107(1), 90-103. doi:10.3852/13-302 10.3852/13-302 Allen Press Inc. Version of Record http://cdss.library.oregonstate.edu/sa-termsofuse Mycologia, 107(1), 2015, pp. 90–103. DOI: 10.3852/13-302 # 2015 by The Mycological Society of America, Lawrence, KS 66044-8897 Sequestrate fungi from Patagonian Nothofagus forests: Cystangium (Russulaceae, Basidiomycota) Larissa Trierveiler-Pereira1 Ectomycorrhizal, hypogeous fungi in the Basidio- PPGBOT, Department of Botany, Universidade Federal mycota and Ascomycota are important components of do Rio Grande do Sul, Porto Alegre, Brazil 91501-970 the forest soil environment. Not only do they function Matthew E. Smith as nutrient absorbing organisms for their tree hosts, Department of Plant Pathology, University of Florida, these fungi also improve soil conditions (Perry et al. Gainesville, Florida 32611 1989) and interact with a variety of forest organisms (Trappe and Luoma 1992). In particular, they are an James M. Trappe important food source for animals in ectomycorrhizal Department of Forest Ecosystems and Society, Oregon forests (Maser et al. 1978, Claridge et al. 2002, Vernes State University, Corvallis, Oregon 97331 et al. 2004, Claridge and Trappe 2005, Trappe et al. Eduardo R. Nouhra 2006, Vernes 2010, Katarzˇyte˙ and Kutorga 2011, Instituto Multidisciplinario de Biologı´a Vegetal Schickmann et al. 2012), including those of Argentina (CONICET), Universidad Nacional de Co´rdoba, (Perez Calvo et al. 1989, Nouhra et al. 2005). -
Ectomycorrhizal Fungi from Southern Brazil – a Literature-Based Review, Their Origin and Potential Hosts
Mycosphere Doi 10.5943/mycosphere/4/1/5 Ectomycorrhizal fungi from southern Brazil – a literature-based review, their origin and potential hosts Sulzbacher MA1*, Grebenc, T2, Jacques RJS3 and Antoniolli ZI3 1Universidade Federal de Pernambuco, Departamento de Micologia/CCB, Av. Prof. Nelson Chaves, s/n, CEP: 50670- 901, Recife, PE, Brazil 2Slovenian Forestry Institute Vecna pot 2, SI-1000 Ljubljana, Slovenia 3Universidade Federal de Santa Maria, Departamento de Solos, CCR Campus Universitário, 971050-900, Santa Maria, RS, Brazil Sulzbacher MA, Grebenc T, Jacques RJS, Antoniolli ZI 2013 – Ectomycorrhizal fungi from southern Brazil – a literature-based review, their origin and potential hosts. Mycosphere 4(1), 61– 95, Doi 10.5943 /mycosphere/4/1/5 A first list of ectomycorrhizal and putative ectomycorrhizal fungi from southern Brazil (the states of Rio Grande do Sul, Santa Catarina and Paraná), their potential hosts and origin is presented. The list is based on literature and authors observations. Ectomycorrhizal status and putative origin of listed species was assessed based on worldwide published data and, for some genera, deduced from taxonomic position of otherwise locally distributed species. A total of 144 species (including 18 doubtfull species) in 49 genera were recorded for this region, all accompanied with a brief distribution, habitat and substrate data. At least 30 collections were published only to the genus level and require further taxonomic review. Key words – distribution – habitat – mycorrhiza – neotropics – regional list Article Information Received 28 November 2012 Accepted 20 December 2012 Published online 10 February 2013 *Corresponding author: MA Sulzbacher – e-mail – [email protected] Introduction work of Singer & Araújo (1979), Singer et al. -
Redacted for Privacy
AN ABSTRACT OF THE DISSERTATIONOF Kentaro Hosaka for the degree of Doctor ofPhilosophy in Botany and Plant Pathology presented on October 26, 2005. Title: Systematics, Phylogeny, andBiogeography of the Hysterangiales and Related Taxa (Phallomycetidae, Homobasidiomycetes). Abstract approved: Redacted for Privacy Monophyly of the gomphoid-phalloid dadewas confirmed based on multigene phylogenetic analyses. Four major subclades(Hysterangiales, Geastrales, Gomphales and Phallales) were also demonstratedto be monophyletic. The interrelationships among the subclades were, however, not resolved, andalternative topologies could not be rejected statistically. Nonetheless,most analyses showed that the Hysterangiales and Phallales do not forma monophyletic group, which is in contrast to traditional taxonomy. The higher-level phylogeny of thegomphoid-phalloid fungi tends to suggest that the Gomphales form a sister group with either the Hysterangialesor Phallales. Unweighted parsimonycharacter state reconstruction favorsthe independent gain of the ballistosporic mechanism in the Gomphales, but the alternativescenario of multiple losses of ballistospoiy could not be rejected statistically underlikelihood- based reconstructions. This latterhypothesis is consistent with thewidely accepted hypothesis that the loss of ballistosporyis irreversible. The transformationof fruiting body forms from nongastroid to gastroidwas apparent in the lineage leading to Gautieria (Gomphales), but thetree topology and character statereconstructions supported that truffle-like -
Phylogenetic Relationships of the Gomphales Based on Nuc-25S-Rdna, Mit-12S-Rdna, and Mit-Atp6-DNA Combined Sequences
Phylogenetic relationships of the Gomphales based on nuc-25S-rDNA, mit-12S-rDNA, and mit-atp6-DNA combined sequences a b Admir J. GIACHINl ,*, Kentaro HOSAKA , Eduardo NOUHRAc, d A Joseph SPATAFORA , James M. TRAPPE ARTICLE INFO ABSTRACT Phylogenetic relationships among Geastrales, Gomphales, Hysterangiales, and Phallales were estimated via combined sequences: nuclear large subunit ribosomal DNA (nuc-25S- rDNA), mitochondrial small subunit ribosomal DNA (mit-12S-rDNA), and mitochondrial atp6 DNA (mit-atp6-DNA). Eighty-one taxa comprising 19 genera and 58 species were inves- tigated, including members of the Clathraceae, Gautieriaceae, Geastraceae, Gomphaceae, Hysterangiaceae, Phallaceae, Protophallaceae, and Sphaerobolaceae. Although some nodes Keywords: deep in the tree could not be fully resolved, some well-supported lineages were recovered, atp6 and the interrelationships among Gloeocantharellus, Gomphus, Phaeoclavulina, and Turbinel- Gomphales Ius, and the placement of Ramaria are better understood. Both Gomphus sensu lato and Rama- Homobasidiomycetes ria sensu lato comprise paraphyletic lineages within the Gomphaceae. Relationships of the rDNA subgenera of Ramaria sensu lato to each other and to other members of the Gomphales were Systematics clarified. Within Gomphus sensu lato, Gomphus sensu stricto, Turbinellus, Gloeocantharellus and Phaeoclavulina are separated by the presence/absence of clamp connections, spore orna- mentation (echinulate, verrucose, subreticulate or reticulate), and basidiomal morphology (fan-shaped, funnel-shaped or ramarioid). Gautieria, a sequestrate genus in theGautieria- ceae, was recovered as monophyletic and nested with members of Ramaria subgenus Ramaria. This agrees with previous observations of traits shared by these two ectomycor- rhizal taxa, such as the presence of fungal mats in the soil. Clavariadelphus was recovered as a sister group to Beenakia, Kavinia, and Lentaria. -
Phallales (Agaricomycetes, Fungi) from Southern Brazil Article
Studies in Fungi 4(1): 162–184 (2019) www.studiesinfungi.org ISSN 2465-4973 Article Doi 10.5943/sif/4/1/19 Phallales (Agaricomycetes, Fungi) from Southern Brazil Trierveiler-Pereira L1*, Meijer AAR2 and Silveira RMB1 1 Programa de Pós-Graduação em Botânica, Departamento de Botânica, IB, Universidade Federal do Rio Grande do Sul (UFRGS), Porto Alegre – RS, Brazil. 2 Rodovia PR-405, km 36, Guaraqueçaba, Paraná, Brazil. Trierveiler-Pereira L, Meijer AAR, Silveira RMB 2019 – Phallales (Agaricomycetes, Fungi) from Southern Brazil. Studies in Fungi 4(1), 162–184, Doi 10.5943/sif/4/1/19 Abstract An illustrated and annotated checklist with key to 24 species of phalloids known to occur in Southern Brazil (States of Paraná, Santa Catarina and Rio Grande do Sul) are presented. The species belong to the orders Clathraceae, Claustulaceae, Lysuraceae, Phallaceae and Protophallaceae. Doubtful species are also discussed. Abrachium floriforme and Staheliomyces cinctus are the first reports from Southern Brazil and Laternea pusilla is new to the State of Santa Catarina. Key words – Brazilian mycota – fungal taxonomy – phalloid fungi – Phallomycetidae – stinkhorns Introduction Members of Phallales (Phallomycetidae, Agaricomycetes) show great variability in size, shape and color. Some species, due to bizarre shape allied to bright colors, call the attention not only of mycologists, but also of people in general. Traditionally the order included species with expanded receptacle, commonly known as stinkhorns (e.g. species of Phallus Junius ex L. and Mutinus Fr.) or lattice stinkhorns (Clathrus P. Micheli ex L. spp.), but since the sequestrate genus Claustula K.M. Curtis (Cunningham 1931) was added to the order, many other truffle-like genera have been included, such as Protubera Möller, Gelopellis Zeller, Kjeldsenia W. -
Diversity, Ecology, and Conservation of Truffle Fungi in Forests of the Pacific Northwest
United States Department of Agriculture Diversity, Ecology, and Forest Service Conservation of Truffle Pacific Northwest Research Station Fungi in Forests of the General Technical Report PNW-GTR-772 April 2009 Pacific Northwest James M. Trappe, Randy Molina, Daniel L. Luoma, D E E P R A U R T LT MENT OF AGRICU Efren Cázares, David Pilz, Jane E. Smith, Michael A. Castellano, Steven L. Miller, and Matthew J. Trappe Authors James M. Trappe is a professor, Department of Forest Science, Oregon State University, 321 Richardson Hall, Corvallis, OR 97331; he prepared sections on history of truffle science in the Pacific Northwest (PNW), evolution, and diversity of truffles. Randy Molina is a research botanist (retired), U.S. Department of Agriculture, Forest Service, Pacific Northwest Research Station, Forestry Sciences Laboratory, 629 SW Main, Suite 400, Portland, OR 97205; he prepared sections on introductory concepts, mycorrhizal symbiosis and specificity, fungal rarity, management principles, and historical contributions of James Trappe to truffle science in the PNW. Daniel L. Luoma is an assistant professor, Department of Forest Science, Oregon State University, 321 Richardson Hall, Corvallis, OR 97331; he prepared sections on community ecology, mycophagy, silvicultural effects, and inventory methods. Efren Cázares is an affiliate faculty member, Department of Forest Science, Oregon State University, 321 Richardson Hall, Corvallis, OR 97331; he prepared sections on genera descriptions. David Pilz is an affiliate faculty member, Department of Forest Science, Oregon State University, 321 Richardson Hall, Corvallis, OR 97331; he prepared sections on culinary truffles. Jane E. Smith is a research botanist and Michael Castellano is a research forester, U.S. -
14 Agaricomycetes
14 Agaricomycetes 1 2 3 4 5 1 6 D.S. HIBBETT ,R.BAUER ,M.BINDER , A.J. GIACHINI ,K.HOSAKA ,A.JUSTO ,E.LARSSON , 7 8 1,9 1 6 10 11 K.H. LARSSON , J.D. LAWREY ,O.MIETTINEN , L.G. NAGY , R.H. NILSSON ,M.WEISS , R.G. THORN CONTENTS F. Hymenochaetales . ...................... 396 G. Polyporales . ...................... 397 I. Introduction ................................. 373 H. Thelephorales. ...................... 399 A. Higher-Level Relationships . ............ 374 I. Corticiales . ................................ 400 B. Taxonomic Characters and Ecological J. Jaapiales. ................................ 402 Diversity. ...................... 376 K. Gloeophyllales . ...................... 402 1. Septal Pore Ultrastructure . ........ 376 L. Russulales . ................................ 403 2. Fruiting Bodies. .................. 380 M. Agaricomycetidae . ...................... 405 3. Ecological Roles . .................. 383 1. Atheliales and Lepidostromatales . 406 C. Fossils and Molecular Clock Dating . 386 2. Amylocorticiales . .................. 406 II. Phylogenetic Diversity ...................... 387 3. Boletales . ............................ 407 A. Cantharellales. ...................... 387 4. Agaricales . ............................ 409 B. Sebacinales . ...................... 389 III. Conclusions.................................. 411 C. Auriculariales . ...................... 390 References. ............................ 412 D. Phallomycetidae . ...................... 391 1. Geastrales. ............................ 391 2. Phallales . -
Hysterangiales Revisited: Expanded Phylogeny Reveals New Genera and Two New Suborders
VOLUME 8 DECEMBER 2021 Fungal Systematics and Evolution PAGES 65–80 doi.org/10.3114/fuse.2021.08.06 Hysterangiales revisited: expanded phylogeny reveals new genera and two new suborders N. Davoodian1*, T. Lebel1,2, M.A. Castellano3, K. Hosaka4 1Royal Botanic Gardens Victoria, South Yarra, VIC 3141, Australia 2Botanic Gardens and State Herbarium of South Australia, Adelaide, SA 5001, Australia; Royal Botanic Gardens Victoria, South Yarra, VIC 3141, Australia 3US Department of Agriculture Forest Service, Northern Research Station, Corvallis, OR 97331, USA 4National Museum of Nature and Science, Tsukuba, Ibaraki 305-0005, Japan (ORCID: 0000-0002-4469-8303) *Corresponding author: [email protected] Key words: Abstract: Hysterangiales (Phallomycetidae, Agaricomycetes, Basidiomycota) is a diverse, nearly cosmopolitan order atp6 of predominantly hypogeous, sequestrate, ectomycorrhizal fungi. Expanding on previously published phylogenies, we Phallogaster significantly increased sampling of Hysterangiales specimens, emphasizing representatives from Australia. Using protein- phylogenetics coding genes atp6 (adenosine triphosphate synthase subunit 6) and tef1 (translation elongation factor 1-α), we recovered tef1 26 provisional novel genera, and corroborated existing genera and families. Further, two new suborders (Phallogastrineae Trappea subord. nov. and Hysterangineae subord. nov.) and a new family (Phallogastraceae fam. nov.) are described, and three new combinations made to Phallogaster. Aspects of classification and biogeography are presented. Citation: Davoodian N, Lebel T, Castellano MA, Hosaka K (2021). Hysterangiales revisited: expanded phylogeny reveals new genera and two new suborders. Fungal Systematics and Evolution 8: 65–80. doi: 10.3114/fuse.2021.08.06 Received: 22 January 2021; Accepted: 9July 2021; Effectively published online: 29 July 2021 Corresponding editor: P.W.