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Gene Duplication and the Evolution of Hemoglobin Isoform Differentiation in Birds
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by DigitalCommons@University of Nebraska University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Jay F. Storz Publications Papers in the Biological Sciences 11-2012 Gene Duplication and the Evolution of Hemoglobin Isoform Differentiation in Birds Michael T. Grispo University of Nebraska-Lincoln, [email protected] Chandrasekhar Natarajan University of Nebraska-Lincoln, [email protected] Joana Projecto-Garcia University of Nebraska–Lincoln Hideaki Moriyama University of Nebraska-Lincoln, [email protected] Roy E. Weber Aarhus University, Denmark See next page for additional authors Follow this and additional works at: https://digitalcommons.unl.edu/bioscistorz Grispo, Michael T.; Natarajan, Chandrasekhar; Projecto-Garcia, Joana; Moriyama, Hideaki; Weber, Roy E.; and Storz, Jay F., "Gene Duplication and the Evolution of Hemoglobin Isoform Differentiation in Birds" (2012). Jay F. Storz Publications. 61. https://digitalcommons.unl.edu/bioscistorz/61 This Article is brought to you for free and open access by the Papers in the Biological Sciences at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Jay F. Storz Publications by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. Authors Michael T. Grispo, Chandrasekhar Natarajan, Joana Projecto-Garcia, Hideaki Moriyama, Roy E. Weber, and Jay F. Storz This article is available at DigitalCommons@University of Nebraska - Lincoln: https://digitalcommons.unl.edu/ bioscistorz/61 Published in Journal of Biological Chemistry 287:45 (November 2, 2012), pp. 37647-37658; doi: 10.1074/jbc.M112.375600 Copyright © 2012 The American Society for Biochemistry and Molecular Biology, Inc. -
1 AOS Classification Committee – North and Middle America Proposal Set 2020-A 4 September 2019 No. Page Title 01 02 Change Th
AOS Classification Committee – North and Middle America Proposal Set 2020-A 4 September 2019 No. Page Title 01 02 Change the English name of Olive Warbler Peucedramus taeniatus to Ocotero 02 05 Change the generic classification of the Trochilini (part 1) 03 11 Change the generic classification of the Trochilini (part 2) 04 18 Split Garnet-throated Hummingbird Lamprolaima rhami 05 22 Recognize Amazilia alfaroana as a species not of hybrid origin, thus moving it from Appendix 2 to the main list 06 26 Change the linear sequence of species in the genus Dendrortyx 07 28 Make two changes concerning Starnoenas cyanocephala: (a) assign it to the new monotypic subfamily Starnoenadinae, and (b) change the English name to Blue- headed Partridge-Dove 08 32 Recognize Mexican Duck Anas diazi as a species 09 36 Split Royal Tern Thalasseus maximus into two species 10 39 Recognize Great White Heron Ardea occidentalis as a species 11 41 Change the English name of Checker-throated Antwren Epinecrophylla fulviventris to Checker-throated Stipplethroat 12 42 Modify the linear sequence of species in the Phalacrocoracidae 13 49 Modify various linear sequences to reflect new phylogenetic data 1 2020-A-1 N&MA Classification Committee p. 532 Change the English name of Olive Warbler Peucedramus taeniatus to Ocotero Background: “Warbler” is perhaps the most widely used catch-all designation for passerines. Its use as a meaningful taxonomic indicator has been defunct for well over a century, as the “warblers” encompass hundreds of thin-billed, insectivorous passerines across more than a dozen families worldwide. This is not itself an issue, as many other passerine names (flycatcher, tanager, sparrow, etc.) share this common name “polyphyly”, and conventions or modifiers are widely used to designate and separate families that include multiple groups. -
The Best of Costa Rica March 19–31, 2019
THE BEST OF COSTA RICA MARCH 19–31, 2019 Buffy-crowned Wood-Partridge © David Ascanio LEADERS: DAVID ASCANIO & MAURICIO CHINCHILLA LIST COMPILED BY: DAVID ASCANIO VICTOR EMANUEL NATURE TOURS, INC. 2525 WALLINGWOOD DRIVE, SUITE 1003 AUSTIN, TEXAS 78746 WWW.VENTBIRD.COM THE BEST OF COSTA RICA March 19–31, 2019 By David Ascanio Photo album: https://www.flickr.com/photos/davidascanio/albums/72157706650233041 It’s about 02:00 AM in San José, and we are listening to the widespread and ubiquitous Clay-colored Robin singing outside our hotel windows. Yet, it was still too early to experience the real explosion of bird song, which usually happens after dawn. Then, after 05:30 AM, the chorus started when a vocal Great Kiskadee broke the morning silence, followed by the scratchy notes of two Hoffmann´s Woodpeckers, a nesting pair of Inca Doves, the ascending and monotonous song of the Yellow-bellied Elaenia, and the cacophony of an (apparently!) engaged pair of Rufous-naped Wrens. This was indeed a warm welcome to magical Costa Rica! To complement the first morning of birding, two boreal migrants, Baltimore Orioles and a Tennessee Warbler, joined the bird feast just outside the hotel area. Broad-billed Motmot . Photo: D. Ascanio © Victor Emanuel Nature Tours 2 The Best of Costa Rica, 2019 After breakfast, we drove towards the volcanic ring of Costa Rica. Circling the slope of Poas volcano, we eventually reached the inspiring Bosque de Paz. With its hummingbird feeders and trails transecting a beautiful moss-covered forest, this lodge offered us the opportunity to see one of Costa Rica´s most difficult-to-see Grallaridae, the Scaled Antpitta. -
About the Book the Format Acknowledgments
About the Book For more than ten years I have been working on a book on bryophyte ecology and was joined by Heinjo During, who has been very helpful in critiquing multiple versions of the chapters. But as the book progressed, the field of bryophyte ecology progressed faster. No chapter ever seemed to stay finished, hence the decision to publish online. Furthermore, rather than being a textbook, it is evolving into an encyclopedia that would be at least three volumes. Having reached the age when I could retire whenever I wanted to, I no longer needed be so concerned with the publish or perish paradigm. In keeping with the sharing nature of bryologists, and the need to educate the non-bryologists about the nature and role of bryophytes in the ecosystem, it seemed my personal goals could best be accomplished by publishing online. This has several advantages for me. I can choose the format I want, I can include lots of color images, and I can post chapters or parts of chapters as I complete them and update later if I find it important. Throughout the book I have posed questions. I have even attempt to offer hypotheses for many of these. It is my hope that these questions and hypotheses will inspire students of all ages to attempt to answer these. Some are simple and could even be done by elementary school children. Others are suitable for undergraduate projects. And some will take lifelong work or a large team of researchers around the world. Have fun with them! The Format The decision to publish Bryophyte Ecology as an ebook occurred after I had a publisher, and I am sure I have not thought of all the complexities of publishing as I complete things, rather than in the order of the planned organization. -
Chile Trip Report April 2015
BIRDING CHILE APRIL 11 – 29, 2015 A BIRDING AND LOGISTICS REPORT We visited Chile at a rather unconventional time, as most birding groups visit the country in the austral spring/summer. This report was mostly written at the time of the trip, but due to an additional 4 months of traveling through the tropics it never was finished. Although this report doesn’t include the depth and breadth of information I originally planned it to have, I decided to publish it anyway. There is very little information available for birding trips to Chile in April, so hopefully this will be helpful to others that decide to travel to the country during the austral fall. For blog posts on the trip (and a lot more pictures) visit the Chile section of Budgetbirders.com TRIP ITINERARY April 11 – Arrived Santiago 0300, SUMMARY departed for Punta Arenas 0800 WHEN and arrived 1630 Most birding groups visit Chile during the austral spring or April 12 – Laguna Los Palos, summer (Nov-Mar) when resident birds are breeding and Route 9, Puerto Natales, Torres migrants are present. Due to schedule constraints we visited Del Paine Chile in the austral fall. Despite not being the prime time of April 13 – Torres Del Paine (Lago year, overall we had a very successful trip. Most of the typical Gray Trail), Sierra Bagueles Chilean target species were still present but we missed April 14 – Route 405, Port several austral migrants, most notably 3 species from Delgada Ferry, Porvenir tyrannidae, White-sided Hillstar, Austral Rail, and Creamy- rumped Miner. April 15 – Laguana Verde, Parque Penguinos Rey TOTAL # OF SPECIES: April 16 – Porvenir, seawatch, Birding highlights included seeing a total of 241 species of ferry to Puenta Arenas which 10 were Chilean endemics. -
ON (19) 617-626.Pdf
SHORT COMMUNICATIONS ORNITOLOGIA NEOTROPICAL 19: 617–625, 2008 © The Neotropical Ornithological Society DIET OF THE GRAYISH SALTATOR (SALTATOR COERULESCENS) IN NORTHEASTERN ARGENTINA Mario L. Chatellenaz Departamento de Biología, Facultad de Ciencias Exactas y Naturales y Agrimensura, Universidad Nacional del Nordeste, Av. Libertad 5470 (3400), Corrientes, Argentina. E-mail: [email protected] Dieta del Pepitero Gris (Saltator coerulescens) en el nordeste de Argentina. Key words: Grayish Saltator, Saltator coerulescens, diet, frugivory, folivory, Argentina. INTRODUCTION component of its diet and, to a lesser extent, leaves, flowers and insects. However, the The Grayish Saltator (Saltator coerulescens) is a number of vegetal species already mentioned species of the Cardinalidae family, distributed is low, and the data come from a few locali- from Central America (Trinidad, Mexico and ties, mainly from the province of Santa Fe. Costa Rica) to western Uruguay and northern In this work, detailed information about Argentina (Ridgely & Tudor 1989). the plant species and the structures that are The existing bibliography referring to consumed by the Grayish Saltator in north- their feeding habits is scarce. In Venezuela, eastern Argentina are given. In addition, other Bosque et al. (1999) made studies on their items registered as part of the feeding are metabolism in relation to folivory; Rodríguez- included. Ferraro et al. (2007) offered a list of species of plants included in the diet and nutritive pref- STUDY AREA AND METHODS erences of this species. Data on the fruits consumed by this species are provided from The data comes from different localities in Mexico (Eguiarte & Martínez del Río, 1985) the provinces of Corrientes, Chaco and For- and Peru (Rosenberg 1990). -
Journal of Avian Biology JAV-00869 Wang, N
Journal of Avian Biology JAV-00869 Wang, N. and Kimball, R. T. 2016. Re-evaluating the distribution of cooperative breeding in birds: is it tightly linked with altriciality? – J. Avian Biol. doi: 10.1111/jav.00869 Supplementary material Appendix 1. Table A1. The characteristics of the 9993 species based on Jetz et al. (2012) Order Species Criteria1 Developmental K K+S K+S+I LB Mode ACCIPITRIFORMES Accipiter albogularis 0 0 0 0 1 ACCIPITRIFORMES Accipiter badius 0 0 0 0 1 ACCIPITRIFORMES Accipiter bicolor 0 0 0 0 1 ACCIPITRIFORMES Accipiter brachyurus 0 0 0 0 1 ACCIPITRIFORMES Accipiter brevipes 0 0 0 0 1 ACCIPITRIFORMES Accipiter butleri 0 0 0 0 1 ACCIPITRIFORMES Accipiter castanilius 0 0 0 0 1 ACCIPITRIFORMES Accipiter chilensis 0 0 0 0 1 ACCIPITRIFORMES Accipiter chionogaster 0 0 0 0 1 ACCIPITRIFORMES Accipiter cirrocephalus 0 0 0 0 1 ACCIPITRIFORMES Accipiter collaris 0 0 0 0 1 ACCIPITRIFORMES Accipiter cooperii 0 0 0 0 1 ACCIPITRIFORMES Accipiter erythrauchen 0 0 0 0 1 ACCIPITRIFORMES Accipiter erythronemius 0 0 0 0 1 ACCIPITRIFORMES Accipiter erythropus 0 0 0 0 1 ACCIPITRIFORMES Accipiter fasciatus 0 0 0 0 1 ACCIPITRIFORMES Accipiter francesiae 0 0 0 0 1 ACCIPITRIFORMES Accipiter gentilis 0 0 0 0 1 ACCIPITRIFORMES Accipiter griseiceps 0 0 0 0 1 ACCIPITRIFORMES Accipiter gularis 0 0 0 0 1 ACCIPITRIFORMES Accipiter gundlachi 0 0 0 0 1 ACCIPITRIFORMES Accipiter haplochrous 0 0 0 0 1 ACCIPITRIFORMES Accipiter henicogrammus 0 0 0 0 1 ACCIPITRIFORMES Accipiter henstii 0 0 0 0 1 ACCIPITRIFORMES Accipiter imitator 0 0 0 0 1 ACCIPITRIFORMES -
Panama's Canopy Lodge: El Valle De Anton (Private) 2018
Field Guides Tour Report Panama's Canopy Lodge: El Valle de Anton (Private) 2018 Mar 18, 2018 to Mar 25, 2018 John Coons & Danilo Rodriguez Jr. For our tour description, itinerary, past triplists, dates, fees, and more, please VISIT OUR TOUR PAGE. This Chestnut-headed Oropendola is looking rather menacing as it eyes David¹s camera. We saw a lot of these at the feeders as well as at the large tree with 30+ nests. Photo by participant David Baker. We had a great week of birding at the very comfortable Canopy Lodge in the cool foothills at El Valle as members of the Mearns Bird Club shook off the cold of Orange County, NY to migrate south to Panama. I did a bit of researching and could not find any reference to Edgar Alexander Mearns spending any time in Panama so you were all representing the name well as we birded wet and dry forests, open pastures, a large city park, coastal lowlands and marshes. Except for our day birding the Rio Indio and Jordanal area where we had a day of rain the weather was spot on, not too hot and fairly dry. Even on our wet day we did quite well with the specialties we searched for. Highlights of the trip were many and included those Crested Bobwhites walking right across the road at Juan Hombron, great views of several Swallow- tailed Kites, a wonderful Spectacled Owl on a day perch, the Common Potoo on its branch, perhaps on a nest, finally getting our White-tipped Sicklebill, the thin-tailed male Green Thorntail, the very fancy and diminutive Rufous-crested Coquette, scope views of the rare Snowcap, Orange-bellied Trogon, five species of motmots including our Tody Motmot, Barred Puffbird being harassed by a few hummingbirds, great looks at Keel-billed Toucans, our good view of Dull-mantled Antbird, a cooperative Long-tailed Tyrant exposed on a broken limb, Lance-tailed and Golden-collared manakins, the great look at the Rosy Thrush-Tanager, seeing a few Golden-winged Warblers getting ready to head north, and the Crested Oropendolas working at their nests, among many others. -
Classic Colombia
Visiting a colony of Black Oropendolas was one of the highlights of the trip (Trevor Ellery) CLASSIC COLOMBIA 24 FEBRUARY – 15 MARCH 2019 LEADER: TREVOR ELLERY The 2019 BirdQuest classic Colombia tour was supremely successful, not just in that we saw almost all the target species but in that we also managed to add in a few special surprises. In total we recorded 702 species, including 58 endemics and a wealth of specialities. Among the endemics, we logged pretty much all the available Santa Marta species. Our list of specialties is almost as long and mouthwatering, including such species as Yellow-headed Manakin, Military Macaw, Black Oropendola, Grey-cheeked Nunlet, Noble Snipe, Blue-throated Starfrontlet, Wattled Guan, Dwarf Cuckoo, Hooded Antpitta, Masked Mountain Tanager, Chestnut-crested Cotinga, Tocuyo Sparrow, Tanager Finch and Masked Saltator. It really was a superbly birdy tour and of course filled with stunning scenery and remarkably diverse habitats. We crisscrossed the country, taking in three Andean cordilleras, two deep and endemic rich valleys and the isolated sky island, formed by the Santa Marta Mountains. We also visited the arid scrub semi desert of the 1 BirdQuest Tour Report: Classic Colombia 2019 www.birdquest-tours.com Guajira and the rich wetlands of the Caribbean coast. We of course enjoyed the wonderfully friendly Colombians we met along the way and managed to add in a few memorable mammal encounters too. We enjoyed fantastic views of Red-rumped Bush Tyrant on our first day (Trevor Ellery) Our tour started with an early morning visit to Paramo Sumapaz, the largest Paramo in the world. -
Alpha Codes for 2168 Bird Species (And 113 Non-Species Taxa) in Accordance with the 62Nd AOU Supplement (2021), Sorted Taxonomically
Four-letter (English Name) and Six-letter (Scientific Name) Alpha Codes for 2168 Bird Species (and 113 Non-Species Taxa) in accordance with the 62nd AOU Supplement (2021), sorted taxonomically Prepared by Peter Pyle and David F. DeSante The Institute for Bird Populations www.birdpop.org ENGLISH NAME 4-LETTER CODE SCIENTIFIC NAME 6-LETTER CODE Highland Tinamou HITI Nothocercus bonapartei NOTBON Great Tinamou GRTI Tinamus major TINMAJ Little Tinamou LITI Crypturellus soui CRYSOU Thicket Tinamou THTI Crypturellus cinnamomeus CRYCIN Slaty-breasted Tinamou SBTI Crypturellus boucardi CRYBOU Choco Tinamou CHTI Crypturellus kerriae CRYKER White-faced Whistling-Duck WFWD Dendrocygna viduata DENVID Black-bellied Whistling-Duck BBWD Dendrocygna autumnalis DENAUT West Indian Whistling-Duck WIWD Dendrocygna arborea DENARB Fulvous Whistling-Duck FUWD Dendrocygna bicolor DENBIC Emperor Goose EMGO Anser canagicus ANSCAN Snow Goose SNGO Anser caerulescens ANSCAE + Lesser Snow Goose White-morph LSGW Anser caerulescens caerulescens ANSCCA + Lesser Snow Goose Intermediate-morph LSGI Anser caerulescens caerulescens ANSCCA + Lesser Snow Goose Blue-morph LSGB Anser caerulescens caerulescens ANSCCA + Greater Snow Goose White-morph GSGW Anser caerulescens atlantica ANSCAT + Greater Snow Goose Intermediate-morph GSGI Anser caerulescens atlantica ANSCAT + Greater Snow Goose Blue-morph GSGB Anser caerulescens atlantica ANSCAT + Snow X Ross's Goose Hybrid SRGH Anser caerulescens x rossii ANSCAR + Snow/Ross's Goose SRGO Anser caerulescens/rossii ANSCRO Ross's Goose -
University of Copenhagen
A striking, critically endangered, new species of hillstar (Trochilidae: Oreotrochilus) from the southwestern Andes of Ecuador Sornoza-molina, Francisco; Freile, Juan F.; Nilsson, Jonas; Krabbe, Niels; Bonaccorso, Elisa Published in: The Auk: Ornithological Advances DOI: 10.1642/AUK-18-58.1 Publication date: 2018 Document version Publisher's PDF, also known as Version of record Document license: CC BY-NC Citation for published version (APA): Sornoza-molina, F., Freile, J. F., Nilsson, J., Krabbe, N., & Bonaccorso, E. (2018). A striking, critically endangered, new species of hillstar (Trochilidae: Oreotrochilus) from the southwestern Andes of Ecuador. The Auk: Ornithological Advances, 135(4), 1146-1171. https://doi.org/10.1642/AUK-18-58.1 Download date: 29. Sep. 2021 A striking, critically endangered, new species of hillstar (Trochilidae: Oreotrochilus) from the southwestern Andes of Ecuador Author(s): Francisco Sornoza-Molina, Juan F. Freile, Jonas Nilsson, Niels Krabbe, and Elisa Bonaccorso Source: The Auk, 135(4):1146-1171. Published By: American Ornithological Society https://doi.org/10.1642/AUK-18-58.1 URL: http://www.bioone.org/doi/full/10.1642/AUK-18-58.1 BioOne (www.bioone.org) is a nonprofit, online aggregation of core research in the biological, ecological, and environmental sciences. BioOne provides a sustainable online platform for over 170 journals and books published by nonprofit societies, associations, museums, institutions, and presses. Your use of this PDF, the BioOne Web site, and all posted and associated content indicates your acceptance of BioOne’s Terms of Use, available at www.bioone.org/page/terms_of_use. Usage of BioOne content is strictly limited to personal, educational, and non-commercial use. -
Herrera Et Al.Fm
ORNITOLOGIA NEOTROPICAL 15 (Suppl.): 215–222, 2004 © The Neotropical Ornithological Society SISTEMA VISUAL EN EL COLIBRÍ AUSTRAL (SEPHANOIDES SEPHANIODES) Y EL PICAFLOR CORDILLERANO (OREOTROCHILUS LEUCOPLEURUS): ELECTRORRETINOGRAFIA Y COLORACIÓN Gonzalo Herrera1, Maria José Fernández2, Nélida Pohl3, Marcelo Diaz1, Francisco Bozinovic2 & Adrián Palacios1,4 1Centro de Neurociencia de Valparaíso, Departamento de Fisiología, Facultad de Ciencias, Universidad de Valparaíso, P. O. 5030, Valparaíso, Chile. 2Centro de Estudios Avanzados en Ecología & Biodiversidad, Departamento de Ecología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago, Chile. 3Department of Ecology and Evolutionary Biology, University of California, Irvine, California. Abstract. – Visual system in the Green-backed Firecrown (Sephanoides sephaniodes) and the White- sided Hillstar (Oreotrochilus leucopterus): electroretinography and color. – Most avian groups have trichromatic and tetrachromatic color vision. Since some flowers are known to exhibit UV-specific color patterns, UV vision might be important in identifying them as food resources. Previous studies indicated that some trochilids have four cone types, with the corresponding visual pigments, including one which is sensitive to ultraviolet light (325–360 nm). However, in a few hummingbird species, a high preference for red color has been reported. Therefore, there is no consensus in the color mechanism that participates in food selection. Here, we study the electroretinograms (ERG) from five (male and female) Green-backed Firecrowns (Sephanoides sephaniodes) and one White-sided Hillstar (Oreotrochilus leucopleurus). These humming- birds are most sensitive to approximately 560 nm and have low UV sensitivity. Most flowers on which these hummingbirds forage are yellow, orange and red, with low UV reflectance. Their spectral sensitivity is tied to their double and single cones and their oil droplets which act as color filters.